Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69547.t1 | KYP47138.1 | 52.9 | 698 | 161 | 3 | 1 | 533 | 1 | 695 | 3.80E-195 | 691.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69547.t1 | Q9LIE5 | 29.4 | 293 | 190 | 5 | 155 | 447 | 382 | 657 | 8.6e-31 | 136.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69547.t1 | A0A151RX65 | 52.9 | 698 | 161 | 3 | 1 | 533 | 1 | 695 | 2.7e-195 | 691.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene69547.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69547.t1 | MTR_4g102720 | 56.287 | 167 | 40 | 1 | 1 | 167 | 1 | 134 | 5.29e-56 | 189 |
| MS.gene69547.t1 | MTR_0402s0040 | 28.014 | 564 | 292 | 12 | 7 | 555 | 26 | 490 | 2.95e-49 | 179 |
| MS.gene69547.t1 | MTR_7g074790 | 41.420 | 169 | 80 | 2 | 3 | 170 | 6 | 156 | 3.64e-35 | 132 |
| MS.gene69547.t1 | MTR_7g061980 | 50.442 | 113 | 55 | 1 | 4 | 115 | 7 | 119 | 1.38e-31 | 119 |
| MS.gene69547.t1 | MTR_5g039760 | 38.012 | 171 | 80 | 3 | 4 | 172 | 7 | 153 | 2.36e-29 | 115 |
| MS.gene69547.t1 | MTR_5g015480 | 41.667 | 132 | 73 | 3 | 7 | 135 | 56 | 186 | 1.43e-19 | 89.4 |
| MS.gene69547.t1 | MTR_0558s0020 | 31.111 | 180 | 103 | 4 | 9 | 167 | 38 | 217 | 5.49e-18 | 85.5 |
| MS.gene69547.t1 | MTR_1g083640 | 31.111 | 180 | 103 | 4 | 9 | 167 | 53 | 232 | 1.15e-17 | 84.3 |
| MS.gene69547.t1 | MTR_1g057920 | 48.780 | 82 | 41 | 1 | 4 | 84 | 31 | 112 | 5.36e-17 | 77.8 |
| MS.gene69547.t1 | MTR_7g113010 | 38.760 | 129 | 64 | 2 | 4 | 130 | 454 | 569 | 1.33e-16 | 84.0 |
| MS.gene69547.t1 | MTR_2g014100 | 30.000 | 180 | 105 | 4 | 9 | 167 | 46 | 225 | 1.55e-16 | 80.1 |
| MS.gene69547.t1 | MTR_6g017200 | 49.367 | 79 | 39 | 1 | 7 | 84 | 58 | 136 | 4.93e-16 | 76.3 |
| MS.gene69547.t1 | MTR_2g070590 | 43.564 | 101 | 54 | 2 | 7 | 104 | 17 | 117 | 1.20e-15 | 73.9 |
| MS.gene69547.t1 | MTR_2g098920 | 40.000 | 105 | 59 | 4 | 7 | 109 | 80 | 182 | 6.82e-15 | 75.5 |
| MS.gene69547.t1 | MTR_4g067290 | 37.302 | 126 | 70 | 4 | 5 | 128 | 54 | 172 | 8.94e-15 | 74.7 |
| MS.gene69547.t1 | MTR_4g067290 | 36.719 | 128 | 72 | 4 | 5 | 130 | 54 | 174 | 1.10e-14 | 74.3 |
| MS.gene69547.t1 | MTR_4g067290 | 37.302 | 126 | 70 | 4 | 5 | 128 | 74 | 192 | 1.13e-14 | 74.7 |
| MS.gene69547.t1 | MTR_4g067290 | 36.719 | 128 | 72 | 4 | 5 | 130 | 74 | 194 | 1.55e-14 | 74.3 |
| MS.gene69547.t1 | MTR_4g067290 | 37.302 | 126 | 70 | 4 | 5 | 128 | 114 | 232 | 1.75e-14 | 75.1 |
| MS.gene69547.t1 | MTR_4g067290 | 36.719 | 128 | 72 | 4 | 5 | 130 | 72 | 192 | 1.76e-14 | 74.3 |
| MS.gene69547.t1 | MTR_6g090505 | 23.611 | 288 | 165 | 7 | 50 | 282 | 19 | 306 | 4.54e-14 | 74.7 |
| MS.gene69547.t1 | MTR_2g099430 | 43.678 | 87 | 48 | 1 | 30 | 115 | 26 | 112 | 1.38e-13 | 67.8 |
| MS.gene69547.t1 | MTR_6g051425 | 29.878 | 164 | 109 | 5 | 10 | 167 | 20 | 183 | 2.27e-13 | 72.0 |
| MS.gene69547.t1 | MTR_4g069880 | 48.387 | 62 | 32 | 0 | 4 | 65 | 7 | 68 | 1.22e-12 | 63.5 |
| MS.gene69547.t1 | MTR_4g040430 | 29.448 | 163 | 94 | 5 | 9 | 152 | 37 | 197 | 1.72e-12 | 67.0 |
| MS.gene69547.t1 | MTR_0337s0040 | 35.185 | 108 | 68 | 1 | 62 | 167 | 71 | 178 | 2.50e-12 | 67.4 |
| MS.gene69547.t1 | MTR_0337s0060 | 26.966 | 178 | 93 | 5 | 233 | 405 | 20 | 165 | 3.63e-11 | 63.9 |
| MS.gene69547.t1 | MTR_1g055240 | 33.333 | 108 | 70 | 1 | 62 | 167 | 21 | 128 | 5.84e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69547.t1 | AT3G22170 | 29.392 | 296 | 190 | 5 | 155 | 449 | 382 | 659 | 6.54e-33 | 135 |
| MS.gene69547.t1 | AT3G22170 | 29.392 | 296 | 190 | 5 | 155 | 449 | 382 | 659 | 6.54e-33 | 135 |
| MS.gene69547.t1 | AT4G15090 | 24.821 | 419 | 277 | 9 | 177 | 589 | 388 | 774 | 1.81e-30 | 127 |
| MS.gene69547.t1 | AT4G15090 | 24.821 | 419 | 277 | 9 | 177 | 589 | 388 | 774 | 1.81e-30 | 127 |
| MS.gene69547.t1 | AT4G15090 | 24.821 | 419 | 277 | 9 | 177 | 589 | 388 | 774 | 1.81e-30 | 127 |
| MS.gene69547.t1 | AT4G15090 | 24.821 | 419 | 277 | 9 | 177 | 589 | 388 | 774 | 1.81e-30 | 127 |
| MS.gene69547.t1 | AT4G15090 | 24.821 | 419 | 277 | 9 | 177 | 589 | 388 | 774 | 1.81e-30 | 127 |
| MS.gene69547.t1 | AT4G38180 | 30.962 | 239 | 146 | 4 | 176 | 406 | 411 | 638 | 7.26e-29 | 122 |
| MS.gene69547.t1 | AT4G38180 | 34.706 | 170 | 106 | 3 | 4 | 168 | 70 | 239 | 1.56e-19 | 93.6 |
| MS.gene69547.t1 | AT1G76320 | 27.215 | 316 | 206 | 7 | 155 | 470 | 310 | 601 | 3.33e-26 | 114 |
| MS.gene69547.t1 | AT1G76320 | 27.215 | 316 | 206 | 7 | 155 | 470 | 310 | 601 | 3.33e-26 | 114 |
| MS.gene69547.t1 | AT1G76320 | 27.215 | 316 | 206 | 7 | 155 | 470 | 310 | 601 | 3.56e-26 | 114 |
| MS.gene69547.t1 | AT1G76320 | 27.215 | 316 | 206 | 7 | 155 | 470 | 310 | 601 | 5.25e-26 | 113 |
| MS.gene69547.t1 | AT4G19990 | 29.667 | 300 | 191 | 6 | 167 | 459 | 326 | 612 | 1.98e-25 | 112 |
| MS.gene69547.t1 | AT4G19990 | 29.667 | 300 | 191 | 6 | 167 | 459 | 326 | 612 | 1.98e-25 | 112 |
| MS.gene69547.t1 | AT4G19990 | 29.667 | 300 | 191 | 6 | 167 | 459 | 326 | 612 | 2.26e-25 | 112 |
| MS.gene69547.t1 | AT4G19990 | 29.667 | 300 | 191 | 6 | 167 | 459 | 326 | 612 | 2.26e-25 | 112 |
| MS.gene69547.t1 | AT4G19990 | 29.667 | 300 | 191 | 6 | 167 | 459 | 269 | 555 | 2.32e-25 | 111 |
| MS.gene69547.t1 | AT4G19990 | 29.667 | 300 | 191 | 6 | 167 | 459 | 326 | 612 | 2.67e-25 | 111 |
| MS.gene69547.t1 | AT4G19990 | 29.667 | 300 | 191 | 6 | 167 | 459 | 340 | 626 | 3.07e-25 | 111 |
| MS.gene69547.t1 | AT4G38170 | 29.386 | 228 | 156 | 3 | 176 | 402 | 176 | 399 | 5.46e-25 | 109 |
| MS.gene69547.t1 | AT2G27110 | 27.007 | 274 | 190 | 5 | 175 | 447 | 357 | 621 | 5.20e-23 | 104 |
| MS.gene69547.t1 | AT2G27110 | 27.007 | 274 | 190 | 5 | 175 | 447 | 357 | 621 | 5.20e-23 | 104 |
| MS.gene69547.t1 | AT2G27110 | 27.007 | 274 | 190 | 5 | 175 | 447 | 212 | 476 | 5.51e-23 | 104 |
| MS.gene69547.t1 | AT5G18960 | 26.866 | 268 | 180 | 5 | 176 | 438 | 508 | 764 | 1.10e-22 | 103 |
| MS.gene69547.t1 | AT5G18960 | 26.866 | 268 | 180 | 5 | 176 | 438 | 508 | 764 | 1.10e-22 | 103 |
| MS.gene69547.t1 | AT2G32250 | 28.700 | 223 | 155 | 2 | 177 | 399 | 332 | 550 | 3.37e-22 | 102 |
| MS.gene69547.t1 | AT2G32250 | 28.700 | 223 | 155 | 2 | 177 | 399 | 332 | 550 | 3.37e-22 | 102 |
| MS.gene69547.t1 | AT2G32250 | 28.700 | 223 | 155 | 2 | 177 | 399 | 332 | 550 | 3.56e-22 | 102 |
| MS.gene69547.t1 | AT2G32250 | 28.700 | 223 | 155 | 2 | 177 | 399 | 332 | 550 | 3.56e-22 | 102 |
| MS.gene69547.t1 | AT2G32250 | 28.700 | 223 | 155 | 2 | 177 | 399 | 332 | 550 | 3.56e-22 | 102 |
| MS.gene69547.t1 | AT2G32250 | 28.700 | 223 | 155 | 2 | 177 | 399 | 291 | 509 | 3.61e-22 | 102 |
| MS.gene69547.t1 | AT2G32250 | 28.700 | 223 | 155 | 2 | 177 | 399 | 291 | 509 | 3.85e-22 | 101 |
| MS.gene69547.t1 | AT3G06250 | 27.622 | 286 | 190 | 6 | 159 | 438 | 466 | 740 | 4.30e-22 | 101 |
| MS.gene69547.t1 | AT3G06250 | 27.622 | 286 | 190 | 6 | 159 | 438 | 466 | 740 | 4.30e-22 | 101 |
| MS.gene69547.t1 | AT3G06250 | 27.622 | 286 | 190 | 6 | 159 | 438 | 466 | 740 | 4.30e-22 | 101 |
| MS.gene69547.t1 | AT2G32250 | 28.700 | 223 | 155 | 2 | 177 | 399 | 332 | 550 | 4.69e-22 | 101 |
| MS.gene69547.t1 | AT1G80010 | 23.188 | 276 | 198 | 8 | 177 | 445 | 433 | 701 | 3.17e-18 | 89.4 |
| MS.gene69547.t1 | AT1G52520 | 23.228 | 254 | 178 | 4 | 177 | 416 | 408 | 658 | 5.99e-15 | 79.0 |
| MS.gene69547.t1 | AT3G59470 | 43.000 | 100 | 54 | 3 | 7 | 104 | 70 | 168 | 5.45e-14 | 72.8 |
| MS.gene69547.t1 | AT3G59470 | 43.000 | 100 | 54 | 3 | 7 | 104 | 70 | 168 | 5.45e-14 | 72.8 |
| MS.gene69547.t1 | AT3G59470 | 43.000 | 100 | 54 | 3 | 7 | 104 | 82 | 180 | 7.64e-14 | 72.4 |
| MS.gene69547.t1 | AT1G10240 | 24.107 | 224 | 160 | 4 | 181 | 403 | 394 | 608 | 9.78e-14 | 75.1 |
| MS.gene69547.t1 | AT1G10240 | 24.107 | 224 | 160 | 4 | 181 | 403 | 394 | 608 | 9.78e-14 | 75.1 |
| MS.gene69547.t1 | AT5G28530 | 24.473 | 237 | 138 | 8 | 180 | 401 | 347 | 557 | 1.79e-12 | 70.9 |
| MS.gene69547.t1 | AT5G28530 | 24.473 | 237 | 138 | 8 | 180 | 401 | 410 | 620 | 2.45e-12 | 70.5 |
| MS.gene69547.t1 | AT3G07500 | 41.176 | 102 | 58 | 2 | 7 | 106 | 33 | 134 | 7.50e-12 | 65.9 |
| MS.gene69547.t1 | AT5G28530 | 24.473 | 237 | 134 | 9 | 180 | 401 | 347 | 553 | 3.90e-11 | 66.6 |
| MS.gene69547.t1 | AT5G28530 | 24.473 | 237 | 134 | 9 | 180 | 401 | 410 | 616 | 4.82e-11 | 66.2 |
| MS.gene69547.t1 | AT5G28530 | 24.473 | 237 | 134 | 9 | 180 | 401 | 410 | 616 | 4.82e-11 | 66.2 |
Find 104 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAAGAAAGGTGAATGTTTC+TGG | 0.143239 | 3.1:+33743217 | None:intergenic |
| GGCATCTTGTTACATGAAAA+AGG | 0.208783 | 3.1:-33743881 | MS.gene69547:CDS |
| TTGATGATGCTTGGAAGTTT+TGG | 0.231156 | 3.1:-33744994 | MS.gene69547:CDS |
| CCTTGCTTTGCAGTTGGTTC+TGG | 0.231162 | 3.1:+33744814 | None:intergenic |
| GACAACATATGAGTTGTTTC+TGG | 0.251212 | 3.1:+33744716 | None:intergenic |
| AATGCTACTTTATGTTCTTT+TGG | 0.263418 | 3.1:-33742653 | MS.gene69547:CDS |
| AAGGATAGGATTTAAGAATA+TGG | 0.268238 | 3.1:-33744795 | MS.gene69547:CDS |
| TTAAGAATATGGGTGGAGTT+TGG | 0.282368 | 3.1:-33744784 | MS.gene69547:CDS |
| TTTAAAAGTCTTTATTCATA+TGG | 0.318104 | 3.1:-33743419 | MS.gene69547:CDS |
| TTCTAAGTCTTGGTATCTTC+TGG | 0.326889 | 3.1:+33743695 | None:intergenic |
| AATGTCACTTTAAGCTCATT+TGG | 0.331866 | 3.1:-33742623 | MS.gene69547:CDS |
| CCAACACAAGTGGAGCTATT+TGG | 0.334884 | 3.1:-33742788 | MS.gene69547:CDS |
| ACGGCTTAGCCACTTCTTGC+AGG | 0.335704 | 3.1:-33744910 | MS.gene69547:CDS |
| TATGGAGGGAGAGTTGGATT+TGG | 0.335937 | 3.1:-33744965 | MS.gene69547:CDS |
| CATTCACACTTTCACTAAGT+TGG | 0.339000 | 3.1:+33743833 | None:intergenic |
| TTGGTTCTGGTCTCTGCTCT+TGG | 0.343862 | 3.1:+33744827 | None:intergenic |
| AATCAAATGAATTCCTTTGT+TGG | 0.345771 | 3.1:+33744630 | None:intergenic |
| TGACATTTGTCGCAATATTT+CGG | 0.347025 | 3.1:+33743663 | None:intergenic |
| AGATCTGTCCTCGCTATATC+AGG | 0.348981 | 3.1:-33743264 | MS.gene69547:CDS |
| TGTCGCAAGTTTGAGAGCTT+TGG | 0.350527 | 3.1:-33743460 | MS.gene69547:CDS |
| TTATGCAGAATGATGTTAGA+AGG | 0.352354 | 3.1:-33742875 | MS.gene69547:intron |
| TATACACTCTCAAGGAGAAA+TGG | 0.365393 | 3.1:-33743903 | MS.gene69547:CDS |
| TTTCTGGAGTGTGCATAATA+TGG | 0.369956 | 3.1:+33744732 | None:intergenic |
| TTCTGGCCTTCTACATCCTT+CGG | 0.374919 | 3.1:+33743234 | None:intergenic |
| ATCTCCTTGTAGCATTTCCT+TGG | 0.402674 | 3.1:+33743283 | None:intergenic |
| TGTACACAATAGATCTTTCA+TGG | 0.415897 | 3.1:-33742757 | MS.gene69547:intron |
| CAAACAACTCAAACTCATCT+TGG | 0.419070 | 3.1:+33743608 | None:intergenic |
| AGGTTTGTTTGTTGCAAAGA+AGG | 0.419137 | 3.1:-33744890 | MS.gene69547:CDS |
| TCCTATCCTTGCTTTGCAGT+TGG | 0.430816 | 3.1:+33744808 | None:intergenic |
| ATCCAACTCATCAGCAACTT+TGG | 0.438321 | 3.1:+33743195 | None:intergenic |
| ATTCACACTTTCACTAAGTT+GGG | 0.438879 | 3.1:+33743834 | None:intergenic |
| AAGAACAATTTGAAGAAGGT+TGG | 0.444968 | 3.1:-33743987 | MS.gene69547:CDS |
| ATTTCCATGGCTGAAAATCC+AGG | 0.446595 | 3.1:-33743532 | MS.gene69547:CDS |
| TACCAAAGTTGCTGATGAGT+TGG | 0.446669 | 3.1:-33743197 | MS.gene69547:CDS |
| GAGATCGGAAGTAGCATTGA+TGG | 0.446828 | 3.1:-33743100 | MS.gene69547:CDS |
| CTCTTCAAGATATAATGTTC+AGG | 0.446860 | 3.1:+33743382 | None:intergenic |
| TGAATCAAAGTGTGAATATG+AGG | 0.454849 | 3.1:-33743722 | MS.gene69547:CDS |
| ATACACTCTCAAGGAGAAAT+GGG | 0.458216 | 3.1:-33743902 | MS.gene69547:CDS |
| TCATGGCTAACATCAACAAT+AGG | 0.459450 | 3.1:+33743328 | None:intergenic |
| AAAAGCACAAATGGAGACTT+AGG | 0.461223 | 3.1:-33742837 | MS.gene69547:CDS |
| GACTTTAAGAAATGCATGTA+TGG | 0.461797 | 3.1:-33744021 | MS.gene69547:CDS |
| TGAAAATCCAGGGGAGTGGC+GGG | 0.463740 | 3.1:-33743521 | MS.gene69547:CDS |
| GAATATGAGTTTCTAAGTCT+TGG | 0.465418 | 3.1:+33743685 | None:intergenic |
| AATTGATTATGTTATTTCCA+TGG | 0.467396 | 3.1:-33743545 | MS.gene69547:CDS |
| ATCAGCAACTTTGGTAAGAA+AGG | 0.468458 | 3.1:+33743204 | None:intergenic |
| CCAAATAGCTCCACTTGTGT+TGG | 0.468525 | 3.1:+33742788 | None:intergenic |
| TGATTTGATGAGCAAGGAAG+TGG | 0.472654 | 3.1:-33744612 | MS.gene69547:CDS |
| AGGATAGGATTTAAGAATAT+GGG | 0.472781 | 3.1:-33744794 | MS.gene69547:CDS |
| TGAATTCCTTTGTTGGAGAC+CGG | 0.474040 | 3.1:+33744637 | None:intergenic |
| CTGAAAATCCAGGGGAGTGG+CGG | 0.476146 | 3.1:-33743522 | MS.gene69547:CDS |
| CAAATAGCTCCACTTGTGTT+GGG | 0.484329 | 3.1:+33742789 | None:intergenic |
| GTTGATTATGGAGGGAGAGT+TGG | 0.484337 | 3.1:-33744971 | MS.gene69547:CDS |
| GGACAAAGTCAGCAAGAAGC+GGG | 0.487089 | 3.1:-33743357 | MS.gene69547:CDS |
| CTTCGCAAAATTAAAGAGAT+CGG | 0.489208 | 3.1:-33743115 | MS.gene69547:CDS |
| TGCATAATATGGTTATGTTC+TGG | 0.490959 | 3.1:+33744743 | None:intergenic |
| TTGCCACCGAAGGATGTAGA+AGG | 0.496029 | 3.1:-33743240 | MS.gene69547:CDS |
| GACGAAGAACAATTTGAAGA+AGG | 0.497154 | 3.1:-33743991 | MS.gene69547:CDS |
| TGCTGATGAGTTGGATAGGC+TGG | 0.501292 | 3.1:-33743188 | MS.gene69547:CDS |
| ACCTTTGTTTGTGAAGCACT+TGG | 0.506363 | 3.1:+33742971 | None:intergenic |
| TTGATAGCTTTGATGATGCT+TGG | 0.507235 | 3.1:-33745003 | MS.gene69547:CDS |
| TTCTCCAAGGAAATGCTACA+AGG | 0.515443 | 3.1:-33743287 | MS.gene69547:CDS |
| TATGCAGAATGATGTTAGAA+GGG | 0.516550 | 3.1:-33742874 | MS.gene69547:intron |
| TTCATTTGATTTGATGAGCA+AGG | 0.524241 | 3.1:-33744618 | MS.gene69547:CDS |
| ATTCAACATCTTCAACATCA+TGG | 0.525492 | 3.1:+33743311 | None:intergenic |
| TAATTCACAAATGCAATATG+AGG | 0.531476 | 3.1:-33742814 | MS.gene69547:CDS |
| ATTGATCTAGCGGACGATGC+CGG | 0.533330 | 3.1:-33744656 | MS.gene69547:CDS |
| AGTGGGAGGTAGAACCAACT+TGG | 0.541339 | 3.1:-33744594 | MS.gene69547:CDS |
| TGTAAAATACAAGGACTACA+AGG | 0.543968 | 3.1:-33743953 | MS.gene69547:CDS |
| ATCTTGTGGTATCCTCATGT+AGG | 0.561243 | 3.1:+33742567 | None:intergenic |
| AACATTATATCTTGAAGAGG+TGG | 0.561823 | 3.1:-33743378 | MS.gene69547:CDS |
| CTATGGATTCATCAATCTTG+TGG | 0.565004 | 3.1:+33742553 | None:intergenic |
| GATGGTTCAACAACAGTCAA+GGG | 0.566352 | 3.1:-33743082 | MS.gene69547:CDS |
| ACGATGCCGGTCTCCAACAA+AGG | 0.570724 | 3.1:-33744643 | MS.gene69547:CDS |
| GAATATGGGTGGAGTTTGGA+CGG | 0.573195 | 3.1:-33744780 | MS.gene69547:CDS |
| GAAAAGAATATACACTCTCA+AGG | 0.574577 | 3.1:-33743911 | MS.gene69547:CDS |
| ACAAACAAACCTGCAAGAAG+TGG | 0.580136 | 3.1:+33744901 | None:intergenic |
| ATACAAGGACTACAAGGTTG+AGG | 0.585067 | 3.1:-33743947 | MS.gene69547:CDS |
| TGGCTGAAAATCCAGGGGAG+TGG | 0.585275 | 3.1:-33743525 | MS.gene69547:CDS |
| TATGAGGTGCCCAACACAAG+TGG | 0.585347 | 3.1:-33742798 | MS.gene69547:CDS |
| TGATGGTTCAACAACAGTCA+AGG | 0.586729 | 3.1:-33743083 | MS.gene69547:CDS |
| TGGCCTTCTACATCCTTCGG+TGG | 0.588154 | 3.1:+33743237 | None:intergenic |
| AGAGGTACAAAACGTCTCAA+AGG | 0.589980 | 3.1:-33743037 | MS.gene69547:CDS |
| GATTTGATGAGCAAGGAAGT+GGG | 0.590244 | 3.1:-33744611 | MS.gene69547:CDS |
| AAGGCGTATAAATCCCAAGT+TGG | 0.596512 | 3.1:+33744580 | None:intergenic |
| TTTCCATGGCTGAAAATCCA+GGG | 0.597156 | 3.1:-33743531 | MS.gene69547:CDS |
| TATGTACACAAGAATAAAGA+CGG | 0.602767 | 3.1:-33744929 | MS.gene69547:CDS |
| CTGAACATTATATCTTGAAG+AGG | 0.606368 | 3.1:-33743381 | MS.gene69547:CDS |
| AAACCTTCTTGTAAAATACA+AGG | 0.606557 | 3.1:-33743962 | MS.gene69547:CDS |
| TCCAAGTGCTTCACAAACAA+AGG | 0.608130 | 3.1:-33742972 | MS.gene69547:intron |
| CCAGAACCAACTGCAAAGCA+AGG | 0.609490 | 3.1:-33744814 | MS.gene69547:CDS |
| ATAGGATTTAAGAATATGGG+TGG | 0.612678 | 3.1:-33744791 | MS.gene69547:CDS |
| TATATCAGGATTGCCACCGA+AGG | 0.621760 | 3.1:-33743250 | MS.gene69547:CDS |
| ACCAACTGCAAAGCAAGGAT+AGG | 0.623297 | 3.1:-33744809 | MS.gene69547:CDS |
| ATGTCAACAAATTGATCTAG+CGG | 0.626650 | 3.1:-33744666 | MS.gene69547:CDS |
| TGGACAAAGTCAGCAAGAAG+CGG | 0.632418 | 3.1:-33743358 | MS.gene69547:CDS |
| AAGTTGCTGATGAGTTGGAT+AGG | 0.645499 | 3.1:-33743192 | MS.gene69547:CDS |
| ACAAGGTTGAGGAAAACACT+TGG | 0.647145 | 3.1:-33743936 | MS.gene69547:CDS |
| CAATAAGCTAGTAAAACTAG+TGG | 0.648351 | 3.1:+33742598 | None:intergenic |
| TTCCATGGCTGAAAATCCAG+GGG | 0.648695 | 3.1:-33743530 | MS.gene69547:CDS |
| GTGGGAGGTAGAACCAACTT+GGG | 0.659665 | 3.1:-33744593 | MS.gene69547:CDS |
| GACAAAGTCAGCAAGAAGCG+GGG | 0.678202 | 3.1:-33743356 | MS.gene69547:CDS |
| TTGATGAGCAAGGAAGTGGG+AGG | 0.684139 | 3.1:-33744608 | MS.gene69547:CDS |
| GTGGCAATCCTGATATAGCG+AGG | 0.688440 | 3.1:+33743256 | None:intergenic |
| ATTGATGGGAAACCTACATG+AGG | 0.691112 | 3.1:-33742579 | MS.gene69547:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAAAAGTCTTTATTCATA+TGG | - | chr3.1:33744174-33744193 | MS.gene69547:intron | 15.0% |
| !!! | AATATTTTTAATGTTTATGC+AGG | - | chr3.1:33744912-33744931 | MS.gene69547:CDS | 15.0% |
| !!! | AATTGATTATGTTATTTCCA+TGG | - | chr3.1:33744048-33744067 | MS.gene69547:intron | 20.0% |
| !!! | AGCTATTAAAAGTTTTATGA+AGG | - | chr3.1:33743784-33743803 | MS.gene69547:CDS | 20.0% |
| ! | AAACCTTCTTGTAAAATACA+AGG | - | chr3.1:33743631-33743650 | MS.gene69547:CDS | 25.0% |
| ! | AAGAATTATCTCCGAAAAAA+AGG | - | chr3.1:33743042-33743061 | MS.gene69547:CDS | 25.0% |
| ! | AAGGATAGGATTTAAGAATA+TGG | - | chr3.1:33742798-33742817 | MS.gene69547:CDS | 25.0% |
| ! | AAGGGATTTAAAAAGAAAGA+AGG | - | chr3.1:33744529-33744548 | MS.gene69547:intron | 25.0% |
| ! | AATCAAATGAATTCCTTTGT+TGG | + | chr3.1:33742966-33742985 | None:intergenic | 25.0% |
| ! | AGAATTATCTCCGAAAAAAA+GGG | - | chr3.1:33743043-33743062 | MS.gene69547:CDS | 25.0% |
| ! | AGGATAGGATTTAAGAATAT+GGG | - | chr3.1:33742799-33742818 | MS.gene69547:CDS | 25.0% |
| ! | TAATTCACAAATGCAATATG+AGG | - | chr3.1:33744779-33744798 | MS.gene69547:CDS | 25.0% |
| ! | TATGTACACAAGAATAAAGA+CGG | - | chr3.1:33742664-33742683 | MS.gene69547:intron | 25.0% |
| !! | ATGAAAAAGGCTTTTACATT+AGG | - | chr3.1:33743725-33743744 | MS.gene69547:CDS | 25.0% |
| !!! | AAACTTCTTTCCCTTTTTTT+CGG | + | chr3.1:33743056-33743075 | None:intergenic | 25.0% |
| !!! | AATGCTACTTTATGTTCTTT+TGG | - | chr3.1:33744940-33744959 | MS.gene69547:CDS | 25.0% |
| !!! | AGTTTTACTAGCTTATTGAT+GGG | - | chr3.1:33745000-33745019 | MS.gene69547:CDS | 25.0% |
| !!! | TAGTTTTACTAGCTTATTGA+TGG | - | chr3.1:33744999-33745018 | MS.gene69547:CDS | 25.0% |
| AAAAAGAAAGAAGGAAGAAG+AGG | - | chr3.1:33744538-33744557 | MS.gene69547:intron | 30.0% | |
| AAACAAAAGAGTCATACAAG+TGG | - | chr3.1:33743354-33743373 | MS.gene69547:CDS | 30.0% | |
| AACATTATATCTTGAAGAGG+TGG | - | chr3.1:33744215-33744234 | MS.gene69547:intron | 30.0% | |
| AAGAACAATTTGAAGAAGGT+TGG | - | chr3.1:33743606-33743625 | MS.gene69547:CDS | 30.0% | |
| ATAGGATTTAAGAATATGGG+TGG | - | chr3.1:33742802-33742821 | MS.gene69547:CDS | 30.0% | |
| ATCGTAAAACAGTGATCTTT+GGG | - | chr3.1:33743312-33743331 | MS.gene69547:CDS | 30.0% | |
| ATCTTCCATATCCATTTGAT+AGG | + | chr3.1:33743153-33743172 | None:intergenic | 30.0% | |
| ATGTCAACAAATTGATCTAG+CGG | - | chr3.1:33742927-33742946 | MS.gene69547:intron | 30.0% | |
| ATTCAACATCTTCAACATCA+TGG | + | chr3.1:33744285-33744304 | None:intergenic | 30.0% | |
| ATTCACACTTTCACTAAGTT+GGG | + | chr3.1:33743762-33743781 | None:intergenic | 30.0% | |
| ATTTGATAGGCATGATAGAA+AGG | + | chr3.1:33743140-33743159 | None:intergenic | 30.0% | |
| CAAAATGGTATCAAACACTT+GGG | - | chr3.1:33743515-33743534 | MS.gene69547:CDS | 30.0% | |
| CAATAAGCTAGTAAAACTAG+TGG | + | chr3.1:33744998-33745017 | None:intergenic | 30.0% | |
| CACTTGGGTAATTTAATGAA+AGG | - | chr3.1:33743530-33743549 | MS.gene69547:CDS | 30.0% | |
| CTCTTCAAGATATAATGTTC+AGG | + | chr3.1:33744214-33744233 | None:intergenic | 30.0% | |
| CTGAACATTATATCTTGAAG+AGG | - | chr3.1:33744212-33744231 | MS.gene69547:intron | 30.0% | |
| CTTCGCAAAATTAAAGAGAT+CGG | - | chr3.1:33744478-33744497 | MS.gene69547:intron | 30.0% | |
| GAAAAAAAGGGAAAGAAGTT+TGG | - | chr3.1:33743055-33743074 | MS.gene69547:CDS | 30.0% | |
| GAAAAGAATATACACTCTCA+AGG | - | chr3.1:33743682-33743701 | MS.gene69547:CDS | 30.0% | |
| GAATATGAGTTTCTAAGTCT+TGG | + | chr3.1:33743911-33743930 | None:intergenic | 30.0% | |
| TATGCAGAATGATGTTAGAA+GGG | - | chr3.1:33744719-33744738 | MS.gene69547:CDS | 30.0% | |
| TCCAACAGAAAGAAAAAAGA+TGG | - | chr3.1:33744598-33744617 | MS.gene69547:CDS | 30.0% | |
| TGAATCAAAGTGTGAATATG+AGG | - | chr3.1:33743871-33743890 | MS.gene69547:CDS | 30.0% | |
| TGACATTTGTCGCAATATTT+CGG | + | chr3.1:33743933-33743952 | None:intergenic | 30.0% | |
| TGATCAGTAAAAACAGTTTG+AGG | + | chr3.1:33743419-33743438 | None:intergenic | 30.0% | |
| TGCATAATATGGTTATGTTC+TGG | + | chr3.1:33742853-33742872 | None:intergenic | 30.0% | |
| TGGAATAGATCAAAAATAGC+AGG | + | chr3.1:33743968-33743987 | None:intergenic | 30.0% | |
| TGTAAAATACAAGGACTACA+AGG | - | chr3.1:33743640-33743659 | MS.gene69547:CDS | 30.0% | |
| TGTACACAATAGATCTTTCA+TGG | - | chr3.1:33744836-33744855 | MS.gene69547:CDS | 30.0% | |
| TTATGCAGAATGATGTTAGA+AGG | - | chr3.1:33744718-33744737 | MS.gene69547:CDS | 30.0% | |
| TTTCTATCATGCCTATCAAA+TGG | - | chr3.1:33743139-33743158 | MS.gene69547:CDS | 30.0% | |
| TTTGATAGGCATGATAGAAA+GGG | + | chr3.1:33743139-33743158 | None:intergenic | 30.0% | |
| ! | AAGATGTTGAATTTTCTCCA+AGG | - | chr3.1:33744293-33744312 | MS.gene69547:intron | 30.0% |
| ! | ACTACCAAAAAAAGCACAAA+TGG | - | chr3.1:33744747-33744766 | MS.gene69547:CDS | 30.0% |
| ! | AGTCCTTGTATTTTACAAGA+AGG | + | chr3.1:33743637-33743656 | None:intergenic | 30.0% |
| ! | CTCATTGATTATGGGTATTT+CGG | - | chr3.1:33743209-33743228 | MS.gene69547:CDS | 30.0% |
| ! | GACTTTAAGAAATGCATGTA+TGG | - | chr3.1:33743572-33743591 | MS.gene69547:CDS | 30.0% |
| ! | GGAGATAATTCTTTTGATCA+AGG | + | chr3.1:33743035-33743054 | None:intergenic | 30.0% |
| ! | GTTTTATAATCTCGTTTGTC+TGG | + | chr3.1:33742739-33742758 | None:intergenic | 30.0% |
| !! | AAAGTATTGTAACAGATAGC+CGG | + | chr3.1:33743093-33743112 | None:intergenic | 30.0% |
| !! | AAGTTTTATGAAGGTGAAGA+TGG | - | chr3.1:33743793-33743812 | MS.gene69547:CDS | 30.0% |
| !! | AATGTCACTTTAAGCTCATT+TGG | - | chr3.1:33744970-33744989 | MS.gene69547:CDS | 30.0% |
| !! | TTCATTTGATTTGATGAGCA+AGG | - | chr3.1:33742975-33742994 | MS.gene69547:CDS | 30.0% |
| !!! | ACCATCTTTTTTCTTTCTGT+TGG | + | chr3.1:33744602-33744621 | None:intergenic | 30.0% |
| !!! | CAAAAACCATGCCTTTTTTT+GGG | + | chr3.1:33742573-33742592 | None:intergenic | 30.0% |
| !!! | TCAAAAACCATGCCTTTTTT+TGG | + | chr3.1:33742574-33742593 | None:intergenic | 30.0% |
| AATCCTGAAAACACAGCTAA+TGG | + | chr3.1:33743284-33743303 | None:intergenic | 35.0% | |
| ATACACTCTCAAGGAGAAAT+GGG | - | chr3.1:33743691-33743710 | MS.gene69547:CDS | 35.0% | |
| ATCAAATTACCAACGTGTTC+TGG | - | chr3.1:33743171-33743190 | MS.gene69547:CDS | 35.0% | |
| ATCAGCAACTTTGGTAAGAA+AGG | + | chr3.1:33744392-33744411 | None:intergenic | 35.0% | |
| CAAACAACTCAAACTCATCT+TGG | + | chr3.1:33743988-33744007 | None:intergenic | 35.0% | |
| CATCGTAAAACAGTGATCTT+TGG | - | chr3.1:33743311-33743330 | MS.gene69547:CDS | 35.0% | |
| CATGGTAAGCTAATAGCAAT+TGG | - | chr3.1:33744854-33744873 | MS.gene69547:CDS | 35.0% | |
| CATTCACACTTTCACTAAGT+TGG | + | chr3.1:33743763-33743782 | None:intergenic | 35.0% | |
| CTATGGATTCATCAATCTTG+TGG | + | chr3.1:33745043-33745062 | None:intergenic | 35.0% | |
| GAAGATCAGAACCCAAAAAA+AGG | - | chr3.1:33742559-33742578 | MS.gene69547:CDS | 35.0% | |
| GACGAAGAACAATTTGAAGA+AGG | - | chr3.1:33743602-33743621 | MS.gene69547:CDS | 35.0% | |
| GCAAAATGGTATCAAACACT+TGG | - | chr3.1:33743514-33743533 | MS.gene69547:CDS | 35.0% | |
| GGCATCTTGTTACATGAAAA+AGG | - | chr3.1:33743712-33743731 | MS.gene69547:CDS | 35.0% | |
| GTAAGAAAGGTGAATGTTTC+TGG | + | chr3.1:33744379-33744398 | None:intergenic | 35.0% | |
| TACTGATCAAGATCAGTCAA+TGG | - | chr3.1:33743430-33743449 | MS.gene69547:CDS | 35.0% | |
| TATACACTCTCAAGGAGAAA+TGG | - | chr3.1:33743690-33743709 | MS.gene69547:CDS | 35.0% | |
| TCAAATTACCAACGTGTTCT+GGG | - | chr3.1:33743172-33743191 | MS.gene69547:CDS | 35.0% | |
| TCATGCCTATCAAATGGATA+TGG | - | chr3.1:33743145-33743164 | MS.gene69547:CDS | 35.0% | |
| TCATGGCTAACATCAACAAT+AGG | + | chr3.1:33744268-33744287 | None:intergenic | 35.0% | |
| TCGTAAAACAGTGATCTTTG+GGG | - | chr3.1:33743313-33743332 | MS.gene69547:CDS | 35.0% | |
| TTAAGAATATGGGTGGAGTT+TGG | - | chr3.1:33742809-33742828 | MS.gene69547:CDS | 35.0% | |
| TTCTAAGTCTTGGTATCTTC+TGG | + | chr3.1:33743901-33743920 | None:intergenic | 35.0% | |
| TTGATAGGCATGATAGAAAG+GGG | + | chr3.1:33743138-33743157 | None:intergenic | 35.0% | |
| ! | AAAAGCACAAATGGAGACTT+AGG | - | chr3.1:33744756-33744775 | MS.gene69547:CDS | 35.0% |
| ! | AGGTTTGTTTGTTGCAAAGA+AGG | - | chr3.1:33742703-33742722 | MS.gene69547:intron | 35.0% |
| ! | CAAAGATCACTGTTTTACGA+TGG | + | chr3.1:33743313-33743332 | None:intergenic | 35.0% |
| ! | CAAGGATGCTCATTGATTAT+GGG | - | chr3.1:33743201-33743220 | MS.gene69547:CDS | 35.0% |
| ! | GACAACATATGAGTTGTTTC+TGG | + | chr3.1:33742880-33742899 | None:intergenic | 35.0% |
| !! | TGATGATGCTTGGAAGTTTT+GGG | - | chr3.1:33742600-33742619 | MS.gene69547:CDS | 35.0% |
| !! | TTGATAGCTTTGATGATGCT+TGG | - | chr3.1:33742590-33742609 | MS.gene69547:CDS | 35.0% |
| !! | TTTCTGGAGTGTGCATAATA+TGG | + | chr3.1:33742864-33742883 | None:intergenic | 35.0% |
| !!! | AAGTTTTGGGTTGATTATGG+AGG | - | chr3.1:33742613-33742632 | MS.gene69547:CDS | 35.0% |
| !!! | AGTTTTGGGTTGATTATGGA+GGG | - | chr3.1:33742614-33742633 | MS.gene69547:CDS | 35.0% |
| !!! | GTCTCCATTTGTGCTTTTTT+TGG | + | chr3.1:33744754-33744773 | None:intergenic | 35.0% |
| !!! | TGGAAGTTTTGGGTTGATTA+TGG | - | chr3.1:33742610-33742629 | MS.gene69547:CDS | 35.0% |
| !!! | TTGATGATGCTTGGAAGTTT+TGG | - | chr3.1:33742599-33742618 | MS.gene69547:CDS | 35.0% |
| AAGGCGTATAAATCCCAAGT+TGG | + | chr3.1:33743016-33743035 | None:intergenic | 40.0% | |
| ACAAACAAACCTGCAAGAAG+TGG | + | chr3.1:33742695-33742714 | None:intergenic | 40.0% | |
| ACAAGGTTGAGGAAAACACT+TGG | - | chr3.1:33743657-33743676 | MS.gene69547:CDS | 40.0% | |
| ACGTGGCATTTGATGCAAAA+TGG | - | chr3.1:33743500-33743519 | MS.gene69547:CDS | 40.0% | |
| AGGGAAAGAAGTTTGGTACT+CGG | - | chr3.1:33743062-33743081 | MS.gene69547:CDS | 40.0% | |
| ATACAAGGACTACAAGGTTG+AGG | - | chr3.1:33743646-33743665 | MS.gene69547:CDS | 40.0% | |
| ATCCAACTCATCAGCAACTT+TGG | + | chr3.1:33744401-33744420 | None:intergenic | 40.0% | |
| ATCTCCTTGTAGCATTTCCT+TGG | + | chr3.1:33744313-33744332 | None:intergenic | 40.0% | |
| ATCTTGTGGTATCCTCATGT+AGG | + | chr3.1:33745029-33745048 | None:intergenic | 40.0% | |
| ATTGATGGGAAACCTACATG+AGG | - | chr3.1:33745014-33745033 | MS.gene69547:CDS | 40.0% | |
| ATTTCCATGGCTGAAAATCC+AGG | - | chr3.1:33744061-33744080 | MS.gene69547:intron | 40.0% | |
| CAAATAGCTCCACTTGTGTT+GGG | + | chr3.1:33744807-33744826 | None:intergenic | 40.0% | |
| GATGGTTCAACAACAGTCAA+GGG | - | chr3.1:33744511-33744530 | MS.gene69547:intron | 40.0% | |
| GATTTGATGAGCAAGGAAGT+GGG | - | chr3.1:33742982-33743001 | MS.gene69547:CDS | 40.0% | |
| TACCAAAGTTGCTGATGAGT+TGG | - | chr3.1:33744396-33744415 | MS.gene69547:intron | 40.0% | |
| TCAGAACCCAAAAAAAGGCA+TGG | - | chr3.1:33742564-33742583 | MS.gene69547:CDS | 40.0% | |
| TCCAAGTGCTTCACAAACAA+AGG | - | chr3.1:33744621-33744640 | MS.gene69547:CDS | 40.0% | |
| TGAATTCCTTTGTTGGAGAC+CGG | + | chr3.1:33742959-33742978 | None:intergenic | 40.0% | |
| TGATAGGCATGATAGAAAGG+GGG | + | chr3.1:33743137-33743156 | None:intergenic | 40.0% | |
| TGATGGTTCAACAACAGTCA+AGG | - | chr3.1:33744510-33744529 | MS.gene69547:intron | 40.0% | |
| TGATTTGATGAGCAAGGAAG+TGG | - | chr3.1:33742981-33743000 | MS.gene69547:CDS | 40.0% | |
| TTCTCCAAGGAAATGCTACA+AGG | - | chr3.1:33744306-33744325 | MS.gene69547:intron | 40.0% | |
| TTTCCATGGCTGAAAATCCA+GGG | - | chr3.1:33744062-33744081 | MS.gene69547:intron | 40.0% | |
| ! | AAGTTGCTGATGAGTTGGAT+AGG | - | chr3.1:33744401-33744420 | MS.gene69547:intron | 40.0% |
| ! | ACCTTTGTTTGTGAAGCACT+TGG | + | chr3.1:33744625-33744644 | None:intergenic | 40.0% |
| ! | AGACCATTAGCTGTGTTTTC+AGG | - | chr3.1:33743278-33743297 | MS.gene69547:CDS | 40.0% |
| ! | AGAGGTACAAAACGTCTCAA+AGG | - | chr3.1:33744556-33744575 | MS.gene69547:CDS | 40.0% |
| ! | AGATCACTGTTTTACGATGG+TGG | + | chr3.1:33743310-33743329 | None:intergenic | 40.0% |
| ! | GCAAGGATGCTCATTGATTA+TGG | - | chr3.1:33743200-33743219 | MS.gene69547:CDS | 40.0% |
| ACCAACTGCAAAGCAAGGAT+AGG | - | chr3.1:33742784-33742803 | MS.gene69547:CDS | 45.0% | |
| AGATCTGTCCTCGCTATATC+AGG | - | chr3.1:33744329-33744348 | MS.gene69547:intron | 45.0% | |
| CCAAATAGCTCCACTTGTGT+TGG | + | chr3.1:33744808-33744827 | None:intergenic | 45.0% | |
| CCAACACAAGTGGAGCTATT+TGG | - | chr3.1:33744805-33744824 | MS.gene69547:CDS | 45.0% | |
| GAATATGGGTGGAGTTTGGA+CGG | - | chr3.1:33742813-33742832 | MS.gene69547:CDS | 45.0% | |
| GCATCAAATGCCACGTACAT+AGG | + | chr3.1:33743496-33743515 | None:intergenic | 45.0% | |
| GGAAAGAAGTTTGGTACTCG+GGG | - | chr3.1:33743064-33743083 | MS.gene69547:CDS | 45.0% | |
| GGGAAAGAAGTTTGGTACTC+GGG | - | chr3.1:33743063-33743082 | MS.gene69547:CDS | 45.0% | |
| GTTATGCCTAGAGCATACCA+TGG | - | chr3.1:33743470-33743489 | MS.gene69547:CDS | 45.0% | |
| GTTGATTATGGAGGGAGAGT+TGG | - | chr3.1:33742622-33742641 | MS.gene69547:CDS | 45.0% | |
| TATATCAGGATTGCCACCGA+AGG | - | chr3.1:33744343-33744362 | MS.gene69547:intron | 45.0% | |
| TATGGAGGGAGAGTTGGATT+TGG | - | chr3.1:33742628-33742647 | MS.gene69547:CDS | 45.0% | |
| TCCTATCCTTGCTTTGCAGT+TGG | + | chr3.1:33742788-33742807 | None:intergenic | 45.0% | |
| TGGACAAAGTCAGCAAGAAG+CGG | - | chr3.1:33744235-33744254 | MS.gene69547:intron | 45.0% | |
| TGTCGCAAGTTTGAGAGCTT+TGG | - | chr3.1:33744133-33744152 | MS.gene69547:intron | 45.0% | |
| TTATGGGTATTTCGGTGACG+TGG | - | chr3.1:33743217-33743236 | MS.gene69547:CDS | 45.0% | |
| TTCCATGGCTGAAAATCCAG+GGG | - | chr3.1:33744063-33744082 | MS.gene69547:intron | 45.0% | |
| ! | GAGATCGGAAGTAGCATTGA+TGG | - | chr3.1:33744493-33744512 | MS.gene69547:intron | 45.0% |
| ! | TTCTGGCCTTCTACATCCTT+CGG | + | chr3.1:33744362-33744381 | None:intergenic | 45.0% |
| !!! | CTCGTTTGTCTGGTTTTCGT+AGG | + | chr3.1:33742729-33742748 | None:intergenic | 45.0% |
| !!! | GTGGCGGGTGTTTTTTGATT+TGG | - | chr3.1:33744087-33744106 | MS.gene69547:intron | 45.0% |
| AATGCCACGTACATAGGCCA+TGG | + | chr3.1:33743490-33743509 | None:intergenic | 50.0% | |
| AGTGGGAGGTAGAACCAACT+TGG | - | chr3.1:33742999-33743018 | MS.gene69547:CDS | 50.0% | |
| CATACCATGGCCTATGTACG+TGG | - | chr3.1:33743483-33743502 | MS.gene69547:CDS | 50.0% | |
| CATAGGCCATGGTATGCTCT+AGG | + | chr3.1:33743479-33743498 | None:intergenic | 50.0% | |
| CCAGAACCAACTGCAAAGCA+AGG | - | chr3.1:33742779-33742798 | MS.gene69547:CDS | 50.0% | |
| GACAAAGTCAGCAAGAAGCG+GGG | - | chr3.1:33744237-33744256 | MS.gene69547:intron | 50.0% | |
| GGACAAAGTCAGCAAGAAGC+GGG | - | chr3.1:33744236-33744255 | MS.gene69547:intron | 50.0% | |
| GTGGCAATCCTGATATAGCG+AGG | + | chr3.1:33744340-33744359 | None:intergenic | 50.0% | |
| GTGGGAGGTAGAACCAACTT+GGG | - | chr3.1:33743000-33743019 | MS.gene69547:CDS | 50.0% | |
| TTGATGAGCAAGGAAGTGGG+AGG | - | chr3.1:33742985-33743004 | MS.gene69547:CDS | 50.0% | |
| TTGCCACCGAAGGATGTAGA+AGG | - | chr3.1:33744353-33744372 | MS.gene69547:intron | 50.0% | |
| ! | ATTGATCTAGCGGACGATGC+CGG | - | chr3.1:33742937-33742956 | MS.gene69547:intron | 50.0% |
| ! | CCTTGCTTTGCAGTTGGTTC+TGG | + | chr3.1:33742782-33742801 | None:intergenic | 50.0% |
| ! | TATGAGGTGCCCAACACAAG+TGG | - | chr3.1:33744795-33744814 | MS.gene69547:CDS | 50.0% |
| ! | TGCTGATGAGTTGGATAGGC+TGG | - | chr3.1:33744405-33744424 | MS.gene69547:intron | 50.0% |
| !! | TTGGTTCTGGTCTCTGCTCT+TGG | + | chr3.1:33742769-33742788 | None:intergenic | 50.0% |
| ACGATGCCGGTCTCCAACAA+AGG | - | chr3.1:33742950-33742969 | MS.gene69547:intron | 55.0% | |
| ACGGCTTAGCCACTTCTTGC+AGG | - | chr3.1:33742683-33742702 | MS.gene69547:intron | 55.0% | |
| AGTTTGGTACTCGGGGAAGC+CGG | - | chr3.1:33743071-33743090 | MS.gene69547:CDS | 55.0% | |
| CTGAAAATCCAGGGGAGTGG+CGG | - | chr3.1:33744071-33744090 | MS.gene69547:intron | 55.0% | |
| TGAAAATCCAGGGGAGTGGC+GGG | - | chr3.1:33744072-33744091 | MS.gene69547:intron | 55.0% | |
| TGCATCTGCCCAGAACACGT+TGG | + | chr3.1:33743183-33743202 | None:intergenic | 55.0% | |
| TGGCCTTCTACATCCTTCGG+TGG | + | chr3.1:33744359-33744378 | None:intergenic | 55.0% | |
| TGGCTGAAAATCCAGGGGAG+TGG | - | chr3.1:33744068-33744087 | MS.gene69547:intron | 55.0% | |
| ! | ACGTGTTCTGGGCAGATGCA+AGG | - | chr3.1:33743183-33743202 | MS.gene69547:CDS | 55.0% |
| ! | CTCCCCTGGATTTTCAGCCA+TGG | + | chr3.1:33744068-33744087 | None:intergenic | 55.0% |
| AAAAACACCCGCCACTCCCC+TGG | + | chr3.1:33744082-33744101 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 33742553 | 33745062 | 33742553 | ID=MS.gene69547 |
| chr3.1 | mRNA | 33742553 | 33745062 | 33742553 | ID=MS.gene69547.t1;Parent=MS.gene69547 |
| chr3.1 | exon | 33744539 | 33745062 | 33744539 | ID=MS.gene69547.t1.exon1;Parent=MS.gene69547.t1 |
| chr3.1 | CDS | 33744539 | 33745062 | 33744539 | ID=cds.MS.gene69547.t1;Parent=MS.gene69547.t1 |
| chr3.1 | exon | 33742973 | 33744044 | 33742973 | ID=MS.gene69547.t1.exon2;Parent=MS.gene69547.t1 |
| chr3.1 | CDS | 33742973 | 33744044 | 33742973 | ID=cds.MS.gene69547.t1;Parent=MS.gene69547.t1 |
| chr3.1 | exon | 33742758 | 33742889 | 33742758 | ID=MS.gene69547.t1.exon3;Parent=MS.gene69547.t1 |
| chr3.1 | CDS | 33742758 | 33742889 | 33742758 | ID=cds.MS.gene69547.t1;Parent=MS.gene69547.t1 |
| chr3.1 | exon | 33742553 | 33742681 | 33742553 | ID=MS.gene69547.t1.exon4;Parent=MS.gene69547.t1 |
| chr3.1 | CDS | 33742553 | 33742681 | 33742553 | ID=cds.MS.gene69547.t1;Parent=MS.gene69547.t1 |
| Gene Sequence |
| Protein sequence |
