Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68687.t1 | PNY02552.1 | 43.2 | 750 | 142 | 7 | 154 | 674 | 1 | 695 | 1.80E-132 | 483.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68687.t1 | Q9SZL8 | 34.9 | 232 | 140 | 7 | 4 | 226 | 35 | 264 | 3.7e-22 | 108.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68687.t1 | A0A2K3NHN1 | 43.2 | 750 | 142 | 7 | 154 | 674 | 1 | 695 | 1.3e-132 | 483.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene68687.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68687.t1 | MTR_7g446520 | 39.496 | 238 | 119 | 3 | 6 | 234 | 47 | 268 | 5.31e-45 | 164 |
MS.gene68687.t1 | MTR_7g446480 | 49.180 | 122 | 62 | 0 | 113 | 234 | 140 | 261 | 3.00e-33 | 130 |
MS.gene68687.t1 | MTR_8g035530 | 77.632 | 76 | 16 | 1 | 28 | 102 | 1 | 76 | 6.86e-32 | 119 |
MS.gene68687.t1 | MTR_7g446510 | 50.000 | 116 | 58 | 0 | 113 | 228 | 155 | 270 | 1.27e-31 | 126 |
MS.gene68687.t1 | MTR_7g028855 | 43.421 | 152 | 81 | 1 | 33 | 179 | 112 | 263 | 1.35e-30 | 126 |
MS.gene68687.t1 | MTR_5g076070 | 27.451 | 204 | 139 | 4 | 38 | 236 | 50 | 249 | 5.89e-24 | 102 |
MS.gene68687.t1 | MTR_1g070355 | 31.188 | 202 | 128 | 4 | 41 | 236 | 74 | 270 | 6.37e-24 | 107 |
MS.gene68687.t1 | MTR_3g080590 | 53.488 | 86 | 40 | 0 | 5 | 90 | 69 | 154 | 2.97e-23 | 97.1 |
MS.gene68687.t1 | MTR_6g022080 | 28.655 | 171 | 115 | 2 | 34 | 198 | 78 | 247 | 3.24e-20 | 91.3 |
MS.gene68687.t1 | MTR_0402s0040 | 27.347 | 245 | 153 | 7 | 45 | 268 | 30 | 270 | 1.32e-18 | 90.1 |
MS.gene68687.t1 | MTR_6g051425 | 27.273 | 198 | 135 | 4 | 40 | 229 | 16 | 212 | 2.37e-18 | 87.4 |
MS.gene68687.t1 | MTR_0645s0010 | 51.220 | 82 | 39 | 1 | 230 | 311 | 45 | 125 | 4.79e-17 | 78.2 |
MS.gene68687.t1 | MTR_7g061980 | 35.780 | 109 | 64 | 2 | 44 | 148 | 13 | 119 | 9.94e-15 | 71.6 |
MS.gene68687.t1 | MTR_1g008290 | 29.197 | 137 | 86 | 3 | 81 | 217 | 1 | 126 | 1.92e-13 | 68.6 |
MS.gene68687.t1 | MTR_5g015480 | 32.308 | 130 | 81 | 3 | 45 | 167 | 60 | 189 | 2.22e-12 | 68.2 |
MS.gene68687.t1 | MTR_8g468460 | 37.234 | 94 | 58 | 1 | 231 | 324 | 13 | 105 | 4.16e-12 | 63.5 |
MS.gene68687.t1 | MTR_4g067290 | 34.000 | 100 | 64 | 2 | 44 | 141 | 59 | 158 | 6.63e-12 | 66.2 |
MS.gene68687.t1 | MTR_4g067290 | 34.000 | 100 | 64 | 2 | 44 | 141 | 59 | 158 | 6.90e-12 | 66.2 |
MS.gene68687.t1 | MTR_4g067290 | 34.000 | 100 | 64 | 2 | 44 | 141 | 79 | 178 | 1.08e-11 | 66.2 |
MS.gene68687.t1 | MTR_4g067290 | 34.000 | 100 | 64 | 2 | 44 | 141 | 77 | 176 | 1.11e-11 | 66.2 |
MS.gene68687.t1 | MTR_4g067290 | 34.000 | 100 | 64 | 2 | 44 | 141 | 79 | 178 | 1.16e-11 | 66.2 |
MS.gene68687.t1 | MTR_2g098920 | 34.579 | 107 | 68 | 2 | 39 | 143 | 78 | 184 | 1.31e-11 | 65.9 |
MS.gene68687.t1 | MTR_4g067290 | 34.000 | 100 | 64 | 2 | 44 | 141 | 119 | 218 | 1.49e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68687.t1 | AT4G38180 | 32.491 | 277 | 154 | 9 | 2 | 247 | 32 | 306 | 5.62e-24 | 108 |
MS.gene68687.t1 | AT4G38180 | 30.000 | 140 | 97 | 1 | 230 | 369 | 500 | 638 | 5.30e-14 | 76.3 |
MS.gene68687.t1 | AT3G07500 | 37.500 | 136 | 73 | 5 | 16 | 141 | 3 | 136 | 4.31e-15 | 75.5 |
MS.gene68687.t1 | AT4G38170 | 29.412 | 136 | 95 | 1 | 230 | 365 | 265 | 399 | 1.53e-13 | 74.3 |
MS.gene68687.t1 | AT2G27110 | 29.412 | 136 | 95 | 1 | 230 | 365 | 445 | 579 | 5.90e-12 | 69.7 |
MS.gene68687.t1 | AT2G27110 | 29.412 | 136 | 95 | 1 | 230 | 365 | 445 | 579 | 5.90e-12 | 69.7 |
MS.gene68687.t1 | AT2G27110 | 29.412 | 136 | 95 | 1 | 230 | 365 | 300 | 434 | 8.10e-12 | 68.9 |
MS.gene68687.t1 | AT3G59470 | 34.579 | 107 | 68 | 2 | 39 | 143 | 68 | 174 | 8.60e-12 | 66.2 |
MS.gene68687.t1 | AT3G59470 | 34.579 | 107 | 68 | 2 | 39 | 143 | 68 | 174 | 8.60e-12 | 66.2 |
MS.gene68687.t1 | AT3G59470 | 34.579 | 107 | 68 | 2 | 39 | 143 | 80 | 186 | 1.08e-11 | 66.2 |
MS.gene68687.t1 | AT4G12850 | 36.522 | 115 | 68 | 3 | 39 | 152 | 9 | 119 | 1.92e-11 | 62.8 |
MS.gene68687.t1 | AT4G12850 | 38.235 | 102 | 61 | 2 | 39 | 139 | 9 | 109 | 3.80e-11 | 62.0 |
MS.gene68687.t1 | AT1G10240 | 28.916 | 166 | 109 | 5 | 44 | 200 | 51 | 216 | 4.87e-11 | 66.6 |
MS.gene68687.t1 | AT1G10240 | 28.916 | 166 | 109 | 5 | 44 | 200 | 51 | 216 | 4.87e-11 | 66.6 |
MS.gene68687.t1 | AT5G18960 | 25.980 | 204 | 147 | 3 | 211 | 413 | 575 | 775 | 5.87e-11 | 66.2 |
MS.gene68687.t1 | AT5G18960 | 25.980 | 204 | 147 | 3 | 211 | 413 | 575 | 775 | 5.87e-11 | 66.2 |
Find 132 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTAATAAGTGGAGAGTTTC+TGG | 0.119642 | 2.3:+39050155 | MS.gene68687:CDS |
TGTTAGAACCTGTCATATTT+TGG | 0.145212 | 2.3:+39050295 | MS.gene68687:CDS |
GTCTCATGGCACAAATAATA+TGG | 0.183652 | 2.3:-39051483 | None:intergenic |
GTAATCATCCTTTGCTGATT+TGG | 0.196309 | 2.3:-39051554 | None:intergenic |
CATCTTTCCATGTTACATTT+TGG | 0.217563 | 2.3:-39052459 | None:intergenic |
AGTTGTCTGCTCGTGGAAAT+TGG | 0.230194 | 2.3:-39052621 | None:intergenic |
CTCTATTTATGTTAGTTTAT+GGG | 0.247034 | 2.3:+39052783 | MS.gene68687:intron |
AAAGTAGATGCAATTTGATT+TGG | 0.270824 | 2.3:-39052559 | None:intergenic |
AAAATTGATGCACCTTGATT+TGG | 0.276898 | 2.3:-39052595 | None:intergenic |
AAGACCAATCCATCCGTTAT+TGG | 0.279284 | 2.3:+39051769 | MS.gene68687:CDS |
TCACTCAATTGACGGTTCTT+AGG | 0.285255 | 2.3:-39050233 | None:intergenic |
TTGGCGCCTGTAAAATAATT+AGG | 0.301126 | 2.3:-39052496 | None:intergenic |
CATTCAAGTTCTGTTGGATA+TGG | 0.304475 | 2.3:+39052652 | MS.gene68687:CDS |
CCTTTGGCCTTGGCTTTGAT+AGG | 0.324333 | 2.3:-39051796 | None:intergenic |
TTGCTTGTGATTCGAGAGTT+TGG | 0.328361 | 2.3:-39052865 | None:intergenic |
ATACAGGCACAAAGAGTTAA+TGG | 0.341245 | 2.3:+39051171 | MS.gene68687:CDS |
GTTGTCTGCTCGTGGAAATT+GGG | 0.345810 | 2.3:-39052620 | None:intergenic |
ACGAGGGGCACCTTTGGCCT+TGG | 0.345904 | 2.3:-39051806 | None:intergenic |
TGAAGAAGGAAAAGAGGATA+TGG | 0.353695 | 2.3:+39049851 | MS.gene68687:CDS |
TGGATACTTACAAGAAGATT+AGG | 0.354642 | 2.3:+39049871 | MS.gene68687:CDS |
TCCAACCCGTTATGCTCATT+TGG | 0.356553 | 2.3:+39050208 | MS.gene68687:CDS |
TGCTGCGTTGAGTTATTTGC+AGG | 0.361206 | 2.3:+39050430 | MS.gene68687:CDS |
GAAAGGAGGTCATGAGAGTC+TGG | 0.365097 | 2.3:+39050334 | MS.gene68687:CDS |
ATAGCCTCTTTATAATCATC+TGG | 0.369789 | 2.3:-39051685 | None:intergenic |
AGACATAAATGGTGAAGATT+TGG | 0.373826 | 2.3:+39049806 | MS.gene68687:CDS |
GCAATTTGATTTGGAAATTG+AGG | 0.377041 | 2.3:-39052550 | None:intergenic |
CTTCTTACGAGGGGCACCTT+TGG | 0.378868 | 2.3:-39051812 | None:intergenic |
AAGATCGGAACACTTTGAAT+TGG | 0.379246 | 2.3:-39052526 | None:intergenic |
GCAAACGATGGAGACATAAA+TGG | 0.387588 | 2.3:+39049795 | MS.gene68687:CDS |
ACATCACGTCTAGCTAGTTC+TGG | 0.389126 | 2.3:-39051904 | None:intergenic |
AAGTTTAAGATGAATAGATT+TGG | 0.423772 | 2.3:+39051364 | MS.gene68687:CDS |
CTGATAGTCTAATTTGCAAA+AGG | 0.431391 | 2.3:+39051527 | MS.gene68687:CDS |
TCTGATAAAGCCCTTGTTGA+TGG | 0.437123 | 2.3:+39050257 | MS.gene68687:CDS |
TATCAGATTCACTCAATTGA+CGG | 0.439464 | 2.3:-39050241 | None:intergenic |
CCATCACATTCAAGTTCTGT+TGG | 0.440650 | 2.3:+39052646 | MS.gene68687:CDS |
TGTAGACAGTTTGAACGGAT+TGG | 0.441359 | 2.3:+39051448 | MS.gene68687:CDS |
GAAGATTTGGCCAGCGGTAA+TGG | 0.442024 | 2.3:+39049819 | MS.gene68687:CDS |
GAAGGAAAGGCAAGAATAGA+AGG | 0.447532 | 2.3:+39050395 | MS.gene68687:CDS |
AGAAGAAATCATCCAGGAAA+AGG | 0.463612 | 2.3:+39051833 | MS.gene68687:CDS |
GGATACTTACAAGAAGATTA+GGG | 0.465987 | 2.3:+39049872 | MS.gene68687:CDS |
CAAGAAGATTAGGGAATTGA+CGG | 0.467663 | 2.3:+39049881 | MS.gene68687:CDS |
AGGAACCAAATGAGCATAAC+GGG | 0.471013 | 2.3:-39050213 | None:intergenic |
ACTCAAAATTATCATCACTT+TGG | 0.472391 | 2.3:-39052900 | None:intergenic |
CAATAAAAGAAGATCAAAAC+AGG | 0.473627 | 2.3:+39052151 | MS.gene68687:CDS |
ATTTATGTCTCCATCGTTTG+CGG | 0.473976 | 2.3:-39049793 | None:intergenic |
TAAATGTTGATACTAATAAG+TGG | 0.482914 | 2.3:+39050144 | MS.gene68687:CDS |
TGTCAATGTTACTTCAATGC+AGG | 0.488636 | 2.3:+39052121 | MS.gene68687:CDS |
GTTTATGGGTGCATTGGAGA+TGG | 0.488948 | 2.3:+39052797 | MS.gene68687:intron |
ATAGAGCTGTAAAAGAATAC+AGG | 0.492679 | 2.3:+39051155 | MS.gene68687:intron |
AACTCTCGAATCACAAGCAA+TGG | 0.493257 | 2.3:+39052868 | MS.gene68687:CDS |
TCTCATGGCACAAATAATAT+GGG | 0.494840 | 2.3:-39051482 | None:intergenic |
GGATGATGATATAAGAGGAT+TGG | 0.496802 | 2.3:+39049902 | MS.gene68687:CDS |
TTGACGGATGATGATATAAG+AGG | 0.497315 | 2.3:+39049897 | MS.gene68687:CDS |
GAAATCTATGCAGATTGTCA+TGG | 0.498853 | 2.3:+39049960 | MS.gene68687:CDS |
ATGTTAGTTTATGGGTGCAT+TGG | 0.499575 | 2.3:+39052791 | MS.gene68687:intron |
TATAACTACTTATACAATGA+AGG | 0.501991 | 2.3:+39050377 | MS.gene68687:CDS |
TTGCACTAGATTGAAAATGA+AGG | 0.505947 | 2.3:+39052236 | MS.gene68687:intron |
TTTGGAAATTGAGGAAAGAT+CGG | 0.506335 | 2.3:-39052541 | None:intergenic |
AGGATTGGAATTTGATTCAG+AGG | 0.508865 | 2.3:+39049917 | MS.gene68687:CDS |
GATGTAAACAAAGATGATGA+TGG | 0.508994 | 2.3:+39050002 | MS.gene68687:CDS |
TAGATTGAAAATGAAGGGAT+TGG | 0.509056 | 2.3:+39052242 | MS.gene68687:intron |
ATTAAACACGCCATTACCGC+TGG | 0.509907 | 2.3:-39049829 | None:intergenic |
GTATCTAGTTCAGCTTGATA+AGG | 0.514742 | 2.3:+39051402 | MS.gene68687:CDS |
ATCACCAATAACGGATGGAT+TGG | 0.524490 | 2.3:-39051773 | None:intergenic |
AGATGATTATAAAGAGGCTA+TGG | 0.524840 | 2.3:+39051687 | MS.gene68687:CDS |
TTGTCTGCTCGTGGAAATTG+GGG | 0.529245 | 2.3:-39052619 | None:intergenic |
AGAAACAAAGTACATATTCG+AGG | 0.529955 | 2.3:+39050078 | MS.gene68687:CDS |
ACTTTGAATTGGAACACCGT+TGG | 0.530199 | 2.3:-39052515 | None:intergenic |
AGTGATGTGCTCGTGTCTCA+TGG | 0.530669 | 2.3:-39051497 | None:intergenic |
TGCAGATTGTCATGGGTTTG+TGG | 0.531824 | 2.3:+39049968 | MS.gene68687:CDS |
AAATCTATGCAGATTGTCAT+GGG | 0.533515 | 2.3:+39049961 | MS.gene68687:CDS |
ATAGTCTAATTTGCAAAAGG+TGG | 0.533689 | 2.3:+39051530 | MS.gene68687:CDS |
GAAAGGCAAGAATAGAAGGT+GGG | 0.534127 | 2.3:+39050399 | MS.gene68687:CDS |
CAACAGAACTTGAATGTGAT+GGG | 0.534436 | 2.3:-39052645 | None:intergenic |
CAAAATGTAACATGGAAAGA+TGG | 0.535009 | 2.3:+39052460 | MS.gene68687:CDS |
CCAACAGAACTTGAATGTGA+TGG | 0.535015 | 2.3:-39052646 | None:intergenic |
ATTTAAATGGCCGCAAACGA+TGG | 0.539363 | 2.3:+39049783 | None:intergenic |
TGCAGAACACTTAGTTCGAA+TGG | 0.539821 | 2.3:-39050105 | None:intergenic |
TGCACTAGATTGAAAATGAA+GGG | 0.542557 | 2.3:+39052237 | MS.gene68687:intron |
TAGGAACCAAATGAGCATAA+CGG | 0.549503 | 2.3:-39050214 | None:intergenic |
CATAAAACCCAAAATATGAC+AGG | 0.552239 | 2.3:-39050303 | None:intergenic |
ACACCCAGATGATTATAAAG+AGG | 0.558171 | 2.3:+39051681 | MS.gene68687:CDS |
AATGGCGTGTTTAATGAAGA+AGG | 0.560249 | 2.3:+39049837 | MS.gene68687:CDS |
AATGTCCAGAGTCAAGATCA+AGG | 0.560616 | 2.3:+39052400 | MS.gene68687:intron |
TTTGATAGGATCACCAATAA+CGG | 0.561695 | 2.3:-39051782 | None:intergenic |
ACTCTCGAATCACAAGCAAT+GGG | 0.562552 | 2.3:+39052869 | MS.gene68687:CDS |
AAAGGCAAGAATAGAAGGTG+GGG | 0.563747 | 2.3:+39050400 | MS.gene68687:CDS |
ATGATTTCTTCTTCTTACGA+GGG | 0.564434 | 2.3:-39051822 | None:intergenic |
TGATTATAAAGAGGCTATGG+AGG | 0.565059 | 2.3:+39051690 | MS.gene68687:CDS |
GTTTAATGAAGAAGGAAAAG+AGG | 0.565717 | 2.3:+39049845 | MS.gene68687:CDS |
TGTAACTTTGTTGTCAACAC+AGG | 0.566833 | 2.3:-39051220 | None:intergenic |
GATGATTTCTTCTTCTTACG+AGG | 0.568426 | 2.3:-39051823 | None:intergenic |
TAGCCTCTTTATAATCATCT+GGG | 0.570856 | 2.3:-39051684 | None:intergenic |
TCTAAATGAAGTCAATGAAG+AGG | 0.571099 | 2.3:+39051927 | MS.gene68687:CDS |
ATAGGATCACCAATAACGGA+TGG | 0.579076 | 2.3:-39051778 | None:intergenic |
AACGGGTTGGAGTTAACTCA+TGG | 0.579913 | 2.3:-39050196 | None:intergenic |
CTACTTATACAATGAAGGAA+AGG | 0.581665 | 2.3:+39050382 | MS.gene68687:CDS |
ATGTAAACAAAGATGATGAT+GGG | 0.584402 | 2.3:+39050003 | MS.gene68687:CDS |
GTGATTGTAGACAGTTTGAA+CGG | 0.585179 | 2.3:+39051443 | MS.gene68687:CDS |
GTTGATGGTCTTCACGCACA+CGG | 0.587234 | 2.3:+39050272 | MS.gene68687:CDS |
AGTTAACTCATGGTTGTGTG+AGG | 0.591294 | 2.3:-39050186 | None:intergenic |
GATTATAAAGAGGCTATGGA+GGG | 0.593735 | 2.3:+39051691 | MS.gene68687:CDS |
GGAAAGGCAAGAATAGAAGG+TGG | 0.594681 | 2.3:+39050398 | MS.gene68687:CDS |
ACCAAATGAGCATAACGGGT+TGG | 0.596668 | 2.3:-39050209 | None:intergenic |
TCGATTAGTATGTAATAGAG+AGG | 0.600970 | 2.3:+39050040 | MS.gene68687:CDS |
ATAAAGAGGCGTCGTGAGAG+TGG | 0.603066 | 2.3:+39051736 | MS.gene68687:CDS |
GTTTGTGTGAGAAAATAAAG+AGG | 0.607012 | 2.3:+39051722 | MS.gene68687:CDS |
TGTTGACAACAAAGTTACAC+AGG | 0.607980 | 2.3:+39051224 | MS.gene68687:CDS |
CCTATCAAAGCCAAGGCCAA+AGG | 0.609665 | 2.3:+39051796 | MS.gene68687:CDS |
TTTATGATGGCTCAGAAAGG+AGG | 0.609928 | 2.3:+39050320 | MS.gene68687:CDS |
AAAATGGATAAGAATACATG+TGG | 0.610891 | 2.3:+39052831 | MS.gene68687:CDS |
AAAGGAGGTCATGAGAGTCT+GGG | 0.612373 | 2.3:+39050335 | MS.gene68687:CDS |
TGGAAGACCAAAATGTAACA+TGG | 0.612794 | 2.3:+39052452 | MS.gene68687:CDS |
GTGTTGATAAGAGTTGTGAC+AGG | 0.616075 | 2.3:+39052081 | MS.gene68687:CDS |
TACTCACAGGTGTATGATGA+GGG | 0.616777 | 2.3:-39052690 | None:intergenic |
TGGTGATCCTATCAAAGCCA+AGG | 0.618217 | 2.3:+39051789 | MS.gene68687:CDS |
GATGGGAAGTTGTCTGCTCG+TGG | 0.621816 | 2.3:-39052628 | None:intergenic |
GTAAGAAGAAGAAATCATCC+AGG | 0.628639 | 2.3:+39051827 | MS.gene68687:CDS |
GTTAACTCATGGTTGTGTGA+GGG | 0.630795 | 2.3:-39050185 | None:intergenic |
TGATTTCTTCTTCTTACGAG+GGG | 0.631063 | 2.3:-39051821 | None:intergenic |
GTGCGTGAAGACCATCAACA+AGG | 0.635936 | 2.3:-39050268 | None:intergenic |
CGATTAGTATGTAATAGAGA+GGG | 0.642038 | 2.3:+39050041 | MS.gene68687:CDS |
GCACAAATAATATGGGAACA+TGG | 0.643217 | 2.3:-39051475 | None:intergenic |
ATACTCACAGGTGTATGATG+AGG | 0.644284 | 2.3:-39052691 | None:intergenic |
AAGGTGGACCAAATCAGCAA+AGG | 0.645642 | 2.3:+39051546 | MS.gene68687:CDS |
ATTATAAAGAGGCTATGGAG+GGG | 0.655805 | 2.3:+39051692 | MS.gene68687:CDS |
TTCGAACTAAGTGTTCTGCA+AGG | 0.661356 | 2.3:+39050108 | MS.gene68687:CDS |
CAGTAGACATAGTTCCTCGA+CGG | 0.666039 | 2.3:-39051627 | None:intergenic |
TGCGTGAAGACCATCAACAA+GGG | 0.673392 | 2.3:-39050267 | None:intergenic |
AATGGTGAAGATTTGGCCAG+CGG | 0.682068 | 2.3:+39049813 | MS.gene68687:CDS |
AAAATGTTCATGTTCCGTCG+AGG | 0.700917 | 2.3:+39051613 | MS.gene68687:CDS |
TGTCTGCTCGTGGAAATTGG+GGG | 0.731356 | 2.3:-39052618 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTAGAAAATTTATTTTGGT+CGG | + | chr2.3:39050511-39050530 | MS.gene68687:intron | 15.0% |
!! | ATAATTAGCATAAATCAATG+AGG | - | chr2.3:39050903-39050922 | None:intergenic | 20.0% |
!! | TAAATGTTGATACTAATAAG+TGG | + | chr2.3:39050144-39050163 | MS.gene68687:CDS | 20.0% |
!! | TATAACTACTTATACAATGA+AGG | + | chr2.3:39050377-39050396 | MS.gene68687:CDS | 20.0% |
!!! | AAGTTTAAGATGAATAGATT+TGG | + | chr2.3:39051364-39051383 | MS.gene68687:CDS | 20.0% |
!!! | AATTATAATTTGTTTGCACA+GGG | + | chr2.3:39052059-39052078 | MS.gene68687:intron | 20.0% |
!!! | CTCTATTTATGTTAGTTTAT+GGG | + | chr2.3:39052783-39052802 | MS.gene68687:intron | 20.0% |
!!! | GACGTTTAGAAAATTTATTT+TGG | + | chr2.3:39050507-39050526 | MS.gene68687:intron | 20.0% |
!!! | TAATTATAATTTGTTTGCAC+AGG | + | chr2.3:39052058-39052077 | MS.gene68687:intron | 20.0% |
!!! | TATGTTCCTAATTATTTTAC+AGG | + | chr2.3:39052490-39052509 | MS.gene68687:CDS | 20.0% |
!!! | TCTCTATTTATGTTAGTTTA+TGG | + | chr2.3:39052782-39052801 | MS.gene68687:intron | 20.0% |
! | AAAATGGATAAGAATACATG+TGG | + | chr2.3:39052831-39052850 | MS.gene68687:CDS | 25.0% |
! | AAAGTAGATGCAATTTGATT+TGG | - | chr2.3:39052562-39052581 | None:intergenic | 25.0% |
! | ACAATTTATCAGACAATACA+TGG | + | chr2.3:39050969-39050988 | MS.gene68687:intron | 25.0% |
! | AGTAGTTTCTCATAGTTAAT+TGG | + | chr2.3:39052320-39052339 | MS.gene68687:intron | 25.0% |
! | ATGTAAACAAAGATGATGAT+GGG | + | chr2.3:39050003-39050022 | MS.gene68687:CDS | 25.0% |
! | CAATAAAAGAAGATCAAAAC+AGG | + | chr2.3:39052151-39052170 | MS.gene68687:CDS | 25.0% |
! | CAATTTATCAGACAATACAT+GGG | + | chr2.3:39050970-39050989 | MS.gene68687:intron | 25.0% |
!! | GAAAATTCTTCCAAGAATTT+TGG | - | chr2.3:39050881-39050900 | None:intergenic | 25.0% |
!! | TTATCTGTCATGTTTTCATT+AGG | - | chr2.3:39052272-39052291 | None:intergenic | 25.0% |
!!! | AAGATACTTGATACTTTTTG+TGG | + | chr2.3:39052180-39052199 | MS.gene68687:intron | 25.0% |
!!! | TCATATTTTGGGTTTTATGA+TGG | + | chr2.3:39050307-39050326 | MS.gene68687:CDS | 25.0% |
AAAATTGATGCACCTTGATT+TGG | - | chr2.3:39052598-39052617 | None:intergenic | 30.0% | |
AAATCTATGCAGATTGTCAT+GGG | + | chr2.3:39049961-39049980 | MS.gene68687:CDS | 30.0% | |
AAATTATAGTTCCTCCATGA+TGG | - | chr2.3:39050646-39050665 | None:intergenic | 30.0% | |
AAGCTTCAAAAATCTTTACG+AGG | + | chr2.3:39051257-39051276 | MS.gene68687:CDS | 30.0% | |
AGAAACAAAGTACATATTCG+AGG | + | chr2.3:39050078-39050097 | MS.gene68687:CDS | 30.0% | |
AGACATAAATGGTGAAGATT+TGG | + | chr2.3:39049806-39049825 | MS.gene68687:CDS | 30.0% | |
AGATGATTATAAAGAGGCTA+TGG | + | chr2.3:39051687-39051706 | MS.gene68687:CDS | 30.0% | |
ATAGAGCTGTAAAAGAATAC+AGG | + | chr2.3:39051155-39051174 | MS.gene68687:intron | 30.0% | |
ATAGCCTCTTTATAATCATC+TGG | - | chr2.3:39051688-39051707 | None:intergenic | 30.0% | |
ATATGAGATGAAGACAATGT+GGG | + | chr2.3:39051003-39051022 | MS.gene68687:intron | 30.0% | |
ATGATTTCTTCTTCTTACGA+GGG | - | chr2.3:39051825-39051844 | None:intergenic | 30.0% | |
CAAAAACACATTTAACACGA+TGG | - | chr2.3:39052008-39052027 | None:intergenic | 30.0% | |
CAAAATGTAACATGGAAAGA+TGG | + | chr2.3:39052460-39052479 | MS.gene68687:CDS | 30.0% | |
CATAAAACCCAAAATATGAC+AGG | - | chr2.3:39050306-39050325 | None:intergenic | 30.0% | |
CGATTAGTATGTAATAGAGA+GGG | + | chr2.3:39050041-39050060 | MS.gene68687:CDS | 30.0% | |
CTACTTATACAATGAAGGAA+AGG | + | chr2.3:39050382-39050401 | MS.gene68687:CDS | 30.0% | |
CTCAATTTCAAATTTGTCCA+CGG | - | chr2.3:39050927-39050946 | None:intergenic | 30.0% | |
GATGTAAACAAAGATGATGA+TGG | + | chr2.3:39050002-39050021 | MS.gene68687:CDS | 30.0% | |
GATTTATGCTAATTATACCG+TGG | + | chr2.3:39050907-39050926 | MS.gene68687:intron | 30.0% | |
GGATACTTACAAGAAGATTA+GGG | + | chr2.3:39049872-39049891 | MS.gene68687:CDS | 30.0% | |
GTAAACTTCGAAAAGAACAT+TGG | - | chr2.3:39050473-39050492 | None:intergenic | 30.0% | |
GTTTAATGAAGAAGGAAAAG+AGG | + | chr2.3:39049845-39049864 | MS.gene68687:CDS | 30.0% | |
GTTTGTGTGAGAAAATAAAG+AGG | + | chr2.3:39051722-39051741 | MS.gene68687:CDS | 30.0% | |
TAGATTGAAAATGAAGGGAT+TGG | + | chr2.3:39052242-39052261 | MS.gene68687:intron | 30.0% | |
TAGCCTCTTTATAATCATCT+GGG | - | chr2.3:39051687-39051706 | None:intergenic | 30.0% | |
TATCAGATTCACTCAATTGA+CGG | - | chr2.3:39050244-39050263 | None:intergenic | 30.0% | |
TCGATTAGTATGTAATAGAG+AGG | + | chr2.3:39050040-39050059 | MS.gene68687:CDS | 30.0% | |
TCTAAATGAAGTCAATGAAG+AGG | + | chr2.3:39051927-39051946 | MS.gene68687:CDS | 30.0% | |
TCTCATGGCACAAATAATAT+GGG | - | chr2.3:39051485-39051504 | None:intergenic | 30.0% | |
TGCACTAGATTGAAAATGAA+GGG | + | chr2.3:39052237-39052256 | MS.gene68687:intron | 30.0% | |
TGGATACTTACAAGAAGATT+AGG | + | chr2.3:39049871-39049890 | MS.gene68687:CDS | 30.0% | |
TGTGAAGAATCCAAAATTCT+TGG | + | chr2.3:39050868-39050887 | MS.gene68687:intron | 30.0% | |
TTGCACTAGATTGAAAATGA+AGG | + | chr2.3:39052236-39052255 | MS.gene68687:intron | 30.0% | |
TTTGATAGGATCACCAATAA+CGG | - | chr2.3:39051785-39051804 | None:intergenic | 30.0% | |
TTTGGAAATTGAGGAAAGAT+CGG | - | chr2.3:39052544-39052563 | None:intergenic | 30.0% | |
! | AATTTGAAATTGAGTGGAAG+AGG | + | chr2.3:39050933-39050952 | MS.gene68687:intron | 30.0% |
! | ATAGTCTAATTTGCAAAAGG+TGG | + | chr2.3:39051530-39051549 | MS.gene68687:CDS | 30.0% |
! | ATTTGAAATTGAGTGGAAGA+GGG | + | chr2.3:39050934-39050953 | MS.gene68687:intron | 30.0% |
! | CATCTTTCCATGTTACATTT+TGG | - | chr2.3:39052462-39052481 | None:intergenic | 30.0% |
! | CATGGAGGAACTATAATTTT+TGG | + | chr2.3:39050647-39050666 | MS.gene68687:intron | 30.0% |
! | CTGATAGTCTAATTTGCAAA+AGG | + | chr2.3:39051527-39051546 | MS.gene68687:CDS | 30.0% |
! | CTTTTGCAAATTAGACTATC+AGG | - | chr2.3:39051529-39051548 | None:intergenic | 30.0% |
! | GTTAGAACCTGTCATATTTT+GGG | + | chr2.3:39050296-39050315 | MS.gene68687:CDS | 30.0% |
! | TGGACAAATTTGAAATTGAG+TGG | + | chr2.3:39050927-39050946 | MS.gene68687:intron | 30.0% |
! | TGTTAGAACCTGTCATATTT+TGG | + | chr2.3:39050295-39050314 | MS.gene68687:CDS | 30.0% |
!! | CCTTGATTTGGAAAAAATTG+TGG | - | chr2.3:39052586-39052605 | None:intergenic | 30.0% |
!! | GCAATTTGATTTGGAAATTG+AGG | - | chr2.3:39052553-39052572 | None:intergenic | 30.0% |
!! | TTTGGTCTTCCATTTTAACA+GGG | - | chr2.3:39052444-39052463 | None:intergenic | 30.0% |
!! | TTTTGGTCTTCCATTTTAAC+AGG | - | chr2.3:39052445-39052464 | None:intergenic | 30.0% |
!!! | AAGCCTCTTGTTATTTTTTC+TGG | + | chr2.3:39050614-39050633 | MS.gene68687:intron | 30.0% |
!!! | AGCCTCTTGTTATTTTTTCT+GGG | + | chr2.3:39050615-39050634 | MS.gene68687:intron | 30.0% |
!!! | ATGCGAGAAAACTTTTTTTG+TGG | + | chr2.3:39051037-39051056 | MS.gene68687:intron | 30.0% |
!!! | CCACAATTTTTTCCAAATCA+AGG | + | chr2.3:39052583-39052602 | MS.gene68687:CDS | 30.0% |
AAGATCGGAACACTTTGAAT+TGG | - | chr2.3:39052529-39052548 | None:intergenic | 35.0% | |
AAGTTTACCACAACAGAAGA+AGG | + | chr2.3:39050485-39050504 | MS.gene68687:intron | 35.0% | |
AATGAGAGAAGCTATCAAAG+AGG | + | chr2.3:39050784-39050803 | MS.gene68687:intron | 35.0% | |
AATGGCGTGTTTAATGAAGA+AGG | + | chr2.3:39049837-39049856 | MS.gene68687:CDS | 35.0% | |
ACACCCAGATGATTATAAAG+AGG | + | chr2.3:39051681-39051700 | MS.gene68687:CDS | 35.0% | |
ACAGATAAAAACATGCACAC+AGG | + | chr2.3:39052284-39052303 | MS.gene68687:CDS | 35.0% | |
ACTAATAAGTGGAGAGTTTC+TGG | + | chr2.3:39050155-39050174 | MS.gene68687:CDS | 35.0% | |
AGAAGAAATCATCCAGGAAA+AGG | + | chr2.3:39051833-39051852 | MS.gene68687:CDS | 35.0% | |
AGGATTGGAATTTGATTCAG+AGG | + | chr2.3:39049917-39049936 | MS.gene68687:CDS | 35.0% | |
ATACAGGCACAAAGAGTTAA+TGG | + | chr2.3:39051171-39051190 | MS.gene68687:CDS | 35.0% | |
ATGTATCACAAACAGCCTAA+AGG | + | chr2.3:39050737-39050756 | MS.gene68687:intron | 35.0% | |
ATTATAAAGAGGCTATGGAG+GGG | + | chr2.3:39051692-39051711 | MS.gene68687:CDS | 35.0% | |
ATTTATGTCTCCATCGTTTG+CGG | - | chr2.3:39049796-39049815 | None:intergenic | 35.0% | |
CAAAACACTCATAGTCAATC+CGG | - | chr2.3:39050547-39050566 | None:intergenic | 35.0% | |
CAACAGAACTTGAATGTGAT+GGG | - | chr2.3:39052648-39052667 | None:intergenic | 35.0% | |
CAAGAAGATTAGGGAATTGA+CGG | + | chr2.3:39049881-39049900 | MS.gene68687:CDS | 35.0% | |
CACCCAGAAAAAATAACAAG+AGG | - | chr2.3:39050620-39050639 | None:intergenic | 35.0% | |
CATATGAGATGAAGACAATG+TGG | + | chr2.3:39051002-39051021 | MS.gene68687:intron | 35.0% | |
GAAATCTATGCAGATTGTCA+TGG | + | chr2.3:39049960-39049979 | MS.gene68687:CDS | 35.0% | |
GATGATTTCTTCTTCTTACG+AGG | - | chr2.3:39051826-39051845 | None:intergenic | 35.0% | |
GATGGAACGATTAGCAAAAA+TGG | + | chr2.3:39052815-39052834 | MS.gene68687:CDS | 35.0% | |
GATTATAAAGAGGCTATGGA+GGG | + | chr2.3:39051691-39051710 | MS.gene68687:CDS | 35.0% | |
GCACAAATAATATGGGAACA+TGG | - | chr2.3:39051478-39051497 | None:intergenic | 35.0% | |
GGATGATGATATAAGAGGAT+TGG | + | chr2.3:39049902-39049921 | MS.gene68687:CDS | 35.0% | |
GTAAGAAGAAGAAATCATCC+AGG | + | chr2.3:39051827-39051846 | MS.gene68687:CDS | 35.0% | |
GTCTCATGGCACAAATAATA+TGG | - | chr2.3:39051486-39051505 | None:intergenic | 35.0% | |
GTGATTGTAGACAGTTTGAA+CGG | + | chr2.3:39051443-39051462 | MS.gene68687:CDS | 35.0% | |
TAGGAACCAAATGAGCATAA+CGG | - | chr2.3:39050217-39050236 | None:intergenic | 35.0% | |
TGAAGAAGGAAAAGAGGATA+TGG | + | chr2.3:39049851-39049870 | MS.gene68687:CDS | 35.0% | |
TGAATGTTGTGTATACTCAC+AGG | - | chr2.3:39052706-39052725 | None:intergenic | 35.0% | |
TGATAAACCCCCTGTTAAAA+TGG | + | chr2.3:39052432-39052451 | MS.gene68687:CDS | 35.0% | |
TGATTATAAAGAGGCTATGG+AGG | + | chr2.3:39051690-39051709 | MS.gene68687:CDS | 35.0% | |
TGATTTCTTCTTCTTACGAG+GGG | - | chr2.3:39051824-39051843 | None:intergenic | 35.0% | |
TGGAAGACCAAAATGTAACA+TGG | + | chr2.3:39052452-39052471 | MS.gene68687:CDS | 35.0% | |
TGTATCACAAACAGCCTAAA+GGG | + | chr2.3:39050738-39050757 | MS.gene68687:intron | 35.0% | |
TGTTGACAACAAAGTTACAC+AGG | + | chr2.3:39051224-39051243 | MS.gene68687:CDS | 35.0% | |
TTGGCGCCTGTAAAATAATT+AGG | - | chr2.3:39052499-39052518 | None:intergenic | 35.0% | |
! | AGTCTGATTGATTTCATGCA+TGG | + | chr2.3:39051127-39051146 | MS.gene68687:intron | 35.0% |
! | ATGTTAGTTTATGGGTGCAT+TGG | + | chr2.3:39052791-39052810 | MS.gene68687:intron | 35.0% |
! | CATTCAAGTTCTGTTGGATA+TGG | + | chr2.3:39052652-39052671 | MS.gene68687:CDS | 35.0% |
! | GATTGACTATGAGTGTTTTG+GGG | + | chr2.3:39050547-39050566 | MS.gene68687:intron | 35.0% |
! | GGATTGACTATGAGTGTTTT+GGG | + | chr2.3:39050546-39050565 | MS.gene68687:intron | 35.0% |
! | GTAATCATCCTTTGCTGATT+TGG | - | chr2.3:39051557-39051576 | None:intergenic | 35.0% |
! | GTATCTAGTTCAGCTTGATA+AGG | + | chr2.3:39051402-39051421 | MS.gene68687:CDS | 35.0% |
! | TGTAACTTTGTTGTCAACAC+AGG | - | chr2.3:39051223-39051242 | None:intergenic | 35.0% |
! | TGTCAATGTTACTTCAATGC+AGG | + | chr2.3:39052121-39052140 | MS.gene68687:CDS | 35.0% |
! | TTGACGGATGATGATATAAG+AGG | + | chr2.3:39049897-39049916 | MS.gene68687:CDS | 35.0% |
!! | AATTATTTTACAGGCGCCAA+CGG | + | chr2.3:39052499-39052518 | MS.gene68687:CDS | 35.0% |
!! | TTGGTCTTCCATTTTAACAG+GGG | - | chr2.3:39052443-39052462 | None:intergenic | 35.0% |
AAAATGTTCATGTTCCGTCG+AGG | + | chr2.3:39051613-39051632 | MS.gene68687:CDS | 40.0% | |
AAACACGTGAGACATACAAG+TGG | + | chr2.3:39050690-39050709 | MS.gene68687:intron | 40.0% | |
AAAGGCAAGAATAGAAGGTG+GGG | + | chr2.3:39050400-39050419 | MS.gene68687:CDS | 40.0% | |
AACTCTCGAATCACAAGCAA+TGG | + | chr2.3:39052868-39052887 | MS.gene68687:CDS | 40.0% | |
AAGACCAATCCATCCGTTAT+TGG | + | chr2.3:39051769-39051788 | MS.gene68687:CDS | 40.0% | |
AATGTCCAGAGTCAAGATCA+AGG | + | chr2.3:39052400-39052419 | MS.gene68687:intron | 40.0% | |
ACTCTCGAATCACAAGCAAT+GGG | + | chr2.3:39052869-39052888 | MS.gene68687:CDS | 40.0% | |
ACTTTGAATTGGAACACCGT+TGG | - | chr2.3:39052518-39052537 | None:intergenic | 40.0% | |
AGGAACCAAATGAGCATAAC+GGG | - | chr2.3:39050216-39050235 | None:intergenic | 40.0% | |
AGTTAACTCATGGTTGTGTG+AGG | - | chr2.3:39050189-39050208 | None:intergenic | 40.0% | |
ATACTCACAGGTGTATGATG+AGG | - | chr2.3:39052694-39052713 | None:intergenic | 40.0% | |
CCAACAGAACTTGAATGTGA+TGG | - | chr2.3:39052649-39052668 | None:intergenic | 40.0% | |
GAAAGGCAAGAATAGAAGGT+GGG | + | chr2.3:39050399-39050418 | MS.gene68687:CDS | 40.0% | |
GAAGGAAAGGCAAGAATAGA+AGG | + | chr2.3:39050395-39050414 | MS.gene68687:CDS | 40.0% | |
GCAAACGATGGAGACATAAA+TGG | + | chr2.3:39049795-39049814 | MS.gene68687:CDS | 40.0% | |
GTATCACAAACAGCCTAAAG+GGG | + | chr2.3:39050739-39050758 | MS.gene68687:intron | 40.0% | |
GTTAACTCATGGTTGTGTGA+GGG | - | chr2.3:39050188-39050207 | None:intergenic | 40.0% | |
TAAACGTCCTTCTTCTGTTG+TGG | - | chr2.3:39050495-39050514 | None:intergenic | 40.0% | |
TACTCACAGGTGTATGATGA+GGG | - | chr2.3:39052693-39052712 | None:intergenic | 40.0% | |
TCACTCAATTGACGGTTCTT+AGG | - | chr2.3:39050236-39050255 | None:intergenic | 40.0% | |
TCTGACCATGACAAAAACGT+TGG | + | chr2.3:39051964-39051983 | MS.gene68687:CDS | 40.0% | |
TCTGATAAAGCCCTTGTTGA+TGG | + | chr2.3:39050257-39050276 | MS.gene68687:CDS | 40.0% | |
TGACAAAAACGTTGGATGTG+AGG | + | chr2.3:39051972-39051991 | MS.gene68687:CDS | 40.0% | |
TGCAGAACACTTAGTTCGAA+TGG | - | chr2.3:39050108-39050127 | None:intergenic | 40.0% | |
TGTAGACAGTTTGAACGGAT+TGG | + | chr2.3:39051448-39051467 | MS.gene68687:CDS | 40.0% | |
TTCGAACTAAGTGTTCTGCA+AGG | + | chr2.3:39050108-39050127 | MS.gene68687:CDS | 40.0% | |
TTGCATTTGACGCAACTTAC+AGG | + | chr2.3:39050576-39050595 | MS.gene68687:intron | 40.0% | |
TTGCTTGTGATTCGAGAGTT+TGG | - | chr2.3:39052868-39052887 | None:intergenic | 40.0% | |
TTTATGATGGCTCAGAAAGG+AGG | + | chr2.3:39050320-39050339 | MS.gene68687:CDS | 40.0% | |
! | AGAACAATGTCTCCTTTTCC+TGG | - | chr2.3:39051848-39051867 | None:intergenic | 40.0% |
! | ATAGGATCACCAATAACGGA+TGG | - | chr2.3:39051781-39051800 | None:intergenic | 40.0% |
! | CACATCCAACGTTTTTGTCA+TGG | - | chr2.3:39051972-39051991 | None:intergenic | 40.0% |
! | CCATCACATTCAAGTTCTGT+TGG | + | chr2.3:39052646-39052665 | MS.gene68687:CDS | 40.0% |
! | CGGATTGACTATGAGTGTTT+TGG | + | chr2.3:39050545-39050564 | MS.gene68687:intron | 40.0% |
! | GTGTTGATAAGAGTTGTGAC+AGG | + | chr2.3:39052081-39052100 | MS.gene68687:CDS | 40.0% |
! | TTTTCTGGGTGTAACCATCA+TGG | + | chr2.3:39050629-39050648 | MS.gene68687:intron | 40.0% |
!! | ATCACCAATAACGGATGGAT+TGG | - | chr2.3:39051776-39051795 | None:intergenic | 40.0% |
!! | GGTTTTATGATGGCTCAGAA+AGG | + | chr2.3:39050317-39050336 | MS.gene68687:CDS | 40.0% |
!! | GTTTTTGAGCAGTCTAGTCT+CGG | + | chr2.3:39051331-39051350 | MS.gene68687:CDS | 40.0% |
!! | TGGTCTTCCATTTTAACAGG+GGG | - | chr2.3:39052442-39052461 | None:intergenic | 40.0% |
AAAGGAGGTCATGAGAGTCT+GGG | + | chr2.3:39050335-39050354 | MS.gene68687:CDS | 45.0% | |
AAGGTGGACCAAATCAGCAA+AGG | + | chr2.3:39051546-39051565 | MS.gene68687:CDS | 45.0% | |
AATGGTGAAGATTTGGCCAG+CGG | + | chr2.3:39049813-39049832 | MS.gene68687:CDS | 45.0% | |
ACATCACGTCTAGCTAGTTC+TGG | - | chr2.3:39051907-39051926 | None:intergenic | 45.0% | |
AGAACTACATCCAGGTGTGA+AGG | + | chr2.3:39051064-39051083 | MS.gene68687:intron | 45.0% | |
AGTTGTCTGCTCGTGGAAAT+TGG | - | chr2.3:39052624-39052643 | None:intergenic | 45.0% | |
ATTAAACACGCCATTACCGC+TGG | - | chr2.3:39049832-39049851 | None:intergenic | 45.0% | |
CAAAGACGATGCAACGAGTT+TGG | - | chr2.3:39050815-39050834 | None:intergenic | 45.0% | |
CAGTAGACATAGTTCCTCGA+CGG | - | chr2.3:39051630-39051649 | None:intergenic | 45.0% | |
CATCACCTTGATCTTGACTC+TGG | - | chr2.3:39052408-39052427 | None:intergenic | 45.0% | |
CGTTGCATCGTCTTTGTTCA+TGG | + | chr2.3:39050819-39050838 | MS.gene68687:intron | 45.0% | |
GGAAAGGCAAGAATAGAAGG+TGG | + | chr2.3:39050398-39050417 | MS.gene68687:CDS | 45.0% | |
GTGGCATAAGAACTACATCC+AGG | + | chr2.3:39051056-39051075 | MS.gene68687:intron | 45.0% | |
GTTGTCTGCTCGTGGAAATT+GGG | - | chr2.3:39052623-39052642 | None:intergenic | 45.0% | |
GTTTATGGGTGCATTGGAGA+TGG | + | chr2.3:39052797-39052816 | MS.gene68687:intron | 45.0% | |
TCCAACCCGTTATGCTCATT+TGG | + | chr2.3:39050208-39050227 | MS.gene68687:CDS | 45.0% | |
TGCAGATTGTCATGGGTTTG+TGG | + | chr2.3:39049968-39049987 | MS.gene68687:CDS | 45.0% | |
TGCGTGAAGACCATCAACAA+GGG | - | chr2.3:39050270-39050289 | None:intergenic | 45.0% | |
TGCTGCGTTGAGTTATTTGC+AGG | + | chr2.3:39050430-39050449 | MS.gene68687:CDS | 45.0% | |
TGGTGATCCTATCAAAGCCA+AGG | + | chr2.3:39051789-39051808 | MS.gene68687:CDS | 45.0% | |
TTGTCTGCTCGTGGAAATTG+GGG | - | chr2.3:39052622-39052641 | None:intergenic | 45.0% | |
!! | AACGGGTTGGAGTTAACTCA+TGG | - | chr2.3:39050199-39050218 | None:intergenic | 45.0% |
!! | ACCAAATGAGCATAACGGGT+TGG | - | chr2.3:39050212-39050231 | None:intergenic | 45.0% |
!! | ATGAGAGTCTGGGATTTTGC+AGG | + | chr2.3:39050345-39050364 | MS.gene68687:CDS | 45.0% |
!!! | CTATGAGTGTTTTGGGGATG+TGG | + | chr2.3:39050553-39050572 | MS.gene68687:intron | 45.0% |
ACACTCATAGTCAATCCGGC+TGG | - | chr2.3:39050543-39050562 | None:intergenic | 50.0% | |
AGTGATGTGCTCGTGTCTCA+TGG | - | chr2.3:39051500-39051519 | None:intergenic | 50.0% | |
CCATCAGTAACCACCCCTTT+AGG | - | chr2.3:39050755-39050774 | None:intergenic | 50.0% | |
CCTAAAGGGGTGGTTACTGA+TGG | + | chr2.3:39050752-39050771 | MS.gene68687:intron | 50.0% | |
CCTATCAAAGCCAAGGCCAA+AGG | + | chr2.3:39051796-39051815 | MS.gene68687:CDS | 50.0% | |
CGAGTTTATGCCTTCACACC+TGG | - | chr2.3:39051077-39051096 | None:intergenic | 50.0% | |
GAAAGGAGGTCATGAGAGTC+TGG | + | chr2.3:39050334-39050353 | MS.gene68687:CDS | 50.0% | |
GAAGATTTGGCCAGCGGTAA+TGG | + | chr2.3:39049819-39049838 | MS.gene68687:CDS | 50.0% | |
GTGCGTGAAGACCATCAACA+AGG | - | chr2.3:39050271-39050290 | None:intergenic | 50.0% | |
TCACAAACAGCCTAAAGGGG+TGG | + | chr2.3:39050742-39050761 | MS.gene68687:intron | 50.0% | |
TCTGGGTGTAACCATCATGG+AGG | + | chr2.3:39050632-39050651 | MS.gene68687:intron | 50.0% | |
TGTCTGCTCGTGGAAATTGG+GGG | - | chr2.3:39052621-39052640 | None:intergenic | 50.0% | |
TTTGGTCGGATTGAACCAGC+CGG | + | chr2.3:39050525-39050544 | MS.gene68687:intron | 50.0% | |
!! | ATAAAGAGGCGTCGTGAGAG+TGG | + | chr2.3:39051736-39051755 | MS.gene68687:CDS | 50.0% |
!! | CCTTTGGCCTTGGCTTTGAT+AGG | - | chr2.3:39051799-39051818 | None:intergenic | 50.0% |
!! | GAGTCTGGGATTTTGCAGGA+AGG | + | chr2.3:39050349-39050368 | MS.gene68687:CDS | 50.0% |
!! | GTTGATGGTCTTCACGCACA+CGG | + | chr2.3:39050272-39050291 | MS.gene68687:CDS | 50.0% |
GATGGGAAGTTGTCTGCTCG+TGG | - | chr2.3:39052631-39052650 | None:intergenic | 55.0% | |
!! | CTTCTTACGAGGGGCACCTT+TGG | - | chr2.3:39051815-39051834 | None:intergenic | 55.0% |
!! | ACGAGGGGCACCTTTGGCCT+TGG | - | chr2.3:39051809-39051828 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 39049789 | 39052908 | 39049789 | ID=MS.gene68687 |
chr2.3 | mRNA | 39049789 | 39052908 | 39049789 | ID=MS.gene68687.t1;Parent=MS.gene68687 |
chr2.3 | exon | 39049789 | 39050474 | 39049789 | ID=MS.gene68687.t1.exon1;Parent=MS.gene68687.t1 |
chr2.3 | CDS | 39049789 | 39050474 | 39049789 | ID=cds.MS.gene68687.t1;Parent=MS.gene68687.t1 |
chr2.3 | exon | 39051159 | 39051993 | 39051159 | ID=MS.gene68687.t1.exon2;Parent=MS.gene68687.t1 |
chr2.3 | CDS | 39051159 | 39051993 | 39051159 | ID=cds.MS.gene68687.t1;Parent=MS.gene68687.t1 |
chr2.3 | exon | 39052080 | 39052172 | 39052080 | ID=MS.gene68687.t1.exon3;Parent=MS.gene68687.t1 |
chr2.3 | CDS | 39052080 | 39052172 | 39052080 | ID=cds.MS.gene68687.t1;Parent=MS.gene68687.t1 |
chr2.3 | exon | 39052245 | 39052316 | 39052245 | ID=MS.gene68687.t1.exon4;Parent=MS.gene68687.t1 |
chr2.3 | CDS | 39052245 | 39052316 | 39052245 | ID=cds.MS.gene68687.t1;Parent=MS.gene68687.t1 |
chr2.3 | exon | 39052409 | 39052705 | 39052409 | ID=MS.gene68687.t1.exon5;Parent=MS.gene68687.t1 |
chr2.3 | CDS | 39052409 | 39052705 | 39052409 | ID=cds.MS.gene68687.t1;Parent=MS.gene68687.t1 |
chr2.3 | exon | 39052798 | 39052908 | 39052798 | ID=MS.gene68687.t1.exon6;Parent=MS.gene68687.t1 |
chr2.3 | CDS | 39052798 | 39052908 | 39052798 | ID=cds.MS.gene68687.t1;Parent=MS.gene68687.t1 |
Gene Sequence |
Protein sequence |