Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68902.t1 | XP_013463217.1 | 81.8 | 280 | 51 | 0 | 1 | 280 | 102 | 381 | 6.80E-120 | 440.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68902.t1 | Q9C6A1 | 30.2 | 106 | 74 | 0 | 154 | 259 | 286 | 391 | 1.5e-06 | 55.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68902.t1 | A0A072V6I2 | 81.8 | 280 | 51 | 0 | 1 | 280 | 102 | 381 | 4.9e-120 | 440.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene68902.t1 | TR | mTERF |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68902.t1 | MTR_2g436400 | 92.857 | 280 | 20 | 0 | 1 | 280 | 102 | 381 | 0.0 | 531 |
MS.gene68902.t1 | MTR_2g437060 | 79.570 | 279 | 57 | 0 | 2 | 280 | 111 | 389 | 2.56e-161 | 454 |
MS.gene68902.t1 | MTR_2g437080 | 70.357 | 280 | 83 | 0 | 1 | 280 | 95 | 374 | 1.19e-140 | 401 |
MS.gene68902.t1 | MTR_2g437030 | 69.286 | 280 | 86 | 0 | 1 | 280 | 181 | 460 | 6.51e-134 | 387 |
MS.gene68902.t1 | MTR_2g436440 | 67.143 | 280 | 92 | 0 | 1 | 280 | 101 | 380 | 3.66e-131 | 377 |
MS.gene68902.t1 | MTR_2g437020 | 65.125 | 281 | 95 | 2 | 2 | 280 | 95 | 374 | 1.60e-126 | 365 |
MS.gene68902.t1 | MTR_2g437040 | 63.571 | 280 | 102 | 0 | 1 | 280 | 95 | 374 | 2.27e-124 | 360 |
MS.gene68902.t1 | MTR_4g119550 | 52.669 | 281 | 132 | 1 | 1 | 280 | 104 | 384 | 9.10e-105 | 310 |
MS.gene68902.t1 | MTR_2g437960 | 51.237 | 283 | 135 | 2 | 1 | 280 | 108 | 390 | 2.43e-98 | 294 |
MS.gene68902.t1 | MTR_2g437170 | 52.281 | 285 | 131 | 3 | 1 | 280 | 110 | 394 | 3.36e-98 | 294 |
MS.gene68902.t1 | MTR_2g437960 | 51.237 | 283 | 135 | 2 | 1 | 280 | 108 | 390 | 6.11e-98 | 294 |
MS.gene68902.t1 | MTR_2g438010 | 50.877 | 285 | 133 | 3 | 1 | 280 | 125 | 407 | 1.03e-96 | 291 |
MS.gene68902.t1 | MTR_2g437150 | 52.143 | 280 | 129 | 3 | 1 | 275 | 110 | 389 | 3.15e-96 | 289 |
MS.gene68902.t1 | MTR_2g437180 | 50.896 | 279 | 132 | 2 | 1 | 276 | 104 | 380 | 1.12e-95 | 287 |
MS.gene68902.t1 | MTR_2g437120 | 52.688 | 279 | 128 | 2 | 1 | 276 | 106 | 383 | 6.45e-95 | 286 |
MS.gene68902.t1 | MTR_2g437100 | 53.025 | 281 | 127 | 3 | 1 | 276 | 115 | 395 | 6.81e-95 | 286 |
MS.gene68902.t1 | MTR_2g437160 | 51.064 | 282 | 136 | 1 | 1 | 280 | 118 | 399 | 1.16e-94 | 285 |
MS.gene68902.t1 | MTR_2g437130 | 49.643 | 280 | 141 | 0 | 1 | 280 | 96 | 375 | 1.21e-92 | 279 |
MS.gene68902.t1 | MTR_2g437990 | 48.582 | 282 | 143 | 1 | 1 | 280 | 105 | 386 | 1.73e-92 | 280 |
MS.gene68902.t1 | MTR_2g437200 | 46.178 | 314 | 131 | 2 | 1 | 276 | 85 | 398 | 4.23e-92 | 278 |
MS.gene68902.t1 | MTR_2g076320 | 48.780 | 287 | 134 | 2 | 2 | 280 | 106 | 387 | 1.72e-90 | 274 |
MS.gene68902.t1 | MTR_2g437260 | 46.570 | 277 | 146 | 1 | 1 | 275 | 89 | 365 | 6.49e-89 | 270 |
MS.gene68902.t1 | MTR_2g438020 | 45.541 | 314 | 133 | 2 | 1 | 276 | 124 | 437 | 8.12e-89 | 273 |
MS.gene68902.t1 | MTR_2g437240 | 43.711 | 318 | 141 | 2 | 1 | 280 | 85 | 402 | 1.75e-88 | 270 |
MS.gene68902.t1 | MTR_2g436460 | 46.570 | 277 | 147 | 1 | 1 | 276 | 100 | 376 | 9.82e-85 | 258 |
MS.gene68902.t1 | MTR_2g019840 | 48.239 | 284 | 139 | 4 | 1 | 280 | 96 | 375 | 2.00e-83 | 255 |
MS.gene68902.t1 | MTR_2g437940 | 47.857 | 280 | 121 | 3 | 1 | 280 | 104 | 358 | 2.88e-80 | 247 |
MS.gene68902.t1 | MTR_2g019810 | 46.071 | 280 | 147 | 3 | 1 | 278 | 84 | 361 | 3.85e-79 | 244 |
MS.gene68902.t1 | MTR_2g437090 | 69.753 | 162 | 49 | 0 | 119 | 280 | 1 | 162 | 1.87e-78 | 235 |
MS.gene68902.t1 | MTR_4g120380 | 42.701 | 274 | 157 | 0 | 1 | 274 | 97 | 370 | 3.73e-72 | 226 |
MS.gene68902.t1 | MTR_4g119580 | 41.606 | 274 | 160 | 0 | 1 | 274 | 97 | 370 | 5.68e-71 | 223 |
MS.gene68902.t1 | MTR_4g120380 | 42.913 | 254 | 145 | 0 | 1 | 254 | 97 | 350 | 2.90e-66 | 213 |
MS.gene68902.t1 | MTR_2g437160 | 54.082 | 196 | 87 | 1 | 88 | 280 | 113 | 308 | 8.15e-66 | 208 |
MS.gene68902.t1 | MTR_4g119570 | 36.437 | 247 | 124 | 1 | 26 | 272 | 14 | 227 | 3.99e-47 | 157 |
MS.gene68902.t1 | MTR_3g450500 | 32.509 | 283 | 181 | 4 | 2 | 276 | 92 | 372 | 5.67e-45 | 156 |
MS.gene68902.t1 | MTR_2g436370 | 77.895 | 95 | 21 | 0 | 1 | 95 | 101 | 195 | 1.12e-41 | 142 |
MS.gene68902.t1 | MTR_4g007490 | 30.070 | 286 | 189 | 4 | 1 | 278 | 90 | 372 | 2.74e-36 | 133 |
MS.gene68902.t1 | MTR_2g436380 | 55.752 | 113 | 43 | 3 | 119 | 231 | 1 | 106 | 1.71e-30 | 115 |
MS.gene68902.t1 | MTR_8g080990 | 28.889 | 270 | 188 | 3 | 4 | 270 | 100 | 368 | 3.99e-30 | 117 |
MS.gene68902.t1 | MTR_8g081000 | 25.899 | 278 | 201 | 3 | 1 | 274 | 109 | 385 | 6.49e-27 | 108 |
MS.gene68902.t1 | MTR_8g081000 | 25.899 | 278 | 201 | 3 | 1 | 274 | 109 | 385 | 6.60e-27 | 108 |
MS.gene68902.t1 | MTR_8g081000 | 25.899 | 278 | 201 | 3 | 1 | 274 | 109 | 385 | 8.42e-27 | 108 |
MS.gene68902.t1 | MTR_3g085240 | 60.377 | 53 | 21 | 0 | 178 | 230 | 176 | 228 | 1.14e-15 | 75.1 |
MS.gene68902.t1 | MTR_4g119615 | 60.000 | 50 | 20 | 0 | 218 | 267 | 26 | 75 | 3.15e-14 | 67.4 |
MS.gene68902.t1 | MTR_2g019830 | 53.846 | 65 | 29 | 1 | 212 | 276 | 136 | 199 | 3.56e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68902.t1 | AT5G07900 | 35.842 | 279 | 173 | 3 | 1 | 273 | 121 | 399 | 6.71e-55 | 182 |
MS.gene68902.t1 | AT1G21150 | 29.930 | 284 | 191 | 4 | 1 | 277 | 72 | 354 | 8.29e-36 | 131 |
MS.gene68902.t1 | AT1G21150 | 29.930 | 284 | 191 | 4 | 1 | 277 | 108 | 390 | 1.52e-35 | 131 |
MS.gene68902.t1 | AT1G21150 | 29.930 | 284 | 191 | 4 | 1 | 277 | 172 | 454 | 3.06e-35 | 132 |
MS.gene68902.t1 | AT1G61980 | 26.861 | 309 | 175 | 6 | 1 | 265 | 104 | 405 | 2.14e-26 | 107 |
MS.gene68902.t1 | AT1G61980 | 26.861 | 309 | 175 | 6 | 1 | 265 | 104 | 405 | 2.14e-26 | 107 |
MS.gene68902.t1 | AT1G61980 | 26.861 | 309 | 175 | 6 | 1 | 265 | 104 | 405 | 2.14e-26 | 107 |
MS.gene68902.t1 | AT5G64950 | 30.175 | 285 | 179 | 6 | 6 | 274 | 96 | 376 | 2.13e-24 | 101 |
MS.gene68902.t1 | AT1G62010 | 25.442 | 283 | 172 | 5 | 20 | 265 | 109 | 389 | 2.59e-24 | 101 |
MS.gene68902.t1 | AT3G46950 | 24.928 | 349 | 186 | 8 | 1 | 277 | 104 | 448 | 2.28e-23 | 99.4 |
MS.gene68902.t1 | AT1G61970 | 25.753 | 299 | 179 | 6 | 1 | 259 | 104 | 399 | 3.28e-22 | 95.5 |
MS.gene68902.t1 | AT1G61970 | 25.753 | 299 | 179 | 6 | 1 | 259 | 104 | 399 | 3.28e-22 | 95.5 |
MS.gene68902.t1 | AT1G61970 | 25.753 | 299 | 179 | 6 | 1 | 259 | 104 | 399 | 3.28e-22 | 95.5 |
MS.gene68902.t1 | AT1G61970 | 25.753 | 299 | 179 | 6 | 1 | 259 | 104 | 399 | 3.28e-22 | 95.5 |
MS.gene68902.t1 | AT1G61970 | 25.753 | 299 | 179 | 6 | 1 | 259 | 104 | 399 | 3.28e-22 | 95.5 |
MS.gene68902.t1 | AT1G61970 | 25.753 | 299 | 179 | 6 | 1 | 259 | 104 | 399 | 3.28e-22 | 95.5 |
MS.gene68902.t1 | AT1G61970 | 25.753 | 299 | 179 | 6 | 1 | 259 | 104 | 399 | 3.28e-22 | 95.5 |
MS.gene68902.t1 | AT1G62120 | 24.510 | 306 | 188 | 6 | 1 | 265 | 108 | 411 | 1.08e-21 | 94.4 |
MS.gene68902.t1 | AT1G62085 | 25.507 | 345 | 171 | 10 | 1 | 265 | 107 | 445 | 1.59e-20 | 91.3 |
MS.gene68902.t1 | AT1G62085 | 25.507 | 345 | 171 | 10 | 1 | 265 | 107 | 445 | 1.59e-20 | 91.3 |
MS.gene68902.t1 | AT1G61990 | 25.321 | 312 | 187 | 5 | 1 | 273 | 104 | 408 | 1.67e-20 | 90.9 |
MS.gene68902.t1 | AT1G61990 | 25.321 | 312 | 187 | 5 | 1 | 273 | 104 | 408 | 1.67e-20 | 90.9 |
MS.gene68902.t1 | AT1G61960 | 24.069 | 349 | 188 | 8 | 1 | 273 | 104 | 451 | 4.48e-17 | 81.3 |
MS.gene68902.t1 | AT5G23930 | 23.284 | 335 | 181 | 8 | 1 | 264 | 107 | 436 | 1.67e-15 | 76.6 |
MS.gene68902.t1 | AT1G62110 | 27.835 | 194 | 133 | 3 | 1 | 189 | 104 | 295 | 5.70e-15 | 75.1 |
Find 48 sgRNAs with CRISPR-Local
Find 67 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCAATCTGACAAGGAAATTT+TGG | 0.119034 | 2.4:-55019273 | MS.gene68902:CDS |
TAAATTTAGTGATGAACTTT+TGG | 0.199642 | 2.4:-55018902 | MS.gene68902:CDS |
GTGAAGGAATTAAAGGATTT+GGG | 0.230293 | 2.4:-55019098 | MS.gene68902:CDS |
AGACCAACCCCATTTCTTAA+AGG | 0.251996 | 2.4:+55018989 | None:intergenic |
GGTATTGATTACTGTTGTTT+TGG | 0.274832 | 2.4:+55019034 | None:intergenic |
TGACAAAATATAAGGTGTTT+TGG | 0.274912 | 2.4:+55018845 | None:intergenic |
GGTGAAGGAATTAAAGGATT+TGG | 0.282534 | 2.4:-55019099 | MS.gene68902:CDS |
ATGGATGTTAACATACAATA+AGG | 0.292032 | 2.4:+55018933 | None:intergenic |
AGGTTGGGACTATTTGATTC+TGG | 0.292547 | 2.4:+55019318 | None:intergenic |
AAACTTTGGCAACACCGTTT+TGG | 0.327649 | 2.4:+55019424 | None:intergenic |
AAACTTACTGACAAAATATA+AGG | 0.343939 | 2.4:+55018837 | None:intergenic |
AAGTTGATACCTTTAAGAAA+TGG | 0.365182 | 2.4:-55018998 | MS.gene68902:CDS |
AGTTGATACCTTTAAGAAAT+GGG | 0.365271 | 2.4:-55018997 | MS.gene68902:CDS |
TTGGGTCAATCAGTTGGGTT+GGG | 0.365374 | 2.4:-55018883 | MS.gene68902:CDS |
CAAGTCGGTGAAGGAATTAA+AGG | 0.378802 | 2.4:-55019105 | MS.gene68902:CDS |
AACTTATCAGTCACTACAAA+TGG | 0.416436 | 2.4:+55018729 | None:intergenic |
GTCAGAGGTAGAAGCACCTT+TGG | 0.417863 | 2.4:+55019388 | None:intergenic |
AATAGTCCCAACCTATGAAT+TGG | 0.421560 | 2.4:-55019309 | MS.gene68902:CDS |
TATCAACTTTCTCTTTCCAT+AGG | 0.439630 | 2.4:+55019012 | None:intergenic |
GGTTTGCAGGAAAGCAGCTC+TGG | 0.441213 | 2.4:+55019449 | None:intergenic |
ATCACAATGCTGATTGAGAA+TGG | 0.457142 | 2.4:-55019197 | MS.gene68902:CDS |
GGAAAGCAGCTCTGGCATCT+TGG | 0.471973 | 2.4:+55019457 | None:intergenic |
GAATCTGTACACCAATTCAT+AGG | 0.478001 | 2.4:+55019298 | None:intergenic |
TTTGGGTCAATCAGTTGGGT+TGG | 0.480856 | 2.4:-55018884 | MS.gene68902:CDS |
CTGTACACCAATTCATAGGT+TGG | 0.484595 | 2.4:+55019302 | None:intergenic |
AGGCTTGCATACAAAACTCT+AGG | 0.506576 | 2.4:+55019341 | None:intergenic |
TCAGTTGGGTTGGGATGCTA+TGG | 0.506950 | 2.4:-55018874 | MS.gene68902:CDS |
TGTACACCAATTCATAGGTT+GGG | 0.507173 | 2.4:+55019303 | None:intergenic |
TCACAATGCTGATTGAGAAT+GGG | 0.508211 | 2.4:-55019196 | MS.gene68902:CDS |
CAACAGTAATCAATACCCTA+TGG | 0.513109 | 2.4:-55019028 | MS.gene68902:CDS |
ATCAACTTTCTCTTTCCATA+GGG | 0.529759 | 2.4:+55019013 | None:intergenic |
GTGCAATTTCTTCTCAACAA+AGG | 0.536369 | 2.4:-55018783 | MS.gene68902:CDS |
TTCCTGCAAACCCTCCAAAA+CGG | 0.545667 | 2.4:-55019438 | MS.gene68902:CDS |
GTTGATACCTTTAAGAAATG+GGG | 0.553181 | 2.4:-55018996 | MS.gene68902:CDS |
TTGGGACTATTTGATTCTGG+AGG | 0.560239 | 2.4:+55019321 | None:intergenic |
AATTGCACAACAGCGGCCCT+CGG | 0.562081 | 2.4:+55018798 | None:intergenic |
CAGATTCTTGCAATCTGACA+AGG | 0.575407 | 2.4:-55019282 | MS.gene68902:CDS |
CATTGCTGAGGGAACAGACT+CGG | 0.581919 | 2.4:-55019151 | MS.gene68902:CDS |
ATACCTTTAAGAAATGGGGT+TGG | 0.587688 | 2.4:-55018992 | MS.gene68902:CDS |
TGAAGGAATTAAAGGATTTG+GGG | 0.597102 | 2.4:-55019097 | MS.gene68902:CDS |
TGACATGCTCAAGTCGGTGA+AGG | 0.598383 | 2.4:-55019114 | MS.gene68902:CDS |
AAACATTAAAACATTGCTGA+GGG | 0.598387 | 2.4:-55019162 | MS.gene68902:CDS |
GGCTTGCATACAAAACTCTA+GGG | 0.606205 | 2.4:+55019342 | None:intergenic |
GACAATGTTAACAATGTCAG+AGG | 0.618058 | 2.4:+55019373 | None:intergenic |
CACAATGCTGATTGAGAATG+GGG | 0.632348 | 2.4:-55019195 | MS.gene68902:CDS |
GAGAAGAAATTGCACAACAG+CGG | 0.635644 | 2.4:+55018791 | None:intergenic |
CAAACATTAAAACATTGCTG+AGG | 0.635961 | 2.4:-55019163 | MS.gene68902:CDS |
GAGACGTGACATGCTCAAGT+CGG | 0.666473 | 2.4:-55019120 | MS.gene68902:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | CACTAAATTTATTTTTTCAA+TGG | + | chr2.4:55019197-55019216 | None:intergenic | 15.0% |
!! | AAACTTACTGACAAAATATA+AGG | + | chr2.4:55019274-55019293 | None:intergenic | 20.0% |
!!! | AAATTTAGTGATGAACTTTT+GGG | - | chr2.4:55019207-55019226 | MS.gene68902:CDS | 20.0% |
!!! | TAAATTTAGTGATGAACTTT+TGG | - | chr2.4:55019206-55019225 | MS.gene68902:CDS | 20.0% |
!!! | TTATATTTTGTCAGTAAGTT+TGG | - | chr2.4:55019273-55019292 | MS.gene68902:CDS | 20.0% |
!!! | TTATCTTTTAAAGTTGTATG+AGG | - | chr2.4:55019444-55019463 | MS.gene68902:CDS | 20.0% |
! | AAACATTAAAACATTGCTGA+GGG | - | chr2.4:55018946-55018965 | MS.gene68902:CDS | 25.0% |
! | ATGGATGTTAACATACAATA+AGG | + | chr2.4:55019178-55019197 | None:intergenic | 25.0% |
! | GAGAGAAAAAATTGAAACTT+TGG | + | chr2.4:55018701-55018720 | None:intergenic | 25.0% |
!! | AATCCTTCAAAAACAACTTT+TGG | - | chr2.4:55019037-55019056 | MS.gene68902:CDS | 25.0% |
!! | AGTTGATACCTTTAAGAAAT+GGG | - | chr2.4:55019111-55019130 | MS.gene68902:CDS | 25.0% |
!!! | AAGTTGATACCTTTAAGAAA+TGG | - | chr2.4:55019110-55019129 | MS.gene68902:CDS | 25.0% |
!!! | TATAAAACGTTTTGAGAATG+AGG | - | chr2.4:55019417-55019436 | MS.gene68902:CDS | 25.0% |
!!! | TGACAAAATATAAGGTGTTT+TGG | + | chr2.4:55019266-55019285 | None:intergenic | 25.0% |
!!! | TTTCAATTTTTTCTCTCCAA+AGG | - | chr2.4:55018704-55018723 | MS.gene68902:CDS | 25.0% |
AACTTATCAGTCACTACAAA+TGG | + | chr2.4:55019382-55019401 | None:intergenic | 30.0% | |
ATCAACTTTCTCTTTCCATA+GGG | + | chr2.4:55019098-55019117 | None:intergenic | 30.0% | |
CAAACATTAAAACATTGCTG+AGG | - | chr2.4:55018945-55018964 | MS.gene68902:CDS | 30.0% | |
GTGAAGGAATTAAAGGATTT+GGG | - | chr2.4:55019010-55019029 | MS.gene68902:CDS | 30.0% | |
TATCAACTTTCTCTTTCCAT+AGG | + | chr2.4:55019099-55019118 | None:intergenic | 30.0% | |
TGAAGGAATTAAAGGATTTG+GGG | - | chr2.4:55019011-55019030 | MS.gene68902:CDS | 30.0% | |
TGTCAGTAAGTTTGGAAAAA+AGG | - | chr2.4:55019281-55019300 | MS.gene68902:CDS | 30.0% | |
! | GTTGATACCTTTAAGAAATG+GGG | - | chr2.4:55019112-55019131 | MS.gene68902:CDS | 30.0% |
!!! | AATATAAGGTGTTTTGGCAA+TGG | + | chr2.4:55019260-55019279 | None:intergenic | 30.0% |
!!! | GGTATTGATTACTGTTGTTT+TGG | + | chr2.4:55019077-55019096 | None:intergenic | 30.0% |
AATAGTCCCAACCTATGAAT+TGG | - | chr2.4:55018799-55018818 | MS.gene68902:CDS | 35.0% | |
CAACAGTAATCAATACCCTA+TGG | - | chr2.4:55019080-55019099 | MS.gene68902:CDS | 35.0% | |
GAATCTGTACACCAATTCAT+AGG | + | chr2.4:55018813-55018832 | None:intergenic | 35.0% | |
GACAATGTTAACAATGTCAG+AGG | + | chr2.4:55018738-55018757 | None:intergenic | 35.0% | |
GGTGAAGGAATTAAAGGATT+TGG | - | chr2.4:55019009-55019028 | MS.gene68902:CDS | 35.0% | |
GTGCAATTTCTTCTCAACAA+AGG | - | chr2.4:55019325-55019344 | MS.gene68902:CDS | 35.0% | |
TATGAGGAAAAACGCAATCT+AGG | - | chr2.4:55019460-55019479 | MS.gene68902:CDS | 35.0% | |
TGTACACCAATTCATAGGTT+GGG | + | chr2.4:55018808-55018827 | None:intergenic | 35.0% | |
! | ATACCTTTAAGAAATGGGGT+TGG | - | chr2.4:55019116-55019135 | MS.gene68902:CDS | 35.0% |
! | ATCACAATGCTGATTGAGAA+TGG | - | chr2.4:55018911-55018930 | MS.gene68902:CDS | 35.0% |
! | GCAATCTGACAAGGAAATTT+TGG | - | chr2.4:55018835-55018854 | MS.gene68902:CDS | 35.0% |
! | TCACAATGCTGATTGAGAAT+GGG | - | chr2.4:55018912-55018931 | MS.gene68902:CDS | 35.0% |
!! | AACTTTTGGGTCAATCAGTT+GGG | - | chr2.4:55019220-55019239 | MS.gene68902:CDS | 35.0% |
!!! | GCACCAAAAGTTGTTTTTGA+AGG | + | chr2.4:55019043-55019062 | None:intergenic | 35.0% |
AGACCAACCCCATTTCTTAA+AGG | + | chr2.4:55019122-55019141 | None:intergenic | 40.0% | |
AGGCTTGCATACAAAACTCT+AGG | + | chr2.4:55018770-55018789 | None:intergenic | 40.0% | |
AGGTTGGGACTATTTGATTC+TGG | + | chr2.4:55018793-55018812 | None:intergenic | 40.0% | |
CAAGTCGGTGAAGGAATTAA+AGG | - | chr2.4:55019003-55019022 | MS.gene68902:CDS | 40.0% | |
CAGATTCTTGCAATCTGACA+AGG | - | chr2.4:55018826-55018845 | MS.gene68902:CDS | 40.0% | |
CTGTACACCAATTCATAGGT+TGG | + | chr2.4:55018809-55018828 | None:intergenic | 40.0% | |
GAGAAGAAATTGCACAACAG+CGG | + | chr2.4:55019320-55019339 | None:intergenic | 40.0% | |
GGAAAAAAGGATCATTCCGA+GGG | - | chr2.4:55019294-55019313 | MS.gene68902:CDS | 40.0% | |
GGCTTGCATACAAAACTCTA+GGG | + | chr2.4:55018769-55018788 | None:intergenic | 40.0% | |
TGGAAAAAAGGATCATTCCG+AGG | - | chr2.4:55019293-55019312 | MS.gene68902:CDS | 40.0% | |
TTGGGACTATTTGATTCTGG+AGG | + | chr2.4:55018790-55018809 | None:intergenic | 40.0% | |
! | AAACTTTGGCAACACCGTTT+TGG | + | chr2.4:55018687-55018706 | None:intergenic | 40.0% |
! | CACAATGCTGATTGAGAATG+GGG | - | chr2.4:55018913-55018932 | MS.gene68902:CDS | 40.0% |
!! | GAACTTTTGGGTCAATCAGT+TGG | - | chr2.4:55019219-55019238 | MS.gene68902:CDS | 40.0% |
TTCCTGCAAACCCTCCAAAA+CGG | - | chr2.4:55018670-55018689 | MS.gene68902:CDS | 45.0% | |
TTGGGTCAATCAGTTGGGTT+GGG | - | chr2.4:55019225-55019244 | MS.gene68902:CDS | 45.0% | |
TTTGGGTCAATCAGTTGGGT+TGG | - | chr2.4:55019224-55019243 | MS.gene68902:CDS | 45.0% | |
!! | TTTGGCAACACCGTTTTGGA+GGG | + | chr2.4:55018683-55018702 | None:intergenic | 45.0% |
CATTGCTGAGGGAACAGACT+CGG | - | chr2.4:55018957-55018976 | MS.gene68902:CDS | 50.0% | |
GAGACGTGACATGCTCAAGT+CGG | - | chr2.4:55018988-55019007 | MS.gene68902:CDS | 50.0% | |
TGACATGCTCAAGTCGGTGA+AGG | - | chr2.4:55018994-55019013 | MS.gene68902:CDS | 50.0% | |
! | CTTTGGCAACACCGTTTTGG+AGG | + | chr2.4:55018684-55018703 | None:intergenic | 50.0% |
!! | GTCAGAGGTAGAAGCACCTT+TGG | + | chr2.4:55018723-55018742 | None:intergenic | 50.0% |
!! | TCAGTTGGGTTGGGATGCTA+TGG | - | chr2.4:55019234-55019253 | MS.gene68902:CDS | 50.0% |
AATTGCACAACAGCGGCCCT+CGG | + | chr2.4:55019313-55019332 | None:intergenic | 55.0% | |
GGTTTGCAGGAAAGCAGCTC+TGG | + | chr2.4:55018662-55018681 | None:intergenic | 55.0% | |
! | GGAAAGCAGCTCTGGCATCT+TGG | + | chr2.4:55018654-55018673 | None:intergenic | 55.0% |
!!! | CACCGTTTTGGAGGGTTTGC+AGG | + | chr2.4:55018675-55018694 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 55018644 | 55019486 | 55018644 | ID=MS.gene68902 |
chr2.4 | mRNA | 55018644 | 55019486 | 55018644 | ID=MS.gene68902.t1;Parent=MS.gene68902 |
chr2.4 | exon | 55018644 | 55019486 | 55018644 | ID=MS.gene68902.t1.exon1;Parent=MS.gene68902.t1 |
chr2.4 | CDS | 55018644 | 55019486 | 55018644 | ID=cds.MS.gene68902.t1;Parent=MS.gene68902.t1 |
Gene Sequence |
Protein sequence |