Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69022.t1 | XP_024632961.1 | 84.9 | 793 | 92 | 4 | 1 | 765 | 1 | 793 | 0.00E+00 | 1346.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69022.t1 | Q9SZL8 | 27.0 | 636 | 394 | 11 | 32 | 665 | 70 | 637 | 2.1e-63 | 245.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69022.t1 | D3YBB9 | 76.7 | 774 | 160 | 4 | 1 | 764 | 49 | 812 | 0.0e+00 | 1192.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene69022.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69022.t1 | MTR_0558s0020 | 88.176 | 296 | 34 | 1 | 1 | 295 | 1 | 296 | 0.0 | 551 |
MS.gene69022.t1 | MTR_1g083640 | 83.803 | 284 | 30 | 1 | 1 | 268 | 1 | 284 | 1.23e-173 | 500 |
MS.gene69022.t1 | MTR_8g446020 | 74.237 | 295 | 37 | 1 | 1 | 295 | 1 | 256 | 3.69e-153 | 446 |
MS.gene69022.t1 | MTR_6g090505 | 84.388 | 237 | 37 | 0 | 65 | 301 | 1 | 237 | 1.36e-143 | 426 |
MS.gene69022.t1 | MTR_6g090505 | 67.647 | 102 | 6 | 2 | 396 | 495 | 230 | 306 | 3.82e-34 | 134 |
MS.gene69022.t1 | MTR_6g090505 | 75.510 | 49 | 12 | 0 | 567 | 615 | 314 | 362 | 8.66e-11 | 64.7 |
MS.gene69022.t1 | MTR_2g014100 | 82.857 | 245 | 33 | 1 | 1 | 236 | 1 | 245 | 9.64e-143 | 419 |
MS.gene69022.t1 | MTR_0337s0040 | 72.692 | 260 | 31 | 2 | 1 | 259 | 1 | 221 | 9.77e-125 | 372 |
MS.gene69022.t1 | MTR_3g008240 | 85.222 | 203 | 29 | 1 | 1 | 202 | 1 | 203 | 5.07e-119 | 357 |
MS.gene69022.t1 | MTR_4g040430 | 84.653 | 202 | 27 | 1 | 1 | 202 | 1 | 198 | 1.63e-118 | 355 |
MS.gene69022.t1 | MTR_0337s0060 | 58.544 | 316 | 31 | 4 | 447 | 759 | 21 | 239 | 6.68e-108 | 329 |
MS.gene69022.t1 | MTR_5g071590 | 74.444 | 180 | 33 | 2 | 1 | 167 | 1 | 180 | 1.68e-90 | 282 |
MS.gene69022.t1 | MTR_1g055240 | 88.732 | 142 | 16 | 0 | 91 | 232 | 3 | 144 | 1.93e-87 | 273 |
MS.gene69022.t1 | MTR_0019s0290 | 82.895 | 152 | 26 | 0 | 82 | 233 | 9 | 160 | 1.58e-86 | 270 |
MS.gene69022.t1 | MTR_3g028680 | 80.132 | 151 | 27 | 1 | 618 | 765 | 1 | 151 | 3.88e-79 | 252 |
MS.gene69022.t1 | MTR_2g067090 | 77.027 | 148 | 31 | 1 | 621 | 765 | 99 | 246 | 3.68e-70 | 232 |
MS.gene69022.t1 | MTR_4g133495 | 60.204 | 196 | 50 | 4 | 576 | 768 | 88 | 258 | 2.31e-65 | 219 |
MS.gene69022.t1 | MTR_4g133340 | 60.204 | 196 | 50 | 4 | 576 | 768 | 88 | 258 | 2.31e-65 | 219 |
MS.gene69022.t1 | MTR_1281s0010 | 81.651 | 109 | 20 | 0 | 19 | 127 | 1 | 109 | 7.68e-57 | 189 |
MS.gene69022.t1 | MTR_6g051425 | 32.075 | 318 | 185 | 6 | 40 | 341 | 22 | 324 | 1.94e-38 | 146 |
MS.gene69022.t1 | MTR_4g008820 | 83.750 | 80 | 12 | 1 | 1 | 79 | 125 | 204 | 1.94e-31 | 131 |
MS.gene69022.t1 | MTR_8g046060 | 77.273 | 88 | 11 | 2 | 1 | 79 | 91 | 178 | 3.68e-31 | 122 |
MS.gene69022.t1 | MTR_1g070355 | 26.852 | 324 | 216 | 6 | 41 | 362 | 80 | 384 | 1.56e-19 | 93.6 |
MS.gene69022.t1 | MTR_2g067130 | 62.162 | 74 | 22 | 2 | 695 | 765 | 46 | 116 | 1.89e-18 | 83.6 |
MS.gene69022.t1 | MTR_0402s0040 | 25.405 | 185 | 119 | 4 | 49 | 233 | 40 | 205 | 2.85e-14 | 76.6 |
MS.gene69022.t1 | MTR_0337s0050 | 75.000 | 36 | 9 | 0 | 259 | 294 | 14 | 49 | 1.69e-13 | 66.6 |
MS.gene69022.t1 | MTR_4g035820 | 22.414 | 290 | 192 | 7 | 17 | 299 | 61 | 324 | 1.64e-12 | 71.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69022.t1 | AT4G38180 | 27.769 | 641 | 383 | 13 | 32 | 665 | 70 | 637 | 7.83e-70 | 245 |
MS.gene69022.t1 | AT4G15090 | 25.260 | 673 | 422 | 14 | 50 | 718 | 66 | 661 | 4.91e-59 | 215 |
MS.gene69022.t1 | AT4G15090 | 25.260 | 673 | 422 | 14 | 50 | 718 | 66 | 661 | 4.91e-59 | 215 |
MS.gene69022.t1 | AT4G15090 | 25.260 | 673 | 422 | 14 | 50 | 718 | 66 | 661 | 4.91e-59 | 215 |
MS.gene69022.t1 | AT4G15090 | 25.260 | 673 | 422 | 14 | 50 | 718 | 66 | 661 | 4.91e-59 | 215 |
MS.gene69022.t1 | AT4G15090 | 25.260 | 673 | 422 | 14 | 50 | 718 | 66 | 661 | 4.91e-59 | 215 |
MS.gene69022.t1 | AT2G27110 | 25.070 | 714 | 423 | 19 | 10 | 719 | 29 | 634 | 3.21e-53 | 199 |
MS.gene69022.t1 | AT2G27110 | 25.070 | 714 | 423 | 19 | 10 | 719 | 29 | 634 | 3.21e-53 | 199 |
MS.gene69022.t1 | AT2G27110 | 27.308 | 509 | 313 | 11 | 213 | 719 | 36 | 489 | 1.24e-52 | 195 |
MS.gene69022.t1 | AT3G06250 | 25.118 | 633 | 351 | 16 | 34 | 661 | 189 | 703 | 1.01e-51 | 193 |
MS.gene69022.t1 | AT3G06250 | 25.118 | 633 | 351 | 16 | 34 | 661 | 189 | 703 | 1.01e-51 | 193 |
MS.gene69022.t1 | AT3G06250 | 25.118 | 633 | 351 | 16 | 34 | 661 | 189 | 703 | 1.01e-51 | 193 |
MS.gene69022.t1 | AT1G76320 | 24.890 | 679 | 408 | 19 | 50 | 719 | 12 | 597 | 1.86e-49 | 185 |
MS.gene69022.t1 | AT1G76320 | 24.890 | 679 | 408 | 19 | 50 | 719 | 12 | 597 | 4.76e-49 | 185 |
MS.gene69022.t1 | AT1G76320 | 24.890 | 679 | 408 | 19 | 50 | 719 | 12 | 597 | 5.09e-49 | 185 |
MS.gene69022.t1 | AT1G76320 | 24.890 | 679 | 408 | 19 | 50 | 719 | 12 | 597 | 5.09e-49 | 185 |
MS.gene69022.t1 | AT3G22170 | 22.345 | 725 | 456 | 16 | 34 | 753 | 69 | 691 | 8.98e-48 | 182 |
MS.gene69022.t1 | AT3G22170 | 22.345 | 725 | 456 | 16 | 34 | 753 | 69 | 691 | 8.98e-48 | 182 |
MS.gene69022.t1 | AT5G18960 | 24.730 | 647 | 359 | 18 | 24 | 661 | 200 | 727 | 3.71e-46 | 177 |
MS.gene69022.t1 | AT5G18960 | 24.730 | 647 | 359 | 18 | 24 | 661 | 200 | 727 | 3.71e-46 | 177 |
MS.gene69022.t1 | AT4G38170 | 25.349 | 430 | 263 | 11 | 235 | 661 | 24 | 398 | 1.60e-43 | 166 |
MS.gene69022.t1 | AT1G10240 | 24.719 | 623 | 377 | 19 | 49 | 659 | 62 | 604 | 2.05e-42 | 165 |
MS.gene69022.t1 | AT1G10240 | 24.719 | 623 | 377 | 19 | 49 | 659 | 62 | 604 | 2.05e-42 | 165 |
MS.gene69022.t1 | AT5G28530 | 24.570 | 639 | 385 | 17 | 40 | 660 | 60 | 619 | 4.76e-42 | 164 |
MS.gene69022.t1 | AT5G28530 | 24.413 | 639 | 382 | 18 | 40 | 660 | 60 | 615 | 3.52e-41 | 161 |
MS.gene69022.t1 | AT5G28530 | 24.413 | 639 | 382 | 18 | 40 | 660 | 60 | 615 | 3.52e-41 | 161 |
MS.gene69022.t1 | AT2G32250 | 23.624 | 745 | 432 | 20 | 4 | 743 | 10 | 622 | 8.94e-40 | 157 |
MS.gene69022.t1 | AT2G32250 | 23.624 | 745 | 432 | 20 | 4 | 743 | 10 | 622 | 9.43e-40 | 158 |
MS.gene69022.t1 | AT2G32250 | 23.624 | 745 | 432 | 20 | 4 | 743 | 10 | 622 | 9.43e-40 | 158 |
MS.gene69022.t1 | AT2G32250 | 23.624 | 745 | 432 | 20 | 4 | 743 | 10 | 622 | 9.43e-40 | 158 |
MS.gene69022.t1 | AT2G32250 | 23.624 | 745 | 432 | 20 | 4 | 743 | 10 | 622 | 1.07e-39 | 157 |
MS.gene69022.t1 | AT2G32250 | 23.624 | 745 | 432 | 20 | 4 | 743 | 10 | 622 | 1.07e-39 | 157 |
MS.gene69022.t1 | AT2G32250 | 23.588 | 708 | 407 | 18 | 41 | 743 | 3 | 581 | 5.57e-39 | 155 |
MS.gene69022.t1 | AT2G32250 | 23.588 | 708 | 407 | 18 | 41 | 743 | 3 | 581 | 6.38e-39 | 155 |
MS.gene69022.t1 | AT1G80010 | 23.795 | 643 | 385 | 23 | 41 | 661 | 101 | 660 | 5.04e-36 | 145 |
MS.gene69022.t1 | AT1G52520 | 22.151 | 623 | 405 | 16 | 41 | 660 | 91 | 636 | 5.47e-33 | 136 |
MS.gene69022.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 2.39e-27 | 119 |
MS.gene69022.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.20e-12 | 71.2 |
MS.gene69022.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 106 | 369 | 2.54e-27 | 118 |
MS.gene69022.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 438 | 558 | 1.98e-12 | 71.2 |
MS.gene69022.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 177 | 440 | 2.80e-27 | 119 |
MS.gene69022.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 509 | 629 | 2.36e-12 | 71.2 |
MS.gene69022.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 2.85e-27 | 119 |
MS.gene69022.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.14e-12 | 71.2 |
MS.gene69022.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 2.85e-27 | 119 |
MS.gene69022.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.14e-12 | 71.2 |
MS.gene69022.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 3.55e-27 | 118 |
MS.gene69022.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.13e-12 | 71.2 |
MS.gene69022.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 3.55e-27 | 118 |
MS.gene69022.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.13e-12 | 71.2 |
MS.gene69022.t1 | AT5G28530 | 22.258 | 629 | 349 | 20 | 40 | 660 | 60 | 556 | 6.55e-23 | 104 |
MS.gene69022.t1 | AT5G28530 | 22.099 | 629 | 346 | 21 | 40 | 660 | 60 | 552 | 4.70e-22 | 101 |
Find 116 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATGCTGAGTTGGACTTTA+AGG | 0.133287 | 6.2:+86657888 | MS.gene69022:CDS |
TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 6.2:+86657579 | MS.gene69022:CDS |
AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 6.2:-86658714 | None:intergenic |
CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 6.2:+86657846 | MS.gene69022:CDS |
CAACAAGATTATGCTCTATT+TGG | 0.198611 | 6.2:+86656795 | MS.gene69022:CDS |
TTCATTTCAGCTGCCTTTCT+TGG | 0.201003 | 6.2:+86657298 | MS.gene69022:intron |
CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 6.2:+86657331 | MS.gene69022:CDS |
TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 6.2:-86657425 | None:intergenic |
TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 6.2:-86658708 | None:intergenic |
AATCAGATTTCGACTACAAT+TGG | 0.318540 | 6.2:+86657620 | MS.gene69022:CDS |
TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 6.2:+86658560 | MS.gene69022:CDS |
ACCAGCCTGGTCTGTGTATA+TGG | 0.341000 | 6.2:-86657443 | None:intergenic |
GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 6.2:-86656845 | None:intergenic |
GGTTTCGAATGTTGATGTTT+TGG | 0.354913 | 6.2:+86658143 | MS.gene69022:CDS |
TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 6.2:+86657720 | MS.gene69022:CDS |
CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 6.2:+86658552 | MS.gene69022:CDS |
AACAATAAATATCGGCCATT+AGG | 0.388497 | 6.2:+86656852 | MS.gene69022:CDS |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 6.2:+86656844 | MS.gene69022:CDS |
GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 6.2:+86657719 | MS.gene69022:CDS |
GTCTTTAGTGCCAACATTCA+TGG | 0.395146 | 6.2:-86658436 | None:intergenic |
TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 6.2:-86656315 | None:intergenic |
AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 6.2:+86658700 | MS.gene69022:CDS |
TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 6.2:-86658690 | None:intergenic |
TTCCTTCAAATACTATTATG+AGG | 0.399583 | 6.2:+86658020 | MS.gene69022:CDS |
GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 6.2:+86658585 | MS.gene69022:CDS |
TAAAGAATCATGGAAGTCTT+TGG | 0.408500 | 6.2:+86656086 | MS.gene69022:CDS |
CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 6.2:+86658268 | MS.gene69022:CDS |
GATTATGATCTTCAAACCTT+GGG | 0.413114 | 6.2:-86658191 | None:intergenic |
ATAACACTGGATTCTCTGTT+AGG | 0.417808 | 6.2:+86656157 | MS.gene69022:CDS |
CGATTATGATCTTCAAACCT+TGG | 0.425681 | 6.2:-86658192 | None:intergenic |
CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 6.2:+86656492 | MS.gene69022:CDS |
AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 6.2:+86656374 | MS.gene69022:CDS |
TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 6.2:-86657436 | None:intergenic |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 6.2:+86656357 | MS.gene69022:CDS |
CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 6.2:-86658369 | None:intergenic |
CGTTATGTTTGTAACAAAGA+AGG | 0.449439 | 6.2:+86656240 | MS.gene69022:CDS |
GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 6.2:+86656522 | MS.gene69022:CDS |
ATCTGAGAGTGGACAATTGA+CGG | 0.452529 | 6.2:+86656011 | MS.gene69022:CDS |
TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 6.2:+86657510 | MS.gene69022:CDS |
GGCCTACTTCGGACTTTAAG+TGG | 0.458978 | 6.2:+86657674 | MS.gene69022:CDS |
ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 6.2:+86658269 | MS.gene69022:CDS |
ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 6.2:+86656206 | MS.gene69022:CDS |
GGGTTGTCACAGTCGACATT+GGG | 0.480993 | 6.2:+86658226 | MS.gene69022:CDS |
GAAGTGATGGGTCAAGGAGT+TGG | 0.484292 | 6.2:+86656567 | MS.gene69022:CDS |
CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 6.2:-86658022 | None:intergenic |
TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 6.2:-86656351 | None:intergenic |
TTTAATTATGCATATAACAC+TGG | 0.485542 | 6.2:+86656144 | MS.gene69022:CDS |
CTGTCTGTGAACCATCTGTT+GGG | 0.487793 | 6.2:+86658661 | MS.gene69022:CDS |
TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 6.2:+86656635 | MS.gene69022:CDS |
CTCAAGTAGCACAAATGCTC+TGG | 0.489977 | 6.2:-86656462 | None:intergenic |
CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 6.2:+86656200 | MS.gene69022:CDS |
TATGAGGAGGACACAACAAA+AGG | 0.490908 | 6.2:+86658036 | MS.gene69022:CDS |
ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 6.2:-86657311 | None:intergenic |
ATCAGATTTCGACTACAATT+GGG | 0.491708 | 6.2:+86657621 | MS.gene69022:CDS |
CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 6.2:+86656648 | MS.gene69022:CDS |
ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 6.2:+86657860 | MS.gene69022:CDS |
GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 6.2:-86657940 | None:intergenic |
GAGAACATCTTATGAAGTGA+TGG | 0.499875 | 6.2:+86656554 | MS.gene69022:CDS |
TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 6.2:-86656740 | None:intergenic |
GCTGTCTGTGAACCATCTGT+TGG | 0.504047 | 6.2:+86658660 | MS.gene69022:CDS |
AAATGCTCTGGTTTATGTAA+TGG | 0.504865 | 6.2:-86656450 | None:intergenic |
CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 6.2:+86657707 | MS.gene69022:CDS |
ATCATAATCGACTTGATGAA+AGG | 0.507955 | 6.2:+86658205 | MS.gene69022:CDS |
TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 6.2:-86656606 | None:intergenic |
GAGGGATAATCATGCTGAGT+TGG | 0.508852 | 6.2:+86657879 | MS.gene69022:CDS |
ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 6.2:+86657725 | MS.gene69022:CDS |
TGTCTATAAGATATATAAGT+GGG | 0.514682 | 6.2:+86656410 | MS.gene69022:CDS |
GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 6.2:-86658185 | None:intergenic |
TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 6.2:-86657828 | None:intergenic |
TAACAAAGAAGGTTTCAAGA+AGG | 0.525236 | 6.2:+86656251 | MS.gene69022:CDS |
TCATAATCGACTTGATGAAA+GGG | 0.526860 | 6.2:+86658206 | MS.gene69022:CDS |
CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 6.2:-86658017 | None:intergenic |
AGGGTTGTCACAGTCGACAT+TGG | 0.538587 | 6.2:+86658225 | MS.gene69022:CDS |
AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 6.2:-86657823 | None:intergenic |
ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 6.2:+86658037 | MS.gene69022:CDS |
AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 6.2:+86656252 | MS.gene69022:CDS |
CATTTAGTGATAAAGAATCA+TGG | 0.546005 | 6.2:+86656076 | MS.gene69022:CDS |
ACTTCAACAACGCACCAGCC+TGG | 0.557139 | 6.2:-86657456 | None:intergenic |
CTGAAATCCACCATGAATGT+TGG | 0.557140 | 6.2:+86658426 | MS.gene69022:CDS |
AATGAAGCTCTCTCGAAACC+AGG | 0.565261 | 6.2:+86656702 | MS.gene69022:CDS |
TGAAAATTCAGTTATTGATG+CGG | 0.565546 | 6.2:+86656035 | MS.gene69022:CDS |
GTGATGGGTCAAGGAGTTGG+AGG | 0.568802 | 6.2:+86656570 | MS.gene69022:CDS |
TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 6.2:+86658512 | MS.gene69022:CDS |
ATGTCTATAAGATATATAAG+TGG | 0.572287 | 6.2:+86656409 | MS.gene69022:CDS |
GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 6.2:-86657941 | None:intergenic |
TTTGGTGCAGTCCCAACAGA+TGG | 0.581566 | 6.2:-86658672 | None:intergenic |
TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 6.2:-86657962 | None:intergenic |
ATATTAACTTCATCTGAGAG+TGG | 0.588105 | 6.2:+86656000 | MS.gene69022:CDS |
TCTTATGAAGTGATGGGTCA+AGG | 0.589029 | 6.2:+86656561 | MS.gene69022:CDS |
TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 6.2:+86658553 | MS.gene69022:CDS |
ACCATATACACAGACCAGGC+TGG | 0.590176 | 6.2:+86657442 | MS.gene69022:CDS |
ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 6.2:+86658548 | MS.gene69022:CDS |
TTGAAGAAAACCTTTCCCCA+AGG | 0.594796 | 6.2:+86658175 | MS.gene69022:CDS |
TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 6.2:-86658628 | None:intergenic |
GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 6.2:+86656641 | MS.gene69022:CDS |
AGAACATCTTATGAAGTGAT+GGG | 0.601988 | 6.2:+86656555 | MS.gene69022:CDS |
AACTCGTCAAAAGGAGATGG+TGG | 0.603142 | 6.2:+86656644 | MS.gene69022:CDS |
GATTTCAGCTTATCGACAGA+CGG | 0.603217 | 6.2:-86658411 | None:intergenic |
ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 6.2:+86658515 | MS.gene69022:CDS |
ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 6.2:+86657938 | MS.gene69022:CDS |
CTTCAAATACTATTATGAGG+AGG | 0.607664 | 6.2:+86658023 | MS.gene69022:CDS |
TTGATATCGTTGCGCTTCAG+TGG | 0.611060 | 6.2:-86658460 | None:intergenic |
AGAACTGGACTGTCACATGT+TGG | 0.620791 | 6.2:-86656300 | None:intergenic |
AGCCACTTAAAGTCCGAAGT+AGG | 0.621799 | 6.2:-86657676 | None:intergenic |
GGGTCAAGGAGTTGGAGGCA+CGG | 0.621882 | 6.2:+86656575 | MS.gene69022:CDS |
ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 6.2:-86658190 | None:intergenic |
GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 6.2:+86657511 | MS.gene69022:CDS |
TTTAGTGCCAACATTCATGG+TGG | 0.641441 | 6.2:-86658433 | None:intergenic |
CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 6.2:+86657861 | MS.gene69022:CDS |
TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 6.2:-86657982 | None:intergenic |
GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 6.2:+86658537 | MS.gene69022:CDS |
CATGTCGACATAAGAAACCC+CGG | 0.663279 | 6.2:-86658287 | None:intergenic |
TCAAACCATATACACAGACC+AGG | 0.671057 | 6.2:+86657438 | MS.gene69022:CDS |
TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 6.2:+86658270 | MS.gene69022:CDS |
ATGTTGATAATGATAATGAG+AGG | 0.683310 | 6.2:+86658121 | MS.gene69022:CDS |
TGTTGATAATGATAATGAGA+GGG | 0.689129 | 6.2:+86658122 | MS.gene69022:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAACCATAATTATAGTTTAA+TGG | - | chr6.2:86659067-86659086 | None:intergenic | 15.0% |
!! | AAACCATTAAACTATAATTA+TGG | + | chr6.2:86659061-86659080 | MS.gene69022:intron | 15.0% |
!!! | TGTTTTTTATGTTATAAGTT+AGG | + | chr6.2:86658840-86658859 | MS.gene69022:intron | 15.0% |
!! | ATGTCTATAAGATATATAAG+TGG | + | chr6.2:86656409-86656428 | MS.gene69022:CDS | 20.0% |
!! | CAATTCACAAAATAAGAAAT+CGG | + | chr6.2:86656200-86656219 | MS.gene69022:CDS | 20.0% |
!! | TGTCTATAAGATATATAAGT+GGG | + | chr6.2:86656410-86656429 | MS.gene69022:CDS | 20.0% |
!! | TTTAATTATGCATATAACAC+TGG | + | chr6.2:86656144-86656163 | MS.gene69022:CDS | 20.0% |
!!! | AATTTAATGTTCTGGTTTAT+GGG | + | chr6.2:86657027-86657046 | MS.gene69022:intron | 20.0% |
!!! | ATGATGAAAAACTGTTTTAA+TGG | + | chr6.2:86657649-86657668 | MS.gene69022:CDS | 20.0% |
!!! | CTATACATTTTCACATTTTT+TGG | + | chr6.2:86658983-86659002 | MS.gene69022:intron | 20.0% |
!!! | GCATTGGTTTTATTATATTT+TGG | + | chr6.2:86659034-86659053 | MS.gene69022:intron | 20.0% |
!!! | TGAATGTTTATATTGATTGA+AGG | + | chr6.2:86656999-86657018 | MS.gene69022:intron | 20.0% |
! | AAAACACCTTGAAAAACATT+CGG | - | chr6.2:86657487-86657506 | None:intergenic | 25.0% |
! | AATTCTTGATTGTTATGCAT+TGG | + | chr6.2:86658938-86658957 | MS.gene69022:intron | 25.0% |
! | ACAAAATAAGAAATCGGATA+AGG | + | chr6.2:86656206-86656225 | MS.gene69022:CDS | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | + | chr6.2:86656844-86656863 | MS.gene69022:CDS | 25.0% |
! | AGTACAAAATACTAACCTAA+TGG | - | chr6.2:86656870-86656889 | None:intergenic | 25.0% |
! | CATAATAGTATTTGAAGGAA+AGG | - | chr6.2:86658020-86658039 | None:intergenic | 25.0% |
! | CATTTAGTGATAAAGAATCA+TGG | + | chr6.2:86656076-86656095 | MS.gene69022:CDS | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | + | chr6.2:86657846-86657865 | MS.gene69022:CDS | 25.0% |
! | TGAAAATTCAGTTATTGATG+CGG | + | chr6.2:86656035-86656054 | MS.gene69022:CDS | 25.0% |
! | TGAAATTTGAATGAATGTTC+TGG | + | chr6.2:86656917-86656936 | MS.gene69022:intron | 25.0% |
! | TGAATAAATGAAAAGCAAGA+TGG | - | chr6.2:86657985-86658004 | None:intergenic | 25.0% |
! | TGATGCTTTAACTAAAAAAG+CGG | + | chr6.2:86658871-86658890 | MS.gene69022:intron | 25.0% |
! | TTCCTTCAAATACTATTATG+AGG | + | chr6.2:86658020-86658039 | MS.gene69022:CDS | 25.0% |
! | TTTCGATGAGTTAACTAATT+TGG | + | chr6.2:86657579-86657598 | MS.gene69022:CDS | 25.0% |
!! | AGGTTTAGAATTTAATGTTC+TGG | + | chr6.2:86657019-86657038 | MS.gene69022:intron | 25.0% |
!! | TGTTGTATTTTGTTCTGATT+TGG | + | chr6.2:86657275-86657294 | MS.gene69022:intron | 25.0% |
!! | TTGGTTTGAATATTATCTTC+TGG | + | chr6.2:86658957-86658976 | MS.gene69022:intron | 25.0% |
!! | TTTTCAATTACTGAGTTAAG+TGG | + | chr6.2:86659095-86659114 | MS.gene69022:intron | 25.0% |
!!! | ATGTTGATAATGATAATGAG+AGG | + | chr6.2:86658121-86658140 | MS.gene69022:CDS | 25.0% |
!!! | CTTATTTTGTGAATTGTTCT+TGG | - | chr6.2:86656196-86656215 | None:intergenic | 25.0% |
!!! | GAATTTAATGTTCTGGTTTA+TGG | + | chr6.2:86657026-86657045 | MS.gene69022:intron | 25.0% |
!!! | GCTTTAATAAATTCTAAAGC+TGG | + | chr6.2:86656522-86656541 | MS.gene69022:CDS | 25.0% |
!!! | TGAAAAACTGTTTTAATGGA+AGG | + | chr6.2:86657653-86657672 | MS.gene69022:CDS | 25.0% |
!!! | TGTTGATAATGATAATGAGA+GGG | + | chr6.2:86658122-86658141 | MS.gene69022:CDS | 25.0% |
!!! | TTTGGTTTTAACGCATTTTT+TGG | + | chr6.2:86659001-86659020 | MS.gene69022:intron | 25.0% |
AAACACATATGATCTTTCCA+TGG | - | chr6.2:86657090-86657109 | None:intergenic | 30.0% | |
AACAAAGAAGGTTTCAAGAA+GGG | + | chr6.2:86656252-86656271 | MS.gene69022:CDS | 30.0% | |
AACAATAAATATCGGCCATT+AGG | + | chr6.2:86656852-86656871 | MS.gene69022:CDS | 30.0% | |
AAGAAAGACCAAATCCAATT+AGG | + | chr6.2:86658700-86658719 | MS.gene69022:CDS | 30.0% | |
AATCAGATTTCGACTACAAT+TGG | + | chr6.2:86657620-86657639 | MS.gene69022:CDS | 30.0% | |
AGAACATCTTATGAAGTGAT+GGG | + | chr6.2:86656555-86656574 | MS.gene69022:CDS | 30.0% | |
ATATTAACTTCATCTGAGAG+TGG | + | chr6.2:86656000-86656019 | MS.gene69022:CDS | 30.0% | |
ATCAGATTTCGACTACAATT+GGG | + | chr6.2:86657621-86657640 | MS.gene69022:CDS | 30.0% | |
ATGATTGTCAAAACCAAGAA+AGG | - | chr6.2:86657314-86657333 | None:intergenic | 30.0% | |
ATTATGATCTTCAAACCTTG+GGG | - | chr6.2:86658193-86658212 | None:intergenic | 30.0% | |
CAACAAGATTATGCTCTATT+TGG | + | chr6.2:86656795-86656814 | MS.gene69022:CDS | 30.0% | |
CGTTATGTTTGTAACAAAGA+AGG | + | chr6.2:86656240-86656259 | MS.gene69022:CDS | 30.0% | |
CTCCTCATAATAGTATTTGA+AGG | - | chr6.2:86658025-86658044 | None:intergenic | 30.0% | |
CTGGTATATGTGTGTTAATT+TGG | + | chr6.2:86656956-86656975 | MS.gene69022:intron | 30.0% | |
CTTCAAATACTATTATGAGG+AGG | + | chr6.2:86658023-86658042 | MS.gene69022:CDS | 30.0% | |
GAGAATGCAAAGAAAAATCT+CGG | + | chr6.2:86657535-86657554 | MS.gene69022:CDS | 30.0% | |
GATTATGATCTTCAAACCTT+GGG | - | chr6.2:86658194-86658213 | None:intergenic | 30.0% | |
GCCGATATTTATTGTTTGTT+CGG | - | chr6.2:86656848-86656867 | None:intergenic | 30.0% | |
TAAAGAAAAACCAGAGGAAA+GGG | + | chr6.2:86656341-86656360 | MS.gene69022:CDS | 30.0% | |
TAAAGAATCATGGAAGTCTT+TGG | + | chr6.2:86656086-86656105 | MS.gene69022:CDS | 30.0% | |
TAAAGAATCGAACAAGTGAA+TGG | - | chr6.2:86657831-86657850 | None:intergenic | 30.0% | |
TAACAAAGAAGGTTTCAAGA+AGG | + | chr6.2:86656251-86656270 | MS.gene69022:CDS | 30.0% | |
TGGATATCATAGTAAAAACC+TGG | - | chr6.2:86656723-86656742 | None:intergenic | 30.0% | |
TGGTGTATACTTGTTTACTA+CGG | - | chr6.2:86657965-86657984 | None:intergenic | 30.0% | |
TTCTTTGACCTAATTGGATT+TGG | - | chr6.2:86658711-86658730 | None:intergenic | 30.0% | |
TTTAAGTCCGAAAATCGAAA+AGG | - | chr6.2:86656609-86656628 | None:intergenic | 30.0% | |
TTTCTATTTACACAGCACAA+TGG | + | chr6.2:86657234-86657253 | MS.gene69022:intron | 30.0% | |
! | AAATGCTCTGGTTTATGTAA+TGG | - | chr6.2:86656453-86656472 | None:intergenic | 30.0% |
! | AGCTGGAATATATTTGAAGT+TGG | + | chr6.2:86656374-86656393 | MS.gene69022:CDS | 30.0% |
! | CAAAGTTTTCACAATTGAGA+AGG | + | chr6.2:86658080-86658099 | MS.gene69022:CDS | 30.0% |
! | GAATCTTCCTTTTCGATTTT+CGG | + | chr6.2:86656599-86656618 | MS.gene69022:CDS | 30.0% |
! | GCATCTGAAATATTTCTCAA+CGG | + | chr6.2:86658537-86658556 | MS.gene69022:CDS | 30.0% |
! | TATGGTTTGAGGTTTCTTAT+TGG | - | chr6.2:86657428-86657447 | None:intergenic | 30.0% |
! | TCAATTCCGAATGTTTTTCA+AGG | + | chr6.2:86657478-86657497 | MS.gene69022:CDS | 30.0% |
! | TCAGTTTTCAATTCAATGAG+TGG | - | chr6.2:86659239-86659258 | None:intergenic | 30.0% |
! | TGAGGCTTTAACAAATTAAG+CGG | + | chr6.2:86658809-86658828 | MS.gene69022:intron | 30.0% |
! | TTTGGTCTTTCTTTGAACTT+TGG | - | chr6.2:86658693-86658712 | None:intergenic | 30.0% |
!! | ACATGTTTTCAAGATTTTGG+AGG | + | chr6.2:86658305-86658324 | MS.gene69022:CDS | 30.0% |
!! | ATCATAATCGACTTGATGAA+AGG | + | chr6.2:86658205-86658224 | MS.gene69022:CDS | 30.0% |
!! | ATGTTCTGGTTTAGAATTGA+AGG | + | chr6.2:86656931-86656950 | MS.gene69022:intron | 30.0% |
!! | GAGGAGTTTCTTATTTCTAA+AGG | + | chr6.2:86658585-86658604 | MS.gene69022:CDS | 30.0% |
!! | TCATAATCGACTTGATGAAA+GGG | + | chr6.2:86658206-86658225 | MS.gene69022:CDS | 30.0% |
!! | TCGACATGTTTTCAAGATTT+TGG | + | chr6.2:86658302-86658321 | MS.gene69022:CDS | 30.0% |
!! | TTTTGGTTGAAACTATGCAT+TGG | + | chr6.2:86659018-86659037 | MS.gene69022:intron | 30.0% |
!!! | AAGACATAGCCAGTATTTTT+TGG | + | chr6.2:86656757-86656776 | MS.gene69022:CDS | 30.0% |
!!! | AGACATAGCCAGTATTTTTT+GGG | + | chr6.2:86656758-86656777 | MS.gene69022:CDS | 30.0% |
!!! | CTGCACAATATGTTTTAAAG+CGG | + | chr6.2:86658370-86658389 | MS.gene69022:CDS | 30.0% |
!!! | GTTTTTCAAGGTGTTTTTCA+TGG | + | chr6.2:86657490-86657509 | MS.gene69022:CDS | 30.0% |
ACATTATGGTTCAGAGAATG+AGG | + | chr6.2:86657860-86657879 | MS.gene69022:CDS | 35.0% | |
ATAACACTGGATTCTCTGTT+AGG | + | chr6.2:86656157-86656176 | MS.gene69022:CDS | 35.0% | |
CATAAATTCCAAGGCAAGAT+AGG | - | chr6.2:86657057-86657076 | None:intergenic | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | + | chr6.2:86657861-86657880 | MS.gene69022:CDS | 35.0% | |
CGAGAAGTAAATGAAGTTCA+AGG | + | chr6.2:86656492-86656511 | MS.gene69022:CDS | 35.0% | |
CGATTATGATCTTCAAACCT+TGG | - | chr6.2:86658195-86658214 | None:intergenic | 35.0% | |
CTAAAGAAAAACCAGAGGAA+AGG | + | chr6.2:86656340-86656359 | MS.gene69022:CDS | 35.0% | |
CTCATTCAAATCGTATGCAT+TGG | + | chr6.2:86657707-86657726 | MS.gene69022:CDS | 35.0% | |
GAAAGCTAAAGAAAAACCAG+AGG | + | chr6.2:86656335-86656354 | MS.gene69022:CDS | 35.0% | |
GAAGCAAAAGAAAGATGATG+AGG | + | chr6.2:86658791-86658810 | MS.gene69022:intron | 35.0% | |
GACAGAAATTCCTTATAGCT+CGG | + | chr6.2:86658766-86658785 | MS.gene69022:intron | 35.0% | |
GAGAACATCTTATGAAGTGA+TGG | + | chr6.2:86656554-86656573 | MS.gene69022:CDS | 35.0% | |
GTCTGCTTAATCCTAAAAAC+AGG | + | chr6.2:86656277-86656296 | MS.gene69022:CDS | 35.0% | |
TCTAATGACAACTCGTCAAA+AGG | + | chr6.2:86656635-86656654 | MS.gene69022:CDS | 35.0% | |
TGTACAGAGCATAAATTCCA+AGG | - | chr6.2:86657066-86657085 | None:intergenic | 35.0% | |
TTCTCATACTCAACAAGAAC+TGG | - | chr6.2:86656318-86656337 | None:intergenic | 35.0% | |
! | CATCGTAAGAGTGTGTTATT+TGG | + | chr6.2:86657331-86657350 | MS.gene69022:CDS | 35.0% |
! | GAGGCTTTAACAAATTAAGC+GGG | + | chr6.2:86658810-86658829 | MS.gene69022:intron | 35.0% |
! | GGTTTCGAATGTTGATGTTT+TGG | + | chr6.2:86658143-86658162 | MS.gene69022:CDS | 35.0% |
! | TCTTTCAATGCTTTTCTTCG+TGG | + | chr6.2:86657790-86657809 | MS.gene69022:CDS | 35.0% |
! | TGGTTTAGAATTGAAGGTTC+TGG | + | chr6.2:86656937-86656956 | MS.gene69022:intron | 35.0% |
! | TTTTAATGGAAGGCCTACTT+CGG | + | chr6.2:86657663-86657682 | MS.gene69022:CDS | 35.0% |
! | TTTTTCATGGTCTTTGCTCA+TGG | + | chr6.2:86657503-86657522 | MS.gene69022:CDS | 35.0% |
!! | ACTGCTTTTGAAGACTTAGA+AGG | - | chr6.2:86658639-86658658 | None:intergenic | 35.0% |
!! | CGCTTTAAAACATATTGTGC+AGG | - | chr6.2:86658372-86658391 | None:intergenic | 35.0% |
!! | TATGCATTGGTCTTCAGTTT+GGG | + | chr6.2:86657720-86657739 | MS.gene69022:CDS | 35.0% |
!! | TTCAAGATTTTGGAGGTCTT+AGG | + | chr6.2:86658312-86658331 | MS.gene69022:CDS | 35.0% |
!!! | AGACATCAGCTACTTTTGAT+TGG | + | chr6.2:86657374-86657393 | MS.gene69022:CDS | 35.0% |
!!! | CACAATATGTTTTAAAGCGG+TGG | + | chr6.2:86658373-86658392 | MS.gene69022:CDS | 35.0% |
AATCGAACAAGTGAATGGTC+TGG | - | chr6.2:86657826-86657845 | None:intergenic | 40.0% | |
ACCTATGATCTTTGCATAGC+TGG | - | chr6.2:86657184-86657203 | None:intergenic | 40.0% | |
AGTCGCTTCTTTGACCTAAT+TGG | - | chr6.2:86658717-86658736 | None:intergenic | 40.0% | |
ATCTGAGAGTGGACAATTGA+CGG | + | chr6.2:86656011-86656030 | MS.gene69022:CDS | 40.0% | |
ATGAGGAGGACACAACAAAA+GGG | + | chr6.2:86658037-86658056 | MS.gene69022:CDS | 40.0% | |
ATGTCGTATGTTTGAGAACC+GGG | + | chr6.2:86658269-86658288 | MS.gene69022:CDS | 40.0% | |
ATTTATGCTCTGTACAGCCA+TGG | + | chr6.2:86657070-86657089 | MS.gene69022:intron | 40.0% | |
ATTTCTCAACGGTGTTCTTG+AGG | + | chr6.2:86658548-86658567 | MS.gene69022:CDS | 40.0% | |
CATGTCGTATGTTTGAGAAC+CGG | + | chr6.2:86658268-86658287 | MS.gene69022:CDS | 40.0% | |
CTGAAATCCACCATGAATGT+TGG | + | chr6.2:86658426-86658445 | MS.gene69022:CDS | 40.0% | |
GATTTCAGCTTATCGACAGA+CGG | - | chr6.2:86658414-86658433 | None:intergenic | 40.0% | |
GTCAATTCTGATGTAATGCG+CGG | + | chr6.2:86659182-86659201 | MS.gene69022:intron | 40.0% | |
GTCTTTAGTGCCAACATTCA+TGG | - | chr6.2:86658439-86658458 | None:intergenic | 40.0% | |
TATGAGGAGGACACAACAAA+AGG | + | chr6.2:86658036-86658055 | MS.gene69022:CDS | 40.0% | |
TCAAACCATATACACAGACC+AGG | + | chr6.2:86657438-86657457 | MS.gene69022:CDS | 40.0% | |
TCCAGCTATGCAAAGATCAT+AGG | + | chr6.2:86657180-86657199 | MS.gene69022:intron | 40.0% | |
TCCATCTGCCCAAAAAATAC+TGG | - | chr6.2:86656769-86656788 | None:intergenic | 40.0% | |
TGGTCTGTGTATATGGTTTG+AGG | - | chr6.2:86657439-86657458 | None:intergenic | 40.0% | |
TTCATTTCAGCTGCCTTTCT+TGG | + | chr6.2:86657298-86657317 | MS.gene69022:intron | 40.0% | |
TTGAAGAAAACCTTTCCCCA+AGG | + | chr6.2:86658175-86658194 | MS.gene69022:CDS | 40.0% | |
TTTAGTGCCAACATTCATGG+TGG | - | chr6.2:86658436-86658455 | None:intergenic | 40.0% | |
TTTGCTTCTTCCGAGCTATA+AGG | - | chr6.2:86658779-86658798 | None:intergenic | 40.0% | |
! | TCATGCTGAGTTGGACTTTA+AGG | + | chr6.2:86657888-86657907 | MS.gene69022:CDS | 40.0% |
! | TGAAGACTTAGAAGGCGTAA+CGG | - | chr6.2:86658631-86658650 | None:intergenic | 40.0% |
!! | AAGATTTTGGAGGTCTTAGG+TGG | + | chr6.2:86658315-86658334 | MS.gene69022:CDS | 40.0% |
!! | GTATGCATTGGTCTTCAGTT+TGG | + | chr6.2:86657719-86657738 | MS.gene69022:CDS | 40.0% |
!! | TCACATGTTGGCCTGTTTTT+AGG | - | chr6.2:86656291-86656310 | None:intergenic | 40.0% |
!! | TCTTATGAAGTGATGGGTCA+AGG | + | chr6.2:86656561-86656580 | MS.gene69022:CDS | 40.0% |
AACTCGTCAAAAGGAGATGG+TGG | + | chr6.2:86656644-86656663 | MS.gene69022:CDS | 45.0% | |
AATGAAGCTCTCTCGAAACC+AGG | + | chr6.2:86656702-86656721 | MS.gene69022:CDS | 45.0% | |
AGAACTGGACTGTCACATGT+TGG | - | chr6.2:86656303-86656322 | None:intergenic | 45.0% | |
AGCCACTTAAAGTCCGAAGT+AGG | - | chr6.2:86657679-86657698 | None:intergenic | 45.0% | |
ATCCCAACAGTCAGCTTATG+CGG | + | chr6.2:86657938-86657957 | MS.gene69022:CDS | 45.0% | |
CATGTCGACATAAGAAACCC+CGG | - | chr6.2:86658290-86658309 | None:intergenic | 45.0% | |
CTCAAGTAGCACAAATGCTC+TGG | - | chr6.2:86656465-86656484 | None:intergenic | 45.0% | |
CTGTCTGTGAACCATCTGTT+GGG | + | chr6.2:86658661-86658680 | MS.gene69022:CDS | 45.0% | |
GAAAAACCAGAGGAAAGGGT+TGG | + | chr6.2:86656345-86656364 | MS.gene69022:CDS | 45.0% | |
GACAACTCGTCAAAAGGAGA+TGG | + | chr6.2:86656641-86656660 | MS.gene69022:CDS | 45.0% | |
GAGGGATAATCATGCTGAGT+TGG | + | chr6.2:86657879-86657898 | MS.gene69022:CDS | 45.0% | |
GATCTTCAAACCTTGGGGAA+AGG | - | chr6.2:86658188-86658207 | None:intergenic | 45.0% | |
TGTCGTATGTTTGAGAACCG+GGG | + | chr6.2:86658270-86658289 | MS.gene69022:CDS | 45.0% | |
TGTCTTCTGCAGCATCAACT+TGG | - | chr6.2:86656743-86656762 | None:intergenic | 45.0% | |
TGTTCTTGAGGCAGGGAAAA+AGG | + | chr6.2:86658560-86658579 | MS.gene69022:CDS | 45.0% | |
TTACAACCAACCCTTTCCTC+TGG | - | chr6.2:86656354-86656373 | None:intergenic | 45.0% | |
TTGATATCGTTGCGCTTCAG+TGG | - | chr6.2:86658463-86658482 | None:intergenic | 45.0% | |
! | GTGAGGTCACATTTTACAGC+TGG | + | chr6.2:86657742-86657761 | MS.gene69022:CDS | 45.0% |
!! | ATTGGTCTTCAGTTTGGGTG+AGG | + | chr6.2:86657725-86657744 | MS.gene69022:CDS | 45.0% |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | + | chr6.2:86656357-86656376 | MS.gene69022:CDS | 45.0% |
!!! | GCCAGTATTTTTTGGGCAGA+TGG | + | chr6.2:86656765-86656784 | MS.gene69022:CDS | 45.0% |
ACCAGCCTGGTCTGTGTATA+TGG | - | chr6.2:86657446-86657465 | None:intergenic | 50.0% | |
ACCATATACACAGACCAGGC+TGG | + | chr6.2:86657442-86657461 | MS.gene69022:CDS | 50.0% | |
AGGGTTGTCACAGTCGACAT+TGG | + | chr6.2:86658225-86658244 | MS.gene69022:CDS | 50.0% | |
GACCGCATAAGCTGACTGTT+GGG | - | chr6.2:86657943-86657962 | None:intergenic | 50.0% | |
GCTGTCTGTGAACCATCTGT+TGG | + | chr6.2:86658660-86658679 | MS.gene69022:CDS | 50.0% | |
GGCCTACTTCGGACTTTAAG+TGG | + | chr6.2:86657674-86657693 | MS.gene69022:CDS | 50.0% | |
GGGTTGTCACAGTCGACATT+GGG | + | chr6.2:86658226-86658245 | MS.gene69022:CDS | 50.0% | |
GGTCTTTGCTCATGGCACAT+GGG | + | chr6.2:86657511-86657530 | MS.gene69022:CDS | 50.0% | |
TACACGTGTTTGCGCAGATG+CGG | + | chr6.2:86658512-86658531 | MS.gene69022:CDS | 50.0% | |
TCAACGGTGTTCTTGAGGCA+GGG | + | chr6.2:86658553-86658572 | MS.gene69022:CDS | 50.0% | |
TGGGTGATCCTATCTTGCCT+TGG | + | chr6.2:86657046-86657065 | MS.gene69022:intron | 50.0% | |
TGGTCTTTGCTCATGGCACA+TGG | + | chr6.2:86657510-86657529 | MS.gene69022:CDS | 50.0% | |
! | TTTGGTGCAGTCCCAACAGA+TGG | - | chr6.2:86658675-86658694 | None:intergenic | 50.0% |
!! | GAAGTGATGGGTCAAGGAGT+TGG | + | chr6.2:86656567-86656586 | MS.gene69022:CDS | 50.0% |
ACTTCAACAACGCACCAGCC+TGG | - | chr6.2:86657459-86657478 | None:intergenic | 55.0% | |
CTCAACGGTGTTCTTGAGGC+AGG | + | chr6.2:86658552-86658571 | MS.gene69022:CDS | 55.0% | |
GGACCGCATAAGCTGACTGT+TGG | - | chr6.2:86657944-86657963 | None:intergenic | 55.0% | |
TGAGGCAGGGAAAAAGGCAG+AGG | + | chr6.2:86658566-86658585 | MS.gene69022:CDS | 55.0% | |
! | CGTCAAAAGGAGATGGTGGC+TGG | + | chr6.2:86656648-86656667 | MS.gene69022:CDS | 55.0% |
!! | GTGATGGGTCAAGGAGTTGG+AGG | + | chr6.2:86656570-86656589 | MS.gene69022:CDS | 55.0% |
ACGTGTTTGCGCAGATGCGG+AGG | + | chr6.2:86658515-86658534 | MS.gene69022:CDS | 60.0% | |
GGGTCAAGGAGTTGGAGGCA+CGG | + | chr6.2:86656575-86656594 | MS.gene69022:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 86655991 | 86659321 | 86655991 | ID=MS.gene69022 |
chr6.2 | mRNA | 86655991 | 86659321 | 86655991 | ID=MS.gene69022.t1;Parent=MS.gene69022 |
chr6.2 | exon | 86655991 | 86656873 | 86655991 | ID=MS.gene69022.t1.exon1;Parent=MS.gene69022.t1 |
chr6.2 | CDS | 86655991 | 86656873 | 86655991 | ID=cds.MS.gene69022.t1;Parent=MS.gene69022.t1 |
chr6.2 | exon | 86657308 | 86658721 | 86657308 | ID=MS.gene69022.t1.exon2;Parent=MS.gene69022.t1 |
chr6.2 | CDS | 86657308 | 86658721 | 86657308 | ID=cds.MS.gene69022.t1;Parent=MS.gene69022.t1 |
chr6.2 | exon | 86659306 | 86659321 | 86659306 | ID=MS.gene69022.t1.exon3;Parent=MS.gene69022.t1 |
chr6.2 | CDS | 86659306 | 86659321 | 86659306 | ID=cds.MS.gene69022.t1;Parent=MS.gene69022.t1 |
Gene Sequence |
Protein sequence |