Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69128.t1 | XP_013462104.1 | 93.2 | 235 | 16 | 0 | 5 | 239 | 81 | 315 | 2.40E-105 | 391.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69128.t1 | Q9LN63 | 58.9 | 246 | 79 | 8 | 12 | 239 | 94 | 335 | 1.1e-45 | 184.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69128.t1 | B7FHU2 | 93.2 | 235 | 16 | 0 | 5 | 239 | 81 | 315 | 1.7e-105 | 391.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene69128.t1 | TF | BES1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69128.t1 | MTR_3g111680 | 97.881 | 236 | 5 | 0 | 4 | 239 | 80 | 315 | 2.65e-169 | 469 |
| MS.gene69128.t1 | MTR_5g019550 | 49.754 | 203 | 78 | 8 | 55 | 237 | 41 | 239 | 2.97e-47 | 156 |
| MS.gene69128.t1 | MTR_5g019550 | 49.754 | 203 | 78 | 8 | 55 | 237 | 125 | 323 | 3.22e-46 | 156 |
| MS.gene69128.t1 | MTR_1g021990 | 40.758 | 211 | 65 | 5 | 27 | 237 | 97 | 247 | 2.12e-35 | 126 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69128.t1 | AT1G75080 | 59.426 | 244 | 77 | 9 | 12 | 237 | 95 | 334 | 2.25e-70 | 219 |
| MS.gene69128.t1 | AT1G75080 | 59.426 | 244 | 77 | 9 | 12 | 237 | 95 | 334 | 2.25e-70 | 219 |
| MS.gene69128.t1 | AT1G19350 | 58.130 | 246 | 81 | 8 | 12 | 239 | 94 | 335 | 8.70e-69 | 215 |
| MS.gene69128.t1 | AT1G19350 | 58.130 | 246 | 81 | 8 | 12 | 239 | 94 | 335 | 8.70e-69 | 215 |
| MS.gene69128.t1 | AT1G19350 | 58.130 | 246 | 81 | 8 | 12 | 239 | 94 | 335 | 8.70e-69 | 215 |
| MS.gene69128.t1 | AT1G19350 | 58.130 | 246 | 81 | 8 | 12 | 239 | 94 | 335 | 8.70e-69 | 215 |
| MS.gene69128.t1 | AT1G19350 | 58.130 | 246 | 81 | 8 | 12 | 239 | 116 | 357 | 9.14e-69 | 215 |
| MS.gene69128.t1 | AT3G50750 | 47.642 | 212 | 79 | 5 | 24 | 234 | 90 | 270 | 3.17e-35 | 127 |
| MS.gene69128.t1 | AT4G36780 | 51.000 | 100 | 47 | 1 | 36 | 133 | 112 | 211 | 2.95e-12 | 65.1 |
Find 87 sgRNAs with CRISPR-Local
Find 86 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAGGTCAAGCCTTGGGTT+GGG | 0.244939 | 3.4:+96555680 | MS.gene69128:CDS |
| TTATGCTGCTCATTAATTAC+AGG | 0.267539 | 3.4:-96555601 | None:intergenic |
| TGAAGTGGGCTTGGATGATT+TGG | 0.316017 | 3.4:+96555714 | MS.gene69128:CDS |
| AGGATTTCAGAGCCAGAGTT+TGG | 0.317045 | 3.4:+96555655 | MS.gene69128:CDS |
| CCATGTTGGAATCATGGGTT+TGG | 0.326849 | 3.4:-96555362 | None:intergenic |
| CATGTTGGAATCATGGGTTT+GGG | 0.346172 | 3.4:-96555361 | None:intergenic |
| GAATCAATTGCCAAAGCATC+AGG | 0.379878 | 3.4:+96555385 | MS.gene69128:CDS |
| GTGCAGGTCAAGCCTTGGGT+TGG | 0.384192 | 3.4:+96555679 | MS.gene69128:CDS |
| GGATTTCAGAGCCAGAGTTT+GGG | 0.385062 | 3.4:+96555656 | MS.gene69128:CDS |
| TTGGAGCTTACTCTTGGAAA+TGG | 0.386518 | 3.4:+96555733 | MS.gene69128:CDS |
| TGGGGTGCAGGTCAAGCCTT+GGG | 0.386786 | 3.4:+96555675 | MS.gene69128:CDS |
| TGATTCCCATGTTGGAATCA+TGG | 0.387349 | 3.4:-96555368 | None:intergenic |
| TTTGTGAATGAACACTGAAC+AGG | 0.392154 | 3.4:+96555045 | None:intergenic |
| TTGGGGTGCAGGTCAAGCCT+TGG | 0.395856 | 3.4:+96555674 | MS.gene69128:CDS |
| AGAGCCAGAGTTTGGGGTGC+AGG | 0.400385 | 3.4:+96555663 | MS.gene69128:CDS |
| GAATAGTAGGTGGTGTATAA+AGG | 0.410535 | 3.4:-96555468 | None:intergenic |
| GATGATTTGGAGCTTACTCT+TGG | 0.411343 | 3.4:+96555727 | MS.gene69128:CDS |
| GGCGCAGAAGCTGCGAAGAA+AGG | 0.412024 | 3.4:-96555424 | None:intergenic |
| GTATCAGACTCATCACATTC+AGG | 0.421362 | 3.4:-96555490 | None:intergenic |
| CTTGAAGTTGGTGATGAGAT+AGG | 0.423563 | 3.4:-96555334 | None:intergenic |
| GGGAACATGCTGCGAGCATA+TGG | 0.428278 | 3.4:-96555259 | None:intergenic |
| AAGGATTCATGAAGTGGGCT+TGG | 0.442178 | 3.4:+96555705 | MS.gene69128:CDS |
| GCAGGTCAAGCCTTGGGTTG+GGG | 0.445549 | 3.4:+96555681 | MS.gene69128:CDS |
| GAAACACCAGGCGACGGTGC+AGG | 0.453828 | 3.4:+96555079 | MS.gene69128:CDS |
| GAAGGATGTCCCTGATGCTT+TGG | 0.455024 | 3.4:-96555395 | None:intergenic |
| TAGGTGGTGTATAAAGGTTC+CGG | 0.456174 | 3.4:-96555462 | None:intergenic |
| TCATCACATTCAGGAATAGT+AGG | 0.457941 | 3.4:-96555481 | None:intergenic |
| ATTTCCGAGCCCGTCTCGTA+TGG | 0.458323 | 3.4:+96555207 | MS.gene69128:CDS |
| AAGAGGAAGATGGGCTAACT+TGG | 0.459342 | 3.4:-96555183 | None:intergenic |
| AAATTTCCTGCACCGTCGCC+TGG | 0.461316 | 3.4:-96555085 | None:intergenic |
| CAAAGGTGGGAGAGACATGT+TGG | 0.476794 | 3.4:-96555281 | None:intergenic |
| TGAACACTGAACAGGGATCA+AGG | 0.477060 | 3.4:+96555053 | MS.gene69128:CDS |
| GATTCCCATGTTGGAATCAT+GGG | 0.479782 | 3.4:-96555367 | None:intergenic |
| GATACTTCTACTGTTGAGTC+TGG | 0.480255 | 3.4:+96555508 | MS.gene69128:CDS |
| TAGCAGAAGCTGCAAAGGCT+TGG | 0.482094 | 3.4:-96555546 | None:intergenic |
| TCAAGCCTTGGGTTGGGGAA+AGG | 0.483086 | 3.4:+96555686 | MS.gene69128:CDS |
| GCATCCATACGAGACGGGCT+CGG | 0.486953 | 3.4:-96555211 | None:intergenic |
| TGGTAGGAAGGGATTGGACT+TGG | 0.487033 | 3.4:-96555163 | None:intergenic |
| AATGATGATGAAAGAGGACT+TGG | 0.489656 | 3.4:-96555139 | None:intergenic |
| TTGGCAATTGATTCCCATGT+TGG | 0.490224 | 3.4:-96555376 | None:intergenic |
| ATCTCCTGCATTCTGTTATG+AGG | 0.491673 | 3.4:-96555631 | None:intergenic |
| TTGACCTGCACCCCAAACTC+TGG | 0.493982 | 3.4:-96555667 | None:intergenic |
| GCGCAGAAGCTGCGAAGAAA+GGG | 0.494226 | 3.4:-96555423 | None:intergenic |
| AAAGGTGGGAGAGACATGTT+GGG | 0.494510 | 3.4:-96555280 | None:intergenic |
| GGTTTGGGATTTCTTGAAGT+TGG | 0.496117 | 3.4:-96555346 | None:intergenic |
| AGGCTTGGAAATTCAACCAT+TGG | 0.499150 | 3.4:-96555531 | None:intergenic |
| GGTTTCATAAAGTTCAATGT+AGG | 0.500604 | 3.4:-96555580 | None:intergenic |
| CTCGGAAATGAAGAGGAAGA+TGG | 0.501823 | 3.4:-96555193 | None:intergenic |
| GATGGGCTAACTTGGTAGGA+AGG | 0.510153 | 3.4:-96555175 | None:intergenic |
| TGCGAAGAAAGGGTGATTGA+AGG | 0.517777 | 3.4:-96555413 | None:intergenic |
| GATGAGATAGGTGGCGTCAC+AGG | 0.527145 | 3.4:-96555322 | None:intergenic |
| CTAACTTGGTAGGAAGGGAT+TGG | 0.532618 | 3.4:-96555169 | None:intergenic |
| TGATTTAGCAGAAGCTGCAA+AGG | 0.535526 | 3.4:-96555551 | None:intergenic |
| TGTTTGCATCCATACGAGAC+GGG | 0.538446 | 3.4:-96555216 | None:intergenic |
| CTGTTTGATATTCTCAAAGG+TGG | 0.543504 | 3.4:-96555295 | None:intergenic |
| TTCCGGTGGGATGGACTAGT+AGG | 0.544807 | 3.4:-96555445 | None:intergenic |
| GTATAAAGGTTCCGGTGGGA+TGG | 0.546631 | 3.4:-96555454 | None:intergenic |
| TGAATCCTTTCCCCAACCCA+AGG | 0.565111 | 3.4:-96555691 | None:intergenic |
| GGATCAAGGGCAGAAACACC+AGG | 0.568579 | 3.4:+96555067 | MS.gene69128:CDS |
| GGAAGATGGGCTAACTTGGT+AGG | 0.570068 | 3.4:-96555179 | None:intergenic |
| ATGGGCTAACTTGGTAGGAA+GGG | 0.578259 | 3.4:-96555174 | None:intergenic |
| CCAAACCCATGATTCCAACA+TGG | 0.578571 | 3.4:+96555362 | MS.gene69128:CDS |
| CTACTGTTGAGTCTGGCCAA+TGG | 0.579821 | 3.4:+96555515 | MS.gene69128:CDS |
| TTGTTTGCATCCATACGAGA+CGG | 0.580413 | 3.4:-96555217 | None:intergenic |
| CTTGGAAATGATGATGAAAG+AGG | 0.585676 | 3.4:-96555145 | None:intergenic |
| TATACTAGTCTTCATTAACT+AGG | 0.587526 | 3.4:-96555763 | None:intergenic |
| TCGGAAATGAAGAGGAAGAT+GGG | 0.591259 | 3.4:-96555192 | None:intergenic |
| GAACACTGAACAGGGATCAA+GGG | 0.592233 | 3.4:+96555054 | MS.gene69128:CDS |
| TTGTGAATGAACACTGAACA+GGG | 0.596122 | 3.4:+96555046 | None:intergenic |
| GCTGCCTCATAACAGAATGC+AGG | 0.597111 | 3.4:+96555627 | MS.gene69128:CDS |
| GATTTCAGAGCCAGAGTTTG+GGG | 0.597331 | 3.4:+96555657 | MS.gene69128:CDS |
| GTGGTGTATAAAGGTTCCGG+TGG | 0.599334 | 3.4:-96555459 | None:intergenic |
| TGGGGAAAGGATTCATGAAG+TGG | 0.599526 | 3.4:+96555699 | MS.gene69128:CDS |
| GCGCTGTTTGATATTCTCAA+AGG | 0.602416 | 3.4:-96555298 | None:intergenic |
| CGCCTACTAGTCCATCCCAC+CGG | 0.608831 | 3.4:+96555443 | MS.gene69128:CDS |
| TGTTTGATATTCTCAAAGGT+GGG | 0.611100 | 3.4:-96555294 | None:intergenic |
| ATAACAGAATGCAGGAGATG+AGG | 0.612424 | 3.4:+96555635 | MS.gene69128:CDS |
| AGGGCAGAAACACCAGGCGA+CGG | 0.612624 | 3.4:+96555073 | MS.gene69128:CDS |
| CAAACCCATGATTCCAACAT+GGG | 0.619565 | 3.4:+96555363 | MS.gene69128:CDS |
| AGACGGGCTCGGAAATGAAG+AGG | 0.620195 | 3.4:-96555200 | None:intergenic |
| GCTTACTCTTGGAAATGGAA+AGG | 0.624748 | 3.4:+96555738 | MS.gene69128:CDS |
| GGGGAAAGGATTCATGAAGT+GGG | 0.628370 | 3.4:+96555700 | MS.gene69128:CDS |
| AATCAATTGCCAAAGCATCA+GGG | 0.645925 | 3.4:+96555386 | MS.gene69128:CDS |
| TCACATTCAGGAATAGTAGG+TGG | 0.669687 | 3.4:-96555478 | None:intergenic |
| TGGTGTATAAAGGTTCCGGT+GGG | 0.684999 | 3.4:-96555458 | None:intergenic |
| AAGGTGGGAGAGACATGTTG+GGG | 0.734444 | 3.4:-96555279 | None:intergenic |
| GAAGTTGGTGATGAGATAGG+TGG | 0.736539 | 3.4:-96555331 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| GGTTTCATAAAGTTCAATGT+AGG | - | chr3.4:96555583-96555602 | None:intergenic | 30.0% | |
| TGTTTGATATTCTCAAAGGT+GGG | - | chr3.4:96555297-96555316 | None:intergenic | 30.0% | |
| TTATGCTGCTCATTAATTAC+AGG | - | chr3.4:96555604-96555623 | None:intergenic | 30.0% | |
| ! | TTGGATTTTGCGATGAAAAT+GGG | - | chr3.4:96555123-96555142 | None:intergenic | 30.0% |
| CTGTTTGATATTCTCAAAGG+TGG | - | chr3.4:96555298-96555317 | None:intergenic | 35.0% | |
| GAATAGTAGGTGGTGTATAA+AGG | - | chr3.4:96555471-96555490 | None:intergenic | 35.0% | |
| TCATCACATTCAGGAATAGT+AGG | - | chr3.4:96555484-96555503 | None:intergenic | 35.0% | |
| ! | AATCAATTGCCAAAGCATCA+GGG | + | chr3.4:96555386-96555405 | MS.gene69128:CDS | 35.0% |
| ! | AATGATGATGAAAGAGGACT+TGG | - | chr3.4:96555142-96555161 | None:intergenic | 35.0% |
| ! | CTTGGAAATGATGATGAAAG+AGG | - | chr3.4:96555148-96555167 | None:intergenic | 35.0% |
| ! | CTTGGATTTTGCGATGAAAA+TGG | - | chr3.4:96555124-96555143 | None:intergenic | 35.0% |
| AGGCTTGGAAATTCAACCAT+TGG | - | chr3.4:96555534-96555553 | None:intergenic | 40.0% | |
| ATAACAGAATGCAGGAGATG+AGG | + | chr3.4:96555635-96555654 | MS.gene69128:CDS | 40.0% | |
| ATCTCCTGCATTCTGTTATG+AGG | - | chr3.4:96555634-96555653 | None:intergenic | 40.0% | |
| CAAACCCATGATTCCAACAT+GGG | + | chr3.4:96555363-96555382 | MS.gene69128:CDS | 40.0% | |
| CATGTTGGAATCATGGGTTT+GGG | - | chr3.4:96555364-96555383 | None:intergenic | 40.0% | |
| GATACTTCTACTGTTGAGTC+TGG | + | chr3.4:96555508-96555527 | MS.gene69128:CDS | 40.0% | |
| GATTCCCATGTTGGAATCAT+GGG | - | chr3.4:96555370-96555389 | None:intergenic | 40.0% | |
| GCGCTGTTTGATATTCTCAA+AGG | - | chr3.4:96555301-96555320 | None:intergenic | 40.0% | |
| GCTTACTCTTGGAAATGGAA+AGG | + | chr3.4:96555738-96555757 | MS.gene69128:CDS | 40.0% | |
| GTATCAGACTCATCACATTC+AGG | - | chr3.4:96555493-96555512 | None:intergenic | 40.0% | |
| TAGGTGGTGTATAAAGGTTC+CGG | - | chr3.4:96555465-96555484 | None:intergenic | 40.0% | |
| TCACATTCAGGAATAGTAGG+TGG | - | chr3.4:96555481-96555500 | None:intergenic | 40.0% | |
| TCGGAAATGAAGAGGAAGAT+GGG | - | chr3.4:96555195-96555214 | None:intergenic | 40.0% | |
| TGATTCCCATGTTGGAATCA+TGG | - | chr3.4:96555371-96555390 | None:intergenic | 40.0% | |
| TGATTTAGCAGAAGCTGCAA+AGG | - | chr3.4:96555554-96555573 | None:intergenic | 40.0% | |
| TTGGAGCTTACTCTTGGAAA+TGG | + | chr3.4:96555733-96555752 | MS.gene69128:CDS | 40.0% | |
| TTGTTTGCATCCATACGAGA+CGG | - | chr3.4:96555220-96555239 | None:intergenic | 40.0% | |
| ! | GAATCAATTGCCAAAGCATC+AGG | + | chr3.4:96555385-96555404 | MS.gene69128:CDS | 40.0% |
| ! | GATGATTTGGAGCTTACTCT+TGG | + | chr3.4:96555727-96555746 | MS.gene69128:CDS | 40.0% |
| ! | GGTTTGGGATTTCTTGAAGT+TGG | - | chr3.4:96555349-96555368 | None:intergenic | 40.0% |
| ! | TTGGCAATTGATTCCCATGT+TGG | - | chr3.4:96555379-96555398 | None:intergenic | 40.0% |
| !! | CTTGAAGTTGGTGATGAGAT+AGG | - | chr3.4:96555337-96555356 | None:intergenic | 40.0% |
| AAAGGTGGGAGAGACATGTT+GGG | - | chr3.4:96555283-96555302 | None:intergenic | 45.0% | |
| AGGATTTCAGAGCCAGAGTT+TGG | + | chr3.4:96555655-96555674 | MS.gene69128:CDS | 45.0% | |
| CCAAACCCATGATTCCAACA+TGG | + | chr3.4:96555362-96555381 | MS.gene69128:CDS | 45.0% | |
| CCATGTTGGAATCATGGGTT+TGG | - | chr3.4:96555365-96555384 | None:intergenic | 45.0% | |
| CTAACTTGGTAGGAAGGGAT+TGG | - | chr3.4:96555172-96555191 | None:intergenic | 45.0% | |
| CTCGGAAATGAAGAGGAAGA+TGG | - | chr3.4:96555196-96555215 | None:intergenic | 45.0% | |
| GAACACTGAACAGGGATCAA+GGG | + | chr3.4:96555054-96555073 | MS.gene69128:CDS | 45.0% | |
| GATTTCAGAGCCAGAGTTTG+GGG | + | chr3.4:96555657-96555676 | MS.gene69128:CDS | 45.0% | |
| GGATTTCAGAGCCAGAGTTT+GGG | + | chr3.4:96555656-96555675 | MS.gene69128:CDS | 45.0% | |
| GGGGAAAGGATTCATGAAGT+GGG | + | chr3.4:96555700-96555719 | MS.gene69128:CDS | 45.0% | |
| TGAACACTGAACAGGGATCA+AGG | + | chr3.4:96555053-96555072 | MS.gene69128:CDS | 45.0% | |
| TGCGAAGAAAGGGTGATTGA+AGG | - | chr3.4:96555416-96555435 | None:intergenic | 45.0% | |
| TGGGGAAAGGATTCATGAAG+TGG | + | chr3.4:96555699-96555718 | MS.gene69128:CDS | 45.0% | |
| TGGTGTATAAAGGTTCCGGT+GGG | - | chr3.4:96555461-96555480 | None:intergenic | 45.0% | |
| TGTTTGCATCCATACGAGAC+GGG | - | chr3.4:96555219-96555238 | None:intergenic | 45.0% | |
| ! | AAGGATTCATGAAGTGGGCT+TGG | + | chr3.4:96555705-96555724 | MS.gene69128:CDS | 45.0% |
| ! | ATGGGCTAACTTGGTAGGAA+GGG | - | chr3.4:96555177-96555196 | None:intergenic | 45.0% |
| ! | TGAAGTGGGCTTGGATGATT+TGG | + | chr3.4:96555714-96555733 | MS.gene69128:CDS | 45.0% |
| !! | AAGAGGAAGATGGGCTAACT+TGG | - | chr3.4:96555186-96555205 | None:intergenic | 45.0% |
| !! | GAAGTTGGTGATGAGATAGG+TGG | - | chr3.4:96555334-96555353 | None:intergenic | 45.0% |
| AAGGTGGGAGAGACATGTTG+GGG | - | chr3.4:96555282-96555301 | None:intergenic | 50.0% | |
| CAAAGGTGGGAGAGACATGT+TGG | - | chr3.4:96555284-96555303 | None:intergenic | 50.0% | |
| CTACTGTTGAGTCTGGCCAA+TGG | + | chr3.4:96555515-96555534 | MS.gene69128:CDS | 50.0% | |
| GAAGGATGTCCCTGATGCTT+TGG | - | chr3.4:96555398-96555417 | None:intergenic | 50.0% | |
| GCTGCCTCATAACAGAATGC+AGG | + | chr3.4:96555627-96555646 | MS.gene69128:CDS | 50.0% | |
| GTATAAAGGTTCCGGTGGGA+TGG | - | chr3.4:96555457-96555476 | None:intergenic | 50.0% | |
| GTGGTGTATAAAGGTTCCGG+TGG | - | chr3.4:96555462-96555481 | None:intergenic | 50.0% | |
| TAGCAGAAGCTGCAAAGGCT+TGG | - | chr3.4:96555549-96555568 | None:intergenic | 50.0% | |
| TGAATCCTTTCCCCAACCCA+AGG | - | chr3.4:96555694-96555713 | None:intergenic | 50.0% | |
| TGGTAGGAAGGGATTGGACT+TGG | - | chr3.4:96555166-96555185 | None:intergenic | 50.0% | |
| !! | GATGGGCTAACTTGGTAGGA+AGG | - | chr3.4:96555178-96555197 | None:intergenic | 50.0% |
| !! | GGAAGATGGGCTAACTTGGT+AGG | - | chr3.4:96555182-96555201 | None:intergenic | 50.0% |
| AAATTTCCTGCACCGTCGCC+TGG | - | chr3.4:96555088-96555107 | None:intergenic | 55.0% | |
| ATTTCCGAGCCCGTCTCGTA+TGG | + | chr3.4:96555207-96555226 | MS.gene69128:CDS | 55.0% | |
| GATGAGATAGGTGGCGTCAC+AGG | - | chr3.4:96555325-96555344 | None:intergenic | 55.0% | |
| GCGCAGAAGCTGCGAAGAAA+GGG | - | chr3.4:96555426-96555445 | None:intergenic | 55.0% | |
| GGATCAAGGGCAGAAACACC+AGG | + | chr3.4:96555067-96555086 | MS.gene69128:CDS | 55.0% | |
| GGGAACATGCTGCGAGCATA+TGG | - | chr3.4:96555262-96555281 | None:intergenic | 55.0% | |
| TGCAGGTCAAGCCTTGGGTT+GGG | + | chr3.4:96555680-96555699 | MS.gene69128:CDS | 55.0% | |
| TTGACCTGCACCCCAAACTC+TGG | - | chr3.4:96555670-96555689 | None:intergenic | 55.0% | |
| ! | AGACGGGCTCGGAAATGAAG+AGG | - | chr3.4:96555203-96555222 | None:intergenic | 55.0% |
| !! | TCAAGCCTTGGGTTGGGGAA+AGG | + | chr3.4:96555686-96555705 | MS.gene69128:CDS | 55.0% |
| !! | TTCCGGTGGGATGGACTAGT+AGG | - | chr3.4:96555448-96555467 | None:intergenic | 55.0% |
| AGGGCAGAAACACCAGGCGA+CGG | + | chr3.4:96555073-96555092 | MS.gene69128:CDS | 60.0% | |
| CGCCTACTAGTCCATCCCAC+CGG | + | chr3.4:96555443-96555462 | MS.gene69128:CDS | 60.0% | |
| GGCGCAGAAGCTGCGAAGAA+AGG | - | chr3.4:96555427-96555446 | None:intergenic | 60.0% | |
| GTGCAGGTCAAGCCTTGGGT+TGG | + | chr3.4:96555679-96555698 | MS.gene69128:CDS | 60.0% | |
| TGGGGTGCAGGTCAAGCCTT+GGG | + | chr3.4:96555675-96555694 | MS.gene69128:CDS | 60.0% | |
| TTGGGGTGCAGGTCAAGCCT+TGG | + | chr3.4:96555674-96555693 | MS.gene69128:CDS | 60.0% | |
| ! | AGAGCCAGAGTTTGGGGTGC+AGG | + | chr3.4:96555663-96555682 | MS.gene69128:CDS | 60.0% |
| ! | GCAGGTCAAGCCTTGGGTTG+GGG | + | chr3.4:96555681-96555700 | MS.gene69128:CDS | 60.0% |
| ! | GCATCCATACGAGACGGGCT+CGG | - | chr3.4:96555214-96555233 | None:intergenic | 60.0% |
| GAAACACCAGGCGACGGTGC+AGG | + | chr3.4:96555079-96555098 | MS.gene69128:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 96555052 | 96555771 | 96555052 | ID=MS.gene69128 |
| chr3.4 | mRNA | 96555052 | 96555771 | 96555052 | ID=MS.gene69128.t1;Parent=MS.gene69128 |
| chr3.4 | exon | 96555052 | 96555771 | 96555052 | ID=MS.gene69128.t1.exon1;Parent=MS.gene69128.t1 |
| chr3.4 | CDS | 96555052 | 96555771 | 96555052 | ID=cds.MS.gene69128.t1;Parent=MS.gene69128.t1 |
| Gene Sequence |
| Protein sequence |
