Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69436.t1 | XP_003603724.1 | 88.2 | 238 | 13 | 5 | 1 | 237 | 1 | 224 | 5.60E-115 | 423.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69436.t1 | Q9LQZ7 | 37.0 | 324 | 112 | 9 | 1 | 236 | 1 | 320 | 1.5e-44 | 181.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69436.t1 | G7J4N4 | 88.2 | 238 | 13 | 5 | 1 | 237 | 1 | 224 | 4.0e-115 | 423.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene69436.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69436.t1 | MTR_3g113070 | 88.235 | 238 | 13 | 5 | 1 | 237 | 1 | 224 | 5.68e-149 | 414 |
| MS.gene69436.t1 | MTR_1g023260 | 47.670 | 279 | 82 | 12 | 1 | 233 | 1 | 261 | 1.34e-65 | 204 |
| MS.gene69436.t1 | MTR_1g023260 | 56.354 | 181 | 45 | 5 | 1 | 150 | 1 | 178 | 8.10e-61 | 189 |
| MS.gene69436.t1 | MTR_3g117320 | 48.039 | 204 | 57 | 5 | 1 | 159 | 1 | 200 | 2.31e-56 | 179 |
| MS.gene69436.t1 | MTR_4g071200 | 41.176 | 204 | 83 | 4 | 1 | 170 | 1 | 201 | 1.11e-49 | 162 |
| MS.gene69436.t1 | MTR_2g073370 | 53.271 | 107 | 47 | 1 | 1 | 107 | 1 | 104 | 6.01e-35 | 126 |
| MS.gene69436.t1 | MTR_2g099010 | 33.621 | 232 | 124 | 5 | 1 | 216 | 1 | 218 | 6.19e-35 | 125 |
| MS.gene69436.t1 | MTR_2g099010 | 34.483 | 232 | 121 | 5 | 1 | 216 | 1 | 217 | 4.59e-34 | 122 |
| MS.gene69436.t1 | MTR_4g067320 | 51.402 | 107 | 49 | 1 | 1 | 107 | 1 | 104 | 1.75e-31 | 115 |
| MS.gene69436.t1 | MTR_4g067320 | 51.402 | 107 | 49 | 1 | 1 | 107 | 1 | 104 | 1.89e-31 | 115 |
| MS.gene69436.t1 | MTR_1g023260 | 39.149 | 235 | 74 | 13 | 45 | 233 | 42 | 253 | 4.05e-28 | 107 |
| MS.gene69436.t1 | MTR_5g021580 | 40.351 | 114 | 62 | 2 | 1 | 114 | 1 | 108 | 9.75e-22 | 89.0 |
| MS.gene69436.t1 | MTR_5g021580 | 40.351 | 114 | 62 | 2 | 1 | 114 | 1 | 108 | 1.32e-21 | 89.0 |
| MS.gene69436.t1 | MTR_1g013450 | 33.113 | 151 | 84 | 2 | 5 | 150 | 6 | 144 | 9.48e-16 | 75.5 |
| MS.gene69436.t1 | MTR_3g105710 | 37.895 | 95 | 47 | 1 | 5 | 99 | 6 | 88 | 2.75e-13 | 68.2 |
| MS.gene69436.t1 | MTR_4g128930 | 35.789 | 95 | 49 | 1 | 5 | 99 | 22 | 104 | 1.12e-12 | 67.0 |
| MS.gene69436.t1 | MTR_7g018170 | 30.000 | 120 | 72 | 1 | 5 | 124 | 26 | 133 | 1.62e-12 | 66.6 |
| MS.gene69436.t1 | MTR_5g069480 | 30.303 | 99 | 57 | 1 | 1 | 99 | 1 | 87 | 3.55e-11 | 62.0 |
| MS.gene69436.t1 | MTR_5g069480 | 30.303 | 99 | 57 | 1 | 1 | 99 | 1 | 87 | 6.00e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69436.t1 | AT1G75540 | 38.272 | 324 | 108 | 9 | 1 | 236 | 1 | 320 | 3.41e-58 | 187 |
| MS.gene69436.t1 | AT4G39070 | 43.478 | 207 | 57 | 3 | 1 | 149 | 1 | 205 | 5.10e-47 | 156 |
| MS.gene69436.t1 | AT1G78600 | 52.336 | 107 | 48 | 1 | 1 | 107 | 1 | 104 | 7.41e-35 | 126 |
| MS.gene69436.t1 | AT1G06040 | 53.271 | 107 | 47 | 1 | 1 | 107 | 1 | 104 | 1.05e-34 | 122 |
| MS.gene69436.t1 | AT1G78600 | 52.336 | 107 | 48 | 1 | 1 | 107 | 1 | 104 | 1.42e-34 | 126 |
| MS.gene69436.t1 | AT2G31380 | 53.271 | 107 | 47 | 1 | 1 | 107 | 1 | 104 | 5.11e-34 | 122 |
| MS.gene69436.t1 | AT1G06040 | 53.271 | 107 | 47 | 1 | 1 | 107 | 1 | 104 | 1.02e-33 | 122 |
| MS.gene69436.t1 | AT4G10240 | 41.912 | 136 | 70 | 3 | 1 | 133 | 1 | 130 | 1.08e-29 | 109 |
| MS.gene69436.t1 | AT4G38960 | 42.105 | 114 | 60 | 2 | 1 | 114 | 1 | 108 | 3.15e-23 | 93.2 |
| MS.gene69436.t1 | AT4G38960 | 42.105 | 114 | 60 | 2 | 1 | 114 | 1 | 108 | 3.15e-23 | 93.2 |
| MS.gene69436.t1 | AT2G21320 | 42.105 | 114 | 60 | 2 | 1 | 114 | 1 | 108 | 6.17e-23 | 92.0 |
| MS.gene69436.t1 | AT2G24790 | 38.947 | 95 | 46 | 1 | 5 | 99 | 8 | 90 | 2.04e-15 | 73.2 |
| MS.gene69436.t1 | AT4G38960 | 30.573 | 157 | 60 | 3 | 1 | 114 | 1 | 151 | 2.78e-15 | 72.8 |
| MS.gene69436.t1 | AT2G24790 | 38.947 | 95 | 46 | 1 | 5 | 99 | 8 | 90 | 6.93e-15 | 72.8 |
| MS.gene69436.t1 | AT5G15850 | 34.862 | 109 | 57 | 2 | 5 | 112 | 12 | 107 | 6.33e-14 | 70.5 |
| MS.gene69436.t1 | AT3G02380 | 32.743 | 113 | 62 | 2 | 5 | 116 | 16 | 115 | 7.90e-14 | 70.1 |
| MS.gene69436.t1 | AT5G24930 | 36.842 | 95 | 48 | 1 | 5 | 99 | 6 | 88 | 1.16e-13 | 69.7 |
| MS.gene69436.t1 | AT5G15840 | 29.839 | 124 | 75 | 1 | 5 | 128 | 20 | 131 | 9.31e-13 | 66.6 |
| MS.gene69436.t1 | AT5G15840 | 29.839 | 124 | 75 | 1 | 5 | 128 | 20 | 131 | 1.72e-12 | 66.2 |
| MS.gene69436.t1 | AT1G28050 | 38.462 | 104 | 52 | 3 | 2 | 105 | 6 | 97 | 1.91e-12 | 66.6 |
| MS.gene69436.t1 | AT2G33500 | 34.951 | 103 | 55 | 1 | 3 | 105 | 10 | 100 | 3.94e-12 | 65.5 |
| MS.gene69436.t1 | AT2G33500 | 34.951 | 103 | 55 | 1 | 3 | 105 | 10 | 100 | 3.98e-12 | 65.5 |
Find 64 sgRNAs with CRISPR-Local
Find 66 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAGATGTGGCAATGTTAAT+TGG | 0.169105 | 3.3:-92894578 | None:intergenic |
| AAATGGTTGGGAGAATTATT+AGG | 0.172908 | 3.3:-92893853 | None:intergenic |
| AAGAAACCTATTATGCTTCT+TGG | 0.240931 | 3.3:-92894152 | None:intergenic |
| ACCAATTTCAGCAGCAGTTT+GGG | 0.246710 | 3.3:+92894523 | MS.gene69436:CDS |
| CCCCAAACTGCTGCTGAAAT+TGG | 0.248979 | 3.3:-92894524 | None:intergenic |
| CACCAATTTCAGCAGCAGTT+TGG | 0.303898 | 3.3:+92894522 | MS.gene69436:CDS |
| TATTCATGAGGAAAACATTC+TGG | 0.307233 | 3.3:+92894399 | MS.gene69436:CDS |
| AACACACCAAGAAGCATAAT+AGG | 0.390006 | 3.3:+92894146 | MS.gene69436:CDS |
| CATAATAGGTTTCTTCTAAG+TGG | 0.399657 | 3.3:+92894160 | MS.gene69436:CDS |
| GAGAGAGAAGCGCCGGTGTT+TGG | 0.406481 | 3.3:-92893824 | None:intergenic |
| AAGATGTGGCAATGTTAATT+GGG | 0.407815 | 3.3:-92894577 | None:intergenic |
| TCAGAGAGAGGGAAATGGTT+GGG | 0.423810 | 3.3:-92893865 | None:intergenic |
| GAGTGTGATTTGAAGATTCA+TGG | 0.427331 | 3.3:+92894115 | MS.gene69436:CDS |
| CTACAACAGCAGAATCATAT+TGG | 0.434122 | 3.3:+92894331 | MS.gene69436:CDS |
| AATGGTTGGGAGAATTATTA+GGG | 0.446787 | 3.3:-92893852 | None:intergenic |
| TCATGAGAGGGAACAGAAGA+AGG | 0.454520 | 3.3:-92894307 | None:intergenic |
| GTGGTCGCAGGTGGAGCATA+AGG | 0.456556 | 3.3:-92893773 | None:intergenic |
| ACAGTTGGAGGAGGAGAAGC+AGG | 0.467510 | 3.3:-92894199 | None:intergenic |
| ATAATAGGTTTCTTCTAAGT+GGG | 0.482873 | 3.3:+92894161 | MS.gene69436:CDS |
| TTCTCTAGCGAGAGCATGTG+TGG | 0.496184 | 3.3:+92894427 | MS.gene69436:CDS |
| GGAGTTTCTTCATGAACAGT+TGG | 0.498814 | 3.3:-92894214 | None:intergenic |
| AGAGAAGCGCCGGTGTTTGG+AGG | 0.498896 | 3.3:-92893821 | None:intergenic |
| GAACAGAAGAAGGGGAGTCA+AGG | 0.507606 | 3.3:-92894297 | None:intergenic |
| ATCAGAGAGAGGGAAATGGT+TGG | 0.514446 | 3.3:-92893866 | None:intergenic |
| ATGGTGGACACGGTGGTCGC+AGG | 0.523492 | 3.3:-92893785 | None:intergenic |
| CAAACTGCTGCTGAAATTGG+TGG | 0.525028 | 3.3:-92894521 | None:intergenic |
| AAATATCAGAGAGAGGGAAA+TGG | 0.531067 | 3.3:-92893870 | None:intergenic |
| GTGGACACGGTGGTCGCAGG+TGG | 0.531543 | 3.3:-92893782 | None:intergenic |
| CAGCAGAATCATATTGGTAA+AGG | 0.531622 | 3.3:+92894337 | MS.gene69436:CDS |
| AAATCTTCAAACTTCCAACC+TGG | 0.533797 | 3.3:-92894274 | None:intergenic |
| GGTTGGGAGAATTATTAGGG+TGG | 0.538692 | 3.3:-92893849 | None:intergenic |
| TGGAGGCGAGTTTGTTAGCA+TGG | 0.539793 | 3.3:-92893804 | None:intergenic |
| GTTTCTTCATGAACAGTTGG+AGG | 0.542162 | 3.3:-92894211 | None:intergenic |
| TGTGGCAATGTTAATTGGGA+GGG | 0.543395 | 3.3:-92894573 | None:intergenic |
| CATGAGAGGGAACAGAAGAA+GGG | 0.544618 | 3.3:-92894306 | None:intergenic |
| TCTTCATGAACAGTTGGAGG+AGG | 0.551533 | 3.3:-92894208 | None:intergenic |
| TGCTGTTGTAGTTCATGAGA+GGG | 0.552947 | 3.3:-92894319 | None:intergenic |
| GTTTGTTAGCATGGTGGACA+CGG | 0.562165 | 3.3:-92893795 | None:intergenic |
| CTGCTGTTGTAGTTCATGAG+AGG | 0.569968 | 3.3:-92894320 | None:intergenic |
| GCATAAGGCGGCTTCATCCG+CGG | 0.570214 | 3.3:-92893758 | None:intergenic |
| CTATGTTTGTAGGAAAGAAG+AGG | 0.575915 | 3.3:+92894052 | MS.gene69436:intron |
| AGTGCGACATCTGTAACAAA+CGG | 0.576581 | 3.3:+92893716 | MS.gene69436:CDS |
| TACTTGATAAACACTATCCC+AGG | 0.579028 | 3.3:+92894256 | MS.gene69436:CDS |
| CCAATTTCAGCAGCAGTTTG+GGG | 0.580053 | 3.3:+92894524 | MS.gene69436:CDS |
| AATCTTCAAACTTCCAACCT+GGG | 0.582408 | 3.3:-92894273 | None:intergenic |
| GAATAATACAGTGGTGCTTG+AGG | 0.582637 | 3.3:-92894460 | None:intergenic |
| TTGGGAGGGATTGTTATCTG+TGG | 0.583370 | 3.3:-92894559 | None:intergenic |
| ATGAGAGGGAACAGAAGAAG+GGG | 0.584490 | 3.3:-92894305 | None:intergenic |
| CGACATCTGTAACAAACGGC+AGG | 0.587499 | 3.3:+92893720 | MS.gene69436:CDS |
| TACTCAGATATAGTAAAACT+AGG | 0.594122 | 3.3:-92894235 | None:intergenic |
| GTTTGTTACAGATGTCGCAC+TGG | 0.600679 | 3.3:-92893714 | None:intergenic |
| TCTCTAGCGAGAGCATGTGT+GGG | 0.602430 | 3.3:+92894428 | MS.gene69436:CDS |
| ATGTGGCAATGTTAATTGGG+AGG | 0.602797 | 3.3:-92894574 | None:intergenic |
| GGTGGTTGAGAGAGAAGCGC+CGG | 0.603996 | 3.3:-92893831 | None:intergenic |
| CGAGGCAAATATCAGAGAGA+GGG | 0.604337 | 3.3:-92893876 | None:intergenic |
| GTCGCAGGTGGAGCATAAGG+CGG | 0.608572 | 3.3:-92893770 | None:intergenic |
| ACGAGGCAAATATCAGAGAG+AGG | 0.619991 | 3.3:-92893877 | None:intergenic |
| CAATTTCAGCAGCAGTTTGG+GGG | 0.628510 | 3.3:+92894525 | MS.gene69436:CDS |
| TGATAAACACTATCCCAGGT+TGG | 0.630031 | 3.3:+92894260 | MS.gene69436:CDS |
| ACAAACTCGCCTCCAAACAC+CGG | 0.644751 | 3.3:+92893812 | MS.gene69436:CDS |
| TGTTAATTATCATATTCATG+AGG | 0.653612 | 3.3:+92894387 | MS.gene69436:CDS |
| AGGCGAGTTTGTTAGCATGG+TGG | 0.655308 | 3.3:-92893801 | None:intergenic |
| TGTTAGCATGGTGGACACGG+TGG | 0.691209 | 3.3:-92893792 | None:intergenic |
| GGCTTCTTTATTCTGCACCG+CGG | 0.708284 | 3.3:+92893741 | MS.gene69436:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACATAAAAGAATGAATAT+TGG | - | chr3.3:92893911-92893930 | None:intergenic | 15.0% |
| !! | TGTTAATTATCATATTCATG+AGG | + | chr3.3:92894387-92894406 | MS.gene69436:CDS | 20.0% |
| !!! | ACTGTATTATTCTGAAAAAA+TGG | + | chr3.3:92894471-92894490 | MS.gene69436:CDS | 20.0% |
| !!! | ATTTTTTCAGAATAATACAG+TGG | - | chr3.3:92894472-92894491 | None:intergenic | 20.0% |
| ! | ATAATAGGTTTCTTCTAAGT+GGG | + | chr3.3:92894161-92894180 | MS.gene69436:CDS | 25.0% |
| ! | TACTCAGATATAGTAAAACT+AGG | - | chr3.3:92894238-92894257 | None:intergenic | 25.0% |
| AAATGGTTGGGAGAATTATT+AGG | - | chr3.3:92893856-92893875 | None:intergenic | 30.0% | |
| AAGAAACCTATTATGCTTCT+TGG | - | chr3.3:92894155-92894174 | None:intergenic | 30.0% | |
| AATGGTTGGGAGAATTATTA+GGG | - | chr3.3:92893855-92893874 | None:intergenic | 30.0% | |
| CATAATAGGTTTCTTCTAAG+TGG | + | chr3.3:92894160-92894179 | MS.gene69436:CDS | 30.0% | |
| TATTCATGAGGAAAACATTC+TGG | + | chr3.3:92894399-92894418 | MS.gene69436:CDS | 30.0% | |
| !! | GAGTTTGTTTCTATGTTTGT+AGG | + | chr3.3:92894042-92894061 | MS.gene69436:intron | 30.0% |
| !!! | AAGAGGTTTTGTTTTTTGTC+AGG | + | chr3.3:92894069-92894088 | MS.gene69436:CDS | 30.0% |
| AAATATCAGAGAGAGGGAAA+TGG | - | chr3.3:92893873-92893892 | None:intergenic | 35.0% | |
| AAATCTTCAAACTTCCAACC+TGG | - | chr3.3:92894277-92894296 | None:intergenic | 35.0% | |
| AATCTTCAAACTTCCAACCT+GGG | - | chr3.3:92894276-92894295 | None:intergenic | 35.0% | |
| CAGCAGAATCATATTGGTAA+AGG | + | chr3.3:92894337-92894356 | MS.gene69436:CDS | 35.0% | |
| CTACAACAGCAGAATCATAT+TGG | + | chr3.3:92894331-92894350 | MS.gene69436:CDS | 35.0% | |
| CTATGTTTGTAGGAAAGAAG+AGG | + | chr3.3:92894052-92894071 | MS.gene69436:intron | 35.0% | |
| GAATATTGGAGAGAATTACG+AGG | - | chr3.3:92893897-92893916 | None:intergenic | 35.0% | |
| GAGTGTGATTTGAAGATTCA+TGG | + | chr3.3:92894115-92894134 | MS.gene69436:CDS | 35.0% | |
| TACTTGATAAACACTATCCC+AGG | + | chr3.3:92894256-92894275 | MS.gene69436:CDS | 35.0% | |
| ! | AACACACCAAGAAGCATAAT+AGG | + | chr3.3:92894146-92894165 | MS.gene69436:CDS | 35.0% |
| ACCAATTTCAGCAGCAGTTT+GGG | + | chr3.3:92894523-92894542 | MS.gene69436:CDS | 40.0% | |
| AGTGCGACATCTGTAACAAA+CGG | + | chr3.3:92893716-92893735 | MS.gene69436:CDS | 40.0% | |
| GAATAATACAGTGGTGCTTG+AGG | - | chr3.3:92894463-92894482 | None:intergenic | 40.0% | |
| GGAGTTTCTTCATGAACAGT+TGG | - | chr3.3:92894217-92894236 | None:intergenic | 40.0% | |
| GTTTCTTCATGAACAGTTGG+AGG | - | chr3.3:92894214-92894233 | None:intergenic | 40.0% | |
| TGATAAACACTATCCCAGGT+TGG | + | chr3.3:92894260-92894279 | MS.gene69436:CDS | 40.0% | |
| TGCTGTTGTAGTTCATGAGA+GGG | - | chr3.3:92894322-92894341 | None:intergenic | 40.0% | |
| ACGAGGCAAATATCAGAGAG+AGG | - | chr3.3:92893880-92893899 | None:intergenic | 45.0% | |
| ATCAGAGAGAGGGAAATGGT+TGG | - | chr3.3:92893869-92893888 | None:intergenic | 45.0% | |
| ATGAGAGGGAACAGAAGAAG+GGG | - | chr3.3:92894308-92894327 | None:intergenic | 45.0% | |
| CAAACTGCTGCTGAAATTGG+TGG | - | chr3.3:92894524-92894543 | None:intergenic | 45.0% | |
| CAATTTCAGCAGCAGTTTGG+GGG | + | chr3.3:92894525-92894544 | MS.gene69436:CDS | 45.0% | |
| CACCAATTTCAGCAGCAGTT+TGG | + | chr3.3:92894522-92894541 | MS.gene69436:CDS | 45.0% | |
| CATGAGAGGGAACAGAAGAA+GGG | - | chr3.3:92894309-92894328 | None:intergenic | 45.0% | |
| CCAATTTCAGCAGCAGTTTG+GGG | + | chr3.3:92894524-92894543 | MS.gene69436:CDS | 45.0% | |
| CGAGGCAAATATCAGAGAGA+GGG | - | chr3.3:92893879-92893898 | None:intergenic | 45.0% | |
| CTGCTGTTGTAGTTCATGAG+AGG | - | chr3.3:92894323-92894342 | None:intergenic | 45.0% | |
| GGTTGGGAGAATTATTAGGG+TGG | - | chr3.3:92893852-92893871 | None:intergenic | 45.0% | |
| TCAGAGAGAGGGAAATGGTT+GGG | - | chr3.3:92893868-92893887 | None:intergenic | 45.0% | |
| TCATGAGAGGGAACAGAAGA+AGG | - | chr3.3:92894310-92894329 | None:intergenic | 45.0% | |
| TCTTCATGAACAGTTGGAGG+AGG | - | chr3.3:92894211-92894230 | None:intergenic | 45.0% | |
| TTGGGAGGGATTGTTATCTG+TGG | - | chr3.3:92894562-92894581 | None:intergenic | 45.0% | |
| ! | GTTTGTTACAGATGTCGCAC+TGG | - | chr3.3:92893717-92893736 | None:intergenic | 45.0% |
| !! | GTTTGTTAGCATGGTGGACA+CGG | - | chr3.3:92893798-92893817 | None:intergenic | 45.0% |
| ACAAACTCGCCTCCAAACAC+CGG | + | chr3.3:92893812-92893831 | MS.gene69436:CDS | 50.0% | |
| CCCCAAACTGCTGCTGAAAT+TGG | - | chr3.3:92894527-92894546 | None:intergenic | 50.0% | |
| CGACATCTGTAACAAACGGC+AGG | + | chr3.3:92893720-92893739 | MS.gene69436:CDS | 50.0% | |
| GAACAGAAGAAGGGGAGTCA+AGG | - | chr3.3:92894300-92894319 | None:intergenic | 50.0% | |
| GGCTTCTTTATTCTGCACCG+CGG | + | chr3.3:92893741-92893760 | MS.gene69436:CDS | 50.0% | |
| ! | TCTCTAGCGAGAGCATGTGT+GGG | + | chr3.3:92894428-92894447 | MS.gene69436:CDS | 50.0% |
| ! | TTCTCTAGCGAGAGCATGTG+TGG | + | chr3.3:92894427-92894446 | MS.gene69436:CDS | 50.0% |
| !! | AGGCGAGTTTGTTAGCATGG+TGG | - | chr3.3:92893804-92893823 | None:intergenic | 50.0% |
| !! | TGGAGGCGAGTTTGTTAGCA+TGG | - | chr3.3:92893807-92893826 | None:intergenic | 50.0% |
| ACAGTTGGAGGAGGAGAAGC+AGG | - | chr3.3:92894202-92894221 | None:intergenic | 55.0% | |
| !! | TGTTAGCATGGTGGACACGG+TGG | - | chr3.3:92893795-92893814 | None:intergenic | 55.0% |
| GCATAAGGCGGCTTCATCCG+CGG | - | chr3.3:92893761-92893780 | None:intergenic | 60.0% | |
| GTCGCAGGTGGAGCATAAGG+CGG | - | chr3.3:92893773-92893792 | None:intergenic | 60.0% | |
| GTGGTCGCAGGTGGAGCATA+AGG | - | chr3.3:92893776-92893795 | None:intergenic | 60.0% | |
| ! | GGTGGTTGAGAGAGAAGCGC+CGG | - | chr3.3:92893834-92893853 | None:intergenic | 60.0% |
| !! | AGAGAAGCGCCGGTGTTTGG+AGG | - | chr3.3:92893824-92893843 | None:intergenic | 60.0% |
| !! | GAGAGAGAAGCGCCGGTGTT+TGG | - | chr3.3:92893827-92893846 | None:intergenic | 60.0% |
| !! | ATGGTGGACACGGTGGTCGC+AGG | - | chr3.3:92893788-92893807 | None:intergenic | 65.0% |
| GTGGACACGGTGGTCGCAGG+TGG | - | chr3.3:92893785-92893804 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 92893706 | 92894585 | 92893706 | ID=MS.gene69436 |
| chr3.3 | mRNA | 92893706 | 92894585 | 92893706 | ID=MS.gene69436.t1;Parent=MS.gene69436 |
| chr3.3 | exon | 92893706 | 92893897 | 92893706 | ID=MS.gene69436.t1.exon1;Parent=MS.gene69436.t1 |
| chr3.3 | CDS | 92893706 | 92893897 | 92893706 | ID=cds.MS.gene69436.t1;Parent=MS.gene69436.t1 |
| chr3.3 | exon | 92894064 | 92894585 | 92894064 | ID=MS.gene69436.t1.exon2;Parent=MS.gene69436.t1 |
| chr3.3 | CDS | 92894064 | 92894585 | 92894064 | ID=cds.MS.gene69436.t1;Parent=MS.gene69436.t1 |
| Gene Sequence |
| Protein sequence |
