AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene69032

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69032.t1 MTR_6g087070 99.217 383 3 0 1 383 39 421 0.0 795
MS.gene69032.t1 MTR_8g102930 79.319 382 76 3 1 381 39 418 0.0 628
MS.gene69032.t1 MTR_4g126010 73.220 295 78 1 1 295 39 332 6.04e-163 466
MS.gene69032.t1 MTR_3g110180 64.130 368 122 4 1 360 39 404 4.19e-162 463
MS.gene69032.t1 MTR_2g099670 80.077 261 52 0 1 261 39 299 3.75e-161 462
MS.gene69032.t1 MTR_3g110180 64.130 368 121 5 1 360 39 403 1.64e-160 459
MS.gene69032.t1 MTR_1g042280 75.532 282 66 2 1 279 40 321 2.67e-160 460
MS.gene69032.t1 MTR_1g042280 75.801 281 65 2 2 279 9 289 2.76e-160 454
MS.gene69032.t1 MTR_8g018310 78.927 261 54 1 1 261 39 298 1.78e-157 453
MS.gene69032.t1 MTR_1g069720 76.296 270 64 0 1 270 39 308 1.20e-156 451
MS.gene69032.t1 MTR_8g018310 74.126 286 65 2 1 278 39 323 1.57e-156 448
MS.gene69032.t1 MTR_1g004990 72.917 288 77 1 2 289 40 326 2.19e-155 446
MS.gene69032.t1 MTR_1g075870 72.792 283 74 2 1 280 40 322 2.67e-155 442
MS.gene69032.t1 MTR_1g075870 72.792 283 74 2 1 280 40 322 1.62e-154 446
MS.gene69032.t1 MTR_7g097160 77.220 259 59 0 1 259 39 297 2.90e-153 442
MS.gene69032.t1 MTR_2g039930 74.330 261 67 0 1 261 39 299 7.77e-150 434
MS.gene69032.t1 MTR_2g099670 80.252 238 47 0 24 261 10 247 1.40e-146 424
MS.gene69032.t1 MTR_1g075870 73.106 264 68 2 20 280 2 265 3.41e-145 415
MS.gene69032.t1 MTR_0492s0030 68.000 275 85 2 1 272 39 313 2.01e-135 393
MS.gene69032.t1 MTR_0543s0020 68.000 275 85 2 1 272 39 313 2.01e-135 393
MS.gene69032.t1 MTR_2g039930 76.606 218 51 0 44 261 1 218 9.86e-129 377
MS.gene69032.t1 MTR_7g097160 80.392 153 30 0 107 259 26 178 8.44e-89 273
MS.gene69032.t1 MTR_7g006030 38.961 231 135 3 13 240 90 317 2.04e-51 182
MS.gene69032.t1 MTR_1g116210 38.961 231 135 3 13 240 167 394 4.63e-50 180
MS.gene69032.t1 MTR_7g085540 38.696 230 135 3 13 239 199 425 1.83e-48 176
MS.gene69032.t1 MTR_1g007150 38.496 226 133 3 13 235 171 393 8.98e-48 174
MS.gene69032.t1 MTR_3g110240 38.053 226 134 3 13 235 168 390 2.15e-46 170
MS.gene69032.t1 MTR_8g014050 36.444 225 137 3 14 235 183 404 1.38e-42 159
MS.gene69032.t1 MTR_7g116400 46.429 84 42 2 44 124 3 86 7.43e-16 73.2
MS.gene69032.t1 MTR_4g132860 29.412 170 103 4 62 231 178 330 3.71e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69032.t1 AT4G28880 69.870 385 98 6 1 378 39 412 0.0 548
MS.gene69032.t1 AT4G28880 69.870 385 98 6 1 378 39 412 0.0 548
MS.gene69032.t1 AT4G28880 69.870 385 98 6 1 378 39 412 0.0 548
MS.gene69032.t1 AT4G28880 69.870 385 98 6 1 378 39 412 0.0 548
MS.gene69032.t1 AT4G28860 70.052 384 98 7 1 378 39 411 0.0 538
MS.gene69032.t1 AT4G28860 78.154 325 64 3 1 320 39 361 0.0 534
MS.gene69032.t1 AT4G26100 70.470 298 87 1 1 298 39 335 1.80e-158 455
MS.gene69032.t1 AT5G57015 72.340 282 78 0 1 282 39 320 6.74e-157 451
MS.gene69032.t1 AT1G72710 69.381 307 91 3 1 307 39 342 1.74e-155 448
MS.gene69032.t1 AT4G28540 75.465 269 65 1 1 268 43 311 2.82e-155 448
MS.gene69032.t1 AT2G19470 68.000 300 86 2 1 291 39 337 1.52e-154 444
MS.gene69032.t1 AT1G03930 71.942 278 73 1 1 273 39 316 1.43e-153 443
MS.gene69032.t1 AT5G44100 76.834 259 60 0 1 259 39 297 2.61e-153 443
MS.gene69032.t1 AT5G44100 76.834 259 60 0 1 259 39 297 2.61e-153 443
MS.gene69032.t1 AT3G23340 76.154 260 62 0 1 260 25 284 2.15e-152 439
MS.gene69032.t1 AT3G23340 76.154 260 62 0 1 260 39 298 6.09e-152 438
MS.gene69032.t1 AT5G43320 75.290 259 64 0 1 259 39 297 7.62e-149 432
MS.gene69032.t1 AT5G43320 75.290 259 64 0 1 259 39 297 3.60e-147 423
MS.gene69032.t1 AT5G43320 75.290 259 64 0 1 259 39 297 3.60e-147 423
MS.gene69032.t1 AT4G14340 74.131 259 67 0 1 259 45 303 8.77e-147 426
MS.gene69032.t1 AT4G14340 74.131 259 67 0 1 259 45 303 2.93e-146 421
MS.gene69032.t1 AT1G04440 66.555 299 90 2 1 289 39 337 3.63e-146 424
MS.gene69032.t1 AT4G08800 62.500 256 64 2 1 256 39 262 1.64e-116 342
MS.gene69032.t1 AT2G25760 40.265 226 132 2 13 235 161 386 2.04e-51 184
MS.gene69032.t1 AT3G03940 40.000 230 132 3 13 239 192 418 1.11e-49 179
MS.gene69032.t1 AT5G18190 39.565 230 133 3 13 239 182 408 3.13e-49 178
MS.gene69032.t1 AT5G18190 39.565 230 133 3 13 239 182 408 3.13e-49 178
MS.gene69032.t1 AT2G25760 39.823 226 130 3 13 235 161 383 3.32e-49 177
MS.gene69032.t1 AT3G13670 37.662 231 138 3 13 240 190 417 4.31e-49 177

Find 112 sgRNAs with CRISPR-Local

Find 277 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGGTATATGTAATTGATTT+TGG 0.199306 6.2:-86467453 MS.gene69032:CDS
ATTCTTGAGGCGCCTATTTC+GGG 0.201735 6.2:-86466604 MS.gene69032:CDS
AAACATGGAGCTGCATATTA+TGG 0.224614 6.2:-86465177 MS.gene69032:CDS
TGCTCCCTTGCCCATGTCTA+TGG 0.233929 6.2:+86465410 None:intergenic
GATTCTTGAGGCGCCTATTT+CGG 0.235818 6.2:-86466605 MS.gene69032:CDS
TTTGATCAGCGACCTGATTA+TGG 0.244829 6.2:-86466627 MS.gene69032:CDS
GAGCAAATAACTCCCGAAAT+AGG 0.299908 6.2:+86466592 None:intergenic
GCTTCTTTGTCGCAGCCTTT+AGG 0.310608 6.2:+86466842 None:intergenic
AGAATGCACATACTCTATTC+TGG 0.314521 6.2:+86467667 None:intergenic
ACAAAGCCGCCGGGATGATT+TGG 0.324631 6.2:-86467033 MS.gene69032:CDS
TCAGACAATGCCACTTCTTC+TGG 0.327429 6.2:-86465755 MS.gene69032:CDS
AATTTGATTATGTATTTGAT+TGG 0.332820 6.2:-86466084 MS.gene69032:CDS
TTGGGCTTGCAAAACGATAT+CGG 0.336257 6.2:-86467434 MS.gene69032:CDS
TCAAAAGAGTGTGAAGTAGA+AGG 0.355419 6.2:+86465484 None:intergenic
GCCCGATTGTTGCTCGCAAC+AGG 0.362131 6.2:+86465923 None:intergenic
GTGCTTGTTATGGATTTGTT+GGG 0.373490 6.2:-86467947 MS.gene69032:CDS
GGAAGACAATGTGCTTGTTA+TGG 0.374985 6.2:-86467957 MS.gene69032:CDS
AAGTTTCAGTTTAAATCATC+AGG 0.379006 6.2:-86465728 MS.gene69032:CDS
CCGGGATGATTTGGAGTCAC+TGG 0.379064 6.2:-86467024 MS.gene69032:CDS
GCAAGCTGCAATACTCATCT+TGG 0.385425 6.2:-86467154 MS.gene69032:CDS
GTGCAGATGCTTACCTCAAT+AGG 0.408274 6.2:+86466781 None:intergenic
TTCCTGTTGCGAGCAACAAT+CGG 0.410181 6.2:-86465925 MS.gene69032:CDS
AACATGGAGCTGCATATTAT+GGG 0.410482 6.2:-86465176 MS.gene69032:CDS
TGTGCTTGTTATGGATTTGT+TGG 0.413619 6.2:-86467948 MS.gene69032:CDS
TTGTTGCTCGCAACAGGAAC+CGG 0.413904 6.2:+86465929 None:intergenic
CGCCTCAAGAATCCATAATC+AGG 0.420387 6.2:+86466615 None:intergenic
TAGAAAGTTCAAAACCTGTA+TGG 0.426001 6.2:+86467387 None:intergenic
GGGCAAGGGAGCAGTAAAAT+TGG 0.426700 6.2:-86465400 MS.gene69032:CDS
TGGGCTTGCAAAACGATATC+GGG 0.435539 6.2:-86467433 MS.gene69032:CDS
TGGGATGTGGCGATTGGTTG+TGG 0.437079 6.2:+86467407 None:intergenic
CACCACTCCATCTTATGCTT+GGG 0.449410 6.2:+86467987 None:intergenic
TCCATGTTTGTATGCATGTC+GGG 0.453939 6.2:+86465191 None:intergenic
TTGAAGAATATTATAGAGCT+TGG 0.455654 6.2:+86468557 None:intergenic
TCTGTTGTGTTGCAGGAGAC+TGG 0.456009 6.2:-86468612 MS.gene69032:intron
ATAGAGTATGTGCATTCTAA+AGG 0.458276 6.2:-86467662 MS.gene69032:CDS
CTTGATGTTGGCTGATCAAA+TGG 0.461622 6.2:-86467867 MS.gene69032:intron
GGTTTGCAGCTTCAGTGGAC+GGG 0.465996 6.2:+86465431 None:intergenic
ACATTCATCCGACTACTTGA+AGG 0.474841 6.2:+86465376 None:intergenic
CCTCCATAGGGATATAAAAC+CGG 0.477649 6.2:-86467636 MS.gene69032:CDS
TTGGCTTCTGAGAATCCTCT+TGG 0.479686 6.2:-86465695 MS.gene69032:CDS
ATTCTAAAGGGTTCCTCCAT+AGG 0.479961 6.2:-86467649 MS.gene69032:CDS
TGCAATACTCATCTTGGGAT+TGG 0.480350 6.2:-86467148 MS.gene69032:intron
CAAGCTGCAATACTCATCTT+GGG 0.484146 6.2:-86467153 MS.gene69032:CDS
AAGCTCTATAATATTCTTCA+AGG 0.485336 6.2:-86468555 MS.gene69032:CDS
AGTGGACGGGGAAGGCTTCA+AGG 0.487112 6.2:+86465444 None:intergenic
TATTTGTGTTTAGCCTTCCA+TGG 0.489876 6.2:-86466870 MS.gene69032:intron
TCAAGAAGCACCAACCTTGT+TGG 0.492609 6.2:+86465879 None:intergenic
TAGCACATTTGTAGTCTCCA+TGG 0.492735 6.2:+86465131 None:intergenic
TAAGATGGAGTGGTGTAGAC+GGG 0.495163 6.2:-86467979 MS.gene69032:CDS
ACACCACTCCATCTTATGCT+TGG 0.495604 6.2:+86467986 None:intergenic
TTGTTGGTTATCAATATCCA+TGG 0.497091 6.2:+86465895 None:intergenic
AGGTCAAAGAATGGCAGTAA+TGG 0.499416 6.2:+86466649 None:intergenic
TCCTGTTGCGAGCAACAATC+GGG 0.500753 6.2:-86465924 MS.gene69032:CDS
TGGTTTGCAGCTTCAGTGGA+CGG 0.501913 6.2:+86465430 None:intergenic
CCTTCCATGGCAAAACCTAA+AGG 0.502138 6.2:-86466857 MS.gene69032:CDS
TAGAGTATGTGCATTCTAAA+GGG 0.503360 6.2:-86467661 MS.gene69032:CDS
ACTTGGTCGGAAGGCAAACC+TGG 0.509382 6.2:-86467597 MS.gene69032:intron
AAGTATGAAGCAAACTCTAC+AGG 0.511994 6.2:+86466672 None:intergenic
CCTCAAAACTGTCTTGATGT+TGG 0.516363 6.2:-86467879 MS.gene69032:CDS
GAAAGTATCAACTCCTATTG+AGG 0.519371 6.2:-86466794 MS.gene69032:intron
TTCTAAAGGGTTCCTCCATA+GGG 0.522924 6.2:-86467648 MS.gene69032:CDS
AGAAAGTTCAAAACCTGTAT+GGG 0.527700 6.2:+86467388 None:intergenic
CGGGAGTTATTTGCTCGAGA+AGG 0.530876 6.2:-86466585 MS.gene69032:intron
GTGGTATCCCAAGCATAAGA+TGG 0.531050 6.2:-86467994 MS.gene69032:CDS
CAAAAGAGTGTGAAGTAGAA+GGG 0.533732 6.2:+86465485 None:intergenic
CCAATCGCCACATCCCATAC+AGG 0.535975 6.2:-86467401 MS.gene69032:intron
GCAGCTTCAGTGGACGGGGA+AGG 0.539511 6.2:+86465436 None:intergenic
GATAACTTTCTCATGGGACT+TGG 0.540360 6.2:-86467614 MS.gene69032:CDS
CGGGATGATTTGGAGTCACT+GGG 0.546228 6.2:-86467023 MS.gene69032:CDS
AAACTTAACACCAGAAGAAG+TGG 0.546484 6.2:+86465745 None:intergenic
CTCCATGTTTGTATGCATGT+CGG 0.549790 6.2:+86465190 None:intergenic
AAATACAGACTGCACAGGCT+TGG 0.551160 6.2:-86465017 MS.gene69032:intron
TTCAAAACCTGTATGGGATG+TGG 0.553955 6.2:+86467394 None:intergenic
AGCACATTTGTAGTCTCCAT+GGG 0.555457 6.2:+86465132 None:intergenic
CAACAATCGGGCAATGCCCA+TGG 0.556507 6.2:-86465912 MS.gene69032:CDS
AAACCGGATAACTTTCTCAT+GGG 0.561522 6.2:-86467620 MS.gene69032:CDS
TCTCATGGGACTTGGTCGGA+AGG 0.565028 6.2:-86467606 MS.gene69032:CDS
TCTATGGTTTGCAGCTTCAG+TGG 0.565590 6.2:+86465426 None:intergenic
ATAAGATGGAGTGGTGTAGA+CGG 0.572946 6.2:-86467980 MS.gene69032:CDS
ATAATCAGGTCGCTGATCAA+AGG 0.572957 6.2:+86466629 None:intergenic
AAAACCGGATAACTTTCTCA+TGG 0.575825 6.2:-86467621 MS.gene69032:CDS
CGACTTACATTCTTGCCAAG+AGG 0.576982 6.2:+86465680 None:intergenic
AGTCCCATGAGAAAGTTATC+CGG 0.577140 6.2:+86467617 None:intergenic
TGCTTGTTATGGATTTGTTG+GGG 0.580128 6.2:-86467946 MS.gene69032:CDS
GTTTGCAGCTTCAGTGGACG+GGG 0.581631 6.2:+86465432 None:intergenic
TTGGCTTCATAAAGCAATTG+TGG 0.582787 6.2:+86468576 None:intergenic
GTATAAAATACAGACTGCAC+AGG 0.585229 6.2:-86465022 MS.gene69032:intron
TTTGTTGGGGCCTAGTCTCG+AGG 0.587835 6.2:-86467933 MS.gene69032:CDS
GCTGATCAAAGGTCAAAGAA+TGG 0.590024 6.2:+86466640 None:intergenic
ACTTTCTCATGGGACTTGGT+CGG 0.592057 6.2:-86467610 MS.gene69032:CDS
ATTTGTAGAACAAAGCCGCC+GGG 0.602617 6.2:-86467042 MS.gene69032:intron
CCTGTATGGGATGTGGCGAT+TGG 0.602796 6.2:+86467401 None:intergenic
TGTTGGTTATCAATATCCAT+GGG 0.604040 6.2:+86465896 None:intergenic
AAATTGGTCCTTCAAGTAGT+CGG 0.607497 6.2:-86465384 MS.gene69032:CDS
GCAAACCATAGACATGGGCA+AGG 0.612790 6.2:-86465415 MS.gene69032:CDS
GAGACTACAAATGTGCTACA+AGG 0.614976 6.2:-86465126 MS.gene69032:intron
ATCCCAAGCATAAGATGGAG+TGG 0.620505 6.2:-86467989 MS.gene69032:CDS
GAAGCTGCAAACCATAGACA+TGG 0.621666 6.2:-86465421 MS.gene69032:CDS
TCCCGACATGCATACAAACA+TGG 0.628287 6.2:-86465192 MS.gene69032:CDS
TATTTGTAGAACAAAGCCGC+CGG 0.629620 6.2:-86467043 MS.gene69032:intron
CCAGTGACTCCAAATCATCC+CGG 0.634258 6.2:+86467024 None:intergenic
CTCTATAATATTCTTCAAGG+AGG 0.636528 6.2:-86468552 MS.gene69032:CDS
ACATGGAGCTGCATATTATG+GGG 0.661231 6.2:-86465175 MS.gene69032:CDS
AAGATGGAGTGGTGTAGACG+GGG 0.662328 6.2:-86467978 MS.gene69032:CDS
TTTCAGTTTAAATCATCAGG+CGG 0.666100 6.2:-86465725 MS.gene69032:CDS
GACCTGATTATGGATTCTTG+AGG 0.667363 6.2:-86466617 MS.gene69032:CDS
AAGCTGCAAACCATAGACAT+GGG 0.682595 6.2:-86465420 MS.gene69032:CDS
GCTTGCAAGTGATCTGCCCA+TGG 0.682712 6.2:-86465148 MS.gene69032:CDS
CAAACCATAGACATGGGCAA+GGG 0.684149 6.2:-86465414 MS.gene69032:CDS
GAATGCCATACCTTCCTCTG+AGG 0.704652 6.2:+86466982 None:intergenic
ATGGATATTGATAACCAACA+AGG 0.718739 6.2:-86465893 MS.gene69032:intron
GTGACTCCAAATCATCCCGG+CGG 0.728033 6.2:+86467027 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTCATTAAGTATTAATTT+TGG + chr6.2:86466474-86466493 None:intergenic 10.0%
!!! ATTCATTAAGTATTAATTTT+GGG + chr6.2:86466473-86466492 None:intergenic 10.0%
!!! TATTAACATGTTTTTTATTT+GGG - chr6.2:86465994-86466013 MS.gene69032:intron 10.0%
!!! TTATTATTTTTGTAGATTTT+TGG - chr6.2:86468173-86468192 MS.gene69032:intron 10.0%
!! AATTTGATTATGTATTTGAT+TGG - chr6.2:86467609-86467628 MS.gene69032:CDS 15.0%
!! ATAAAAAAACTGATGTTAAA+TGG - chr6.2:86467442-86467461 MS.gene69032:CDS 15.0%
!! ATAAACAACAGATTAAAATT+TGG + chr6.2:86468157-86468176 None:intergenic 15.0%
!! TAAAAAAACTGATGTTAAAT+GGG - chr6.2:86467443-86467462 MS.gene69032:CDS 15.0%
!!! CCTTAAAAATACAATTTTTA+GGG + chr6.2:86465296-86465315 None:intergenic 15.0%
!!! GATTTTTGTTTAATTAATAC+AGG - chr6.2:86465677-86465696 MS.gene69032:intron 15.0%
!!! GTATTAACATGTTTTTTATT+TGG - chr6.2:86465993-86466012 MS.gene69032:intron 15.0%
!!! TCCTTAAAAATACAATTTTT+AGG + chr6.2:86465297-86465316 None:intergenic 15.0%
!!! TTTTTTTATGAATGAAGTTT+AGG + chr6.2:86467410-86467429 None:intergenic 15.0%
!! ACAACAATGAAAATAATGAA+AGG + chr6.2:86465187-86465206 None:intergenic 20.0%
!! TAAAGTGAATGAATTAACAA+TGG + chr6.2:86466342-86466361 None:intergenic 20.0%
!! TTCATTATTACTAATTGAGA+AGG - chr6.2:86467873-86467892 MS.gene69032:CDS 20.0%
!!! AATAAATATTTTCAGATGCA+TGG + chr6.2:86467730-86467749 None:intergenic 20.0%
!!! AGGTATATGTAATTGATTTT+GGG - chr6.2:86466241-86466260 MS.gene69032:intron 20.0%
!!! ATAAATATTTTCAGATGCAT+GGG + chr6.2:86467729-86467748 None:intergenic 20.0%
!!! ATTAATTTTGGGTATTTCTA+AGG + chr6.2:86466462-86466481 None:intergenic 20.0%
!!! CCCTAAAAATTGTATTTTTA+AGG - chr6.2:86465293-86465312 MS.gene69032:intron 20.0%
!!! TTAATGAATTTTACAACACA+GGG - chr6.2:86466484-86466503 MS.gene69032:intron 20.0%
!!! TTAATTTTGGGTATTTCTAA+GGG + chr6.2:86466461-86466480 None:intergenic 20.0%
!!! TTCATTATTTTCATTGTTGT+GGG - chr6.2:86465187-86465206 MS.gene69032:CDS 20.0%
!!! TTTCATTATTTTCATTGTTG+TGG - chr6.2:86465186-86465205 MS.gene69032:CDS 20.0%
!!! TTTTGTTTAATTAATACAGG+TGG - chr6.2:86465680-86465699 MS.gene69032:intron 20.0%
! AAGCTCTATAATATTCTTCA+AGG - chr6.2:86465138-86465157 MS.gene69032:CDS 25.0%
! AAGTTTCAGTTTAAATCATC+AGG - chr6.2:86467965-86467984 MS.gene69032:CDS 25.0%
! ACATGACAAGATATATAACA+GGG + chr6.2:86465934-86465953 None:intergenic 25.0%
! GTAAGGAAACAATTAAAAAC+CGG + chr6.2:86466133-86466152 None:intergenic 25.0%
! TAAGGAAACAATTAAAAACC+GGG + chr6.2:86466132-86466151 None:intergenic 25.0%
! TCATTTCTCTTGGATTAAAT+AGG - chr6.2:86465385-86465404 MS.gene69032:CDS 25.0%
! TGCTAAATAAATGCTGAATA+TGG - chr6.2:86468355-86468374 MS.gene69032:intron 25.0%
! TGGGATTTAATTGAAAATGT+TGG - chr6.2:86465655-86465674 MS.gene69032:intron 25.0%
! TTATATTGTGCTATGTTTCT+AGG - chr6.2:86468457-86468476 MS.gene69032:intron 25.0%
! TTATGCAGAACAACAAAATA+TGG + chr6.2:86467841-86467860 None:intergenic 25.0%
! TTCAATATTAACATCAAACC+CGG + chr6.2:86466384-86466403 None:intergenic 25.0%
! TTGAAGAATATTATAGAGCT+TGG + chr6.2:86465139-86465158 None:intergenic 25.0%
!! AAGAATATGAATTTTGCGTA+TGG + chr6.2:86467499-86467518 None:intergenic 25.0%
!! CTTAATGAATTTTACAACAC+AGG - chr6.2:86466483-86466502 MS.gene69032:intron 25.0%
!! GCAAAATTCATATTCTTTTG+TGG - chr6.2:86467502-86467521 MS.gene69032:intron 25.0%
!! TTCACAAGTTTGAAACATAA+AGG + chr6.2:86468115-86468134 None:intergenic 25.0%
!! TTGCTATTGTTATTGTTGTT+GGG - chr6.2:86465636-86465655 MS.gene69032:intron 25.0%
!! TTTTATGAATGAAGTTTAGG+TGG + chr6.2:86467407-86467426 None:intergenic 25.0%
!!! CAGGTATATGTAATTGATTT+TGG - chr6.2:86466240-86466259 MS.gene69032:intron 25.0%
!!! GAATTAACAATGGATTACAA+TGG + chr6.2:86466332-86466351 None:intergenic 25.0%
!!! TCCTCTAAAATGTCAAATAT+CGG + chr6.2:86465350-86465369 None:intergenic 25.0%
AATGTTGTCAATTGCAGATT+GGG + chr6.2:86465565-86465584 None:intergenic 30.0%
AGAAAGTTCAAAACCTGTAT+GGG + chr6.2:86466308-86466327 None:intergenic 30.0%
AGAAGGATTAATGCTTATAC+AGG - chr6.2:86467890-86467909 MS.gene69032:CDS 30.0%
ATAGAGTATGTGCATTCTAA+AGG - chr6.2:86466031-86466050 MS.gene69032:CDS 30.0%
ATATTTGTGTGTGTGTAGAT+TGG - chr6.2:86467692-86467711 MS.gene69032:intron 30.0%
ATCGGTCAATTCTAAATGTA+AGG + chr6.2:86466150-86466169 None:intergenic 30.0%
ATTTGTAACCTGTCATAAAC+CGG + chr6.2:86467592-86467611 None:intergenic 30.0%
CACACACACAAATATACTTA+CGG + chr6.2:86467687-86467706 None:intergenic 30.0%
CACATGACAAGATATATAAC+AGG + chr6.2:86465935-86465954 None:intergenic 30.0%
CATGACAAGATATATAACAG+GGG + chr6.2:86465933-86465952 None:intergenic 30.0%
CCAAGAGAAATGAAAAATGT+CGG + chr6.2:86465378-86465397 None:intergenic 30.0%
CTCTATAATATTCTTCAAGG+AGG - chr6.2:86465141-86465160 MS.gene69032:CDS 30.0%
CTGTTATATATCTTGTCATG+TGG - chr6.2:86465933-86465952 MS.gene69032:intron 30.0%
GAAGGATTAATGCTTATACA+GGG - chr6.2:86467891-86467910 MS.gene69032:CDS 30.0%
GCATAAATGACATATACTCT+GGG + chr6.2:86465911-86465930 None:intergenic 30.0%
GGCATTCTTATCTAGTTATT+TGG - chr6.2:86466727-86466746 MS.gene69032:intron 30.0%
GTAAATGCAAAAATTGCTTC+TGG + chr6.2:86466756-86466775 None:intergenic 30.0%
TACGAAAGAAGGAACTAAAA+GGG + chr6.2:86465862-86465881 None:intergenic 30.0%
TAGAAAGTTCAAAACCTGTA+TGG + chr6.2:86466309-86466328 None:intergenic 30.0%
TAGAGTATGTGCATTCTAAA+GGG - chr6.2:86466032-86466051 MS.gene69032:CDS 30.0%
TATTTGTGTGTGTGTAGATT+GGG - chr6.2:86467693-86467712 MS.gene69032:intron 30.0%
TTTCAGTTTAAATCATCAGG+CGG - chr6.2:86467968-86467987 MS.gene69032:CDS 30.0%
! AATATGAATTTTGCGTATGG+AGG + chr6.2:86467496-86467515 None:intergenic 30.0%
! AGAGAAGTGTGCATTTATAA+AGG - chr6.2:86465971-86465990 MS.gene69032:intron 30.0%
! ATATTGATAACCAACAAGGT+TGG - chr6.2:86467804-86467823 MS.gene69032:intron 30.0%
! ATGGATATTGATAACCAACA+AGG - chr6.2:86467800-86467819 MS.gene69032:intron 30.0%
! GCTAAAACTAAAAGTGTGTT+TGG + chr6.2:86465038-86465057 None:intergenic 30.0%
! TCCGATATTTGACATTTTAG+AGG - chr6.2:86465346-86465365 MS.gene69032:intron 30.0%
! TGCAATTTGTTTGATGTGAA+GGG + chr6.2:86466594-86466613 None:intergenic 30.0%
! TGCTGAATATGGTAATTTTC+TGG - chr6.2:86468366-86468385 MS.gene69032:intron 30.0%
! TGTGATTTATGCTTTGAACA+AGG + chr6.2:86467204-86467223 None:intergenic 30.0%
! TGTTGGTTATCAATATCCAT+GGG + chr6.2:86467800-86467819 None:intergenic 30.0%
! TTGTTGGTTATCAATATCCA+TGG + chr6.2:86467801-86467820 None:intergenic 30.0%
!! CTTGCTATTGTTATTGTTGT+TGG - chr6.2:86465635-86465654 MS.gene69032:intron 30.0%
!! TTATTTTGTCATATTGCAGC+CGG - chr6.2:86467745-86467764 MS.gene69032:intron 30.0%
!!! ATTTGTCTGTTGTTTTGTGT+AGG - chr6.2:86466981-86467000 MS.gene69032:intron 30.0%
!!! GGATATTTTAGTTTCTGTCA+AGG - chr6.2:86465314-86465333 MS.gene69032:intron 30.0%
AAAACCGGATAACTTTCTCA+TGG - chr6.2:86466072-86466091 MS.gene69032:CDS 35.0%
AAACATGGAGCTGCATATTA+TGG - chr6.2:86468516-86468535 MS.gene69032:intron 35.0%
AAACCGGATAACTTTCTCAT+GGG - chr6.2:86466073-86466092 MS.gene69032:CDS 35.0%
AAACTTAACACCAGAAGAAG+TGG + chr6.2:86467951-86467970 None:intergenic 35.0%
AAAGAAGGAACTAAAAGGGA+TGG + chr6.2:86465858-86465877 None:intergenic 35.0%
AAAGTGTGTTTGGTATCACA+AGG + chr6.2:86465028-86465047 None:intergenic 35.0%
AAATTGGTCCTTCAAGTAGT+CGG - chr6.2:86468309-86468328 MS.gene69032:intron 35.0%
AACATGGAGCTGCATATTAT+GGG - chr6.2:86468517-86468536 MS.gene69032:intron 35.0%
AAGAAGGAACTAAAAGGGAT+GGG + chr6.2:86465857-86465876 None:intergenic 35.0%
AAGTATGAAGCAAACTCTAC+AGG + chr6.2:86467024-86467043 None:intergenic 35.0%
AATCACAAGCCAACAAATGT+TGG - chr6.2:86467217-86467236 MS.gene69032:intron 35.0%
AATCATTTGCAGTCACCTTA+GGG + chr6.2:86468646-86468665 None:intergenic 35.0%
ACATAGCACAATATAAGCAG+TGG + chr6.2:86468453-86468472 None:intergenic 35.0%
AGAATGCACATACTCTATTC+TGG + chr6.2:86466029-86466048 None:intergenic 35.0%
AGAATGTAAGTCGTCTTACA+TGG - chr6.2:86468023-86468042 MS.gene69032:intron 35.0%
AGGGAGAACAAAAACTTAAC+AGG - chr6.2:86466503-86466522 MS.gene69032:intron 35.0%
AGGTGTTCATGTATTTACTC+AGG - chr6.2:86465405-86465424 MS.gene69032:CDS 35.0%
AGTTCAAGGAATGACAGAAT+CGG + chr6.2:86466168-86466187 None:intergenic 35.0%
ATCAAACCCGGTAAAAAAAG+AGG + chr6.2:86466372-86466391 None:intergenic 35.0%
ATCATCAGGCGGTAAAAATT+TGG - chr6.2:86467979-86467998 MS.gene69032:CDS 35.0%
ATTCCATTCCACAATGATGT+GGG - chr6.2:86467265-86467284 MS.gene69032:intron 35.0%
ATTTCTTAGCTCATCTTTCG+AGG - chr6.2:86468597-86468616 MS.gene69032:CDS 35.0%
ATTTGTGTGTGTGTAGATTG+GGG - chr6.2:86467694-86467713 MS.gene69032:intron 35.0%
CAATGTTGTCAATTGCAGAT+TGG + chr6.2:86465566-86465585 None:intergenic 35.0%
CTACGAAAGAAGGAACTAAA+AGG + chr6.2:86465863-86465882 None:intergenic 35.0%
GCACAACTTGAGATTAAATG+CGG - chr6.2:86465209-86465228 MS.gene69032:CDS 35.0%
GGAAAATGAGCAACATAAAC+TGG + chr6.2:86468623-86468642 None:intergenic 35.0%
GGCATAAATGACATATACTC+TGG + chr6.2:86465912-86465931 None:intergenic 35.0%
GGGAGAACAAAAACTTAACA+GGG - chr6.2:86466504-86466523 MS.gene69032:intron 35.0%
GTATAAAATACAGACTGCAC+AGG - chr6.2:86468671-86468690 MS.gene69032:intron 35.0%
TATTCCATTCCACAATGATG+TGG - chr6.2:86467264-86467283 MS.gene69032:intron 35.0%
TCAAACCCGGTAAAAAAAGA+GGG + chr6.2:86466371-86466390 None:intergenic 35.0%
TCGATGAAACAACTAGTTCA+AGG + chr6.2:86466182-86466201 None:intergenic 35.0%
TCGTCTTACATGGAGTAAAA+AGG - chr6.2:86468033-86468052 MS.gene69032:intron 35.0%
TGACACTAAAAAACACCGTA+AGG + chr6.2:86465886-86465905 None:intergenic 35.0%
TGAGTACTACTGTCTATGTA+TGG - chr6.2:86468410-86468429 MS.gene69032:intron 35.0%
TTGGCTTCATAAAGCAATTG+TGG + chr6.2:86465120-86465139 None:intergenic 35.0%
! CAAAAGAGTGTGAAGTAGAA+GGG + chr6.2:86468211-86468230 None:intergenic 35.0%
! CCGACATTTTTCATTTCTCT+TGG - chr6.2:86465375-86465394 MS.gene69032:CDS 35.0%
! CTGCAATTTGTTTGATGTGA+AGG + chr6.2:86466595-86466614 None:intergenic 35.0%
! TATTTGTGTTTAGCCTTCCA+TGG - chr6.2:86466823-86466842 MS.gene69032:CDS 35.0%
! TCAAAAGAGTGTGAAGTAGA+AGG + chr6.2:86468212-86468231 None:intergenic 35.0%
!! AAATGTTGGTTCAGTTGGTA+TGG - chr6.2:86467231-86467250 MS.gene69032:intron 35.0%
!! CAACATCAAGACAGTTTTGA+GGG + chr6.2:86465816-86465835 None:intergenic 35.0%
!! GAAAGTATCAACTCCTATTG+AGG - chr6.2:86466899-86466918 MS.gene69032:intron 35.0%
!! GAGGATCTTTTTGTTTACTG+TGG - chr6.2:86465779-86465798 MS.gene69032:CDS 35.0%
!! GTGCTTGTTATGGATTTGTT+GGG - chr6.2:86465746-86465765 MS.gene69032:CDS 35.0%
!! TATCCGGTTTTATATCCCTA+TGG + chr6.2:86466063-86466082 None:intergenic 35.0%
!! TGCTTGTTATGGATTTGTTG+GGG - chr6.2:86465747-86465766 MS.gene69032:CDS 35.0%
!! TGTGCTTGTTATGGATTTGT+TGG - chr6.2:86465745-86465764 MS.gene69032:CDS 35.0%
!! TTGTTTTTCTGTTGTGTTGC+AGG - chr6.2:86465074-86465093 MS.gene69032:intron 35.0%
!!! ACTCTTTTGAAGCATCAAGA+AGG - chr6.2:86468222-86468241 MS.gene69032:intron 35.0%
!!! TCTTCACCCTCTTTTTTTAC+CGG - chr6.2:86466362-86466381 MS.gene69032:intron 35.0%
AAGCTGCAAACCATAGACAT+GGG - chr6.2:86468273-86468292 MS.gene69032:intron 40.0%
ACAAAAAGATCCTCGAGACT+AGG + chr6.2:86465773-86465792 None:intergenic 40.0%
ACATGGAGCTGCATATTATG+GGG - chr6.2:86468518-86468537 MS.gene69032:intron 40.0%
ACATTCATCCGACTACTTGA+AGG + chr6.2:86468320-86468339 None:intergenic 40.0%
ACTCATTTCCGGTTTATGAC+AGG - chr6.2:86467581-86467600 MS.gene69032:intron 40.0%
AGAAGGAACTAAAAGGGATG+GGG + chr6.2:86465856-86465875 None:intergenic 40.0%
AGCACATTTGTAGTCTCCAT+GGG + chr6.2:86468564-86468583 None:intergenic 40.0%
AGGTCAAAGAATGGCAGTAA+TGG + chr6.2:86467047-86467066 None:intergenic 40.0%
AGTCCCATGAGAAAGTTATC+CGG + chr6.2:86466079-86466098 None:intergenic 40.0%
ATAAGATGGAGTGGTGTAGA+CGG - chr6.2:86465713-86465732 MS.gene69032:CDS 40.0%
ATAATCAGGTCGCTGATCAA+AGG + chr6.2:86467067-86467086 None:intergenic 40.0%
ATCATTTGCAGTCACCTTAG+GGG + chr6.2:86468645-86468664 None:intergenic 40.0%
CAAGCTGCAATACTCATCTT+GGG - chr6.2:86466540-86466559 MS.gene69032:intron 40.0%
CAATCATTTGCAGTCACCTT+AGG + chr6.2:86468647-86468666 None:intergenic 40.0%
CACTATCAGAGTCCACAAAT+CGG + chr6.2:86467305-86467324 None:intergenic 40.0%
CAGTGGTCAATGATATGAGT+GGG + chr6.2:86468436-86468455 None:intergenic 40.0%
CATTTGAACCCACATCATTG+TGG + chr6.2:86467276-86467295 None:intergenic 40.0%
CCAACTGAACCAACATTTGT+TGG + chr6.2:86467229-86467248 None:intergenic 40.0%
CCTCAAAACTGTCTTGATGT+TGG - chr6.2:86465814-86465833 MS.gene69032:intron 40.0%
CCTCCATAGGGATATAAAAC+CGG - chr6.2:86466057-86466076 MS.gene69032:CDS 40.0%
CTCCATGTTTGTATGCATGT+CGG + chr6.2:86468506-86468525 None:intergenic 40.0%
GACCTGATTATGGATTCTTG+AGG - chr6.2:86467076-86467095 MS.gene69032:intron 40.0%
GAGACTACAAATGTGCTACA+AGG - chr6.2:86468567-86468586 MS.gene69032:CDS 40.0%
GAGCAAATAACTCCCGAAAT+AGG + chr6.2:86467104-86467123 None:intergenic 40.0%
GATAACTTTCTCATGGGACT+TGG - chr6.2:86466079-86466098 MS.gene69032:CDS 40.0%
GATGAGAAGAGAAGAGGTAA+AGG + chr6.2:86466439-86466458 None:intergenic 40.0%
GATTTGTGGACTCTGATAGT+GGG - chr6.2:86467304-86467323 MS.gene69032:intron 40.0%
GCTGATCAAAGGTCAAAGAA+TGG + chr6.2:86467056-86467075 None:intergenic 40.0%
GGTGACTGCAAATGATTGTT+TGG - chr6.2:86468649-86468668 MS.gene69032:intron 40.0%
GTCATAAACCGGAAATGAGT+GGG + chr6.2:86467581-86467600 None:intergenic 40.0%
TAGCACATTTGTAGTCTCCA+TGG + chr6.2:86468565-86468584 None:intergenic 40.0%
TATTTGTAGAACAAAGCCGC+CGG - chr6.2:86466650-86466669 MS.gene69032:CDS 40.0%
TCATAAACCGGAAATGAGTG+GGG + chr6.2:86467580-86467599 None:intergenic 40.0%
TCCATGTTTGTATGCATGTC+GGG + chr6.2:86468505-86468524 None:intergenic 40.0%
TGCAATACTCATCTTGGGAT+TGG - chr6.2:86466545-86466564 MS.gene69032:intron 40.0%
TGTCATAAACCGGAAATGAG+TGG + chr6.2:86467582-86467601 None:intergenic 40.0%
TTCAAAACCTGTATGGGATG+TGG + chr6.2:86466302-86466321 None:intergenic 40.0%
TTGGGCTTGCAAAACGATAT+CGG - chr6.2:86466259-86466278 MS.gene69032:intron 40.0%
TTGTCAAGTATCCGCTATAG+TGG - chr6.2:86465430-86465449 MS.gene69032:CDS 40.0%
TTTAGGGACAATTGAGACGT+TGG + chr6.2:86465280-86465299 None:intergenic 40.0%
TTTGATCAGCGACCTGATTA+TGG - chr6.2:86467066-86467085 MS.gene69032:intron 40.0%
! ATTCTAAAGGGTTCCTCCAT+AGG - chr6.2:86466044-86466063 MS.gene69032:CDS 40.0%
! CCAACATCAAGACAGTTTTG+AGG + chr6.2:86465817-86465836 None:intergenic 40.0%
! CTTGATGTTGGCTGATCAAA+TGG - chr6.2:86465826-86465845 MS.gene69032:intron 40.0%
! GGAAGACAATGTGCTTGTTA+TGG - chr6.2:86465736-86465755 MS.gene69032:CDS 40.0%
! TTCCTTCTTTCGTAGCCTTA+CGG - chr6.2:86465868-86465887 MS.gene69032:intron 40.0%
! TTCTAAAGGGTTCCTCCATA+GGG - chr6.2:86466045-86466064 MS.gene69032:CDS 40.0%
! TTTTGTACTTCCTCAGAGGA+AGG - chr6.2:86466701-86466720 MS.gene69032:intron 40.0%
!! CCAACAAATGTTGGTTCAGT+TGG - chr6.2:86467226-86467245 MS.gene69032:intron 40.0%
!!! CTTCACCCTCTTTTTTTACC+GGG - chr6.2:86466363-86466382 MS.gene69032:intron 40.0%
AAACCTGGTGAGTGAATACC+CGG - chr6.2:86466111-86466130 MS.gene69032:intron 45.0%
AAATACAGACTGCACAGGCT+TGG - chr6.2:86468676-86468695 MS.gene69032:intron 45.0%
AAATGCACACTTCTCTCGCT+TGG + chr6.2:86465967-86465986 None:intergenic 45.0%
ACACCACTCCATCTTATGCT+TGG + chr6.2:86465710-86465729 None:intergenic 45.0%
ATAACCCATATTGAGCCTGC+GGG - chr6.2:86467374-86467393 MS.gene69032:intron 45.0%
ATCCCAAGCATAAGATGGAG+TGG - chr6.2:86465704-86465723 MS.gene69032:CDS 45.0%
ATTTGTAGAACAAAGCCGCC+GGG - chr6.2:86466651-86466670 MS.gene69032:CDS 45.0%
CAAACCATAGACATGGGCAA+GGG - chr6.2:86468279-86468298 MS.gene69032:intron 45.0%
CACCACTCCATCTTATGCTT+GGG + chr6.2:86465709-86465728 None:intergenic 45.0%
CATAACCCATATTGAGCCTG+CGG - chr6.2:86467373-86467392 MS.gene69032:intron 45.0%
CCTTCCATGGCAAAACCTAA+AGG - chr6.2:86466836-86466855 MS.gene69032:CDS 45.0%
CGACTTACATTCTTGCCAAG+AGG + chr6.2:86468016-86468035 None:intergenic 45.0%
CGATTTGTGGACTCTGATAG+TGG - chr6.2:86467303-86467322 MS.gene69032:intron 45.0%
CGCCTCAAGAATCCATAATC+AGG + chr6.2:86467081-86467100 None:intergenic 45.0%
CTAAGGGATGAGAAGAGAAG+AGG + chr6.2:86466445-86466464 None:intergenic 45.0%
GAACCCACATCATTGTGGAA+TGG + chr6.2:86467271-86467290 None:intergenic 45.0%
GAAGCTGCAAACCATAGACA+TGG - chr6.2:86468272-86468291 MS.gene69032:intron 45.0%
GAAGGAACTAAAAGGGATGG+GGG + chr6.2:86465855-86465874 None:intergenic 45.0%
GCAAGCTGCAATACTCATCT+TGG - chr6.2:86466539-86466558 MS.gene69032:intron 45.0%
GCAGTGGTCAATGATATGAG+TGG + chr6.2:86468437-86468456 None:intergenic 45.0%
GCTGCACAGATTCAGTAGAA+AGG + chr6.2:86468066-86468085 None:intergenic 45.0%
GTAACATCCCCACTCATTTC+CGG - chr6.2:86467570-86467589 MS.gene69032:intron 45.0%
GTGCAGATGCTTACCTCAAT+AGG + chr6.2:86466915-86466934 None:intergenic 45.0%
GTGGTATCCCAAGCATAAGA+TGG - chr6.2:86465699-86465718 MS.gene69032:CDS 45.0%
TAAGATGGAGTGGTGTAGAC+GGG - chr6.2:86465714-86465733 MS.gene69032:CDS 45.0%
TACTTCCTCAGAGGAAGGTA+TGG - chr6.2:86466706-86466725 MS.gene69032:intron 45.0%
TCATTTGCAGTCACCTTAGG+GGG + chr6.2:86468644-86468663 None:intergenic 45.0%
TCCCGACATGCATACAAACA+TGG - chr6.2:86468501-86468520 MS.gene69032:intron 45.0%
TGGGCTTGCAAAACGATATC+GGG - chr6.2:86466260-86466279 MS.gene69032:intron 45.0%
TTCCTGTTGCGAGCAACAAT+CGG - chr6.2:86467768-86467787 MS.gene69032:intron 45.0%
! ACTTTCTCATGGGACTTGGT+CGG - chr6.2:86466083-86466102 MS.gene69032:CDS 45.0%
! ATGGGTTATGGAAAGCCTCA+AGG + chr6.2:86467363-86467382 None:intergenic 45.0%
! ATTCTTGAGGCGCCTATTTC+GGG - chr6.2:86467089-86467108 MS.gene69032:intron 45.0%
! CTCTACTCTTTTGTGACTGC+TGG + chr6.2:86467649-86467668 None:intergenic 45.0%
! GATTCTTGAGGCGCCTATTT+CGG - chr6.2:86467088-86467107 MS.gene69032:intron 45.0%
! GTGCTTTTGTACTTCCTCAG+AGG - chr6.2:86466697-86466716 MS.gene69032:intron 45.0%
! TCAGACAATGCCACTTCTTC+TGG - chr6.2:86467938-86467957 MS.gene69032:CDS 45.0%
! TCTATGGTTTGCAGCTTCAG+TGG + chr6.2:86468270-86468289 None:intergenic 45.0%
! TGTTGCTCATTTTCCCCCTA+AGG - chr6.2:86468628-86468647 MS.gene69032:intron 45.0%
! TTGGCTTCTGAGAATCCTCT+TGG - chr6.2:86467998-86468017 MS.gene69032:intron 45.0%
!! CCGGTTTTATATCCCTATGG+AGG + chr6.2:86466060-86466079 None:intergenic 45.0%
!! CCTTTAGGTTTTGCCATGGA+AGG + chr6.2:86466839-86466858 None:intergenic 45.0%
!! TATAGTGGTGCTATAGCGCT+GGG - chr6.2:86465445-86465464 MS.gene69032:CDS 45.0%
!! TCAAGAAGCACCAACCTTGT+TGG + chr6.2:86467817-86467836 None:intergenic 45.0%
AAACCGGGTATTCACTCACC+AGG + chr6.2:86466117-86466136 None:intergenic 50.0%
AAGATGGAGTGGTGTAGACG+GGG - chr6.2:86465715-86465734 MS.gene69032:CDS 50.0%
AGGCTCACTAAGCGCTATAG+AGG + chr6.2:86467343-86467362 None:intergenic 50.0%
AGGGACAATTGAGACGTTGG+AGG + chr6.2:86465277-86465296 None:intergenic 50.0%
ATAGCGCTTAGTGAGCCTTG+AGG - chr6.2:86467345-86467364 MS.gene69032:intron 50.0%
CACCGTAAGGCTACGAAAGA+AGG + chr6.2:86465873-86465892 None:intergenic 50.0%
CCAGTGACTCCAAATCATCC+CGG + chr6.2:86466672-86466691 None:intergenic 50.0%
CGGGAGTTATTTGCTCGAGA+AGG - chr6.2:86467108-86467127 MS.gene69032:intron 50.0%
GAATGCCATACCTTCCTCTG+AGG + chr6.2:86466714-86466733 None:intergenic 50.0%
GCAAACCATAGACATGGGCA+AGG - chr6.2:86468278-86468297 MS.gene69032:intron 50.0%
GCGCTATAGCACCACTATAG+CGG + chr6.2:86465444-86465463 None:intergenic 50.0%
GCTTCTTTGTCGCAGCCTTT+AGG + chr6.2:86466854-86466873 None:intergenic 50.0%
GGGCAAGGGAGCAGTAAAAT+TGG - chr6.2:86468293-86468312 MS.gene69032:intron 50.0%
GTGCTTGTGTTGCACATGTC+AGG - chr6.2:86466221-86466240 MS.gene69032:intron 50.0%
TCCTGTTGCGAGCAACAATC+GGG - chr6.2:86467769-86467788 MS.gene69032:intron 50.0%
TCTGTTGTGTTGCAGGAGAC+TGG - chr6.2:86465081-86465100 MS.gene69032:intron 50.0%
TGATGTGGGTTCAAATGCCG+TGG - chr6.2:86467279-86467298 MS.gene69032:intron 50.0%
TTGTTGCTCGCAACAGGAAC+CGG + chr6.2:86467767-86467786 None:intergenic 50.0%
! CGCAGGCTCAATATGGGTTA+TGG + chr6.2:86467375-86467394 None:intergenic 50.0%
! CGGGATGATTTGGAGTCACT+GGG - chr6.2:86466670-86466689 MS.gene69032:CDS 50.0%
! TGGTTTGCAGCTTCAGTGGA+CGG + chr6.2:86468266-86468285 None:intergenic 50.0%
!! ATAGTGGTGCTATAGCGCTG+GGG - chr6.2:86465446-86465465 MS.gene69032:CDS 50.0%
!! CTATAGTGGTGCTATAGCGC+TGG - chr6.2:86465444-86465463 MS.gene69032:CDS 50.0%
!! GCAGCCTTTAGGTTTTGCCA+TGG + chr6.2:86466843-86466862 None:intergenic 50.0%
ACAAAGCCGCCGGGATGATT+TGG - chr6.2:86466660-86466679 MS.gene69032:CDS 55.0%
ACTTGGTCGGAAGGCAAACC+TGG - chr6.2:86466096-86466115 MS.gene69032:intron 55.0%
CAACAATCGGGCAATGCCCA+TGG - chr6.2:86467781-86467800 MS.gene69032:intron 55.0%
CAGAGTCCACAAATCGGCCA+CGG + chr6.2:86467299-86467318 None:intergenic 55.0%
CCAATCGCCACATCCCATAC+AGG - chr6.2:86466292-86466311 MS.gene69032:intron 55.0%
CCTGTATGGGATGTGGCGAT+TGG + chr6.2:86466295-86466314 None:intergenic 55.0%
GAGTCCCGCAGGCTCAATAT+GGG + chr6.2:86467381-86467400 None:intergenic 55.0%
GCTTGCAAGTGATCTGCCCA+TGG - chr6.2:86468545-86468564 MS.gene69032:intron 55.0%
GGTTTGCAGCTTCAGTGGAC+GGG + chr6.2:86468265-86468284 None:intergenic 55.0%
GTGACTCCAAATCATCCCGG+CGG + chr6.2:86466669-86466688 None:intergenic 55.0%
GTTTGCAGCTTCAGTGGACG+GGG + chr6.2:86468264-86468283 None:intergenic 55.0%
TGAGTCCCGCAGGCTCAATA+TGG + chr6.2:86467382-86467401 None:intergenic 55.0%
TGCTCCCTTGCCCATGTCTA+TGG + chr6.2:86468286-86468305 None:intergenic 55.0%
TTTGTTGGGGCCTAGTCTCG+AGG - chr6.2:86465760-86465779 MS.gene69032:CDS 55.0%
! CCGGGATGATTTGGAGTCAC+TGG - chr6.2:86466669-86466688 MS.gene69032:CDS 55.0%
! TCTCATGGGACTTGGTCGGA+AGG - chr6.2:86466087-86466106 MS.gene69032:CDS 55.0%
! TGGGATGTGGCGATTGGTTG+TGG + chr6.2:86466289-86466308 None:intergenic 55.0%
!! CAAATGCCGTGGCCGATTTG+TGG - chr6.2:86467290-86467309 MS.gene69032:intron 55.0%
!! TTAGGTGGATTGAGTCCCGC+AGG + chr6.2:86467392-86467411 None:intergenic 55.0%
AGTGGACGGGGAAGGCTTCA+AGG + chr6.2:86468252-86468271 None:intergenic 60.0%
GCCCGATTGTTGCTCGCAAC+AGG + chr6.2:86467773-86467792 None:intergenic 60.0%
GCAGCTTCAGTGGACGGGGA+AGG + chr6.2:86468260-86468279 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 86464999 86468716 86464999 ID=MS.gene69032
chr6.2 mRNA 86464999 86468716 86464999 ID=MS.gene69032.t1;Parent=MS.gene69032
chr6.2 exon 86468714 86468716 86468714 ID=MS.gene69032.t1.exon1;Parent=MS.gene69032.t1
chr6.2 CDS 86468714 86468716 86468714 ID=cds.MS.gene69032.t1;Parent=MS.gene69032.t1
chr6.2 exon 86468550 86468619 86468550 ID=MS.gene69032.t1.exon2;Parent=MS.gene69032.t1
chr6.2 CDS 86468550 86468619 86468550 ID=cds.MS.gene69032.t1;Parent=MS.gene69032.t1
chr6.2 exon 86467868 86468016 86467868 ID=MS.gene69032.t1.exon3;Parent=MS.gene69032.t1
chr6.2 CDS 86467868 86468016 86467868 ID=cds.MS.gene69032.t1;Parent=MS.gene69032.t1
chr6.2 exon 86467598 86467693 86467598 ID=MS.gene69032.t1.exon4;Parent=MS.gene69032.t1
chr6.2 CDS 86467598 86467693 86467598 ID=cds.MS.gene69032.t1;Parent=MS.gene69032.t1
chr6.2 exon 86467402 86467472 86467402 ID=MS.gene69032.t1.exon5;Parent=MS.gene69032.t1
chr6.2 CDS 86467402 86467472 86467402 ID=cds.MS.gene69032.t1;Parent=MS.gene69032.t1
chr6.2 exon 86467149 86467210 86467149 ID=MS.gene69032.t1.exon6;Parent=MS.gene69032.t1
chr6.2 CDS 86467149 86467210 86467149 ID=cds.MS.gene69032.t1;Parent=MS.gene69032.t1
chr6.2 exon 86466993 86467056 86466993 ID=MS.gene69032.t1.exon7;Parent=MS.gene69032.t1
chr6.2 CDS 86466993 86467056 86466993 ID=cds.MS.gene69032.t1;Parent=MS.gene69032.t1
chr6.2 exon 86466795 86466879 86466795 ID=MS.gene69032.t1.exon8;Parent=MS.gene69032.t1
chr6.2 CDS 86466795 86466879 86466795 ID=cds.MS.gene69032.t1;Parent=MS.gene69032.t1
chr6.2 exon 86466586 86466712 86466586 ID=MS.gene69032.t1.exon9;Parent=MS.gene69032.t1
chr6.2 CDS 86466586 86466712 86466586 ID=cds.MS.gene69032.t1;Parent=MS.gene69032.t1
chr6.2 exon 86466030 86466112 86466030 ID=MS.gene69032.t1.exon10;Parent=MS.gene69032.t1
chr6.2 CDS 86466030 86466112 86466030 ID=cds.MS.gene69032.t1;Parent=MS.gene69032.t1
chr6.2 exon 86465894 86465951 86465894 ID=MS.gene69032.t1.exon11;Parent=MS.gene69032.t1
chr6.2 CDS 86465894 86465951 86465894 ID=cds.MS.gene69032.t1;Parent=MS.gene69032.t1
chr6.2 exon 86465688 86465803 86465688 ID=MS.gene69032.t1.exon12;Parent=MS.gene69032.t1
chr6.2 CDS 86465688 86465803 86465688 ID=cds.MS.gene69032.t1;Parent=MS.gene69032.t1
chr6.2 exon 86465365 86465527 86465365 ID=MS.gene69032.t1.exon13;Parent=MS.gene69032.t1
chr6.2 CDS 86465365 86465527 86465365 ID=cds.MS.gene69032.t1;Parent=MS.gene69032.t1
chr6.2 exon 86465127 86465236 86465127 ID=MS.gene69032.t1.exon14;Parent=MS.gene69032.t1
chr6.2 CDS 86465127 86465236 86465127 ID=cds.MS.gene69032.t1;Parent=MS.gene69032.t1
chr6.2 exon 86464999 86465031 86464999 ID=MS.gene69032.t1.exon15;Parent=MS.gene69032.t1
chr6.2 CDS 86464999 86465031 86464999 ID=cds.MS.gene69032.t1;Parent=MS.gene69032.t1
Gene Sequence

>MS.gene69032

ATGGTTTATCGTGATTTTGGCATACTCCTTGTGATACCAAACACACTTTTAGTTTTAGCTTAGTTTTTAATTTTGTTGTTTTTCTGTTGTGTTGCAGGAGACTGGTAAAACGAAGCATCCACAATTGCTTTATGAAGCCAAGCTCTATAATATTCTTCAAGGAGGAAGTATGCTTCTTTCTTTTTCCTTTCATTATTTTCATTGTTGTGGGCACAACTTGAGATTAAATGCGGAGCTTATTTGATTGTTGAGAAATGAAATGTGTCAGTTTCGATCCTCCAACGTCTCAATTGTCCCTAAAAATTGTATTTTTAAGGATATTTTAGTTTCTGTCAAGGACAATTTTGTCCGATATTTGACATTTTAGAGGACTGAGCCGACATTTTTCATTTCTCTTGGATTAAATAGGTGTTCATGTATTTACTCAGGTGTTGTCAAGTATCCGCTATAGTGGTGCTATAGCGCTGGGGTGTAGTAACAAATTGCTATTGTTCTACAATACAATGTTTAGTACAAAATGTTTGTCAAATAGCAATTTGAAAAGAAAAAATAAAACACTTTTTCCCAATCTGCAATTGACAACATTGATTTACTCTAATAACAATAACACATTTAAGCAGTAAGTATATTTGCGTTCTTGCTATTGTTATTGTTGTTGGGATTTAATTGAAAATGTTGGATTTTTGTTTAATTAATACAGGTGGTATCCCAAGCATAAGATGGAGTGGTGTAGACGGGGAAGACAATGTGCTTGTTATGGATTTGTTGGGGCCTAGTCTCGAGGATCTTTTTGTTTACTGTGGAAGAAAATTCTCCCTCAAAACTGTCTTGATGTTGGCTGATCAAATGGTAACCCCCATCCCTTTTAGTTCCTTCTTTCGTAGCCTTACGGTGTTTTTTAGTGTCAGTCCCAGAGTATATGTCATTTATGCCCCTGTTATATATCTTGTCATGTGGTTATGATGCCAAGCGAGAGAAGTGTGCATTTATAAAGGTATTAACATGTTTTTTATTTGGGTGCAGATGACCAGAATAGAGTATGTGCATTCTAAAGGGTTCCTCCATAGGGATATAAAACCGGATAACTTTCTCATGGGACTTGGTCGGAAGGCAAACCTGGTGAGTGAATACCCGGTTTTTAATTGTTTCCTTACATTTAGAATTGACCGATTCTGTCATTCCTTGAACTAGTTGTTTCATCGAATTGATGTGCTGTATACGTGTGCTTGTGTTGCACATGTCAGGTATATGTAATTGATTTTGGGCTTGCAAAACGATATCGGGACTCCACAACCAATCGCCACATCCCATACAGGTTTTGAACTTTCTACCATTGTAATCCATTGTTAATTCATTCACTTTATCTTCACCCTCTTTTTTTACCGGGTTTGATGTTAATATTGAAAATTTCTTCTGATTTTGTGTGTAGATTTCTTTCCTTTACCTCTTCTCTTCTCATCCCTTAGAAATACCCAAAATTAATACTTAATGAATTTTACAACACAGGGAGAACAAAAACTTAACAGGGACTGCGCGTTATGCAAGCTGCAATACTCATCTTGGGATTGGTAAGTCAGAAGAAATTATTTAAGCCCTTCACATCAAACAAATTGCAGTTATTTTCTTTATGTTAATTCTCTATTTTATTTTTTATTTGTAGAACAAAGCCGCCGGGATGATTTGGAGTCACTGGGATATGTGCTTTTGTACTTCCTCAGAGGAAGGTATGGCATTCTTATCTAGTTATTTGGCTTCCAGAAGCAATTTTTGCATTTACTTATTGAGAGCAACATAAATATATGTTCTGATCTTTACGCTACTTAATATTTGTGTTTAGCCTTCCATGGCAAAACCTAAAGGCTGCGACAAAGAAGCAAAAGTATGATAAAATATGTGAAAAGAAAGTATCAACTCCTATTGAGGTAAGCATCTGCACATATATCTATTCTGAATGCATTTTTTTTTGTTATCATCACAATCTTATTTGTCTGTTGTTTTGTGTAGGTTTTATGCAAATCTCATCCTGTAGAGTTTGCTTCATACTTCCATTACTGCCATTCTTTGACCTTTGATCAGCGACCTGATTATGGATTCTTGAGGCGCCTATTTCGGGAGTTATTTGCTCGAGAAGGTGATTATAAATGTTCATCAAGTCATCTTTATAATCTTAACATTTACATGTTTAGTGTTGTGCAACAATAGCCTTGTTCAAAGCATAAATCACAAGCCAACAAATGTTGGTTCAGTTGGTATGGATTCAACTTCTATTCCATTCCACAATGATGTGGGTTCAAATGCCGTGGCCGATTTGTGGACTCTGATAGTGGGTATTATGTAAGTGCCTCTATAGCGCTTAGTGAGCCTTGAGGCTTTCCATAACCCATATTGAGCCTGCGGGACTCAATCCACCTAAACTTCATTCATAAAAAAAAAATAAAAAATCATAAAAAAACTGATGTTAAATGGGCAGTTTGTTTTGATCAACTTACGTGTTCCTCCATACGCAAAATTCATATTCTTTTGTGGTAAAGTTAGCTGAATTTGTCTTTGTTTTCACATCTACGCTGAAATGTAACATCCCCACTCATTTCCGGTTTATGACAGGTTACAAATTTGATTATGTATTTGATTGGACAATTTTGAAGTACCAGCAGTCACAAAAGAGTAGAGCTCAGACTCACATATCCGTAAGTATATTTGTGTGTGTGTAGATTGGGGTTGAGTCTTCCCATGCATCTGAAAATATTTATTTTGTCATATTGCAGCCGGTTCCTGTTGCGAGCAACAATCGGGCAATGCCCATGGATATTGATAACCAACAAGGTTGGTGCTTCTTGAACCATATTTTGTTGTTCTGCATAATAAAATGTCTTGTTCATTATTACTAATTGAGAAGGATTAATGCTTATACAGGGAATGTCTCAGCAGAGCAAATTAGATCAGACAATGCCACTTCTTCTGGTGTTAAGTTTCAGTTTAAATCATCAGGCGGTAAAAATTTGGCTTCTGAGAATCCTCTTGGCAAGAATGTAAGTCGTCTTACATGGAGTAAAAAGGTTTCATTCCTTTCTACTGAATCTGTGCAGCACTGAGTCACAATTCTTAGTTGCGCACCTTTATGTTTCAAACTTGTGAAATAGACGAGTGTTTAATGACCAAATTTTAATCTGTTGTTTATTATTTTTGTAGATTTTTGGTGAAGCAACTATCCCTTCTACTTCACACTCTTTTGAAGCATCAAGAAGGAACTCCTTGAAGCCTTCCCCGTCCACTGAAGCTGCAAACCATAGACATGGGCAAGGGAGCAGTAAAATTGGTCCTTCAAGTAGTCGGATGAATGTTCTTCACATAAGTTCTGCTAAATAAATGCTGAATATGGTAATTTTCTGGTTTATACTTTCGTGTGTGCATTGAGTACTACTGTCTATGTATGGCCCACTCATATCATTGACCACTGCTTATATTGTGCTATGTTTCTAGGTGTGAATCTGATCAAGAAGATTCCCGACATGCATACAAACATGGAGCTGCATATTATGGGGTATTGCTTGCAAGTGATCTGCCCATGGAGACTACAAATGTGCTACAAGGTTGATAAATTTCTTAGCTCATCTTTCGAGGCCAGTTTATGTTGCTCATTTTCCCCCTAAGGTGACTGCAAATGATTGTTTGGTATAAAATACAGACTGCACAGGCTTGGCTTCTTCGTTGTAGATAA
Protein sequence

>MS.gene69032.t1

METGKTKHPQLLYEAKLYNILQGGSGIPSIRWSGVDGEDNVLVMDLLGPSLEDLFVYCGRKFSLKTVLMLADQMMTRIEYVHSKGFLHRDIKPDNFLMGLGRKANLVYVIDFGLAKRYRDSTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQNLKAATKKQKYDKICEKKVSTPIEVLCKSHPVEFASYFHYCHSLTFDQRPDYGFLRRLFRELFAREGYKFDYVFDWTILKYQQSQKSRAQTHISPVPVASNNRAMPMDIDNQQGNVSAEQIRSDNATSSGVKFQFKSSGGKNLASENPLGKNIFGEATIPSTSHSFEASRRNSLKPSPSTEAANHRHGQGSSKIGPSSSRMNVLHISVNLIKKIPDMHTNMELHIMGYCLQVICPWRLQMCYKTAQAWLLRCR