Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69457.t1 | XP_013462165.1 | 87.9 | 596 | 59 | 4 | 1 | 592 | 1 | 587 | 1.70E-290 | 1008.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69457.t1 | Q9FWS9 | 47.0 | 411 | 174 | 9 | 35 | 430 | 50 | 431 | 4.2e-83 | 310.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69457.t1 | A0A072VDF1 | 87.9 | 596 | 59 | 4 | 1 | 592 | 1 | 587 | 1.3e-290 | 1008.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene69457.t1 | TF | HB-BELL |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69457.t1 | MTR_3g112300 | 90.772 | 596 | 42 | 5 | 1 | 592 | 1 | 587 | 0.0 | 1105 |
| MS.gene69457.t1 | MTR_3g112300 | 88.235 | 459 | 48 | 2 | 1 | 459 | 1 | 453 | 0.0 | 841 |
| MS.gene69457.t1 | MTR_3g112300 | 93.103 | 87 | 4 | 2 | 508 | 592 | 431 | 517 | 5.83e-43 | 161 |
| MS.gene69457.t1 | MTR_3g112300 | 92.092 | 392 | 31 | 0 | 1 | 392 | 1 | 392 | 0.0 | 757 |
| MS.gene69457.t1 | MTR_3g112300 | 91.644 | 371 | 31 | 0 | 1 | 371 | 1 | 371 | 0.0 | 714 |
| MS.gene69457.t1 | MTR_1g023050 | 61.111 | 648 | 175 | 19 | 1 | 592 | 1 | 627 | 0.0 | 690 |
| MS.gene69457.t1 | MTR_4g051532 | 55.357 | 280 | 112 | 5 | 162 | 434 | 217 | 490 | 5.83e-84 | 277 |
| MS.gene69457.t1 | MTR_1g057790 | 54.064 | 283 | 107 | 6 | 162 | 430 | 161 | 434 | 6.42e-84 | 275 |
| MS.gene69457.t1 | MTR_5g018860 | 48.905 | 274 | 121 | 4 | 161 | 423 | 337 | 602 | 4.83e-79 | 265 |
| MS.gene69457.t1 | MTR_8g078480 | 49.635 | 274 | 121 | 5 | 158 | 420 | 384 | 651 | 4.93e-79 | 266 |
| MS.gene69457.t1 | MTR_7g106320 | 53.962 | 265 | 112 | 4 | 163 | 420 | 172 | 433 | 1.27e-78 | 261 |
| MS.gene69457.t1 | MTR_8g098815 | 47.183 | 284 | 120 | 8 | 141 | 408 | 163 | 432 | 4.17e-73 | 246 |
| MS.gene69457.t1 | MTR_3g112290 | 45.051 | 293 | 127 | 6 | 156 | 431 | 159 | 434 | 2.30e-69 | 231 |
| MS.gene69457.t1 | MTR_7g065050 | 37.353 | 340 | 170 | 10 | 158 | 489 | 133 | 437 | 2.42e-60 | 209 |
| MS.gene69457.t1 | MTR_4g019450 | 42.366 | 262 | 124 | 5 | 158 | 415 | 192 | 430 | 1.82e-57 | 203 |
| MS.gene69457.t1 | MTR_2g095050 | 39.871 | 311 | 140 | 6 | 158 | 443 | 244 | 532 | 1.64e-56 | 201 |
| MS.gene69457.t1 | MTR_1g016490 | 39.847 | 261 | 145 | 6 | 159 | 414 | 240 | 493 | 4.01e-44 | 165 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69457.t1 | AT1G19700 | 47.470 | 415 | 173 | 13 | 34 | 428 | 46 | 435 | 3.14e-105 | 328 |
| MS.gene69457.t1 | AT1G19700 | 47.470 | 415 | 173 | 13 | 34 | 428 | 46 | 435 | 3.14e-105 | 328 |
| MS.gene69457.t1 | AT1G19700 | 47.470 | 415 | 173 | 13 | 34 | 428 | 46 | 435 | 3.14e-105 | 328 |
| MS.gene69457.t1 | AT1G19700 | 47.470 | 415 | 173 | 13 | 34 | 428 | 46 | 435 | 3.14e-105 | 328 |
| MS.gene69457.t1 | AT1G19700 | 47.470 | 415 | 173 | 13 | 34 | 428 | 46 | 435 | 3.14e-105 | 328 |
| MS.gene69457.t1 | AT1G75410 | 45.894 | 414 | 174 | 8 | 35 | 430 | 50 | 431 | 2.31e-104 | 325 |
| MS.gene69457.t1 | AT1G75410 | 45.894 | 414 | 174 | 8 | 35 | 430 | 50 | 431 | 2.31e-104 | 325 |
| MS.gene69457.t1 | AT2G16400 | 44.493 | 454 | 168 | 14 | 150 | 592 | 102 | 482 | 4.34e-104 | 323 |
| MS.gene69457.t1 | AT4G34610 | 44.218 | 441 | 182 | 15 | 165 | 592 | 143 | 532 | 8.39e-99 | 311 |
| MS.gene69457.t1 | AT4G34610 | 44.218 | 441 | 182 | 15 | 165 | 592 | 143 | 532 | 8.39e-99 | 311 |
| MS.gene69457.t1 | AT4G34610 | 44.218 | 441 | 182 | 15 | 165 | 592 | 143 | 532 | 8.39e-99 | 311 |
| MS.gene69457.t1 | AT4G34610 | 44.218 | 441 | 182 | 15 | 165 | 592 | 143 | 532 | 8.39e-99 | 311 |
| MS.gene69457.t1 | AT1G75410 | 43.617 | 376 | 162 | 8 | 35 | 392 | 50 | 393 | 2.77e-83 | 266 |
| MS.gene69457.t1 | AT2G23760 | 50.382 | 262 | 108 | 4 | 165 | 413 | 240 | 492 | 9.77e-77 | 256 |
| MS.gene69457.t1 | AT2G23760 | 50.382 | 262 | 108 | 4 | 165 | 413 | 240 | 492 | 9.77e-77 | 256 |
| MS.gene69457.t1 | AT2G23760 | 50.382 | 262 | 108 | 4 | 165 | 413 | 240 | 492 | 9.77e-77 | 256 |
| MS.gene69457.t1 | AT2G35940 | 39.294 | 425 | 207 | 12 | 158 | 536 | 186 | 605 | 1.46e-75 | 254 |
| MS.gene69457.t1 | AT2G35940 | 39.294 | 425 | 207 | 12 | 158 | 536 | 186 | 605 | 1.46e-75 | 254 |
| MS.gene69457.t1 | AT2G35940 | 39.294 | 425 | 207 | 12 | 158 | 536 | 186 | 605 | 1.46e-75 | 254 |
| MS.gene69457.t1 | AT4G36870 | 48.315 | 267 | 115 | 5 | 161 | 414 | 311 | 567 | 7.49e-73 | 248 |
| MS.gene69457.t1 | AT4G36870 | 48.315 | 267 | 115 | 5 | 161 | 414 | 311 | 567 | 7.49e-73 | 248 |
| MS.gene69457.t1 | AT2G23760 | 42.038 | 314 | 108 | 5 | 165 | 413 | 240 | 544 | 7.76e-67 | 230 |
| MS.gene69457.t1 | AT2G27220 | 46.185 | 249 | 101 | 5 | 168 | 415 | 82 | 298 | 3.97e-66 | 222 |
| MS.gene69457.t1 | AT2G27220 | 46.185 | 249 | 101 | 5 | 168 | 415 | 82 | 298 | 3.97e-66 | 222 |
| MS.gene69457.t1 | AT2G27220 | 43.446 | 267 | 100 | 7 | 168 | 415 | 82 | 316 | 1.66e-62 | 213 |
| MS.gene69457.t1 | AT5G41410 | 39.683 | 315 | 140 | 7 | 240 | 538 | 273 | 553 | 1.84e-60 | 212 |
| MS.gene69457.t1 | AT1G75430 | 41.026 | 273 | 132 | 7 | 163 | 419 | 17 | 276 | 9.42e-60 | 201 |
| MS.gene69457.t1 | AT4G36870 | 45.122 | 246 | 112 | 5 | 161 | 393 | 311 | 546 | 2.22e-57 | 202 |
| MS.gene69457.t1 | AT4G36870 | 45.082 | 244 | 111 | 5 | 161 | 391 | 311 | 544 | 1.77e-56 | 200 |
| MS.gene69457.t1 | AT5G02030 | 42.336 | 274 | 121 | 6 | 158 | 415 | 166 | 418 | 1.30e-53 | 192 |
| MS.gene69457.t1 | AT2G27990 | 52.542 | 177 | 75 | 3 | 243 | 415 | 323 | 494 | 3.40e-50 | 183 |
| MS.gene69457.t1 | AT4G32980 | 37.736 | 265 | 141 | 5 | 156 | 414 | 195 | 441 | 4.55e-44 | 164 |
| MS.gene69457.t1 | AT4G32980 | 37.736 | 265 | 141 | 5 | 156 | 414 | 195 | 441 | 4.55e-44 | 164 |
| MS.gene69457.t1 | AT1G75430 | 33.778 | 225 | 120 | 7 | 163 | 371 | 17 | 228 | 7.60e-28 | 114 |
| MS.gene69457.t1 | AT2G27990 | 43.609 | 133 | 66 | 3 | 243 | 371 | 323 | 450 | 1.67e-24 | 107 |
Find 120 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATCTTTGGACATGGTTGC+TGG | 0.171008 | 3.3:-92588009 | MS.gene69457:CDS |
| GACTATCATTTCACAGATTC+AGG | 0.242730 | 3.3:-92586821 | MS.gene69457:CDS |
| ATCCAACAAATTCTGTCTTT+TGG | 0.254798 | 3.3:+92588382 | None:intergenic |
| TTAATGCACGTGTGCGTCTT+TGG | 0.261906 | 3.3:-92587333 | MS.gene69457:CDS |
| AGAGATTAATAGTAATAAAT+TGG | 0.292200 | 3.3:-92587206 | MS.gene69457:CDS |
| GCAAATTGTGGTGTCATCTT+TGG | 0.309506 | 3.3:-92588022 | MS.gene69457:CDS |
| CCCAACCAAGCATTCTCTTC+AGG | 0.317247 | 3.3:-92589079 | MS.gene69457:CDS |
| CATCTTTGGACATGGTTGCT+GGG | 0.322770 | 3.3:-92588008 | MS.gene69457:CDS |
| CCTTAAGATATTGAGAGTTT+AGG | 0.323728 | 3.3:+92588597 | None:intergenic |
| CCTAAACTCTCAATATCTTA+AGG | 0.324664 | 3.3:-92588597 | MS.gene69457:CDS |
| TTTCCATTCCATGTTGCTTT+CGG | 0.331914 | 3.3:+92588540 | None:intergenic |
| CTCCAAGGTAAAAGAGATTA+TGG | 0.332690 | 3.3:-92587232 | MS.gene69457:CDS |
| GAAATATACAAAGAAGAGTT+TGG | 0.368762 | 3.3:-92587295 | MS.gene69457:CDS |
| CGCAATGCAAGTGTAGTATA+TGG | 0.380736 | 3.3:+92587970 | None:intergenic |
| CACATATGATTTAACAGAGT+TGG | 0.383789 | 3.3:-92587011 | MS.gene69457:CDS |
| GTTGGGAAAACACTCCCTTT+TGG | 0.402879 | 3.3:+92588673 | None:intergenic |
| AAGTGATTCAAAGGAACCTT+GGG | 0.404482 | 3.3:-92587894 | MS.gene69457:CDS |
| ATTCTCTTCAGGGTCCTATA+TGG | 0.406017 | 3.3:-92589068 | MS.gene69457:CDS |
| TATGGTATCAGGTGGCAAAT+TGG | 0.411576 | 3.3:-92587360 | MS.gene69457:intron |
| AATGTGATAGATTGTGGAAA+TGG | 0.412066 | 3.3:-92587103 | MS.gene69457:CDS |
| TTGAGAGTTTAGGAAAATGT+TGG | 0.412411 | 3.3:+92588607 | None:intergenic |
| CGAAACCGGTGTCATTATAC+TGG | 0.413951 | 3.3:+92588810 | None:intergenic |
| GGAAAGCAACAACACATGTT+TGG | 0.421673 | 3.3:-92586800 | MS.gene69457:CDS |
| TCATTATACTGGTATTGAAA+TGG | 0.422426 | 3.3:+92588821 | None:intergenic |
| TGATCTGAGGAGTGAGGGTT+GGG | 0.428043 | 3.3:+92588656 | None:intergenic |
| CCAACCAAGCATTCTCTTCA+GGG | 0.428447 | 3.3:-92589078 | MS.gene69457:CDS |
| AACTGGTTTGACAAGGAATC+AGG | 0.432153 | 3.3:-92587498 | MS.gene69457:intron |
| ACATATGATTTAACAGAGTT+GGG | 0.435731 | 3.3:-92587010 | MS.gene69457:CDS |
| CTGTTTCAATACTTCGTGCT+TGG | 0.440367 | 3.3:-92587750 | MS.gene69457:CDS |
| TCCTTTGAATCACTTGAACT+TGG | 0.447044 | 3.3:+92587902 | None:intergenic |
| ATTCATCAGCGATACGAAAC+CGG | 0.447145 | 3.3:+92588796 | None:intergenic |
| ATAATGCTAGCTAGGCAAAC+TGG | 0.452403 | 3.3:-92587515 | MS.gene69457:CDS |
| CCCTGAAGAGAATGCTTGGT+TGG | 0.454991 | 3.3:+92589078 | None:intergenic |
| TTGTATATTTCCTCAACCAT+TGG | 0.456824 | 3.3:+92587307 | None:intergenic |
| AGACATGCTTTCCATGCATT+CGG | 0.460937 | 3.3:+92588718 | None:intergenic |
| TTAGATATAGTAGTTCCCTT+TGG | 0.461116 | 3.3:+92588761 | None:intergenic |
| CAAAAGGCACTTCAGCATCT+TGG | 0.463824 | 3.3:-92587820 | MS.gene69457:CDS |
| GGAGGGACAGATGCATTAGA+AGG | 0.464657 | 3.3:+92588842 | None:intergenic |
| TGCATGGAAAGCATGTCTTC+CGG | 0.466072 | 3.3:-92588713 | MS.gene69457:CDS |
| ATCTTTGGACATGGTTGCTG+GGG | 0.467421 | 3.3:-92588007 | MS.gene69457:CDS |
| CAGAGAAAATAATGCTAGCT+AGG | 0.467771 | 3.3:-92587523 | MS.gene69457:CDS |
| AGCCAAAAGACAGAATTTGT+TGG | 0.469071 | 3.3:-92588384 | MS.gene69457:CDS |
| ACCAAGTTTAACACACCTAT+AGG | 0.472281 | 3.3:-92588977 | MS.gene69457:CDS |
| CGAGGTGAACATATCCATAT+AGG | 0.479681 | 3.3:+92589054 | None:intergenic |
| CAGTCTATGCAAATAACTTC+GGG | 0.481949 | 3.3:-92588452 | MS.gene69457:CDS |
| ATAGTCACTGTGTCGCCTAT+AGG | 0.482382 | 3.3:+92588962 | None:intergenic |
| CAAGTGATTCAAAGGAACCT+TGG | 0.483068 | 3.3:-92587895 | MS.gene69457:CDS |
| TACATGTTGTCTAGTGGAAG+AGG | 0.483872 | 3.3:+92587132 | None:intergenic |
| CTCCTCAGATCACTGCCTGC+AGG | 0.488491 | 3.3:-92588645 | MS.gene69457:CDS |
| GCCTATAGGTGTGTTAAACT+TGG | 0.490982 | 3.3:+92588976 | None:intergenic |
| GGTAATGTCATGAAATCCTC+CGG | 0.496563 | 3.3:+92588694 | None:intergenic |
| GGATATCTCACAAGAAGGAT+TGG | 0.496624 | 3.3:+92588409 | None:intergenic |
| TCAGTCTATGCAAATAACTT+CGG | 0.500629 | 3.3:-92588453 | MS.gene69457:CDS |
| TCACAATGTCTCTCTTGCAT+TGG | 0.504072 | 3.3:-92586957 | MS.gene69457:CDS |
| GGATTGGAATTAGAATCATT+AGG | 0.508994 | 3.3:+92588425 | None:intergenic |
| AGCATTGGAATGCTCATCAA+TGG | 0.509427 | 3.3:+92588934 | None:intergenic |
| CCAACAGCTTAGGCAACAAA+AGG | 0.510811 | 3.3:-92587836 | MS.gene69457:CDS |
| CGAGACTAAGAGATAACTCT+TGG | 0.512889 | 3.3:+92588876 | None:intergenic |
| ACACCACAATTTGCATTCGA+TGG | 0.516116 | 3.3:+92588031 | None:intergenic |
| TACATGAGAGCTGTAAGCAT+TGG | 0.517302 | 3.3:+92588919 | None:intergenic |
| CCTGAAGAGAATGCTTGGTT+GGG | 0.517326 | 3.3:+92589079 | None:intergenic |
| GATTTCATGACATTACCAAA+AGG | 0.521517 | 3.3:-92588688 | MS.gene69457:CDS |
| TCATCTGAAAATACACTCCA+AGG | 0.523657 | 3.3:-92587247 | MS.gene69457:CDS |
| TGTCCGAAAGCAACATGGAA+TGG | 0.523675 | 3.3:-92588543 | MS.gene69457:CDS |
| GTGATCTGAGGAGTGAGGGT+TGG | 0.527310 | 3.3:+92588655 | None:intergenic |
| CAAGAGTTATCTCTTAGTCT+CGG | 0.528666 | 3.3:-92588875 | MS.gene69457:CDS |
| AATTCTTGTCGTCTTCCAAA+GGG | 0.529186 | 3.3:-92588776 | MS.gene69457:CDS |
| GAATTCTTGTCGTCTTCCAA+AGG | 0.533875 | 3.3:-92588777 | MS.gene69457:CDS |
| TAAGCTGTTGGTCCACGTAC+CGG | 0.539458 | 3.3:+92587848 | None:intergenic |
| AAGAGTTATCTCTTAGTCTC+GGG | 0.540585 | 3.3:-92588874 | MS.gene69457:CDS |
| AGGACCCTGAAGAGAATGCT+TGG | 0.541911 | 3.3:+92589074 | None:intergenic |
| GTATTCCTTCTTGTTCCCCA+AGG | 0.544341 | 3.3:+92587878 | None:intergenic |
| ATTTCATGACATTACCAAAA+GGG | 0.544569 | 3.3:-92588687 | MS.gene69457:CDS |
| TCTTTGGACATGGTTGCTGG+GGG | 0.546073 | 3.3:-92588006 | MS.gene69457:CDS |
| ACCAAGTTCAAGTGATTCAA+AGG | 0.549397 | 3.3:-92587903 | MS.gene69457:CDS |
| GGTACGTGGACCAACAGCTT+AGG | 0.555219 | 3.3:-92587846 | MS.gene69457:CDS |
| GCTGAGGATATCTCACAAGA+AGG | 0.555753 | 3.3:+92588404 | None:intergenic |
| TTGGTGTTATGCGGCAAGCA+TGG | 0.558919 | 3.3:-92587801 | MS.gene69457:CDS |
| CACTGCCTGCAGGATTCACA+AGG | 0.565086 | 3.3:-92588635 | MS.gene69457:CDS |
| ATTGAAAAGTGCCGAATGCA+TGG | 0.565403 | 3.3:-92588729 | MS.gene69457:CDS |
| CAACTCTGTTAAATCATATG+TGG | 0.566114 | 3.3:+92587012 | None:intergenic |
| TAATAATAATAATCAGACAT+TGG | 0.566437 | 3.3:-92586873 | MS.gene69457:CDS |
| TTCAGCATCTTGGTGTTATG+CGG | 0.567244 | 3.3:-92587810 | MS.gene69457:CDS |
| GATAATCCCAAAGATAGTGA+TGG | 0.570048 | 3.3:-92588488 | MS.gene69457:CDS |
| TTATACTGGTATTGAAATGG+AGG | 0.572976 | 3.3:+92588824 | None:intergenic |
| AAGAAGGAATACCTCGTCTC+CGG | 0.574564 | 3.3:-92587867 | MS.gene69457:CDS |
| AGGAACCTTGGGGAACAAGA+AGG | 0.579072 | 3.3:-92587883 | MS.gene69457:CDS |
| AATACCTCGTCTCCGGTACG+TGG | 0.579283 | 3.3:-92587860 | MS.gene69457:CDS |
| TCTTTGGAAACCAATGGTTG+AGG | 0.583656 | 3.3:-92587317 | MS.gene69457:CDS |
| TTGAGAAACTGTGAAAGCGA+TGG | 0.592333 | 3.3:-92586932 | MS.gene69457:CDS |
| GGTAACTTTACAACTGTGGA+TGG | 0.593227 | 3.3:-92586989 | MS.gene69457:CDS |
| ATGAATGGCATCATCAGATG+TGG | 0.596558 | 3.3:+92586904 | None:intergenic |
| CAATACCAGTATAATGACAC+CGG | 0.603044 | 3.3:-92588815 | MS.gene69457:CDS |
| GAAAATTGCATGGCAACCAA+AGG | 0.604743 | 3.3:-92587081 | MS.gene69457:CDS |
| GTTAATGTCCGAAAGCAACA+TGG | 0.605991 | 3.3:-92588548 | MS.gene69457:CDS |
| TCAATATCTTAAGGCTACAC+AGG | 0.606571 | 3.3:-92588588 | MS.gene69457:CDS |
| GGCAGTGATCTGAGGAGTGA+GGG | 0.610386 | 3.3:+92588651 | None:intergenic |
| TTTACAACTGTGGATGGTGG+TGG | 0.611372 | 3.3:-92586983 | MS.gene69457:CDS |
| GGTTGATACCAGTTACCCCA+AGG | 0.615136 | 3.3:-92587549 | MS.gene69457:intron |
| AACTTTACAACTGTGGATGG+TGG | 0.616544 | 3.3:-92586986 | MS.gene69457:CDS |
| CTAGGCAAACTGGTTTGACA+AGG | 0.616619 | 3.3:-92587505 | MS.gene69457:CDS |
| GATTCGTTGTAGTAATTGTG+AGG | 0.618741 | 3.3:+92589019 | None:intergenic |
| AGGCAGTGATCTGAGGAGTG+AGG | 0.618773 | 3.3:+92588650 | None:intergenic |
| TGGTCCACGTACCGGAGACG+AGG | 0.620141 | 3.3:+92587856 | None:intergenic |
| ATCCTGCAGGCAGTGATCTG+AGG | 0.622811 | 3.3:+92588643 | None:intergenic |
| TAGTAATTGTGAGGTAACAA+AGG | 0.627033 | 3.3:+92589028 | None:intergenic |
| TGTGGTGTCATCTTTGGACA+TGG | 0.628842 | 3.3:-92588016 | MS.gene69457:CDS |
| GTTGGGTAACTTTACAACTG+TGG | 0.629995 | 3.3:-92586993 | MS.gene69457:CDS |
| TATGGTTACCTCATCCAACA+TGG | 0.631595 | 3.3:+92588340 | None:intergenic |
| TGTGGAAATGGAAAATTGCA+TGG | 0.642335 | 3.3:-92587091 | MS.gene69457:CDS |
| TGTGCGTCTTTGGAAACCAA+TGG | 0.645810 | 3.3:-92587323 | MS.gene69457:CDS |
| GATTATCCAATCCAATGATG+CGG | 0.653767 | 3.3:+92588504 | None:intergenic |
| ATGCAAGAGAGACATTGTGA+TGG | 0.664466 | 3.3:+92586960 | None:intergenic |
| TATACTGGTATTGAAATGGA+GGG | 0.666797 | 3.3:+92588825 | None:intergenic |
| GTGAGGTAACAAAGGACTCG+AGG | 0.675570 | 3.3:+92589036 | None:intergenic |
| CTGCCATCGAATGCAAATTG+TGG | 0.686632 | 3.3:-92588034 | MS.gene69457:CDS |
| ATGGAAAGCATGTCTTCCGG+AGG | 0.687343 | 3.3:-92588710 | MS.gene69457:CDS |
| TCTATGCAAATAACTTCGGG+CGG | 0.702592 | 3.3:-92588449 | MS.gene69457:CDS |
| AGTGATTCAAAGGAACCTTG+GGG | 0.732244 | 3.3:-92587893 | MS.gene69457:CDS |
| CAAGCATGGAGACCTCAGAG+AGG | 0.733220 | 3.3:-92587787 | MS.gene69457:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAGATTAATAGTAATAAAT+TGG | - | chr3.3:92588645-92588664 | MS.gene69457:CDS | 15.0% |
| !! | ATACAAATTAAATCCATAAA+AGG | + | chr3.3:92587557-92587576 | None:intergenic | 15.0% |
| !! | TAATAATAATAATCAGACAT+TGG | - | chr3.3:92588978-92588997 | MS.gene69457:CDS | 15.0% |
| !!! | ATCTTTTAATTTATATGGTA+TGG | - | chr3.3:92588473-92588492 | MS.gene69457:CDS | 15.0% |
| !!! | ATTATTATGTCTTTTATGAA+TGG | + | chr3.3:92588965-92588984 | None:intergenic | 15.0% |
| !!! | TTATCATATCTAACTTTTAT+TGG | - | chr3.3:92587641-92587660 | MS.gene69457:intron | 15.0% |
| !! | AAATTAAATCCATAAAAGGA+AGG | + | chr3.3:92587553-92587572 | None:intergenic | 20.0% |
| !! | GAAAATATAAAATTGAGTGA+AGG | + | chr3.3:92588186-92588205 | None:intergenic | 20.0% |
| !! | GTATTATAAAGTAACACATA+CGG | + | chr3.3:92588148-92588167 | None:intergenic | 20.0% |
| !! | TTCAACTTTCATTTCATAAT+TGG | - | chr3.3:92588281-92588300 | MS.gene69457:intron | 20.0% |
| !!! | ATATTTTCAATTAGTTGCAA+TGG | - | chr3.3:92588198-92588217 | MS.gene69457:intron | 20.0% |
| !!! | GTGTCATCTTTTAATTTATA+TGG | - | chr3.3:92588468-92588487 | MS.gene69457:CDS | 20.0% |
| ! | AATTTATATGGTATGGTATC+AGG | - | chr3.3:92588480-92588499 | MS.gene69457:CDS | 25.0% |
| ! | ACATATGATTTAACAGAGTT+GGG | - | chr3.3:92588841-92588860 | MS.gene69457:CDS | 25.0% |
| ! | AGTGCAAAAACTTTATCATA+AGG | - | chr3.3:92587593-92587612 | MS.gene69457:intron | 25.0% |
| ! | ATTTCATGACATTACCAAAA+GGG | - | chr3.3:92587164-92587183 | MS.gene69457:CDS | 25.0% |
| ! | GAAAAAAATGTGATAGATTG+TGG | - | chr3.3:92588742-92588761 | MS.gene69457:CDS | 25.0% |
| ! | GAAATATACAAAGAAGAGTT+TGG | - | chr3.3:92588556-92588575 | MS.gene69457:CDS | 25.0% |
| !! | ATTATTTTCTCTGAATCCTT+GGG | + | chr3.3:92588321-92588340 | None:intergenic | 25.0% |
| !! | TATTCTCTTCTTTTATTCCA+TGG | - | chr3.3:92587706-92587725 | MS.gene69457:intron | 25.0% |
| !! | TCATTATACTGGTATTGAAA+TGG | + | chr3.3:92587033-92587052 | None:intergenic | 25.0% |
| !!! | AAGTATTGAAACAGAGTTTT+CGG | + | chr3.3:92588095-92588114 | None:intergenic | 25.0% |
| AATGTGATAGATTGTGGAAA+TGG | - | chr3.3:92588748-92588767 | MS.gene69457:CDS | 30.0% | |
| AGTGAAGGATTAGAATTTAG+AGG | + | chr3.3:92588171-92588190 | None:intergenic | 30.0% | |
| CAACTCTGTTAAATCATATG+TGG | + | chr3.3:92588842-92588861 | None:intergenic | 30.0% | |
| CACATATGATTTAACAGAGT+TGG | - | chr3.3:92588840-92588859 | MS.gene69457:CDS | 30.0% | |
| CCTAAACTCTCAATATCTTA+AGG | - | chr3.3:92587254-92587273 | MS.gene69457:CDS | 30.0% | |
| CCTTAAGATATTGAGAGTTT+AGG | + | chr3.3:92587257-92587276 | None:intergenic | 30.0% | |
| GAATAATTGTCACACACTAT+CGG | + | chr3.3:92587691-92587710 | None:intergenic | 30.0% | |
| GATTTCATGACATTACCAAA+AGG | - | chr3.3:92587163-92587182 | MS.gene69457:CDS | 30.0% | |
| GGATGCAATGCTAAATAATA+TGG | + | chr3.3:92587532-92587551 | None:intergenic | 30.0% | |
| GGATTGGAATTAGAATCATT+AGG | + | chr3.3:92587429-92587448 | None:intergenic | 30.0% | |
| GTGAAGGATTAGAATTTAGA+GGG | + | chr3.3:92588170-92588189 | None:intergenic | 30.0% | |
| TAGTAATTGTGAGGTAACAA+AGG | + | chr3.3:92586826-92586845 | None:intergenic | 30.0% | |
| TCAGTCTATGCAAATAACTT+CGG | - | chr3.3:92587398-92587417 | MS.gene69457:intron | 30.0% | |
| TTAAAAGATGACACCACAAT+TGG | + | chr3.3:92588462-92588481 | None:intergenic | 30.0% | |
| TTAGATATAGTAGTTCCCTT+TGG | + | chr3.3:92587093-92587112 | None:intergenic | 30.0% | |
| TTGAGAGTTTAGGAAAATGT+TGG | + | chr3.3:92587247-92587266 | None:intergenic | 30.0% | |
| TTGTATATTTCCTCAACCAT+TGG | + | chr3.3:92588547-92588566 | None:intergenic | 30.0% | |
| ! | AGATTTTCCATCACTATCTT+TGG | + | chr3.3:92587373-92587392 | None:intergenic | 30.0% |
| ! | ATCCAACAAATTCTGTCTTT+TGG | + | chr3.3:92587472-92587491 | None:intergenic | 30.0% |
| ! | CATTATTTTCTCTGAATCCT+TGG | + | chr3.3:92588322-92588341 | None:intergenic | 30.0% |
| ! | GATTTTCCATCACTATCTTT+GGG | + | chr3.3:92587372-92587391 | None:intergenic | 30.0% |
| ! | TATACTGGTATTGAAATGGA+GGG | + | chr3.3:92587029-92587048 | None:intergenic | 30.0% |
| ! | TTATACTGGTATTGAAATGG+AGG | + | chr3.3:92587030-92587049 | None:intergenic | 30.0% |
| ! | TTATTTTCTCTGAATCCTTG+GGG | + | chr3.3:92588320-92588339 | None:intergenic | 30.0% |
| ! | TTTTTCTACATGTTGTCTAG+TGG | + | chr3.3:92588728-92588747 | None:intergenic | 30.0% |
| !! | AGTATTGAAACAGAGTTTTC+GGG | + | chr3.3:92588094-92588113 | None:intergenic | 30.0% |
| AAAAATCCGCATCATTGGAT+TGG | - | chr3.3:92587341-92587360 | MS.gene69457:CDS | 35.0% | |
| AAGAGTTATCTCTTAGTCTC+GGG | - | chr3.3:92586977-92586996 | MS.gene69457:CDS | 35.0% | |
| AAGTGATTCAAAGGAACCTT+GGG | - | chr3.3:92587957-92587976 | MS.gene69457:CDS | 35.0% | |
| AATTCTTGTCGTCTTCCAAA+GGG | - | chr3.3:92587075-92587094 | MS.gene69457:CDS | 35.0% | |
| ACCAAGTTCAAGTGATTCAA+AGG | - | chr3.3:92587948-92587967 | MS.gene69457:CDS | 35.0% | |
| ACCAAGTTTAACACACCTAT+AGG | - | chr3.3:92586874-92586893 | MS.gene69457:CDS | 35.0% | |
| AGCCAAAAGACAGAATTTGT+TGG | - | chr3.3:92587467-92587486 | MS.gene69457:intron | 35.0% | |
| CAAAGGCTCAGCATAAAAAA+TGG | - | chr3.3:92588787-92588806 | MS.gene69457:CDS | 35.0% | |
| CAAGAAAAAATCCGCATCAT+TGG | - | chr3.3:92587336-92587355 | MS.gene69457:CDS | 35.0% | |
| CAAGAGTTATCTCTTAGTCT+CGG | - | chr3.3:92586976-92586995 | MS.gene69457:CDS | 35.0% | |
| CAATACCAGTATAATGACAC+CGG | - | chr3.3:92587036-92587055 | MS.gene69457:CDS | 35.0% | |
| CAGAGAAAATAATGCTAGCT+AGG | - | chr3.3:92588328-92588347 | MS.gene69457:intron | 35.0% | |
| CAGTCTATGCAAATAACTTC+GGG | - | chr3.3:92587399-92587418 | MS.gene69457:intron | 35.0% | |
| CTCCAAGGTAAAAGAGATTA+TGG | - | chr3.3:92588619-92588638 | MS.gene69457:CDS | 35.0% | |
| CTGTAATCCTTTCTTTGTAC+TGG | - | chr3.3:92587765-92587784 | MS.gene69457:CDS | 35.0% | |
| GACTATCATTTCACAGATTC+AGG | - | chr3.3:92589030-92589049 | MS.gene69457:CDS | 35.0% | |
| GATAATCCCAAAGATAGTGA+TGG | - | chr3.3:92587363-92587382 | MS.gene69457:intron | 35.0% | |
| GATTATCCAATCCAATGATG+CGG | + | chr3.3:92587350-92587369 | None:intergenic | 35.0% | |
| GATTCGTTGTAGTAATTGTG+AGG | + | chr3.3:92586835-92586854 | None:intergenic | 35.0% | |
| TCAATATCTTAAGGCTACAC+AGG | - | chr3.3:92587263-92587282 | MS.gene69457:CDS | 35.0% | |
| TCATCTGAAAATACACTCCA+AGG | - | chr3.3:92588604-92588623 | MS.gene69457:CDS | 35.0% | |
| TCCTTTGAATCACTTGAACT+TGG | + | chr3.3:92587952-92587971 | None:intergenic | 35.0% | |
| TGTGGAAATGGAAAATTGCA+TGG | - | chr3.3:92588760-92588779 | MS.gene69457:CDS | 35.0% | |
| TTATATGGTATGGTATCAGG+TGG | - | chr3.3:92588483-92588502 | MS.gene69457:CDS | 35.0% | |
| TTCCATGGTTATTATGACAG+CGG | - | chr3.3:92587721-92587740 | MS.gene69457:intron | 35.0% | |
| ! | ACTTGTTGCATTGCATAATC+AGG | - | chr3.3:92588428-92588447 | MS.gene69457:CDS | 35.0% |
| ! | GACCATAATCTCTTTTACCT+TGG | + | chr3.3:92588624-92588643 | None:intergenic | 35.0% |
| !! | TTTCCATTCCATGTTGCTTT+CGG | + | chr3.3:92587314-92587333 | None:intergenic | 35.0% |
| !!! | CATTTTTTATGCTGAGCCTT+TGG | + | chr3.3:92588789-92588808 | None:intergenic | 35.0% |
| AAAAACCTTGTGAATCCTGC+AGG | + | chr3.3:92587224-92587243 | None:intergenic | 40.0% | |
| AACTTTACAACTGTGGATGG+TGG | - | chr3.3:92588865-92588884 | MS.gene69457:CDS | 40.0% | |
| ACACCACAATTTGCATTCGA+TGG | + | chr3.3:92587823-92587842 | None:intergenic | 40.0% | |
| AGACATGCTTTCCATGCATT+CGG | + | chr3.3:92587136-92587155 | None:intergenic | 40.0% | |
| AGTGATTCAAAGGAACCTTG+GGG | - | chr3.3:92587958-92587977 | MS.gene69457:CDS | 40.0% | |
| ATAATGCTAGCTAGGCAAAC+TGG | - | chr3.3:92588336-92588355 | MS.gene69457:intron | 40.0% | |
| ATGAATGGCATCATCAGATG+TGG | + | chr3.3:92588950-92588969 | None:intergenic | 40.0% | |
| ATGCAAGAGAGACATTGTGA+TGG | + | chr3.3:92588894-92588913 | None:intergenic | 40.0% | |
| ATTCATCAGCGATACGAAAC+CGG | + | chr3.3:92587058-92587077 | None:intergenic | 40.0% | |
| ATTCTCTTCAGGGTCCTATA+TGG | - | chr3.3:92586783-92586802 | MS.gene69457:CDS | 40.0% | |
| CAAGTGATTCAAAGGAACCT+TGG | - | chr3.3:92587956-92587975 | MS.gene69457:CDS | 40.0% | |
| CCTACAACCAGTACAAAGAA+AGG | + | chr3.3:92587775-92587794 | None:intergenic | 40.0% | |
| CGAGACTAAGAGATAACTCT+TGG | + | chr3.3:92586978-92586997 | None:intergenic | 40.0% | |
| CGAGGTGAACATATCCATAT+AGG | + | chr3.3:92586800-92586819 | None:intergenic | 40.0% | |
| CGCAATGCAAGTGTAGTATA+TGG | + | chr3.3:92587884-92587903 | None:intergenic | 40.0% | |
| CTGTTTCAATACTTCGTGCT+TGG | - | chr3.3:92588101-92588120 | MS.gene69457:intron | 40.0% | |
| GAAAATTGCATGGCAACCAA+AGG | - | chr3.3:92588770-92588789 | MS.gene69457:CDS | 40.0% | |
| GAATTCTTGTCGTCTTCCAA+AGG | - | chr3.3:92587074-92587093 | MS.gene69457:CDS | 40.0% | |
| GCCTATAGGTGTGTTAAACT+TGG | + | chr3.3:92586878-92586897 | None:intergenic | 40.0% | |
| GGAAAGCAACAACACATGTT+TGG | - | chr3.3:92589051-92589070 | MS.gene69457:CDS | 40.0% | |
| GGATATCTCACAAGAAGGAT+TGG | + | chr3.3:92587445-92587464 | None:intergenic | 40.0% | |
| GGTAACTTTACAACTGTGGA+TGG | - | chr3.3:92588862-92588881 | MS.gene69457:CDS | 40.0% | |
| GGTAATGTCATGAAATCCTC+CGG | + | chr3.3:92587160-92587179 | None:intergenic | 40.0% | |
| GTTAATGTCCGAAAGCAACA+TGG | - | chr3.3:92587303-92587322 | MS.gene69457:CDS | 40.0% | |
| GTTGGGTAACTTTACAACTG+TGG | - | chr3.3:92588858-92588877 | MS.gene69457:CDS | 40.0% | |
| TACATGAGAGCTGTAAGCAT+TGG | + | chr3.3:92586935-92586954 | None:intergenic | 40.0% | |
| TACATGTTGTCTAGTGGAAG+AGG | + | chr3.3:92588722-92588741 | None:intergenic | 40.0% | |
| TATGGTATCAGGTGGCAAAT+TGG | - | chr3.3:92588491-92588510 | MS.gene69457:CDS | 40.0% | |
| TATGGTTACCTCATCCAACA+TGG | + | chr3.3:92587514-92587533 | None:intergenic | 40.0% | |
| TCACAATGTCTCTCTTGCAT+TGG | - | chr3.3:92588894-92588913 | MS.gene69457:CDS | 40.0% | |
| TCAGGTACAGTTACCAATTG+TGG | - | chr3.3:92588446-92588465 | MS.gene69457:CDS | 40.0% | |
| TCTATGCAAATAACTTCGGG+CGG | - | chr3.3:92587402-92587421 | MS.gene69457:intron | 40.0% | |
| TTATTATGACAGCGGTGGTT+TGG | - | chr3.3:92587729-92587748 | MS.gene69457:CDS | 40.0% | |
| TTGAGAAACTGTGAAAGCGA+TGG | - | chr3.3:92588919-92588938 | MS.gene69457:CDS | 40.0% | |
| ! | AGCATTGGAATGCTCATCAA+TGG | + | chr3.3:92586920-92586939 | None:intergenic | 40.0% |
| ! | GACAAAGCTTTTGTCCATGT+TGG | - | chr3.3:92587497-92587516 | MS.gene69457:intron | 40.0% |
| ! | GCATTGCATCCTTCCTTTTA+TGG | - | chr3.3:92587541-92587560 | MS.gene69457:intron | 40.0% |
| ! | TCTTTGGAAACCAATGGTTG+AGG | - | chr3.3:92588534-92588553 | MS.gene69457:CDS | 40.0% |
| !! | AACTGGTTTGACAAGGAATC+AGG | - | chr3.3:92588353-92588372 | MS.gene69457:CDS | 40.0% |
| !! | ATTGAAAAGTGCCGAATGCA+TGG | - | chr3.3:92587122-92587141 | MS.gene69457:CDS | 40.0% |
| !! | CAAATTCTGTCTTTTGGCTG+AGG | + | chr3.3:92587466-92587485 | None:intergenic | 40.0% |
| !! | CCTTTCTTTGTACTGGTTGT+AGG | - | chr3.3:92587772-92587791 | MS.gene69457:CDS | 40.0% |
| !! | GCAAATTGTGGTGTCATCTT+TGG | - | chr3.3:92587829-92587848 | MS.gene69457:CDS | 40.0% |
| !! | TCTTTGTACTGGTTGTAGGT+AGG | - | chr3.3:92587776-92587795 | MS.gene69457:CDS | 40.0% |
| !! | TTCAGCATCTTGGTGTTATG+CGG | - | chr3.3:92588041-92588060 | MS.gene69457:CDS | 40.0% |
| AAGAAGGAATACCTCGTCTC+CGG | - | chr3.3:92587984-92588003 | MS.gene69457:CDS | 45.0% | |
| ATAGTCACTGTGTCGCCTAT+AGG | + | chr3.3:92586892-92586911 | None:intergenic | 45.0% | |
| ATCTTTGGACATGGTTGCTG+GGG | - | chr3.3:92587844-92587863 | MS.gene69457:CDS | 45.0% | |
| CACCGCTGTCATAATAACCA+TGG | + | chr3.3:92587726-92587745 | None:intergenic | 45.0% | |
| CATCTTTGGACATGGTTGCT+GGG | - | chr3.3:92587843-92587862 | MS.gene69457:CDS | 45.0% | |
| CATGGTTATTATGACAGCGG+TGG | - | chr3.3:92587724-92587743 | MS.gene69457:intron | 45.0% | |
| CCAACAGCTTAGGCAACAAA+AGG | - | chr3.3:92588015-92588034 | MS.gene69457:CDS | 45.0% | |
| CCAACCAAGCATTCTCTTCA+GGG | - | chr3.3:92586773-92586792 | MS.gene69457:CDS | 45.0% | |
| CCTGAAGAGAATGCTTGGTT+GGG | + | chr3.3:92586775-92586794 | None:intergenic | 45.0% | |
| CTGCCATCGAATGCAAATTG+TGG | - | chr3.3:92587817-92587836 | MS.gene69457:CDS | 45.0% | |
| GCTGAGGATATCTCACAAGA+AGG | + | chr3.3:92587450-92587469 | None:intergenic | 45.0% | |
| GTATTCCTTCTTGTTCCCCA+AGG | + | chr3.3:92587976-92587995 | None:intergenic | 45.0% | |
| TCATCTTTGGACATGGTTGC+TGG | - | chr3.3:92587842-92587861 | MS.gene69457:CDS | 45.0% | |
| TGTCCGAAAGCAACATGGAA+TGG | - | chr3.3:92587308-92587327 | MS.gene69457:CDS | 45.0% | |
| TTAATGCACGTGTGCGTCTT+TGG | - | chr3.3:92588518-92588537 | MS.gene69457:CDS | 45.0% | |
| ! | CCTTTTGTTGCCTAAGCTGT+TGG | + | chr3.3:92588018-92588037 | None:intergenic | 45.0% |
| ! | GCTTTTGTCCATGTTGGATG+AGG | - | chr3.3:92587503-92587522 | MS.gene69457:CDS | 45.0% |
| ! | GTTGGGAAAACACTCCCTTT+TGG | + | chr3.3:92587181-92587200 | None:intergenic | 45.0% |
| ! | TGCATGGAAAGCATGTCTTC+CGG | - | chr3.3:92587138-92587157 | MS.gene69457:CDS | 45.0% |
| ! | TGTGCGTCTTTGGAAACCAA+TGG | - | chr3.3:92588528-92588547 | MS.gene69457:CDS | 45.0% |
| ! | TTTACAACTGTGGATGGTGG+TGG | - | chr3.3:92588868-92588887 | MS.gene69457:CDS | 45.0% |
| !! | CAAAAGGCACTTCAGCATCT+TGG | - | chr3.3:92588031-92588050 | MS.gene69457:CDS | 45.0% |
| !! | CGAAACCGGTGTCATTATAC+TGG | + | chr3.3:92587044-92587063 | None:intergenic | 45.0% |
| !! | CTAGGCAAACTGGTTTGACA+AGG | - | chr3.3:92588346-92588365 | MS.gene69457:intron | 45.0% |
| !! | TGTGGTGTCATCTTTGGACA+TGG | - | chr3.3:92587835-92587854 | MS.gene69457:CDS | 45.0% |
| AGGAACCTTGGGGAACAAGA+AGG | - | chr3.3:92587968-92587987 | MS.gene69457:CDS | 50.0% | |
| AGGACCCTGAAGAGAATGCT+TGG | + | chr3.3:92586780-92586799 | None:intergenic | 50.0% | |
| CCCAACCAAGCATTCTCTTC+AGG | - | chr3.3:92586772-92586791 | MS.gene69457:CDS | 50.0% | |
| CCCTGAAGAGAATGCTTGGT+TGG | + | chr3.3:92586776-92586795 | None:intergenic | 50.0% | |
| CTCTGAATCCTTGGGGTAAC+TGG | + | chr3.3:92588313-92588332 | None:intergenic | 50.0% | |
| GGAGGGACAGATGCATTAGA+AGG | + | chr3.3:92587012-92587031 | None:intergenic | 50.0% | |
| GTGAGGTAACAAAGGACTCG+AGG | + | chr3.3:92586818-92586837 | None:intergenic | 50.0% | |
| TAAGCTGTTGGTCCACGTAC+CGG | + | chr3.3:92588006-92588025 | None:intergenic | 50.0% | |
| TCTTTGGACATGGTTGCTGG+GGG | - | chr3.3:92587845-92587864 | MS.gene69457:CDS | 50.0% | |
| TGATCTGAGGAGTGAGGGTT+GGG | + | chr3.3:92587198-92587217 | None:intergenic | 50.0% | |
| ! | ATGGAAAGCATGTCTTCCGG+AGG | - | chr3.3:92587141-92587160 | MS.gene69457:CDS | 50.0% |
| ! | GGTTGATACCAGTTACCCCA+AGG | - | chr3.3:92588302-92588321 | MS.gene69457:intron | 50.0% |
| !! | TTGGTGTTATGCGGCAAGCA+TGG | - | chr3.3:92588050-92588069 | MS.gene69457:CDS | 50.0% |
| !! | TTTTCGGGAAGTCCTCTCTG+AGG | + | chr3.3:92588079-92588098 | None:intergenic | 50.0% |
| AATACCTCGTCTCCGGTACG+TGG | - | chr3.3:92587991-92588010 | MS.gene69457:CDS | 55.0% | |
| AGGCAGTGATCTGAGGAGTG+AGG | + | chr3.3:92587204-92587223 | None:intergenic | 55.0% | |
| ATCCTGCAGGCAGTGATCTG+AGG | + | chr3.3:92587211-92587230 | None:intergenic | 55.0% | |
| CAAGCATGGAGACCTCAGAG+AGG | - | chr3.3:92588064-92588083 | MS.gene69457:intron | 55.0% | |
| CACTGCCTGCAGGATTCACA+AGG | - | chr3.3:92587216-92587235 | MS.gene69457:CDS | 55.0% | |
| GGCAGTGATCTGAGGAGTGA+GGG | + | chr3.3:92587203-92587222 | None:intergenic | 55.0% | |
| GGTACGTGGACCAACAGCTT+AGG | - | chr3.3:92588005-92588024 | MS.gene69457:CDS | 55.0% | |
| GTGATCTGAGGAGTGAGGGT+TGG | + | chr3.3:92587199-92587218 | None:intergenic | 55.0% | |
| CTCCTCAGATCACTGCCTGC+AGG | - | chr3.3:92587206-92587225 | MS.gene69457:CDS | 60.0% | |
| TTGGACATGGTTGCTGGGGG+TGG | - | chr3.3:92587848-92587867 | MS.gene69457:CDS | 60.0% | |
| TGGTCCACGTACCGGAGACG+AGG | + | chr3.3:92587998-92588017 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 92586766 | 92589107 | 92586766 | ID=MS.gene69457 |
| chr3.3 | mRNA | 92586766 | 92589107 | 92586766 | ID=MS.gene69457.t1;Parent=MS.gene69457 |
| chr3.3 | exon | 92588349 | 92589107 | 92588349 | ID=MS.gene69457.t1.exon1;Parent=MS.gene69457.t1 |
| chr3.3 | CDS | 92588349 | 92589107 | 92588349 | ID=cds.MS.gene69457.t1;Parent=MS.gene69457.t1 |
| chr3.3 | exon | 92587727 | 92588079 | 92587727 | ID=MS.gene69457.t1.exon2;Parent=MS.gene69457.t1 |
| chr3.3 | CDS | 92587727 | 92588079 | 92587727 | ID=cds.MS.gene69457.t1;Parent=MS.gene69457.t1 |
| chr3.3 | exon | 92587499 | 92587559 | 92587499 | ID=MS.gene69457.t1.exon3;Parent=MS.gene69457.t1 |
| chr3.3 | CDS | 92587499 | 92587559 | 92587499 | ID=cds.MS.gene69457.t1;Parent=MS.gene69457.t1 |
| chr3.3 | exon | 92586766 | 92587371 | 92586766 | ID=MS.gene69457.t1.exon4;Parent=MS.gene69457.t1 |
| chr3.3 | CDS | 92586766 | 92587371 | 92586766 | ID=cds.MS.gene69457.t1;Parent=MS.gene69457.t1 |
| Gene Sequence |
| Protein sequence |
