Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68784.t1 | ADD09572.1 | 84.6 | 285 | 33 | 6 | 1 | 276 | 1 | 283 | 1.70E-126 | 462.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68784.t1 | Q9LQZ7 | 47.2 | 218 | 102 | 4 | 1 | 205 | 1 | 218 | 2.5e-46 | 187.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68784.t1 | D3YBC1 | 84.6 | 285 | 33 | 6 | 1 | 276 | 1 | 283 | 1.2e-126 | 462.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene68784.t1 | TF | DBB |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68784.t1 | MTR_3g117320 | 94.444 | 216 | 9 | 2 | 1 | 213 | 1 | 216 | 3.08e-150 | 419 |
| MS.gene68784.t1 | MTR_4g071200 | 54.464 | 224 | 88 | 5 | 1 | 217 | 1 | 217 | 6.08e-73 | 223 |
| MS.gene68784.t1 | MTR_3g113070 | 51.000 | 200 | 53 | 4 | 1 | 197 | 1 | 158 | 2.35e-59 | 188 |
| MS.gene68784.t1 | MTR_1g023260 | 50.777 | 193 | 85 | 3 | 1 | 193 | 1 | 183 | 9.38e-55 | 176 |
| MS.gene68784.t1 | MTR_1g023260 | 49.500 | 200 | 91 | 3 | 1 | 200 | 1 | 190 | 1.21e-54 | 178 |
| MS.gene68784.t1 | MTR_2g073370 | 55.738 | 122 | 53 | 1 | 1 | 122 | 1 | 121 | 1.99e-39 | 139 |
| MS.gene68784.t1 | MTR_4g067320 | 42.138 | 159 | 88 | 3 | 1 | 158 | 1 | 156 | 1.70e-34 | 125 |
| MS.gene68784.t1 | MTR_4g067320 | 42.138 | 159 | 88 | 3 | 1 | 158 | 1 | 156 | 1.82e-34 | 125 |
| MS.gene68784.t1 | MTR_2g099010 | 52.294 | 109 | 51 | 1 | 1 | 109 | 1 | 108 | 4.97e-33 | 121 |
| MS.gene68784.t1 | MTR_2g099010 | 52.294 | 109 | 51 | 1 | 1 | 109 | 1 | 108 | 5.06e-33 | 121 |
| MS.gene68784.t1 | MTR_5g021580 | 37.594 | 133 | 73 | 3 | 1 | 127 | 1 | 129 | 3.75e-23 | 94.0 |
| MS.gene68784.t1 | MTR_5g021580 | 37.594 | 133 | 73 | 3 | 1 | 127 | 1 | 129 | 4.54e-23 | 93.6 |
| MS.gene68784.t1 | MTR_1g023260 | 41.912 | 136 | 69 | 3 | 65 | 200 | 57 | 182 | 1.89e-20 | 88.6 |
| MS.gene68784.t1 | MTR_1g013450 | 40.206 | 97 | 48 | 1 | 5 | 101 | 6 | 92 | 2.64e-17 | 80.5 |
| MS.gene68784.t1 | MTR_3g105710 | 37.113 | 97 | 51 | 1 | 5 | 101 | 6 | 92 | 1.13e-15 | 75.5 |
| MS.gene68784.t1 | MTR_4g128930 | 39.785 | 93 | 46 | 1 | 5 | 97 | 22 | 104 | 1.69e-15 | 75.9 |
| MS.gene68784.t1 | MTR_7g018170 | 36.559 | 93 | 49 | 1 | 5 | 97 | 26 | 108 | 2.89e-13 | 69.7 |
| MS.gene68784.t1 | MTR_5g069480 | 35.052 | 97 | 53 | 2 | 1 | 97 | 1 | 87 | 8.56e-13 | 67.4 |
| MS.gene68784.t1 | MTR_5g069480 | 35.052 | 97 | 53 | 2 | 1 | 97 | 1 | 87 | 8.86e-13 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68784.t1 | AT1G75540 | 48.624 | 218 | 99 | 4 | 1 | 205 | 1 | 218 | 7.22e-60 | 193 |
| MS.gene68784.t1 | AT4G39070 | 55.000 | 200 | 73 | 5 | 1 | 183 | 1 | 200 | 3.94e-56 | 181 |
| MS.gene68784.t1 | AT1G06040 | 52.593 | 135 | 62 | 2 | 1 | 135 | 1 | 133 | 6.00e-40 | 137 |
| MS.gene68784.t1 | AT1G78600 | 51.163 | 129 | 59 | 2 | 1 | 129 | 1 | 125 | 1.03e-38 | 137 |
| MS.gene68784.t1 | AT1G06040 | 52.593 | 135 | 62 | 2 | 1 | 135 | 1 | 133 | 1.23e-38 | 136 |
| MS.gene68784.t1 | AT1G78600 | 51.163 | 129 | 59 | 2 | 1 | 129 | 1 | 125 | 1.84e-38 | 137 |
| MS.gene68784.t1 | AT4G10240 | 54.688 | 128 | 48 | 3 | 1 | 122 | 1 | 124 | 3.11e-37 | 129 |
| MS.gene68784.t1 | AT2G31380 | 53.211 | 109 | 50 | 1 | 1 | 109 | 1 | 108 | 1.28e-34 | 125 |
| MS.gene68784.t1 | AT4G38960 | 39.316 | 117 | 67 | 2 | 1 | 117 | 1 | 113 | 4.71e-23 | 93.6 |
| MS.gene68784.t1 | AT4G38960 | 39.316 | 117 | 67 | 2 | 1 | 117 | 1 | 113 | 4.71e-23 | 93.6 |
| MS.gene68784.t1 | AT2G21320 | 44.000 | 100 | 52 | 2 | 1 | 100 | 1 | 96 | 3.20e-22 | 90.9 |
| MS.gene68784.t1 | AT2G24790 | 39.785 | 93 | 46 | 1 | 5 | 97 | 8 | 90 | 6.83e-17 | 77.8 |
| MS.gene68784.t1 | AT2G24790 | 38.144 | 97 | 50 | 1 | 5 | 101 | 8 | 94 | 2.39e-16 | 77.8 |
| MS.gene68784.t1 | AT5G24930 | 36.082 | 97 | 52 | 1 | 5 | 101 | 6 | 92 | 1.99e-15 | 75.9 |
| MS.gene68784.t1 | AT4G38960 | 28.750 | 160 | 67 | 3 | 1 | 117 | 1 | 156 | 2.74e-15 | 73.6 |
| MS.gene68784.t1 | AT5G15850 | 32.520 | 123 | 72 | 2 | 5 | 126 | 12 | 124 | 3.03e-14 | 72.4 |
| MS.gene68784.t1 | AT3G02380 | 34.286 | 105 | 57 | 2 | 5 | 109 | 16 | 108 | 2.46e-13 | 69.7 |
| MS.gene68784.t1 | AT2G47890 | 35.593 | 118 | 55 | 3 | 5 | 111 | 13 | 120 | 2.96e-12 | 65.1 |
| MS.gene68784.t1 | AT2G47890 | 41.176 | 85 | 40 | 2 | 5 | 89 | 13 | 87 | 4.70e-12 | 65.5 |
| MS.gene68784.t1 | AT5G15840 | 31.132 | 106 | 61 | 2 | 5 | 110 | 20 | 113 | 4.92e-12 | 65.9 |
| MS.gene68784.t1 | AT2G47890 | 41.176 | 85 | 40 | 2 | 5 | 89 | 13 | 87 | 5.62e-12 | 65.5 |
| MS.gene68784.t1 | AT1G28050 | 34.653 | 101 | 56 | 1 | 2 | 102 | 6 | 96 | 6.02e-12 | 65.9 |
| MS.gene68784.t1 | AT5G15840 | 31.132 | 106 | 61 | 2 | 5 | 110 | 20 | 113 | 6.26e-12 | 64.7 |
| MS.gene68784.t1 | AT2G33500 | 33.000 | 100 | 57 | 1 | 3 | 102 | 10 | 99 | 9.30e-12 | 65.1 |
| MS.gene68784.t1 | AT2G33500 | 33.000 | 100 | 57 | 1 | 3 | 102 | 10 | 99 | 9.95e-12 | 65.1 |
Find 51 sgRNAs with CRISPR-Local
Find 80 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTATGGCTGTACAGTTTC+AGG | 0.212421 | 3.2:+92625171 | MS.gene68784:CDS |
| TTTGATCTAGAGTGGTTTCT+TGG | 0.257986 | 3.2:-92624384 | None:intergenic |
| GAAGCTTTCAAGCAATTCTT+TGG | 0.294858 | 3.2:+92624326 | MS.gene68784:CDS |
| ACTTCAAAATGGAAAGATTA+TGG | 0.301261 | 3.2:+92625156 | MS.gene68784:CDS |
| GATGCTTCTTTCCCACCTAA+TGG | 0.309132 | 3.2:+92624564 | MS.gene68784:CDS |
| CAAAAGTGAACACTTCAAAA+TGG | 0.317889 | 3.2:+92625145 | MS.gene68784:CDS |
| ATAGAATCGCTCTATCTTCT+TGG | 0.325288 | 3.2:-92624227 | None:intergenic |
| CCCACCTAATGGTTTCTGTA+AGG | 0.391077 | 3.2:+92624575 | MS.gene68784:CDS |
| TAAACCTTACAGAAACCATT+AGG | 0.399460 | 3.2:-92624579 | None:intergenic |
| ACTTGTTAACATGAATATCT+TGG | 0.399770 | 3.2:-92625014 | None:intergenic |
| TCTTGGTTCAGAGCCAATAC+TGG | 0.407926 | 3.2:-92624367 | None:intergenic |
| GCAGAAGCAGAATCATTATT+CGG | 0.420688 | 3.2:+92624981 | MS.gene68784:intron |
| ATCACAAAGAGGGTAGTCTT+TGG | 0.421009 | 3.2:-92624012 | None:intergenic |
| AACCAGGTATTGTTTCAATC+AGG | 0.422845 | 3.2:-92624521 | None:intergenic |
| ACCACTGAGCTAATATTAGA+AGG | 0.428353 | 3.2:-92625105 | None:intergenic |
| AACATACACAGAAACATAAC+AGG | 0.440782 | 3.2:+92624286 | MS.gene68784:CDS |
| CATAACAGGTTTCTTCTCTC+TGG | 0.447881 | 3.2:+92624300 | MS.gene68784:CDS |
| GTGTATGTTCATTTGCTCCA+TGG | 0.455691 | 3.2:-92624272 | None:intergenic |
| GTGTTTGGTTGCAAGCTTGT+TGG | 0.456215 | 3.2:-92623961 | None:intergenic |
| CATTTGCTCCATGGATTGGA+AGG | 0.479724 | 3.2:-92624263 | None:intergenic |
| ATACTGGTGGATGATGAATC+TGG | 0.490828 | 3.2:-92624351 | None:intergenic |
| GATTCATCATCCACCAGTAT+TGG | 0.497576 | 3.2:+92624354 | MS.gene68784:CDS |
| AACGTGTGTACCTCTAGCTC+AGG | 0.499247 | 3.2:+92625053 | MS.gene68784:CDS |
| TGTTCATTTGCTCCATGGAT+TGG | 0.505507 | 3.2:-92624267 | None:intergenic |
| GAATGTGACCTTCCAATCCA+TGG | 0.511555 | 3.2:+92624255 | MS.gene68784:CDS |
| GAGGGTAGTCTTTGGAGTTG+AGG | 0.523182 | 3.2:-92624004 | None:intergenic |
| GATGAAGCTGCTCTTTGCCA+TGG | 0.528890 | 3.2:+92623915 | MS.gene68784:CDS |
| GACAACATGGCTAGTGACAC+TGG | 0.532967 | 3.2:+92624468 | MS.gene68784:CDS |
| TCTAATATTAGCTCAGTGGT+TGG | 0.556823 | 3.2:+92625108 | MS.gene68784:CDS |
| AAATGCAAGTTCTTCTTGCA+TGG | 0.564285 | 3.2:+92624440 | MS.gene68784:CDS |
| GAGCTAATATTAGAAGGAGT+AGG | 0.569687 | 3.2:-92625099 | None:intergenic |
| CTTTCTCACACACATCACAT+TGG | 0.572968 | 3.2:-92623866 | None:intergenic |
| GCTGATTCAGCCTGAGCTAG+AGG | 0.574263 | 3.2:-92625063 | None:intergenic |
| TGGTTCAGAGCCAATACTGG+TGG | 0.580417 | 3.2:-92624364 | None:intergenic |
| TGGTTGCAAGCTTGTTGGCA+CGG | 0.580653 | 3.2:-92623956 | None:intergenic |
| GGTAGTCTTTGGAGTTGAGG+TGG | 0.585466 | 3.2:-92624001 | None:intergenic |
| TTCATCTGAAGGACAGAACA+TGG | 0.588007 | 3.2:-92623898 | None:intergenic |
| ACCTTACAGAAACCATTAGG+TGG | 0.591397 | 3.2:-92624576 | None:intergenic |
| CAAAGAGCAGCTTCATCTGA+AGG | 0.591587 | 3.2:-92623909 | None:intergenic |
| GGATTGTATGATCACATCCA+TGG | 0.608665 | 3.2:-92623932 | None:intergenic |
| TACTGGTGGATGATGAATCT+GGG | 0.618443 | 3.2:-92624350 | None:intergenic |
| TACCTGATTGAAACAATACC+TGG | 0.621076 | 3.2:+92624519 | MS.gene68784:CDS |
| TTGCATGGCTGAAGACAACA+TGG | 0.623591 | 3.2:+92624455 | MS.gene68784:CDS |
| CCTTACAGAAACCATTAGGT+GGG | 0.623605 | 3.2:-92624575 | None:intergenic |
| TCCTTCTAATATTAGCTCAG+TGG | 0.624133 | 3.2:+92625104 | MS.gene68784:CDS |
| CTTGACAGATATCACAAAGA+GGG | 0.634180 | 3.2:-92624022 | None:intergenic |
| AAGTCTTCAAAACAGTAACC+AGG | 0.647020 | 3.2:-92624537 | None:intergenic |
| AGAGGTACACACGTTACTTG+AGG | 0.647058 | 3.2:-92625045 | None:intergenic |
| ACTTGACAGATATCACAAAG+AGG | 0.665459 | 3.2:-92624023 | None:intergenic |
| TTGCAAGCTTGTTGGCACGG+TGG | 0.712576 | 3.2:-92623953 | None:intergenic |
| TGATGTGTGTGAGAAAGCTG+AGG | 0.739027 | 3.2:+92623872 | MS.gene68784:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTACAATATTTTTATAGAA+AGG | + | chr3.2:92624848-92624867 | MS.gene68784:intron | 10.0% |
| !! | CTTATAATAATAAATCTTCT+GGG | + | chr3.2:92624928-92624947 | MS.gene68784:intron | 15.0% |
| !! | TCTTATAATAATAAATCTTC+TGG | + | chr3.2:92624927-92624946 | MS.gene68784:intron | 15.0% |
| !!! | AAGTAGATAATTTTTTTTGA+AGG | - | chr3.2:92624670-92624689 | None:intergenic | 15.0% |
| !!! | AGTAGATAATTTTTTTTGAA+GGG | - | chr3.2:92624669-92624688 | None:intergenic | 15.0% |
| !! | TCAAAGAAAATTGATGTATT+TGG | - | chr3.2:92624770-92624789 | None:intergenic | 20.0% |
| !! | TCTAACAAAATTGATGTATT+TGG | + | chr3.2:92624731-92624750 | MS.gene68784:intron | 20.0% |
| !! | TGTTACAAAATATAAGCAAA+AGG | + | chr3.2:92624705-92624724 | MS.gene68784:intron | 20.0% |
| !!! | ACTTTTGTTTACATTTGTAA+GGG | + | chr3.2:92624793-92624812 | MS.gene68784:intron | 20.0% |
| !!! | ATGTGACTAATGTTTTAAAA+TGG | + | chr3.2:92624136-92624155 | MS.gene68784:intron | 20.0% |
| !!! | CCGTCATTTTTTTATAAAAA+CGG | + | chr3.2:92624055-92624074 | MS.gene68784:intron | 20.0% |
| !!! | CCGTTTTTATAAAAAAATGA+CGG | - | chr3.2:92624058-92624077 | None:intergenic | 20.0% |
| !!! | TACTTTTGTTTACATTTGTA+AGG | + | chr3.2:92624792-92624811 | MS.gene68784:intron | 20.0% |
| ! | ACTTCAAAATGGAAAGATTA+TGG | + | chr3.2:92625156-92625175 | MS.gene68784:CDS | 25.0% |
| !! | ACTTGTTAACATGAATATCT+TGG | - | chr3.2:92625017-92625036 | None:intergenic | 25.0% |
| !! | TTGCTTATATTTTGTAACAG+AGG | - | chr3.2:92624704-92624723 | None:intergenic | 25.0% |
| !!! | TTTTTTTATAAAAACGGTCG+CGG | + | chr3.2:92624061-92624080 | MS.gene68784:intron | 25.0% |
| AACATACACAGAAACATAAC+AGG | + | chr3.2:92624286-92624305 | MS.gene68784:CDS | 30.0% | |
| CAAAAGTGAACACTTCAAAA+TGG | + | chr3.2:92625145-92625164 | MS.gene68784:CDS | 30.0% | |
| TAAACCTTACAGAAACCATT+AGG | - | chr3.2:92624582-92624601 | None:intergenic | 30.0% | |
| ! | AGAAGAACTTGCATTTTCAT+TGG | - | chr3.2:92624436-92624455 | None:intergenic | 30.0% |
| ! | TTTTCATTGGAAACTGATCT+TGG | - | chr3.2:92624423-92624442 | None:intergenic | 30.0% |
| AAATGCAAGTTCTTCTTGCA+TGG | + | chr3.2:92624440-92624459 | MS.gene68784:CDS | 35.0% | |
| AAGAGAAAAACGAGTGTGTT+TGG | - | chr3.2:92623979-92623998 | None:intergenic | 35.0% | |
| AAGTCTTCAAAACAGTAACC+AGG | - | chr3.2:92624540-92624559 | None:intergenic | 35.0% | |
| ACCACTGAGCTAATATTAGA+AGG | - | chr3.2:92625108-92625127 | None:intergenic | 35.0% | |
| ACTTGACAGATATCACAAAG+AGG | - | chr3.2:92624026-92624045 | None:intergenic | 35.0% | |
| ATAGAATCGCTCTATCTTCT+TGG | - | chr3.2:92624230-92624249 | None:intergenic | 35.0% | |
| CTTGACAGATATCACAAAGA+GGG | - | chr3.2:92624025-92624044 | None:intergenic | 35.0% | |
| GAAGCTTTCAAGCAATTCTT+TGG | + | chr3.2:92624326-92624345 | MS.gene68784:CDS | 35.0% | |
| GAGCTAATATTAGAAGGAGT+AGG | - | chr3.2:92625102-92625121 | None:intergenic | 35.0% | |
| GCAGAAGCAGAATCATTATT+CGG | + | chr3.2:92624981-92625000 | MS.gene68784:intron | 35.0% | |
| GTTTACATTTGTAAGGGTCT+AGG | + | chr3.2:92624799-92624818 | MS.gene68784:intron | 35.0% | |
| TACCTGATTGAAACAATACC+TGG | + | chr3.2:92624519-92624538 | MS.gene68784:CDS | 35.0% | |
| TATTAAAGATCCAGATGCGA+CGG | - | chr3.2:92624096-92624115 | None:intergenic | 35.0% | |
| TCCTTCTAATATTAGCTCAG+TGG | + | chr3.2:92625104-92625123 | MS.gene68784:CDS | 35.0% | |
| TCTAATATTAGCTCAGTGGT+TGG | + | chr3.2:92625108-92625127 | MS.gene68784:CDS | 35.0% | |
| ! | AACCAGGTATTGTTTCAATC+AGG | - | chr3.2:92624524-92624543 | None:intergenic | 35.0% |
| ! | TTTGATCTAGAGTGGTTTCT+TGG | - | chr3.2:92624387-92624406 | None:intergenic | 35.0% |
| !! | TGTTTGCTTTTGATCTAGAG+TGG | - | chr3.2:92624395-92624414 | None:intergenic | 35.0% |
| ACCTTACAGAAACCATTAGG+TGG | - | chr3.2:92624579-92624598 | None:intergenic | 40.0% | |
| ATCACAAAGAGGGTAGTCTT+TGG | - | chr3.2:92624015-92624034 | None:intergenic | 40.0% | |
| CATAACAGGTTTCTTCTCTC+TGG | + | chr3.2:92624300-92624319 | MS.gene68784:CDS | 40.0% | |
| CCTTACAGAAACCATTAGGT+GGG | - | chr3.2:92624578-92624597 | None:intergenic | 40.0% | |
| CTTTCTCACACACATCACAT+TGG | - | chr3.2:92623869-92623888 | None:intergenic | 40.0% | |
| GATTATGGCTGTACAGTTTC+AGG | + | chr3.2:92625171-92625190 | MS.gene68784:CDS | 40.0% | |
| GATTCATCATCCACCAGTAT+TGG | + | chr3.2:92624354-92624373 | MS.gene68784:CDS | 40.0% | |
| GGATTGTATGATCACATCCA+TGG | - | chr3.2:92623935-92623954 | None:intergenic | 40.0% | |
| GTGTATGTTCATTTGCTCCA+TGG | - | chr3.2:92624275-92624294 | None:intergenic | 40.0% | |
| TATAAAAACGGTCGCGGTAA+AGG | + | chr3.2:92624067-92624086 | MS.gene68784:intron | 40.0% | |
| TGTTCATTTGCTCCATGGAT+TGG | - | chr3.2:92624270-92624289 | None:intergenic | 40.0% | |
| TTCATCTGAAGGACAGAACA+TGG | - | chr3.2:92623901-92623920 | None:intergenic | 40.0% | |
| ! | AATATCGTGCGCTTTTGTAC+AGG | + | chr3.2:92624182-92624201 | MS.gene68784:intron | 40.0% |
| ! | ATACTGGTGGATGATGAATC+TGG | - | chr3.2:92624354-92624373 | None:intergenic | 40.0% |
| ! | ATTTGTAAGGGTCTAGGACT+AGG | + | chr3.2:92624805-92624824 | MS.gene68784:intron | 40.0% |
| ! | TACTGGTGGATGATGAATCT+GGG | - | chr3.2:92624353-92624372 | None:intergenic | 40.0% |
| CAAAGAGCAGCTTCATCTGA+AGG | - | chr3.2:92623912-92623931 | None:intergenic | 45.0% | |
| CCCACCTAATGGTTTCTGTA+AGG | + | chr3.2:92624575-92624594 | MS.gene68784:CDS | 45.0% | |
| GAATGTGACCTTCCAATCCA+TGG | + | chr3.2:92624255-92624274 | MS.gene68784:CDS | 45.0% | |
| GATGCTTCTTTCCCACCTAA+TGG | + | chr3.2:92624564-92624583 | MS.gene68784:CDS | 45.0% | |
| GTGTTTGGTTGCAAGCTTGT+TGG | - | chr3.2:92623964-92623983 | None:intergenic | 45.0% | |
| TCTTGGTTCAGAGCCAATAC+TGG | - | chr3.2:92624370-92624389 | None:intergenic | 45.0% | |
| TGATGTGTGTGAGAAAGCTG+AGG | + | chr3.2:92623872-92623891 | MS.gene68784:CDS | 45.0% | |
| TTGCATGGCTGAAGACAACA+TGG | + | chr3.2:92624455-92624474 | MS.gene68784:CDS | 45.0% | |
| ! | AGAGGTACACACGTTACTTG+AGG | - | chr3.2:92625048-92625067 | None:intergenic | 45.0% |
| !! | CATTTGCTCCATGGATTGGA+AGG | - | chr3.2:92624266-92624285 | None:intergenic | 45.0% |
| !! | ATAAATTTAAGTATAATTAA+AGG | - | chr3.2:92624618-92624637 | None:intergenic | 5.0% |
| !! | TAAATTTAAGTATAATTAAA+GGG | - | chr3.2:92624617-92624636 | None:intergenic | 5.0% |
| GACAACATGGCTAGTGACAC+TGG | + | chr3.2:92624468-92624487 | MS.gene68784:CDS | 50.0% | |
| GATGAAGCTGCTCTTTGCCA+TGG | + | chr3.2:92623915-92623934 | MS.gene68784:CDS | 50.0% | |
| TGGTTCAGAGCCAATACTGG+TGG | - | chr3.2:92624367-92624386 | None:intergenic | 50.0% | |
| ! | AACGTGTGTACCTCTAGCTC+AGG | + | chr3.2:92625053-92625072 | MS.gene68784:CDS | 50.0% |
| !! | GAGGGTAGTCTTTGGAGTTG+AGG | - | chr3.2:92624007-92624026 | None:intergenic | 50.0% |
| !! | GGTAGTCTTTGGAGTTGAGG+TGG | - | chr3.2:92624004-92624023 | None:intergenic | 50.0% |
| !! | TGGTTGCAAGCTTGTTGGCA+CGG | - | chr3.2:92623959-92623978 | None:intergenic | 50.0% |
| GTAAAGGTTGCCGTCGCATC+TGG | + | chr3.2:92624083-92624102 | MS.gene68784:intron | 55.0% | |
| ! | CGTGCGCTTTTGTACAGGAG+AGG | + | chr3.2:92624187-92624206 | MS.gene68784:intron | 55.0% |
| ! | GCTGATTCAGCCTGAGCTAG+AGG | - | chr3.2:92625066-92625085 | None:intergenic | 55.0% |
| ! | GCTTTTGTACAGGAGAGGCG+TGG | + | chr3.2:92624192-92624211 | MS.gene68784:intron | 55.0% |
| !! | TTGCAAGCTTGTTGGCACGG+TGG | - | chr3.2:92623956-92623975 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 92623858 | 92625236 | 92623858 | ID=MS.gene68784 |
| chr3.2 | mRNA | 92623858 | 92625236 | 92623858 | ID=MS.gene68784.t1;Parent=MS.gene68784 |
| chr3.2 | exon | 92623858 | 92624043 | 92623858 | ID=MS.gene68784.t1.exon1;Parent=MS.gene68784.t1 |
| chr3.2 | CDS | 92623858 | 92624043 | 92623858 | ID=cds.MS.gene68784.t1;Parent=MS.gene68784.t1 |
| chr3.2 | exon | 92624204 | 92624596 | 92624204 | ID=MS.gene68784.t1.exon2;Parent=MS.gene68784.t1 |
| chr3.2 | CDS | 92624204 | 92624596 | 92624204 | ID=cds.MS.gene68784.t1;Parent=MS.gene68784.t1 |
| chr3.2 | exon | 92624985 | 92625236 | 92624985 | ID=MS.gene68784.t1.exon3;Parent=MS.gene68784.t1 |
| chr3.2 | CDS | 92624985 | 92625236 | 92624985 | ID=cds.MS.gene68784.t1;Parent=MS.gene68784.t1 |
| Gene Sequence |
| Protein sequence |
