Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69243.t1 | XP_024642224.1 | 62.6 | 641 | 156 | 3 | 21 | 577 | 20 | 660 | 6.70E-220 | 773.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69243.t1 | Q9SWG3 | 26.7 | 729 | 407 | 17 | 1 | 623 | 1 | 708 | 9.9e-63 | 243.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69243.t1 | A0A2Z6M8U9 | 59.4 | 652 | 186 | 4 | 1 | 574 | 1 | 651 | 1.0e-214 | 756.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene69243.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69243.t1 | MTR_0856s0010 | 63.830 | 141 | 49 | 1 | 21 | 159 | 20 | 160 | 1.90e-53 | 181 |
MS.gene69243.t1 | MTR_7g115320 | 81.818 | 55 | 7 | 1 | 122 | 176 | 8 | 59 | 5.87e-23 | 94.0 |
MS.gene69243.t1 | MTR_7g446060 | 43.023 | 86 | 49 | 0 | 112 | 197 | 3 | 88 | 3.84e-18 | 82.0 |
MS.gene69243.t1 | MTR_1g008290 | 32.520 | 123 | 80 | 1 | 104 | 226 | 25 | 144 | 4.83e-16 | 76.3 |
MS.gene69243.t1 | MTR_6g051425 | 26.214 | 206 | 138 | 4 | 36 | 230 | 20 | 222 | 2.70e-14 | 75.1 |
MS.gene69243.t1 | MTR_1g083640 | 24.545 | 220 | 143 | 5 | 32 | 228 | 50 | 269 | 1.08e-12 | 69.7 |
MS.gene69243.t1 | MTR_1g013060 | 24.402 | 209 | 148 | 3 | 31 | 230 | 22 | 229 | 3.21e-12 | 67.4 |
MS.gene69243.t1 | MTR_0558s0020 | 23.636 | 220 | 145 | 5 | 32 | 228 | 35 | 254 | 4.53e-12 | 67.8 |
MS.gene69243.t1 | MTR_7g061980 | 33.333 | 108 | 68 | 2 | 32 | 136 | 9 | 115 | 2.17e-11 | 62.0 |
MS.gene69243.t1 | MTR_7g074790 | 27.219 | 169 | 100 | 5 | 32 | 196 | 9 | 158 | 3.07e-11 | 64.3 |
MS.gene69243.t1 | MTR_5g039760 | 27.225 | 191 | 113 | 4 | 36 | 223 | 13 | 180 | 4.92e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69243.t1 | AT1G52520 | 26.861 | 618 | 352 | 17 | 33 | 562 | 85 | 690 | 9.63e-54 | 197 |
MS.gene69243.t1 | AT3G22170 | 33.893 | 298 | 186 | 3 | 259 | 555 | 372 | 659 | 5.70e-50 | 188 |
MS.gene69243.t1 | AT3G22170 | 25.311 | 241 | 131 | 6 | 17 | 230 | 43 | 261 | 4.44e-12 | 70.1 |
MS.gene69243.t1 | AT3G22170 | 33.893 | 298 | 186 | 3 | 259 | 555 | 372 | 659 | 5.70e-50 | 188 |
MS.gene69243.t1 | AT3G22170 | 25.311 | 241 | 131 | 6 | 17 | 230 | 43 | 261 | 4.44e-12 | 70.1 |
MS.gene69243.t1 | AT4G38180 | 37.109 | 256 | 155 | 3 | 256 | 510 | 384 | 634 | 1.30e-49 | 186 |
MS.gene69243.t1 | AT4G38180 | 26.415 | 212 | 146 | 5 | 27 | 230 | 67 | 276 | 3.35e-16 | 83.6 |
MS.gene69243.t1 | AT4G15090 | 32.154 | 311 | 201 | 3 | 257 | 566 | 361 | 662 | 1.92e-49 | 186 |
MS.gene69243.t1 | AT4G15090 | 28.346 | 254 | 156 | 7 | 1 | 230 | 1 | 252 | 3.66e-21 | 99.4 |
MS.gene69243.t1 | AT4G15090 | 32.154 | 311 | 201 | 3 | 257 | 566 | 361 | 662 | 1.92e-49 | 186 |
MS.gene69243.t1 | AT4G15090 | 28.346 | 254 | 156 | 7 | 1 | 230 | 1 | 252 | 3.66e-21 | 99.4 |
MS.gene69243.t1 | AT4G15090 | 32.154 | 311 | 201 | 3 | 257 | 566 | 361 | 662 | 1.92e-49 | 186 |
MS.gene69243.t1 | AT4G15090 | 28.346 | 254 | 156 | 7 | 1 | 230 | 1 | 252 | 3.66e-21 | 99.4 |
MS.gene69243.t1 | AT4G15090 | 32.154 | 311 | 201 | 3 | 257 | 566 | 361 | 662 | 1.92e-49 | 186 |
MS.gene69243.t1 | AT4G15090 | 28.346 | 254 | 156 | 7 | 1 | 230 | 1 | 252 | 3.66e-21 | 99.4 |
MS.gene69243.t1 | AT4G15090 | 32.154 | 311 | 201 | 3 | 257 | 566 | 361 | 662 | 1.92e-49 | 186 |
MS.gene69243.t1 | AT4G15090 | 28.346 | 254 | 156 | 7 | 1 | 230 | 1 | 252 | 3.66e-21 | 99.4 |
MS.gene69243.t1 | AT1G76320 | 30.128 | 312 | 196 | 6 | 257 | 562 | 298 | 593 | 5.18e-41 | 160 |
MS.gene69243.t1 | AT1G76320 | 26.066 | 211 | 144 | 4 | 37 | 246 | 1 | 200 | 4.20e-15 | 79.7 |
MS.gene69243.t1 | AT1G76320 | 30.128 | 312 | 196 | 6 | 257 | 562 | 298 | 593 | 5.24e-41 | 160 |
MS.gene69243.t1 | AT1G76320 | 26.066 | 211 | 144 | 4 | 37 | 246 | 1 | 200 | 4.56e-15 | 79.7 |
MS.gene69243.t1 | AT1G76320 | 30.128 | 312 | 196 | 6 | 257 | 562 | 298 | 593 | 5.30e-41 | 160 |
MS.gene69243.t1 | AT1G76320 | 26.066 | 211 | 144 | 4 | 37 | 246 | 1 | 200 | 4.14e-15 | 79.7 |
MS.gene69243.t1 | AT1G76320 | 30.128 | 312 | 196 | 6 | 257 | 562 | 298 | 593 | 5.30e-41 | 160 |
MS.gene69243.t1 | AT1G76320 | 26.066 | 211 | 144 | 4 | 37 | 246 | 1 | 200 | 4.14e-15 | 79.7 |
MS.gene69243.t1 | AT2G32250 | 31.596 | 307 | 200 | 4 | 257 | 562 | 305 | 602 | 1.43e-39 | 156 |
MS.gene69243.t1 | AT2G32250 | 31.596 | 307 | 200 | 4 | 257 | 562 | 305 | 602 | 1.69e-39 | 156 |
MS.gene69243.t1 | AT2G32250 | 31.596 | 307 | 200 | 4 | 257 | 562 | 305 | 602 | 1.69e-39 | 156 |
MS.gene69243.t1 | AT2G32250 | 31.596 | 307 | 200 | 4 | 257 | 562 | 264 | 561 | 1.78e-39 | 156 |
MS.gene69243.t1 | AT2G32250 | 31.596 | 307 | 200 | 4 | 257 | 562 | 305 | 602 | 1.80e-39 | 156 |
MS.gene69243.t1 | AT2G32250 | 31.596 | 307 | 200 | 4 | 257 | 562 | 305 | 602 | 1.80e-39 | 156 |
MS.gene69243.t1 | AT2G32250 | 31.596 | 307 | 200 | 4 | 257 | 562 | 305 | 602 | 1.80e-39 | 156 |
MS.gene69243.t1 | AT2G32250 | 31.596 | 307 | 200 | 4 | 257 | 562 | 264 | 561 | 1.81e-39 | 156 |
MS.gene69243.t1 | AT4G38170 | 29.532 | 342 | 231 | 4 | 236 | 576 | 133 | 465 | 7.96e-39 | 152 |
MS.gene69243.t1 | AT4G19990 | 30.961 | 281 | 183 | 4 | 259 | 536 | 254 | 526 | 4.72e-37 | 148 |
MS.gene69243.t1 | AT4G19990 | 30.961 | 281 | 183 | 4 | 259 | 536 | 311 | 583 | 5.14e-37 | 149 |
MS.gene69243.t1 | AT4G19990 | 30.961 | 281 | 183 | 4 | 259 | 536 | 311 | 583 | 5.14e-37 | 149 |
MS.gene69243.t1 | AT4G19990 | 30.961 | 281 | 183 | 4 | 259 | 536 | 311 | 583 | 6.30e-37 | 148 |
MS.gene69243.t1 | AT4G19990 | 30.961 | 281 | 183 | 4 | 259 | 536 | 325 | 597 | 7.10e-37 | 148 |
MS.gene69243.t1 | AT4G19990 | 30.961 | 281 | 183 | 4 | 259 | 536 | 311 | 583 | 7.67e-37 | 148 |
MS.gene69243.t1 | AT4G19990 | 30.961 | 281 | 183 | 4 | 259 | 536 | 311 | 583 | 7.67e-37 | 148 |
MS.gene69243.t1 | AT2G27110 | 29.032 | 310 | 209 | 6 | 256 | 562 | 184 | 485 | 9.04e-34 | 138 |
MS.gene69243.t1 | AT2G27110 | 29.032 | 310 | 209 | 6 | 256 | 562 | 329 | 630 | 1.13e-33 | 139 |
MS.gene69243.t1 | AT2G27110 | 29.032 | 310 | 209 | 6 | 256 | 562 | 329 | 630 | 1.13e-33 | 139 |
MS.gene69243.t1 | AT3G06250 | 31.621 | 253 | 163 | 4 | 256 | 508 | 460 | 702 | 5.98e-31 | 130 |
MS.gene69243.t1 | AT3G06250 | 31.621 | 253 | 163 | 4 | 256 | 508 | 460 | 702 | 5.98e-31 | 130 |
MS.gene69243.t1 | AT3G06250 | 31.621 | 253 | 163 | 4 | 256 | 508 | 460 | 702 | 5.98e-31 | 130 |
MS.gene69243.t1 | AT5G18960 | 31.225 | 253 | 164 | 4 | 256 | 508 | 484 | 726 | 1.67e-29 | 125 |
MS.gene69243.t1 | AT5G18960 | 31.225 | 253 | 164 | 4 | 256 | 508 | 484 | 726 | 1.67e-29 | 125 |
MS.gene69243.t1 | AT1G80010 | 25.566 | 309 | 220 | 6 | 252 | 555 | 402 | 705 | 2.73e-26 | 115 |
MS.gene69243.t1 | AT5G28530 | 21.561 | 538 | 322 | 20 | 33 | 507 | 55 | 555 | 4.19e-19 | 92.4 |
MS.gene69243.t1 | AT5G28530 | 21.190 | 538 | 320 | 19 | 33 | 507 | 55 | 551 | 1.14e-18 | 90.9 |
MS.gene69243.t1 | AT5G28530 | 24.255 | 235 | 123 | 6 | 295 | 507 | 417 | 618 | 1.36e-13 | 74.7 |
MS.gene69243.t1 | AT5G28530 | 23.404 | 235 | 121 | 5 | 295 | 507 | 417 | 614 | 3.69e-13 | 73.6 |
MS.gene69243.t1 | AT5G28530 | 23.404 | 235 | 121 | 5 | 295 | 507 | 417 | 614 | 3.69e-13 | 73.6 |
Find 109 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATATAGTTGATAGCTTTAA+TGG | 0.134545 | 3.2:+64025299 | MS.gene69243:CDS |
CGCAATGGACTGTGAATTTC+AGG | 0.161404 | 3.2:-64027300 | None:intergenic |
AAATATTTCTTCAACATAAT+TGG | 0.186937 | 3.2:-64026469 | None:intergenic |
TATGCTTATGTAAAGGGTTT+TGG | 0.230020 | 3.2:+64025398 | MS.gene69243:CDS |
ATACACTCATGCCAAGTTTA+AGG | 0.251022 | 3.2:+64026708 | MS.gene69243:CDS |
CCCCTGCATCATCATTGATT+TGG | 0.252069 | 3.2:-64025703 | None:intergenic |
GTGCTCTAGAAAGGGTTAAA+AGG | 0.261018 | 3.2:+64026953 | MS.gene69243:CDS |
TCTTGGCTTCGTTGTATGTT+AGG | 0.261143 | 3.2:+64026151 | MS.gene69243:CDS |
AGCATACATGCTTTCTTTGA+TGG | 0.264138 | 3.2:+64026526 | MS.gene69243:CDS |
TGGCATGAGTGTATTCTTCT+TGG | 0.271515 | 3.2:-64026699 | None:intergenic |
AACTACAAGGGATGAAAATT+TGG | 0.283525 | 3.2:+64027275 | MS.gene69243:CDS |
TATACAAGGAGCGTCATAAA+TGG | 0.299339 | 3.2:+64026443 | MS.gene69243:CDS |
GTGTTGGAGGATAAATTATT+TGG | 0.312974 | 3.2:+64026811 | MS.gene69243:CDS |
GGAAAGTATGCTTATGTAAA+GGG | 0.331933 | 3.2:+64025392 | MS.gene69243:CDS |
GCAAGTTTAGAGCCTATAGA+AGG | 0.337387 | 3.2:+64025329 | MS.gene69243:CDS |
TTCACCCTCCATATTCTTTG+AGG | 0.353586 | 3.2:-64026773 | None:intergenic |
TGCCAAGTTTAAGGAGGTTC+AGG | 0.368893 | 3.2:+64026717 | MS.gene69243:CDS |
TAAATCTAATTTGCCTTCCC+TGG | 0.372466 | 3.2:+64027179 | MS.gene69243:CDS |
CAATCTCTTGTCACAGATGC+TGG | 0.381102 | 3.2:+64025746 | MS.gene69243:CDS |
TTGAACAACCTTGACTTTGT+AGG | 0.382937 | 3.2:-64025641 | None:intergenic |
CTGTCAAATCTGTCCATTTG+TGG | 0.385079 | 3.2:-64027069 | None:intergenic |
TGTGCCACCCTCAAAGAATA+TGG | 0.386630 | 3.2:+64026765 | MS.gene69243:CDS |
ACTTTAAAGATACAATCTTT+TGG | 0.389328 | 3.2:-64026841 | None:intergenic |
TGCTCTAGAAAGGGTTAAAA+GGG | 0.399841 | 3.2:+64026954 | MS.gene69243:CDS |
AGAAAGGGTTAAAAGGGTTC+CGG | 0.403447 | 3.2:+64026960 | MS.gene69243:CDS |
CCAGTCACAAACTCAACATT+TGG | 0.414014 | 3.2:-64027566 | None:intergenic |
TTGAGCTAGAACATAATGAT+TGG | 0.414689 | 3.2:+64026410 | MS.gene69243:CDS |
TGTGTGTTTGTGCTCTAGAA+AGG | 0.415002 | 3.2:+64026944 | MS.gene69243:CDS |
CGTGCTAAAACATATTTAAC+CGG | 0.417091 | 3.2:-64026979 | None:intergenic |
TGGAAAGTATGCTTATGTAA+AGG | 0.421834 | 3.2:+64025391 | MS.gene69243:CDS |
CTATACACAGGTGGTGTTTG+TGG | 0.432429 | 3.2:+64026248 | MS.gene69243:intron |
CAGCATCTGTGACAAGAGAT+TGG | 0.436262 | 3.2:-64025745 | None:intergenic |
TCTCAGAAGTAGAGCAGAAA+AGG | 0.437003 | 3.2:+64026603 | MS.gene69243:CDS |
TGAACAACCTTGACTTTGTA+GGG | 0.438668 | 3.2:-64025640 | None:intergenic |
TCACCCTCCATATTCTTTGA+GGG | 0.440341 | 3.2:-64026772 | None:intergenic |
AACAAAATTGAAGCCACAAA+TGG | 0.441003 | 3.2:+64027056 | MS.gene69243:CDS |
TAGGGCTAATTGCATGAGAA+TGG | 0.448297 | 3.2:-64025622 | None:intergenic |
AACTTAGCAGTAACCTTAGC+AGG | 0.460373 | 3.2:-64025557 | None:intergenic |
TGCTAAGGTTACTGCTAAGT+TGG | 0.464729 | 3.2:+64025559 | MS.gene69243:CDS |
TACAAAGTCAAGGTTGTTCA+AGG | 0.468300 | 3.2:+64025643 | MS.gene69243:CDS |
AACAAGGAAAGGCGTGTCCT+TGG | 0.470951 | 3.2:+64025818 | MS.gene69243:CDS |
TGTAGGAATTCAACATTGAA+AGG | 0.471268 | 3.2:+64027507 | MS.gene69243:intron |
AAATCTAATTTGCCTTCCCT+GGG | 0.480149 | 3.2:+64027180 | MS.gene69243:CDS |
ATCCAAATCAATGATGATGC+AGG | 0.486659 | 3.2:+64025701 | MS.gene69243:CDS |
GAAATTATGTTAACAAGGAA+AGG | 0.492156 | 3.2:+64025807 | MS.gene69243:CDS |
TGCCTGAACCTCCTTAAACT+TGG | 0.493253 | 3.2:-64026719 | None:intergenic |
TGGATACAATAATTCCTTGT+GGG | 0.499822 | 3.2:+64026650 | MS.gene69243:CDS |
AACATAATGATTGGTTGAGT+GGG | 0.501667 | 3.2:+64026419 | MS.gene69243:CDS |
TCCCTGGGTGCTACAACTGT+TGG | 0.506642 | 3.2:+64027195 | MS.gene69243:CDS |
CCCTCCATATTCTTTGAGGG+TGG | 0.506659 | 3.2:-64026769 | None:intergenic |
CTTGTGCAAACATTTCTTTG+AGG | 0.510475 | 3.2:+64027092 | MS.gene69243:CDS |
GTGTGTTTGTGCTCTAGAAA+GGG | 0.511469 | 3.2:+64026945 | MS.gene69243:CDS |
GTAGGAATTCAACATTGAAA+GGG | 0.515603 | 3.2:+64027508 | MS.gene69243:intron |
CACTACTTACTGTGTGTTGG+AGG | 0.516062 | 3.2:+64026798 | MS.gene69243:CDS |
TCATCAAAGAAAGGAGATGA+TGG | 0.520348 | 3.2:+64025434 | MS.gene69243:CDS |
CAACTGAATTTGAAGAAAAG+TGG | 0.520523 | 3.2:+64026368 | MS.gene69243:CDS |
ATACAAGGAGCGTCATAAAT+GGG | 0.520746 | 3.2:+64026444 | MS.gene69243:CDS |
AAGAGAAGGGCGTCGTGTCT+CGG | 0.523325 | 3.2:+64025487 | MS.gene69243:CDS |
GAACATAATGATTGGTTGAG+TGG | 0.524953 | 3.2:+64026418 | MS.gene69243:CDS |
AAAATTTCTGAAAAGCTAAG+TGG | 0.533845 | 3.2:+64026283 | MS.gene69243:CDS |
TCATCCATTTGGATTTGCAA+TGG | 0.535248 | 3.2:-64027243 | None:intergenic |
GGAAGTGTCTTCAGTGTACA+AGG | 0.539848 | 3.2:-64025515 | None:intergenic |
TGCTCATTGTTTGAGTTCAG+AGG | 0.543976 | 3.2:+64026901 | MS.gene69243:CDS |
TTGGTTGAGTGGGTTATACA+AGG | 0.544566 | 3.2:+64026429 | MS.gene69243:CDS |
AAGACTAGATCATCAAAGAA+AGG | 0.545100 | 3.2:+64025425 | MS.gene69243:CDS |
GATGGTCTTGTACAGGTTGG+AGG | 0.545563 | 3.2:+64027695 | MS.gene69243:intron |
GAGTCCATTGCAAATCCAAA+TGG | 0.547158 | 3.2:+64027239 | MS.gene69243:CDS |
AGAGAATGAAGATTCAACTA+AGG | 0.547409 | 3.2:+64027131 | MS.gene69243:CDS |
ATTGTTTGATGCAAGTCCCA+TGG | 0.548801 | 3.2:+64027595 | MS.gene69243:CDS |
TCCAAATCAATGATGATGCA+GGG | 0.550568 | 3.2:+64025702 | MS.gene69243:CDS |
AATATCGGAAGTAGATGTCA+TGG | 0.555729 | 3.2:+64027745 | MS.gene69243:CDS |
TGTTAGAAATTATGTTAACA+AGG | 0.561593 | 3.2:+64025802 | MS.gene69243:CDS |
TGGAGGTGATATATCATTCA+CGG | 0.561891 | 3.2:+64027712 | MS.gene69243:CDS |
AATCACTACTTACTGTGTGT+TGG | 0.566426 | 3.2:+64026795 | MS.gene69243:CDS |
ATGCTATCATGCTCAAGAGA+AGG | 0.568074 | 3.2:+64025473 | MS.gene69243:CDS |
TCAATGATGATGCAGGGGTG+AGG | 0.569499 | 3.2:+64025708 | MS.gene69243:CDS |
ATGTTAGGAAAAGCCCCAAA+AGG | 0.570332 | 3.2:+64026166 | MS.gene69243:CDS |
ATGAAAATAACATAACTACA+AGG | 0.583583 | 3.2:+64027262 | MS.gene69243:CDS |
GATTCAACTAAGGTTCTCCA+TGG | 0.583612 | 3.2:+64027141 | MS.gene69243:CDS |
TGCTATCATGCTCAAGAGAA+GGG | 0.584011 | 3.2:+64025474 | MS.gene69243:CDS |
CCATTGCGAGTCATACGTAA+AGG | 0.587373 | 3.2:+64027315 | MS.gene69243:CDS |
CCAAATGTTGAGTTTGTGAC+TGG | 0.589129 | 3.2:+64027566 | MS.gene69243:CDS |
TACCAACAGTTGTAGCACCC+AGG | 0.593119 | 3.2:-64027197 | None:intergenic |
TAAGTGTGCGATGAAAGAAA+CGG | 0.601334 | 3.2:+64026327 | MS.gene69243:CDS |
AGGCGTGTCCTTGGAAAAGA+CGG | 0.601540 | 3.2:+64025827 | MS.gene69243:CDS |
AATGTTGAGTTTGTGACTGG+TGG | 0.604793 | 3.2:+64027569 | MS.gene69243:CDS |
ACCAACAGTTGTAGCACCCA+GGG | 0.604803 | 3.2:-64027196 | None:intergenic |
CTGAATTTGAAGAAAAGTGG+TGG | 0.606954 | 3.2:+64026371 | MS.gene69243:CDS |
TAAATTCAGATAATACTCCA+TGG | 0.607260 | 3.2:-64027158 | None:intergenic |
CCTTTACGTATGACTCGCAA+TGG | 0.611052 | 3.2:-64027315 | None:intergenic |
GAAAGGGTTGCTAATCAAAG+TGG | 0.611478 | 3.2:+64027524 | MS.gene69243:CDS |
ATGGATACAATAATTCCTTG+TGG | 0.612516 | 3.2:+64026649 | MS.gene69243:CDS |
CAAGTTTAGAGCCTATAGAA+GGG | 0.613497 | 3.2:+64025330 | MS.gene69243:CDS |
CACTCATGCCAAGTTTAAGG+AGG | 0.615179 | 3.2:+64026711 | MS.gene69243:CDS |
GCAATGGACTGTGAATTTCA+GGG | 0.615590 | 3.2:-64027299 | None:intergenic |
TGAAAATAACATAACTACAA+GGG | 0.618946 | 3.2:+64027263 | MS.gene69243:CDS |
GTCCTTGGAAAAGACGGTGA+TGG | 0.620301 | 3.2:+64025833 | MS.gene69243:CDS |
CAGGTTTGAATTGAACTGCA+AGG | 0.626842 | 3.2:-64027771 | None:intergenic |
ATATCGGAAGTAGATGTCAT+GGG | 0.629746 | 3.2:+64027746 | MS.gene69243:CDS |
CCACCCTCAAAGAATATGGA+GGG | 0.638497 | 3.2:+64026769 | MS.gene69243:CDS |
CCAAATCAATGATGATGCAG+GGG | 0.638714 | 3.2:+64025703 | MS.gene69243:CDS |
CAATTAGCCCTACAAAGTCA+AGG | 0.639470 | 3.2:+64025633 | MS.gene69243:CDS |
TCGCGACAAATTTACAACAA+AGG | 0.652069 | 3.2:+64027413 | MS.gene69243:CDS |
GCCACCCTCAAAGAATATGG+AGG | 0.660945 | 3.2:+64026768 | MS.gene69243:CDS |
ACAGTTGTAGCACCCAGGGA+AGG | 0.661186 | 3.2:-64027192 | None:intergenic |
ATTGACGAGGTTGACCCACA+AGG | 0.662455 | 3.2:-64026664 | None:intergenic |
TCTCTTGTCACAGATGCTGG+AGG | 0.671993 | 3.2:+64025749 | MS.gene69243:CDS |
AAGACACAAACTCATTCGTG+TGG | 0.690456 | 3.2:+64026119 | MS.gene69243:CDS |
GATTTGCAATGGACTCACAG+TGG | 0.691472 | 3.2:-64027232 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATTTATATTTTTTTGAAGT+GGG | + | chr3.2:64027650-64027669 | MS.gene69243:intron | 10.0% |
!!! | TTATTTATATTTTTTTGAAG+TGG | + | chr3.2:64027649-64027668 | MS.gene69243:intron | 10.0% |
!! | AAATATTTCTTCAACATAAT+TGG | - | chr3.2:64026472-64026491 | None:intergenic | 15.0% |
!!! | AAAATATAACATTTTGTGAA+AGG | + | chr3.2:64025777-64025796 | MS.gene69243:CDS | 15.0% |
!!! | AAATATAACATTTTGTGAAA+GGG | + | chr3.2:64025778-64025797 | MS.gene69243:CDS | 15.0% |
!!! | TATGTTGAAGAAATATTTTT+GGG | + | chr3.2:64026474-64026493 | MS.gene69243:CDS | 15.0% |
!!! | TTATGTTGAAGAAATATTTT+TGG | + | chr3.2:64026473-64026492 | MS.gene69243:CDS | 15.0% |
!! | ATGAAAATAACATAACTACA+AGG | + | chr3.2:64027262-64027281 | MS.gene69243:CDS | 20.0% |
!! | TGAAAATAACATAACTACAA+GGG | + | chr3.2:64027263-64027282 | MS.gene69243:CDS | 20.0% |
!! | TGTTAGAAATTATGTTAACA+AGG | + | chr3.2:64025802-64025821 | MS.gene69243:CDS | 20.0% |
!!! | AATATAGTTGATAGCTTTAA+TGG | + | chr3.2:64025299-64025318 | MS.gene69243:CDS | 20.0% |
!!! | ACTTTAAAGATACAATCTTT+TGG | - | chr3.2:64026844-64026863 | None:intergenic | 20.0% |
!!! | TCAAATAGTATAGAACTTTT+TGG | + | chr3.2:64027449-64027468 | MS.gene69243:intron | 20.0% |
!!! | TTATGTTATTTTCATCCATT+TGG | - | chr3.2:64027257-64027276 | None:intergenic | 20.0% |
!!! | TTTCTTTTATGATATAGACT+TGG | + | chr3.2:64025904-64025923 | MS.gene69243:CDS | 20.0% |
! | AAAAATGTCTACAGTTGAAA+AGG | + | chr3.2:64027356-64027375 | MS.gene69243:CDS | 25.0% |
! | GAAATTATGTTAACAAGGAA+AGG | + | chr3.2:64025807-64025826 | MS.gene69243:CDS | 25.0% |
! | GATGGAGCAAAAATATTAAA+AGG | + | chr3.2:64027001-64027020 | MS.gene69243:CDS | 25.0% |
! | TAAATTCAGATAATACTCCA+TGG | - | chr3.2:64027161-64027180 | None:intergenic | 25.0% |
! | TTGGACAAAAATAAATGAGA+TGG | - | chr3.2:64027484-64027503 | None:intergenic | 25.0% |
!! | AAAATTTCTGAAAAGCTAAG+TGG | + | chr3.2:64026283-64026302 | MS.gene69243:CDS | 25.0% |
!! | GATGATGTGAAATCATTTTA+TGG | + | chr3.2:64025371-64025390 | MS.gene69243:CDS | 25.0% |
!!! | AAACTATTTTTGTCGAATGA+GGG | + | chr3.2:64025868-64025887 | MS.gene69243:CDS | 25.0% |
!!! | CATTTTTCATAGCTTTACAT+TGG | - | chr3.2:64026204-64026223 | None:intergenic | 25.0% |
!!! | TAAACTATTTTTGTCGAATG+AGG | + | chr3.2:64025867-64025886 | MS.gene69243:CDS | 25.0% |
!!! | TTAAATATGTTTTAGCACGA+TGG | + | chr3.2:64026983-64027002 | MS.gene69243:CDS | 25.0% |
AACAAAATTGAAGCCACAAA+TGG | + | chr3.2:64027056-64027075 | MS.gene69243:CDS | 30.0% | |
AACTACAAGGGATGAAAATT+TGG | + | chr3.2:64027275-64027294 | MS.gene69243:CDS | 30.0% | |
AAGACTAGATCATCAAAGAA+AGG | + | chr3.2:64025425-64025444 | MS.gene69243:CDS | 30.0% | |
AGAGAATGAAGATTCAACTA+AGG | + | chr3.2:64027131-64027150 | MS.gene69243:CDS | 30.0% | |
ATGGATACAATAATTCCTTG+TGG | + | chr3.2:64026649-64026668 | MS.gene69243:CDS | 30.0% | |
CAACTGAATTTGAAGAAAAG+TGG | + | chr3.2:64026368-64026387 | MS.gene69243:CDS | 30.0% | |
CAATCAACATTATTTGGATG+TGG | + | chr3.2:64026082-64026101 | MS.gene69243:intron | 30.0% | |
CATGGTCAATCAACATTATT+TGG | + | chr3.2:64026076-64026095 | MS.gene69243:intron | 30.0% | |
CGTGCTAAAACATATTTAAC+CGG | - | chr3.2:64026982-64027001 | None:intergenic | 30.0% | |
GTAGGAATTCAACATTGAAA+GGG | + | chr3.2:64027508-64027527 | MS.gene69243:intron | 30.0% | |
GTGTTGGAGGATAAATTATT+TGG | + | chr3.2:64026811-64026830 | MS.gene69243:CDS | 30.0% | |
TGGATACAATAATTCCTTGT+GGG | + | chr3.2:64026650-64026669 | MS.gene69243:CDS | 30.0% | |
TGTAGGAATTCAACATTGAA+AGG | + | chr3.2:64027507-64027526 | MS.gene69243:intron | 30.0% | |
TTGAGCTAGAACATAATGAT+TGG | + | chr3.2:64026410-64026429 | MS.gene69243:CDS | 30.0% | |
! | AAATTTGTCGCGACTTTTAT+TGG | - | chr3.2:64027406-64027425 | None:intergenic | 30.0% |
! | AACATAATGATTGGTTGAGT+GGG | + | chr3.2:64026419-64026438 | MS.gene69243:CDS | 30.0% |
! | ATAATGTTGATTGACCATGA+TGG | - | chr3.2:64026075-64026094 | None:intergenic | 30.0% |
! | CACTTTTCTTCAAATTCAGT+TGG | - | chr3.2:64026370-64026389 | None:intergenic | 30.0% |
! | GGAAAGTATGCTTATGTAAA+GGG | + | chr3.2:64025392-64025411 | MS.gene69243:CDS | 30.0% |
! | GGACAATTTTTCACTTTAGT+TGG | - | chr3.2:64025539-64025558 | None:intergenic | 30.0% |
! | GTAGACATTTTTCTCTTTGA+TGG | - | chr3.2:64027348-64027367 | None:intergenic | 30.0% |
! | TATGCTTATGTAAAGGGTTT+TGG | + | chr3.2:64025398-64025417 | MS.gene69243:CDS | 30.0% |
! | TGGAAAGTATGCTTATGTAA+AGG | + | chr3.2:64025391-64025410 | MS.gene69243:CDS | 30.0% |
! | TTTTTCCTACTACTATACAC+AGG | + | chr3.2:64026236-64026255 | MS.gene69243:intron | 30.0% |
!! | TGAAGCTGATTTTCAATCAA+TGG | + | chr3.2:64026630-64026649 | MS.gene69243:CDS | 30.0% |
!!! | AGTGTCGATAGTAATTTTGA+TGG | + | chr3.2:64025269-64025288 | MS.gene69243:CDS | 30.0% |
!!! | TTATTTTTGTCCAATCGTGT+AGG | + | chr3.2:64027490-64027509 | MS.gene69243:intron | 30.0% |
!!! | TTGAAGAAATATTTTTGGGC+AGG | + | chr3.2:64026478-64026497 | MS.gene69243:CDS | 30.0% |
AATATCGGAAGTAGATGTCA+TGG | + | chr3.2:64027745-64027764 | MS.gene69243:CDS | 35.0% | |
AATCACTACTTACTGTGTGT+TGG | + | chr3.2:64026795-64026814 | MS.gene69243:CDS | 35.0% | |
AGCATACATGCTTTCTTTGA+TGG | + | chr3.2:64026526-64026545 | MS.gene69243:CDS | 35.0% | |
AGTGAAAAATTGTCCTGCTA+AGG | + | chr3.2:64025544-64025563 | MS.gene69243:CDS | 35.0% | |
ATACACTCATGCCAAGTTTA+AGG | + | chr3.2:64026708-64026727 | MS.gene69243:CDS | 35.0% | |
ATATCGGAAGTAGATGTCAT+GGG | + | chr3.2:64027746-64027765 | MS.gene69243:CDS | 35.0% | |
ATGTTGAATTCCTACACGAT+TGG | - | chr3.2:64027503-64027522 | None:intergenic | 35.0% | |
CTGAATTTGAAGAAAAGTGG+TGG | + | chr3.2:64026371-64026390 | MS.gene69243:CDS | 35.0% | |
CTTGTGCAAACATTTCTTTG+AGG | + | chr3.2:64027092-64027111 | MS.gene69243:CDS | 35.0% | |
GAAAAAGTCATCCCTTCTAT+AGG | - | chr3.2:64025344-64025363 | None:intergenic | 35.0% | |
TAAGTGTGCGATGAAAGAAA+CGG | + | chr3.2:64026327-64026346 | MS.gene69243:CDS | 35.0% | |
TACAAAGTCAAGGTTGTTCA+AGG | + | chr3.2:64025643-64025662 | MS.gene69243:CDS | 35.0% | |
TCATCAAAGAAAGGAGATGA+TGG | + | chr3.2:64025434-64025453 | MS.gene69243:CDS | 35.0% | |
TCATCCATTTGGATTTGCAA+TGG | - | chr3.2:64027246-64027265 | None:intergenic | 35.0% | |
TCGCGACAAATTTACAACAA+AGG | + | chr3.2:64027413-64027432 | MS.gene69243:CDS | 35.0% | |
TGAACAACCTTGACTTTGTA+GGG | - | chr3.2:64025643-64025662 | None:intergenic | 35.0% | |
TGGAGGTGATATATCATTCA+CGG | + | chr3.2:64027712-64027731 | MS.gene69243:CDS | 35.0% | |
TTGAACAACCTTGACTTTGT+AGG | - | chr3.2:64025644-64025663 | None:intergenic | 35.0% | |
TTTGTTGGTGTAAACCATCA+TGG | + | chr3.2:64026058-64026077 | MS.gene69243:intron | 35.0% | |
! | AAATCTAATTTGCCTTCCCT+GGG | + | chr3.2:64027180-64027199 | MS.gene69243:CDS | 35.0% |
! | ACTGCTAAGTTGGAAAAAGA+TGG | + | chr3.2:64025569-64025588 | MS.gene69243:CDS | 35.0% |
! | AGAGCTGCATATGAATCTTT+TGG | + | chr3.2:64025974-64025993 | MS.gene69243:intron | 35.0% |
! | AGTAGGAAAAACTGACTCAA+TGG | - | chr3.2:64026227-64026246 | None:intergenic | 35.0% |
! | ATCCAAATCAATGATGATGC+AGG | + | chr3.2:64025701-64025720 | MS.gene69243:CDS | 35.0% |
! | CAAGTTTAGAGCCTATAGAA+GGG | + | chr3.2:64025330-64025349 | MS.gene69243:CDS | 35.0% |
! | CACGGATCTTTTGACAATAT+CGG | + | chr3.2:64027730-64027749 | MS.gene69243:CDS | 35.0% |
! | GAACATAATGATTGGTTGAG+TGG | + | chr3.2:64026418-64026437 | MS.gene69243:CDS | 35.0% |
! | GACATTTTTCTCTTTGATGG+AGG | - | chr3.2:64027345-64027364 | None:intergenic | 35.0% |
! | GGTCAGTGATAATACCTTTT+GGG | - | chr3.2:64026183-64026202 | None:intergenic | 35.0% |
! | GTCAGTGATAATACCTTTTG+GGG | - | chr3.2:64026182-64026201 | None:intergenic | 35.0% |
! | TAAATCTAATTTGCCTTCCC+TGG | + | chr3.2:64027179-64027198 | MS.gene69243:CDS | 35.0% |
! | TCATGTACGAAACGTCTTTT+GGG | + | chr3.2:64025937-64025956 | MS.gene69243:intron | 35.0% |
! | TCCAAATCAATGATGATGCA+GGG | + | chr3.2:64025702-64025721 | MS.gene69243:CDS | 35.0% |
! | TGGTCAGTGATAATACCTTT+TGG | - | chr3.2:64026184-64026203 | None:intergenic | 35.0% |
! | TTCATGTACGAAACGTCTTT+TGG | + | chr3.2:64025936-64025955 | MS.gene69243:intron | 35.0% |
!! | AGGGATGACTTTTTCTTCTA+TGG | + | chr3.2:64025349-64025368 | MS.gene69243:CDS | 35.0% |
!! | AGTTGGAAAAAGATGGATTG+TGG | + | chr3.2:64025576-64025595 | MS.gene69243:CDS | 35.0% |
!! | ATACAAGGAGCGTCATAAAT+GGG | + | chr3.2:64026444-64026463 | MS.gene69243:CDS | 35.0% |
!! | GAACTGTTTTTCAATTGACG+AGG | - | chr3.2:64026680-64026699 | None:intergenic | 35.0% |
!! | GTTTTGATGTTGTGTGTTGA+TGG | + | chr3.2:64027677-64027696 | MS.gene69243:intron | 35.0% |
!! | TATACAAGGAGCGTCATAAA+TGG | + | chr3.2:64026443-64026462 | MS.gene69243:CDS | 35.0% |
!! | TGCTCTAGAAAGGGTTAAAA+GGG | + | chr3.2:64026954-64026973 | MS.gene69243:CDS | 35.0% |
!!! | CTTATGTAAAGGGTTTTGGA+TGG | + | chr3.2:64025402-64025421 | MS.gene69243:CDS | 35.0% |
AACTTAGCAGTAACCTTAGC+AGG | - | chr3.2:64025560-64025579 | None:intergenic | 40.0% | |
AAGACACAAACTCATTCGTG+TGG | + | chr3.2:64026119-64026138 | MS.gene69243:CDS | 40.0% | |
AATGTTGAGTTTGTGACTGG+TGG | + | chr3.2:64027569-64027588 | MS.gene69243:CDS | 40.0% | |
ACACCAACAAATGCAGCAAA+AGG | - | chr3.2:64026049-64026068 | None:intergenic | 40.0% | |
AGAAAGGGTTAAAAGGGTTC+CGG | + | chr3.2:64026960-64026979 | MS.gene69243:CDS | 40.0% | |
ATGCTATCATGCTCAAGAGA+AGG | + | chr3.2:64025473-64025492 | MS.gene69243:CDS | 40.0% | |
ATGTTAGGAAAAGCCCCAAA+AGG | + | chr3.2:64026166-64026185 | MS.gene69243:CDS | 40.0% | |
ATTGTTTGATGCAAGTCCCA+TGG | + | chr3.2:64027595-64027614 | MS.gene69243:CDS | 40.0% | |
CAATTAGCCCTACAAAGTCA+AGG | + | chr3.2:64025633-64025652 | MS.gene69243:CDS | 40.0% | |
CAGGTTTGAATTGAACTGCA+AGG | - | chr3.2:64027774-64027793 | None:intergenic | 40.0% | |
CCAAATGTTGAGTTTGTGAC+TGG | + | chr3.2:64027566-64027585 | MS.gene69243:CDS | 40.0% | |
CCAGTCACAAACTCAACATT+TGG | - | chr3.2:64027569-64027588 | None:intergenic | 40.0% | |
CTGTCAAATCTGTCCATTTG+TGG | - | chr3.2:64027072-64027091 | None:intergenic | 40.0% | |
GAAAGGGTTGCTAATCAAAG+TGG | + | chr3.2:64027524-64027543 | MS.gene69243:CDS | 40.0% | |
GAGTCCATTGCAAATCCAAA+TGG | + | chr3.2:64027239-64027258 | MS.gene69243:CDS | 40.0% | |
GATTCAACTAAGGTTCTCCA+TGG | + | chr3.2:64027141-64027160 | MS.gene69243:CDS | 40.0% | |
TAGGGCTAATTGCATGAGAA+TGG | - | chr3.2:64025625-64025644 | None:intergenic | 40.0% | |
TCACCCTCCATATTCTTTGA+GGG | - | chr3.2:64026775-64026794 | None:intergenic | 40.0% | |
TCTCAGAAGTAGAGCAGAAA+AGG | + | chr3.2:64026603-64026622 | MS.gene69243:CDS | 40.0% | |
TCTTGGCTTCGTTGTATGTT+AGG | + | chr3.2:64026151-64026170 | MS.gene69243:CDS | 40.0% | |
TGCTAAGGTTACTGCTAAGT+TGG | + | chr3.2:64025559-64025578 | MS.gene69243:CDS | 40.0% | |
TGCTATCATGCTCAAGAGAA+GGG | + | chr3.2:64025474-64025493 | MS.gene69243:CDS | 40.0% | |
TGGATGTGGTCTACTTTCTA+GGG | + | chr3.2:64026096-64026115 | MS.gene69243:intron | 40.0% | |
TGGCATGAGTGTATTCTTCT+TGG | - | chr3.2:64026702-64026721 | None:intergenic | 40.0% | |
TTCACCCTCCATATTCTTTG+AGG | - | chr3.2:64026776-64026795 | None:intergenic | 40.0% | |
TTCCTACTACTATACACAGG+TGG | + | chr3.2:64026239-64026258 | MS.gene69243:intron | 40.0% | |
TTGGATGTGGTCTACTTTCT+AGG | + | chr3.2:64026095-64026114 | MS.gene69243:intron | 40.0% | |
TTGTGATTCGCACAAACCAT+GGG | - | chr3.2:64027614-64027633 | None:intergenic | 40.0% | |
! | ATGCCTTTTGCTGCATTTGT+TGG | + | chr3.2:64026043-64026062 | MS.gene69243:intron | 40.0% |
! | CCAAATCAATGATGATGCAG+GGG | + | chr3.2:64025703-64025722 | MS.gene69243:CDS | 40.0% |
! | GCAAGTTTAGAGCCTATAGA+AGG | + | chr3.2:64025329-64025348 | MS.gene69243:CDS | 40.0% |
! | TGCTCATTGTTTGAGTTCAG+AGG | + | chr3.2:64026901-64026920 | MS.gene69243:CDS | 40.0% |
!! | GCAATGGACTGTGAATTTCA+GGG | - | chr3.2:64027302-64027321 | None:intergenic | 40.0% |
!! | GTGCTCTAGAAAGGGTTAAA+AGG | + | chr3.2:64026953-64026972 | MS.gene69243:CDS | 40.0% |
!! | GTGTGTTTGTGCTCTAGAAA+GGG | + | chr3.2:64026945-64026964 | MS.gene69243:CDS | 40.0% |
!! | TGTGTGTTTGTGCTCTAGAA+AGG | + | chr3.2:64026944-64026963 | MS.gene69243:CDS | 40.0% |
!! | TTGGTTGAGTGGGTTATACA+AGG | + | chr3.2:64026429-64026448 | MS.gene69243:CDS | 40.0% |
!!! | TCGTGTGGCTTTTTCAATCT+TGG | + | chr3.2:64026134-64026153 | MS.gene69243:CDS | 40.0% |
CAATCTCTTGTCACAGATGC+TGG | + | chr3.2:64025746-64025765 | MS.gene69243:CDS | 45.0% | |
CACCACCTGTGTATAGTAGT+AGG | - | chr3.2:64026244-64026263 | None:intergenic | 45.0% | |
CACTACTTACTGTGTGTTGG+AGG | + | chr3.2:64026798-64026817 | MS.gene69243:CDS | 45.0% | |
CACTCATGCCAAGTTTAAGG+AGG | + | chr3.2:64026711-64026730 | MS.gene69243:CDS | 45.0% | |
CAGCATCTGTGACAAGAGAT+TGG | - | chr3.2:64025748-64025767 | None:intergenic | 45.0% | |
CCACCCTCAAAGAATATGGA+GGG | + | chr3.2:64026769-64026788 | MS.gene69243:CDS | 45.0% | |
CCATTGCGAGTCATACGTAA+AGG | + | chr3.2:64027315-64027334 | MS.gene69243:CDS | 45.0% | |
CCTTTACGTATGACTCGCAA+TGG | - | chr3.2:64027318-64027337 | None:intergenic | 45.0% | |
CTATACACAGGTGGTGTTTG+TGG | + | chr3.2:64026248-64026267 | MS.gene69243:intron | 45.0% | |
CTTGTGATTCGCACAAACCA+TGG | - | chr3.2:64027615-64027634 | None:intergenic | 45.0% | |
TGCCAAGTTTAAGGAGGTTC+AGG | + | chr3.2:64026717-64026736 | MS.gene69243:CDS | 45.0% | |
TGCCTGAACCTCCTTAAACT+TGG | - | chr3.2:64026722-64026741 | None:intergenic | 45.0% | |
TGTGCCACCCTCAAAGAATA+TGG | + | chr3.2:64026765-64026784 | MS.gene69243:CDS | 45.0% | |
! | CCCCTGCATCATCATTGATT+TGG | - | chr3.2:64025706-64025725 | None:intergenic | 45.0% |
! | GATTTGCAATGGACTCACAG+TGG | - | chr3.2:64027235-64027254 | None:intergenic | 45.0% |
! | TACCATCACCGTCTTTTCCA+AGG | - | chr3.2:64025838-64025857 | None:intergenic | 45.0% |
!! | CGCAATGGACTGTGAATTTC+AGG | - | chr3.2:64027303-64027322 | None:intergenic | 45.0% |
!! | GGAAGTGTCTTCAGTGTACA+AGG | - | chr3.2:64025518-64025537 | None:intergenic | 45.0% |
!! | GTGTGTTGATGGTCTTGTAC+AGG | + | chr3.2:64027688-64027707 | MS.gene69243:intron | 45.0% |
!! | GTTGATGGTCTTGTACAGGT+TGG | + | chr3.2:64027692-64027711 | MS.gene69243:intron | 45.0% |
AAAAGGCCGTGCAAAAACGC+AGG | + | chr3.2:64027373-64027392 | MS.gene69243:CDS | 50.0% | |
ACCAACAGTTGTAGCACCCA+GGG | - | chr3.2:64027199-64027218 | None:intergenic | 50.0% | |
AGGCGTGTCCTTGGAAAAGA+CGG | + | chr3.2:64025827-64025846 | MS.gene69243:CDS | 50.0% | |
ATTGACGAGGTTGACCCACA+AGG | - | chr3.2:64026667-64026686 | None:intergenic | 50.0% | |
GCCACCCTCAAAGAATATGG+AGG | + | chr3.2:64026768-64026787 | MS.gene69243:CDS | 50.0% | |
GTCCTTGGAAAAGACGGTGA+TGG | + | chr3.2:64025833-64025852 | MS.gene69243:CDS | 50.0% | |
TACCAACAGTTGTAGCACCC+AGG | - | chr3.2:64027200-64027219 | None:intergenic | 50.0% | |
TCTCTTGTCACAGATGCTGG+AGG | + | chr3.2:64025749-64025768 | MS.gene69243:CDS | 50.0% | |
! | AACAAGGAAAGGCGTGTCCT+TGG | + | chr3.2:64025818-64025837 | MS.gene69243:CDS | 50.0% |
! | CCCTCCATATTCTTTGAGGG+TGG | - | chr3.2:64026772-64026791 | None:intergenic | 50.0% |
! | TCAATGATGATGCAGGGGTG+AGG | + | chr3.2:64025708-64025727 | MS.gene69243:CDS | 50.0% |
! | TCGCTTCCTGCGTTTTTGCA+CGG | - | chr3.2:64027382-64027401 | None:intergenic | 50.0% |
!! | GATGGTCTTGTACAGGTTGG+AGG | + | chr3.2:64027695-64027714 | MS.gene69243:intron | 50.0% |
ACAGTTGTAGCACCCAGGGA+AGG | - | chr3.2:64027195-64027214 | None:intergenic | 55.0% | |
! | TCCCTGGGTGCTACAACTGT+TGG | + | chr3.2:64027195-64027214 | MS.gene69243:CDS | 55.0% |
!! | AAGAGAAGGGCGTCGTGTCT+CGG | + | chr3.2:64025487-64025506 | MS.gene69243:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 64025245 | 64027796 | 64025245 | ID=MS.gene69243 |
chr3.2 | mRNA | 64025245 | 64027796 | 64025245 | ID=MS.gene69243.t1;Parent=MS.gene69243 |
chr3.2 | exon | 64025245 | 64025940 | 64025245 | ID=MS.gene69243.t1.exon1;Parent=MS.gene69243.t1 |
chr3.2 | CDS | 64025245 | 64025940 | 64025245 | ID=cds.MS.gene69243.t1;Parent=MS.gene69243.t1 |
chr3.2 | exon | 64026117 | 64026187 | 64026117 | ID=MS.gene69243.t1.exon2;Parent=MS.gene69243.t1 |
chr3.2 | CDS | 64026117 | 64026187 | 64026117 | ID=cds.MS.gene69243.t1;Parent=MS.gene69243.t1 |
chr3.2 | exon | 64026258 | 64027455 | 64026258 | ID=MS.gene69243.t1.exon3;Parent=MS.gene69243.t1 |
chr3.2 | CDS | 64026258 | 64027455 | 64026258 | ID=cds.MS.gene69243.t1;Parent=MS.gene69243.t1 |
chr3.2 | exon | 64027512 | 64027616 | 64027512 | ID=MS.gene69243.t1.exon4;Parent=MS.gene69243.t1 |
chr3.2 | CDS | 64027512 | 64027616 | 64027512 | ID=cds.MS.gene69243.t1;Parent=MS.gene69243.t1 |
chr3.2 | exon | 64027710 | 64027796 | 64027710 | ID=MS.gene69243.t1.exon5;Parent=MS.gene69243.t1 |
chr3.2 | CDS | 64027710 | 64027796 | 64027710 | ID=cds.MS.gene69243.t1;Parent=MS.gene69243.t1 |
Gene Sequence |
Protein sequence |