Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69697.t1 | XP_013461072.1 | 94.7 | 547 | 16 | 4 | 1 | 544 | 9 | 545 | 1.40E-297 | 1031.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69697.t1 | O24606 | 62.5 | 550 | 178 | 9 | 1 | 544 | 6 | 533 | 2.4e-186 | 653.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69697.t1 | D0EXG5 | 94.7 | 547 | 16 | 4 | 1 | 544 | 9 | 545 | 9.7e-298 | 1031.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene69697.t1 | TF | EIL |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69697.t1 | MTR_3g078770 | 94.698 | 547 | 16 | 4 | 1 | 544 | 9 | 545 | 0.0 | 1060 |
| MS.gene69697.t1 | MTR_5g087790 | 72.578 | 547 | 137 | 10 | 1 | 540 | 7 | 547 | 0.0 | 792 |
| MS.gene69697.t1 | MTR_2g098470 | 63.399 | 306 | 98 | 4 | 33 | 326 | 27 | 330 | 6.52e-131 | 395 |
| MS.gene69697.t1 | MTR_3g087530 | 63.953 | 258 | 82 | 4 | 41 | 293 | 29 | 280 | 2.25e-113 | 343 |
| MS.gene69697.t1 | MTR_6g060600 | 38.370 | 503 | 264 | 9 | 18 | 512 | 17 | 481 | 1.11e-111 | 347 |
| MS.gene69697.t1 | MTR_6g460640 | 51.667 | 300 | 134 | 4 | 32 | 326 | 31 | 324 | 1.68e-108 | 338 |
| MS.gene69697.t1 | MTR_8g091370 | 60.232 | 259 | 97 | 3 | 38 | 293 | 16 | 271 | 8.20e-107 | 327 |
| MS.gene69697.t1 | MTR_3g010790 | 52.000 | 250 | 116 | 2 | 98 | 343 | 1 | 250 | 5.49e-90 | 285 |
| MS.gene69697.t1 | MTR_1g024420 | 44.660 | 103 | 55 | 1 | 40 | 140 | 6 | 108 | 6.98e-27 | 105 |
| MS.gene69697.t1 | MTR_7g095580 | 43.269 | 104 | 47 | 3 | 87 | 181 | 1 | 101 | 8.36e-19 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69697.t1 | AT3G20770 | 62.956 | 548 | 175 | 10 | 1 | 542 | 6 | 531 | 0.0 | 668 |
| MS.gene69697.t1 | AT2G27050 | 60.323 | 557 | 165 | 15 | 1 | 536 | 7 | 528 | 0.0 | 622 |
| MS.gene69697.t1 | AT1G73730 | 62.541 | 307 | 93 | 6 | 35 | 326 | 17 | 316 | 1.98e-127 | 384 |
| MS.gene69697.t1 | AT1G73730 | 62.541 | 307 | 93 | 6 | 35 | 326 | 29 | 328 | 2.09e-127 | 384 |
| MS.gene69697.t1 | AT5G21120 | 47.260 | 438 | 177 | 12 | 9 | 428 | 15 | 416 | 1.42e-119 | 362 |
| MS.gene69697.t1 | AT5G21120 | 47.260 | 438 | 177 | 12 | 9 | 428 | 15 | 416 | 1.42e-119 | 362 |
| MS.gene69697.t1 | AT5G21120 | 47.260 | 438 | 177 | 12 | 9 | 428 | 22 | 423 | 1.76e-119 | 362 |
| MS.gene69697.t1 | AT5G65100 | 44.208 | 423 | 191 | 11 | 39 | 424 | 33 | 447 | 1.43e-106 | 330 |
| MS.gene69697.t1 | AT5G10120 | 57.634 | 262 | 108 | 1 | 35 | 293 | 14 | 275 | 1.39e-104 | 322 |
Find 187 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTACAAGCTTGCGAATTT+TGG | 0.116142 | 3.2:-69675725 | None:intergenic |
| GGCTCTTCTTCATCTGATTT+TGG | 0.161207 | 3.2:+69676225 | MS.gene69697:CDS |
| ATCTTTCGGTAAACCGATTT+GGG | 0.200055 | 3.2:-69675605 | None:intergenic |
| CCAAGCTGACAATGCAATTC+CGG | 0.279173 | 3.2:+69675399 | MS.gene69697:CDS |
| GATCTTTCGGTAAACCGATT+TGG | 0.301097 | 3.2:-69675606 | None:intergenic |
| CCGATGTGAGCTTGGCTATA+AGG | 0.303939 | 3.2:-69676150 | None:intergenic |
| AATGGCTCAGCCGGTTAATA+TGG | 0.309330 | 3.2:+69676317 | MS.gene69697:CDS |
| GGTCACAGGCTTTCCTTTCT+CGG | 0.320948 | 3.2:-69675296 | None:intergenic |
| ACCGGCTGAGCCATTGGTTT+CGG | 0.323642 | 3.2:-69676309 | None:intergenic |
| GGTGCTTCTCAAGCGATTAA+AGG | 0.326570 | 3.2:+69675111 | MS.gene69697:CDS |
| GTCAGCTTGGTACTTGGATA+TGG | 0.327342 | 3.2:-69675386 | None:intergenic |
| CGTTCCTCCACATCAAAATT+CGG | 0.328270 | 3.2:-69675931 | None:intergenic |
| AGGCTCAAGGGTTTGTTTAC+GGG | 0.333360 | 3.2:+69675266 | MS.gene69697:CDS |
| CCAAAATTCGCAAGCTTGTA+AGG | 0.334057 | 3.2:+69675725 | MS.gene69697:CDS |
| AAGGCTCAAGGGTTTGTTTA+CGG | 0.347915 | 3.2:+69675265 | MS.gene69697:CDS |
| GGCGGAGGACCTTGATCTTT+CGG | 0.355023 | 3.2:-69675619 | None:intergenic |
| CCTCCTCCATGGTGGCCTAC+AGG | 0.364645 | 3.2:+69675565 | MS.gene69697:CDS |
| GATGAAGAAGAGCCTCTATA+TGG | 0.374646 | 3.2:-69676216 | None:intergenic |
| AAAGGTCCAGCTGCGACAAA+TGG | 0.377442 | 3.2:-69675859 | None:intergenic |
| TTGATTGACGATTGCAAGCC+AGG | 0.380797 | 3.2:-69675794 | None:intergenic |
| GTCACAGGCTTTCCTTTCTC+GGG | 0.386577 | 3.2:-69675295 | None:intergenic |
| TTCTTCATCAATCCAACATT+GGG | 0.399620 | 3.2:+69675968 | MS.gene69697:CDS |
| GAGGAGGATGTGGAGGGATA+AGG | 0.401050 | 3.2:+69675090 | MS.gene69697:CDS |
| TGCATTGTCAGCTTGGTACT+TGG | 0.401725 | 3.2:-69675392 | None:intergenic |
| CCACCTTCCATCGATATAAC+TGG | 0.402818 | 3.2:+69676342 | MS.gene69697:CDS |
| AGATCATGAGGTTTCTTGTA+AGG | 0.405253 | 3.2:-69675640 | None:intergenic |
| ATTGCGAAAGTCTGCTGAAA+TGG | 0.405530 | 3.2:-69676021 | None:intergenic |
| TTTCCTCCTTGCCTGTTCCT+GGG | 0.410461 | 3.2:-69675182 | None:intergenic |
| CAAGCTGACAATGCAATTCC+GGG | 0.413671 | 3.2:+69675400 | MS.gene69697:CDS |
| AAGGTCCAGCTGCGACAAAT+GGG | 0.416033 | 3.2:-69675858 | None:intergenic |
| TTTGTCGCAGCTGGACCTTT+CGG | 0.419285 | 3.2:+69675862 | MS.gene69697:CDS |
| TTGCCTCTGCTTGGCCGCAT+CGG | 0.422356 | 3.2:-69675158 | None:intergenic |
| TCGCCTCAGGTTCAGTTAGC+CGG | 0.423673 | 3.2:-69675018 | None:intergenic |
| GATTGATGAAGAAGATTCTC+AGG | 0.425025 | 3.2:-69675958 | None:intergenic |
| TCAATCCAACATTGGGATGA+TGG | 0.429901 | 3.2:+69675975 | MS.gene69697:CDS |
| CCGGAATTGCATTGTCAGCT+TGG | 0.430474 | 3.2:-69675399 | None:intergenic |
| GCCGCATCGGATCCTTCCTT+CGG | 0.430698 | 3.2:-69675145 | None:intergenic |
| GATCATGAGATGGCTCTATC+TGG | 0.431769 | 3.2:+69674941 | None:intergenic |
| GGCAACATGAATTTAACTTC+TGG | 0.433244 | 3.2:+69676435 | MS.gene69697:CDS |
| CCCTCAGAGGCGGTTTCCAT+TGG | 0.434105 | 3.2:+69675531 | MS.gene69697:CDS |
| ACCTCATTAGCATGAAAACT+TGG | 0.436185 | 3.2:-69676252 | None:intergenic |
| TTCCTGGGATTGCCTCTGCT+TGG | 0.439634 | 3.2:-69675167 | None:intergenic |
| GCAGCTCTTGCAAGGTGTGA+GGG | 0.439936 | 3.2:-69675456 | None:intergenic |
| CCGCGAATGGTGGAAGGATA+AGG | 0.449952 | 3.2:+69675336 | MS.gene69697:CDS |
| GCAGAGGCAATCCCAGGAAC+AGG | 0.451574 | 3.2:+69675171 | MS.gene69697:CDS |
| CTCCTCCATGGTGGCCTACA+GGG | 0.453443 | 3.2:+69675566 | MS.gene69697:CDS |
| CCTTATCCTTCCACCATTCG+CGG | 0.453482 | 3.2:-69675336 | None:intergenic |
| GTGAGGAAGCGGAAGATCTC+TGG | 0.455579 | 3.2:+69676075 | MS.gene69697:CDS |
| TACGGGATCATTCCCGAGAA+AGG | 0.459725 | 3.2:+69675283 | MS.gene69697:CDS |
| GAAGGTGGAACCATATTAAC+CGG | 0.463028 | 3.2:-69676327 | None:intergenic |
| CTTCTTCATCAATCCAACAT+TGG | 0.463424 | 3.2:+69675967 | MS.gene69697:CDS |
| AGCAGCATGAGAATTACTTC+AGG | 0.465101 | 3.2:+69676514 | MS.gene69697:CDS |
| TCAGCAGACTTTCGCAATGA+AGG | 0.468808 | 3.2:+69676026 | MS.gene69697:CDS |
| TGCAGCTCTTGCAAGGTGTG+AGG | 0.478278 | 3.2:-69675457 | None:intergenic |
| GAGAAAGGAAAGCCTGTGAC+CGG | 0.478282 | 3.2:+69675298 | MS.gene69697:CDS |
| ATATTAACCGGCTGAGCCAT+TGG | 0.478420 | 3.2:-69676315 | None:intergenic |
| GTATCCCTAGAAGCCCTGTC+TGG | 0.478900 | 3.2:-69676177 | None:intergenic |
| GTCTATGATTCAGATATTCA+AGG | 0.479340 | 3.2:+69676414 | MS.gene69697:CDS |
| TCACACCTTGCAAGAGCTGC+AGG | 0.479872 | 3.2:+69675459 | MS.gene69697:CDS |
| CGCCTCAGGTTCAGTTAGCC+GGG | 0.481589 | 3.2:-69675017 | None:intergenic |
| GATGGCTCTATCTGGTGATC+TGG | 0.482695 | 3.2:+69674949 | None:intergenic |
| TCTTGCAAGGTGTGAGGGGT+TGG | 0.482958 | 3.2:-69675451 | None:intergenic |
| GCTCCCCAACCCCAAGTTGA+GGG | 0.486678 | 3.2:+69674983 | MS.gene69697:CDS |
| TGCTCCCCAACCCCAAGTTG+AGG | 0.487998 | 3.2:+69674982 | MS.gene69697:CDS |
| TCCTTCCCTGTAGGCCACCA+TGG | 0.488917 | 3.2:-69675571 | None:intergenic |
| CTCTGGTGAATTTAACATGA+TGG | 0.489439 | 3.2:+69676092 | MS.gene69697:CDS |
| GAGAATTACTTCAGGGGTCA+AGG | 0.490089 | 3.2:+69676522 | MS.gene69697:CDS |
| CATGCCTTCTTCAGATCATG+AGG | 0.490321 | 3.2:-69675652 | None:intergenic |
| GGCCAAGCAGAGGCAATCCC+AGG | 0.494536 | 3.2:+69675165 | MS.gene69697:CDS |
| TTTCTGAAGATGGTGAGAAA+AGG | 0.494881 | 3.2:+69676373 | MS.gene69697:CDS |
| CCAATGGAAACCGCCTCTGA+GGG | 0.495394 | 3.2:-69675531 | None:intergenic |
| CCGAGCTTGAGAGGAGGATG+TGG | 0.496132 | 3.2:+69675080 | MS.gene69697:CDS |
| AATGGTGGAAGGATAAGGTT+AGG | 0.496339 | 3.2:+69675341 | MS.gene69697:CDS |
| GCAATTCCGGGGAAGAATGA+TGG | 0.501691 | 3.2:+69675412 | MS.gene69697:CDS |
| CGGATAATCTCCGCGAATGG+TGG | 0.504192 | 3.2:+69675326 | MS.gene69697:CDS |
| ACCGAAACCAATGGCTCAGC+CGG | 0.505945 | 3.2:+69676308 | MS.gene69697:CDS |
| TCTTCGTCAACCATCGCCTC+AGG | 0.506692 | 3.2:-69675031 | None:intergenic |
| GGACTTGGAGTTTCTGAAGA+TGG | 0.507451 | 3.2:+69676363 | MS.gene69697:CDS |
| CTGAAGAAGGCATGGAAGGT+TGG | 0.507865 | 3.2:+69675661 | MS.gene69697:CDS |
| TTATCCGATGCCCCGGTCAC+AGG | 0.510724 | 3.2:-69675310 | None:intergenic |
| TCTCTCCATCATCCCAATGT+TGG | 0.511441 | 3.2:-69675980 | None:intergenic |
| AGAAGGGTGTTCCTCCTCCA+TGG | 0.516637 | 3.2:+69675554 | MS.gene69697:CDS |
| ATGGAGGTTTGCAAGGCTCA+AGG | 0.517295 | 3.2:+69675253 | MS.gene69697:CDS |
| GGAAGAGGCTGTGACCAACT+TGG | 0.519473 | 3.2:+69676047 | MS.gene69697:CDS |
| AGGATAAAGCTCCCGCGCTA+AGG | 0.520455 | 3.2:-69675824 | None:intergenic |
| GAGCTGCAGGACACAACCTT+GGG | 0.520799 | 3.2:+69675472 | MS.gene69697:CDS |
| ACTTGGATTTCGTGAGGAAG+CGG | 0.521923 | 3.2:+69676064 | MS.gene69697:CDS |
| CAATTGAGTTGTCCATATAG+AGG | 0.522292 | 3.2:+69676204 | MS.gene69697:CDS |
| AAAGCCTGTGACCGGGGCAT+CGG | 0.525234 | 3.2:+69675306 | MS.gene69697:CDS |
| GGACCTTTCGGCATCAATGA+AGG | 0.525234 | 3.2:+69675874 | MS.gene69697:CDS |
| AGAAAGGAAAGCCTGTGACC+GGG | 0.526532 | 3.2:+69675299 | MS.gene69697:CDS |
| TGTGTCCTGCAGCTCTTGCA+AGG | 0.529578 | 3.2:-69675464 | None:intergenic |
| ATCGGTTTACCGAAAGATCA+AGG | 0.532949 | 3.2:+69675610 | MS.gene69697:CDS |
| GAGGCGGTTTCCATTGGAGA+AGG | 0.533081 | 3.2:+69675537 | MS.gene69697:CDS |
| CTGGAAAACCGATGTGAGCT+TGG | 0.533885 | 3.2:-69676158 | None:intergenic |
| GAAGAGTGGTGGCCCCAAAT+CGG | 0.536945 | 3.2:+69675592 | MS.gene69697:CDS |
| CGGCTAAGGAAAGTGCAACC+TGG | 0.537233 | 3.2:+69675776 | MS.gene69697:CDS |
| TCAAGATAAAATGACGGCTA+AGG | 0.537615 | 3.2:+69675762 | MS.gene69697:CDS |
| TGAGGTTTCTTGTAAGGCGG+AGG | 0.540347 | 3.2:-69675634 | None:intergenic |
| GAAGTACATGCTGAAAATGA+TGG | 0.543075 | 3.2:+69675234 | MS.gene69697:CDS |
| GTGTGAGGGGTTGGACCGAT+CGG | 0.543206 | 3.2:-69675442 | None:intergenic |
| GAAAGGAAAGCCTGTGACCG+GGG | 0.544653 | 3.2:+69675300 | MS.gene69697:CDS |
| GACTTTCGCAATGAAGGAAG+AGG | 0.546905 | 3.2:+69676032 | MS.gene69697:CDS |
| TTGCCTCCATCATTCTTCCC+CGG | 0.547718 | 3.2:-69675418 | None:intergenic |
| CTCATGATCTGAAGAAGGCA+TGG | 0.547916 | 3.2:+69675653 | MS.gene69697:CDS |
| TTGATGTTGCCGAGCTTGAG+AGG | 0.548157 | 3.2:+69675071 | MS.gene69697:CDS |
| GCAATGAGTATGATGTCGAT+GGG | 0.548446 | 3.2:+69675896 | MS.gene69697:CDS |
| GAAACCTCATGATCTGAAGA+AGG | 0.550430 | 3.2:+69675648 | MS.gene69697:CDS |
| TGGTACTTGGATATGGCAGC+AGG | 0.551180 | 3.2:-69675379 | None:intergenic |
| AGAGCTGCAGGACACAACCT+TGG | 0.551353 | 3.2:+69675471 | MS.gene69697:CDS |
| GCAGCATGAGAATTACTTCA+GGG | 0.554925 | 3.2:+69676515 | MS.gene69697:CDS |
| TAATCTCCGCGAATGGTGGA+AGG | 0.556888 | 3.2:+69675330 | MS.gene69697:CDS |
| CACCACTCTTCCTTCCCTGT+AGG | 0.558000 | 3.2:-69675580 | None:intergenic |
| AGCTTGAGAGGAGGATGTGG+AGG | 0.561978 | 3.2:+69675083 | MS.gene69697:CDS |
| TGCAGATAAGAGAGAACCCA+AGG | 0.562468 | 3.2:-69675488 | None:intergenic |
| TCCAAGTCCAGTTATATCGA+TGG | 0.562663 | 3.2:-69676349 | None:intergenic |
| CCTGTAGGCCACCATGGAGG+AGG | 0.564770 | 3.2:-69675565 | None:intergenic |
| GGCAATCCCAGGAACAGGCA+AGG | 0.565695 | 3.2:+69675176 | MS.gene69697:CDS |
| TCCAATGGAAACCGCCTCTG+AGG | 0.567003 | 3.2:-69675532 | None:intergenic |
| CAGCTCTTGCAAGGTGTGAG+GGG | 0.568677 | 3.2:-69675455 | None:intergenic |
| TGGAGGTTTGCAAGGCTCAA+GGG | 0.571141 | 3.2:+69675254 | MS.gene69697:CDS |
| TGATCTGAAGAAGGCATGGA+AGG | 0.572466 | 3.2:+69675657 | MS.gene69697:CDS |
| GGCCTACAGGGAAGGAAGAG+TGG | 0.575468 | 3.2:+69675578 | MS.gene69697:CDS |
| TCCATCGATATAACTGGACT+TGG | 0.575840 | 3.2:+69676348 | MS.gene69697:CDS |
| GGTCCAGCTGCGACAAATGG+GGG | 0.576693 | 3.2:-69675856 | None:intergenic |
| TTACTTCAGGGGTCAAGGAA+TGG | 0.577986 | 3.2:+69676527 | MS.gene69697:CDS |
| GATCCGATGCGGCCAAGCAG+AGG | 0.578212 | 3.2:+69675155 | MS.gene69697:CDS |
| GGAGGAACACCCTTCTCCAA+TGG | 0.579400 | 3.2:-69675547 | None:intergenic |
| AGGTCCAGCTGCGACAAATG+GGG | 0.579864 | 3.2:-69675857 | None:intergenic |
| GCTAACTGAACCTGAGGCGA+TGG | 0.580269 | 3.2:+69675021 | MS.gene69697:CDS |
| CTCCCCAACCCCAAGTTGAG+GGG | 0.581721 | 3.2:+69674984 | MS.gene69697:CDS |
| CTTCCTCACGAAATCCAAGT+TGG | 0.583208 | 3.2:-69676061 | None:intergenic |
| TGCTGAATGCTGCTAGCTTG+CGG | 0.585537 | 3.2:-69676492 | None:intergenic |
| AATGGAAACCGCCTCTGAGG+GGG | 0.586396 | 3.2:-69675529 | None:intergenic |
| TCAAGAGGAGGCCTTAGCGC+GGG | 0.589414 | 3.2:+69675813 | MS.gene69697:CDS |
| TCCATGGTGGCCTACAGGGA+AGG | 0.589968 | 3.2:+69675570 | MS.gene69697:CDS |
| GAAAATGATGGAGGTTTGCA+AGG | 0.591397 | 3.2:+69675246 | MS.gene69697:CDS |
| AAGATGTCAAGGGCTCAAGA+TGG | 0.596334 | 3.2:+69675205 | MS.gene69697:CDS |
| GGTCAAGGAATGGTGATGGA+AGG | 0.597963 | 3.2:+69676537 | MS.gene69697:CDS |
| CAGGGGTCAAGGAATGGTGA+TGG | 0.599899 | 3.2:+69676533 | MS.gene69697:CDS |
| TTGCCTTCATTGATGCCGAA+AGG | 0.600278 | 3.2:-69675877 | None:intergenic |
| GAAGATGGTGAGAAAAGGAT+TGG | 0.601828 | 3.2:+69676378 | MS.gene69697:CDS |
| GAGCAAGTCAAACCGAAGGA+AGG | 0.602432 | 3.2:+69675133 | MS.gene69697:CDS |
| AAGGTTAGGTTTGACCGCAA+CGG | 0.602662 | 3.2:+69675355 | MS.gene69697:CDS |
| AATGACTGAGGATATATGAC+TGG | 0.604420 | 3.2:-69676279 | None:intergenic |
| CCAGTTATATCGATGGAAGG+TGG | 0.610149 | 3.2:-69676342 | None:intergenic |
| TCCCCAACCCCAAGTTGAGG+GGG | 0.613156 | 3.2:+69674985 | MS.gene69697:CDS |
| CGCCCGGCTAACTGAACCTG+AGG | 0.614118 | 3.2:+69675015 | MS.gene69697:CDS |
| CCACATCCTCCTCTCAAGCT+CGG | 0.615219 | 3.2:-69675080 | None:intergenic |
| GGCAATGAGTATGATGTCGA+TGG | 0.618237 | 3.2:+69675895 | MS.gene69697:CDS |
| AGGCGGTTTCCATTGGAGAA+GGG | 0.619284 | 3.2:+69675538 | MS.gene69697:CDS |
| CATCGGATAATCTCCGCGAA+TGG | 0.620613 | 3.2:+69675323 | MS.gene69697:CDS |
| TCTTTCGGTAAACCGATTTG+GGG | 0.621358 | 3.2:-69675604 | None:intergenic |
| GCGGAGATTATCCGATGCCC+CGG | 0.628966 | 3.2:-69675317 | None:intergenic |
| TCATGAGGTTTCTTGTAAGG+CGG | 0.630329 | 3.2:-69675637 | None:intergenic |
| AATGATGGAGGCAATCCGAT+CGG | 0.634526 | 3.2:+69675427 | MS.gene69697:CDS |
| GCTTGCAATCGTCAATCAAG+AGG | 0.634856 | 3.2:+69675798 | MS.gene69697:CDS |
| ATCAAGAGGAGGCCTTAGCG+CGG | 0.637665 | 3.2:+69675812 | MS.gene69697:CDS |
| GCTTGAGAGGAGGATGTGGA+GGG | 0.637705 | 3.2:+69675084 | MS.gene69697:CDS |
| TGACCAACTTGGATTTCGTG+AGG | 0.639847 | 3.2:+69676058 | MS.gene69697:CDS |
| TGCAATCGTCAATCAAGAGG+AGG | 0.640235 | 3.2:+69675801 | MS.gene69697:CDS |
| CCTTATAGCCAAGCTCACAT+CGG | 0.641231 | 3.2:+69676150 | MS.gene69697:CDS |
| ATTCGTTCAACCGAAACCAA+TGG | 0.641894 | 3.2:+69676299 | MS.gene69697:CDS |
| AGTCCAGTTATATCGATGGA+AGG | 0.642356 | 3.2:-69676345 | None:intergenic |
| ATGCCTTCAAGATAAAATGA+CGG | 0.643938 | 3.2:+69675756 | MS.gene69697:CDS |
| AAAGGAGCAAGTCAAACCGA+AGG | 0.648111 | 3.2:+69675129 | MS.gene69697:CDS |
| GATGGTGAGAAAAGGATTGG+TGG | 0.649012 | 3.2:+69676381 | MS.gene69697:CDS |
| ATATGGCAGCAGGACCGTTG+CGG | 0.650469 | 3.2:-69675369 | None:intergenic |
| TATAAGGACATGTTGAGTGT+TGG | 0.651109 | 3.2:-69676134 | None:intergenic |
| AGGGTGTTCCTCCTCCATGG+TGG | 0.653236 | 3.2:+69675557 | MS.gene69697:CDS |
| TTCGGTTGAACGAATGACTG+AGG | 0.658942 | 3.2:-69676291 | None:intergenic |
| CAATGGAAACCGCCTCTGAG+GGG | 0.659298 | 3.2:-69675530 | None:intergenic |
| GTCCAGCTGCGACAAATGGG+GGG | 0.662952 | 3.2:-69675855 | None:intergenic |
| CTACAGGGAAGGAAGAGTGG+TGG | 0.665816 | 3.2:+69675581 | MS.gene69697:CDS |
| CAATGAGTATGATGTCGATG+GGG | 0.670997 | 3.2:+69675897 | MS.gene69697:CDS |
| AATGAGTATGATGTCGATGG+GGG | 0.671000 | 3.2:+69675898 | MS.gene69697:CDS |
| AATCCCAGGAACAGGCAAGG+AGG | 0.672658 | 3.2:+69675179 | MS.gene69697:CDS |
| TTCCCTGTAGGCCACCATGG+AGG | 0.673523 | 3.2:-69675568 | None:intergenic |
| ATGTTGCCGAGCTTGAGAGG+AGG | 0.673867 | 3.2:+69675074 | MS.gene69697:CDS |
| ATTCCGGGGAAGAATGATGG+AGG | 0.679869 | 3.2:+69675415 | MS.gene69697:CDS |
| AAGCTGACAATGCAATTCCG+GGG | 0.692590 | 3.2:+69675401 | MS.gene69697:CDS |
| CTGAATCATAGACAGTCATG+AGG | 0.695799 | 3.2:-69676404 | None:intergenic |
| CAGCATGAGAATTACTTCAG+GGG | 0.700026 | 3.2:+69676516 | MS.gene69697:CDS |
| CTCAGGTTCAGTTAGCCGGG+CGG | 0.704152 | 3.2:-69675014 | None:intergenic |
| TGGCAGCCACTTAACCGCAG+CGG | 0.706818 | 3.2:+69676455 | MS.gene69697:CDS |
| ACCGAAGGAAGGATCCGATG+CGG | 0.718950 | 3.2:+69675144 | MS.gene69697:CDS |
| GTACATGCTGAAAATGATGG+AGG | 0.724912 | 3.2:+69675237 | MS.gene69697:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ATGCCTTCAAGATAAAATGA+CGG | + | chr3.2:69675756-69675775 | MS.gene69697:CDS | 30.0% | |
| GTCTATGATTCAGATATTCA+AGG | + | chr3.2:69676414-69676433 | MS.gene69697:CDS | 30.0% | |
| TTCTTCATCAATCCAACATT+GGG | + | chr3.2:69675968-69675987 | MS.gene69697:CDS | 30.0% | |
| ! | TGTTGGCAAGTGAAAATTTT+AGG | - | chr3.2:69676120-69676139 | None:intergenic | 30.0% |
| !!! | CATTTTATCTTGAAGGCATT+TGG | - | chr3.2:69675755-69675774 | None:intergenic | 30.0% |
| AAGGAGGAAAAAGATGTCAA+GGG | + | chr3.2:69675195-69675214 | MS.gene69697:CDS | 35.0% | |
| AATGACTGAGGATATATGAC+TGG | - | chr3.2:69676282-69676301 | None:intergenic | 35.0% | |
| ACCTCATTAGCATGAAAACT+TGG | - | chr3.2:69676255-69676274 | None:intergenic | 35.0% | |
| AGATCATGAGGTTTCTTGTA+AGG | - | chr3.2:69675643-69675662 | None:intergenic | 35.0% | |
| CTCTGGTGAATTTAACATGA+TGG | + | chr3.2:69676092-69676111 | MS.gene69697:CDS | 35.0% | |
| CTTCTTCATCAATCCAACAT+TGG | + | chr3.2:69675967-69675986 | MS.gene69697:CDS | 35.0% | |
| GAAGTACATGCTGAAAATGA+TGG | + | chr3.2:69675234-69675253 | MS.gene69697:CDS | 35.0% | |
| GATTGATGAAGAAGATTCTC+AGG | - | chr3.2:69675961-69675980 | None:intergenic | 35.0% | |
| TATAAGGACATGTTGAGTGT+TGG | - | chr3.2:69676137-69676156 | None:intergenic | 35.0% | |
| TCAAGATAAAATGACGGCTA+AGG | + | chr3.2:69675762-69675781 | MS.gene69697:CDS | 35.0% | |
| ! | ATCTTTCGGTAAACCGATTT+GGG | - | chr3.2:69675608-69675627 | None:intergenic | 35.0% |
| ! | CAATTGAGTTGTCCATATAG+AGG | + | chr3.2:69676204-69676223 | MS.gene69697:CDS | 35.0% |
| ! | GGCAACATGAATTTAACTTC+TGG | + | chr3.2:69676435-69676454 | MS.gene69697:CDS | 35.0% |
| ! | TCCAAGTTTTCATGCTAATG+AGG | + | chr3.2:69676251-69676270 | MS.gene69697:CDS | 35.0% |
| ! | TCTTCTTCATCTGATTTTGG+TGG | + | chr3.2:69676228-69676247 | MS.gene69697:CDS | 35.0% |
| ! | TTTCTGAAGATGGTGAGAAA+AGG | + | chr3.2:69676373-69676392 | MS.gene69697:CDS | 35.0% |
| !! | TAGCCGTCATTTTATCTTGA+AGG | - | chr3.2:69675762-69675781 | None:intergenic | 35.0% |
| AATGAGTATGATGTCGATGG+GGG | + | chr3.2:69675898-69675917 | MS.gene69697:CDS | 40.0% | |
| ACAAATGGGGGGATATAATC+AGG | - | chr3.2:69675847-69675866 | None:intergenic | 40.0% | |
| AGCAGCATGAGAATTACTTC+AGG | + | chr3.2:69676514-69676533 | MS.gene69697:CDS | 40.0% | |
| AGTCCAGTTATATCGATGGA+AGG | - | chr3.2:69676348-69676367 | None:intergenic | 40.0% | |
| ATTCGTTCAACCGAAACCAA+TGG | + | chr3.2:69676299-69676318 | MS.gene69697:CDS | 40.0% | |
| ATTGCGAAAGTCTGCTGAAA+TGG | - | chr3.2:69676024-69676043 | None:intergenic | 40.0% | |
| CAAGGAGGAAAAAGATGTCA+AGG | + | chr3.2:69675194-69675213 | MS.gene69697:CDS | 40.0% | |
| CAATGAGTATGATGTCGATG+GGG | + | chr3.2:69675897-69675916 | MS.gene69697:CDS | 40.0% | |
| CAGCATGAGAATTACTTCAG+GGG | + | chr3.2:69676516-69676535 | MS.gene69697:CDS | 40.0% | |
| CCAAAATTCGCAAGCTTGTA+AGG | + | chr3.2:69675725-69675744 | MS.gene69697:CDS | 40.0% | |
| CGTTCCTCCACATCAAAATT+CGG | - | chr3.2:69675934-69675953 | None:intergenic | 40.0% | |
| CTGAATCATAGACAGTCATG+AGG | - | chr3.2:69676407-69676426 | None:intergenic | 40.0% | |
| GAAACCTCATGATCTGAAGA+AGG | + | chr3.2:69675648-69675667 | MS.gene69697:CDS | 40.0% | |
| GAAGATGGTGAGAAAAGGAT+TGG | + | chr3.2:69676378-69676397 | MS.gene69697:CDS | 40.0% | |
| GAAGGTGGAACCATATTAAC+CGG | - | chr3.2:69676330-69676349 | None:intergenic | 40.0% | |
| GATCTTTCGGTAAACCGATT+TGG | - | chr3.2:69675609-69675628 | None:intergenic | 40.0% | |
| GATGAAGAAGAGCCTCTATA+TGG | - | chr3.2:69676219-69676238 | None:intergenic | 40.0% | |
| GCAATGAGTATGATGTCGAT+GGG | + | chr3.2:69675896-69675915 | MS.gene69697:CDS | 40.0% | |
| GCAGCATGAGAATTACTTCA+GGG | + | chr3.2:69676515-69676534 | MS.gene69697:CDS | 40.0% | |
| GTACATGCTGAAAATGATGG+AGG | + | chr3.2:69675237-69675256 | MS.gene69697:CDS | 40.0% | |
| TCAATCCAACATTGGGATGA+TGG | + | chr3.2:69675975-69675994 | MS.gene69697:CDS | 40.0% | |
| TCATGAGGTTTCTTGTAAGG+CGG | - | chr3.2:69675640-69675659 | None:intergenic | 40.0% | |
| TCCAAGTCCAGTTATATCGA+TGG | - | chr3.2:69676352-69676371 | None:intergenic | 40.0% | |
| TCCATCGATATAACTGGACT+TGG | + | chr3.2:69676348-69676367 | MS.gene69697:CDS | 40.0% | |
| ! | AAGGCTCAAGGGTTTGTTTA+CGG | + | chr3.2:69675265-69675284 | MS.gene69697:CDS | 40.0% |
| ! | AATGGTGGAAGGATAAGGTT+AGG | + | chr3.2:69675341-69675360 | MS.gene69697:CDS | 40.0% |
| ! | ATCGGTTTACCGAAAGATCA+AGG | + | chr3.2:69675610-69675629 | MS.gene69697:CDS | 40.0% |
| ! | CCTTACAAGCTTGCGAATTT+TGG | - | chr3.2:69675728-69675747 | None:intergenic | 40.0% |
| ! | GAAAATGATGGAGGTTTGCA+AGG | + | chr3.2:69675246-69675265 | MS.gene69697:CDS | 40.0% |
| ! | GGCTCTTCTTCATCTGATTT+TGG | + | chr3.2:69676225-69676244 | MS.gene69697:CDS | 40.0% |
| !! | CGAATTTTGATGTGGAGGAA+CGG | + | chr3.2:69675932-69675951 | MS.gene69697:CDS | 40.0% |
| !! | CTTGCGAATTTTGGCAATGT+CGG | - | chr3.2:69675719-69675738 | None:intergenic | 40.0% |
| !! | TCTTTCGGTAAACCGATTTG+GGG | - | chr3.2:69675607-69675626 | None:intergenic | 40.0% |
| !! | TTGCGAATTTTGGCAATGTC+GGG | - | chr3.2:69675718-69675737 | None:intergenic | 40.0% |
| AAAGGAGCAAGTCAAACCGA+AGG | + | chr3.2:69675129-69675148 | MS.gene69697:CDS | 45.0% | |
| AAGATGTCAAGGGCTCAAGA+TGG | + | chr3.2:69675205-69675224 | MS.gene69697:CDS | 45.0% | |
| AAGCTGACAATGCAATTCCG+GGG | + | chr3.2:69675401-69675420 | MS.gene69697:CDS | 45.0% | |
| AAGGTTAGGTTTGACCGCAA+CGG | + | chr3.2:69675355-69675374 | MS.gene69697:CDS | 45.0% | |
| AATGGCTCAGCCGGTTAATA+TGG | + | chr3.2:69676317-69676336 | MS.gene69697:CDS | 45.0% | |
| ACTTGGATTTCGTGAGGAAG+CGG | + | chr3.2:69676064-69676083 | MS.gene69697:CDS | 45.0% | |
| ATATTAACCGGCTGAGCCAT+TGG | - | chr3.2:69676318-69676337 | None:intergenic | 45.0% | |
| CAAGCTGACAATGCAATTCC+GGG | + | chr3.2:69675400-69675419 | MS.gene69697:CDS | 45.0% | |
| CATGCCTTCTTCAGATCATG+AGG | - | chr3.2:69675655-69675674 | None:intergenic | 45.0% | |
| CCAAGCTGACAATGCAATTC+CGG | + | chr3.2:69675399-69675418 | MS.gene69697:CDS | 45.0% | |
| CCACCTTCCATCGATATAAC+TGG | + | chr3.2:69676342-69676361 | MS.gene69697:CDS | 45.0% | |
| CCAGTTATATCGATGGAAGG+TGG | - | chr3.2:69676345-69676364 | None:intergenic | 45.0% | |
| CCTTATAGCCAAGCTCACAT+CGG | + | chr3.2:69676150-69676169 | MS.gene69697:CDS | 45.0% | |
| CTCATGATCTGAAGAAGGCA+TGG | + | chr3.2:69675653-69675672 | MS.gene69697:CDS | 45.0% | |
| CTTCCTCACGAAATCCAAGT+TGG | - | chr3.2:69676064-69676083 | None:intergenic | 45.0% | |
| GACTTTCGCAATGAAGGAAG+AGG | + | chr3.2:69676032-69676051 | MS.gene69697:CDS | 45.0% | |
| GAGAATTACTTCAGGGGTCA+AGG | + | chr3.2:69676522-69676541 | MS.gene69697:CDS | 45.0% | |
| GATGGTGAGAAAAGGATTGG+TGG | + | chr3.2:69676381-69676400 | MS.gene69697:CDS | 45.0% | |
| GCTTGCAATCGTCAATCAAG+AGG | + | chr3.2:69675798-69675817 | MS.gene69697:CDS | 45.0% | |
| GGCAATGAGTATGATGTCGA+TGG | + | chr3.2:69675895-69675914 | MS.gene69697:CDS | 45.0% | |
| GGTAATATCCCCCTCAACTT+GGG | - | chr3.2:69674996-69675015 | None:intergenic | 45.0% | |
| GGTGCTTCTCAAGCGATTAA+AGG | + | chr3.2:69675111-69675130 | MS.gene69697:CDS | 45.0% | |
| GTAATATCCCCCTCAACTTG+GGG | - | chr3.2:69674995-69675014 | None:intergenic | 45.0% | |
| GTCAGCTTGGTACTTGGATA+TGG | - | chr3.2:69675389-69675408 | None:intergenic | 45.0% | |
| TCAGCAGACTTTCGCAATGA+AGG | + | chr3.2:69676026-69676045 | MS.gene69697:CDS | 45.0% | |
| TCTCTCCATCATCCCAATGT+TGG | - | chr3.2:69675983-69676002 | None:intergenic | 45.0% | |
| TGACCAACTTGGATTTCGTG+AGG | + | chr3.2:69676058-69676077 | MS.gene69697:CDS | 45.0% | |
| TGCAATCGTCAATCAAGAGG+AGG | + | chr3.2:69675801-69675820 | MS.gene69697:CDS | 45.0% | |
| TGCAGATAAGAGAGAACCCA+AGG | - | chr3.2:69675491-69675510 | None:intergenic | 45.0% | |
| TGCATTGTCAGCTTGGTACT+TGG | - | chr3.2:69675395-69675414 | None:intergenic | 45.0% | |
| TTACTTCAGGGGTCAAGGAA+TGG | + | chr3.2:69676527-69676546 | MS.gene69697:CDS | 45.0% | |
| TTCGGTTGAACGAATGACTG+AGG | - | chr3.2:69676294-69676313 | None:intergenic | 45.0% | |
| TTGATTGACGATTGCAAGCC+AGG | - | chr3.2:69675797-69675816 | None:intergenic | 45.0% | |
| TTGCCTTCATTGATGCCGAA+AGG | - | chr3.2:69675880-69675899 | None:intergenic | 45.0% | |
| ! | AATGATGGAGGCAATCCGAT+CGG | + | chr3.2:69675427-69675446 | MS.gene69697:CDS | 45.0% |
| ! | AGGCTCAAGGGTTTGTTTAC+GGG | + | chr3.2:69675266-69675285 | MS.gene69697:CDS | 45.0% |
| ! | CAAGATGTGATTTTCCGCTG+CGG | - | chr3.2:69676472-69676491 | None:intergenic | 45.0% |
| ! | GGACTTGGAGTTTCTGAAGA+TGG | + | chr3.2:69676363-69676382 | MS.gene69697:CDS | 45.0% |
| ! | TGATCTGAAGAAGGCATGGA+AGG | + | chr3.2:69675657-69675676 | MS.gene69697:CDS | 45.0% |
| ! | TTTTCCAGACAGGGCTTCTA+GGG | + | chr3.2:69676173-69676192 | MS.gene69697:CDS | 45.0% |
| !! | AGAGGAGCCGAATTTTGATG+TGG | + | chr3.2:69675924-69675943 | MS.gene69697:CDS | 45.0% |
| !!! | TCACATCGGTTTTCCAGACA+GGG | + | chr3.2:69676164-69676183 | MS.gene69697:CDS | 45.0% |
| AAAGGTCCAGCTGCGACAAA+TGG | - | chr3.2:69675862-69675881 | None:intergenic | 50.0% | |
| AAGGTCCAGCTGCGACAAAT+GGG | - | chr3.2:69675861-69675880 | None:intergenic | 50.0% | |
| AGAAAGGAAAGCCTGTGACC+GGG | + | chr3.2:69675299-69675318 | MS.gene69697:CDS | 50.0% | |
| AGGCGGTTTCCATTGGAGAA+GGG | + | chr3.2:69675538-69675557 | MS.gene69697:CDS | 50.0% | |
| ATGGAGGTTTGCAAGGCTCA+AGG | + | chr3.2:69675253-69675272 | MS.gene69697:CDS | 50.0% | |
| ATTCCGGGGAAGAATGATGG+AGG | + | chr3.2:69675415-69675434 | MS.gene69697:CDS | 50.0% | |
| CATCGGATAATCTCCGCGAA+TGG | + | chr3.2:69675323-69675342 | MS.gene69697:CDS | 50.0% | |
| CCGATGTGAGCTTGGCTATA+AGG | - | chr3.2:69676153-69676172 | None:intergenic | 50.0% | |
| CCGGAATTGCATTGTCAGCT+TGG | - | chr3.2:69675402-69675421 | None:intergenic | 50.0% | |
| CCTTATCCTTCCACCATTCG+CGG | - | chr3.2:69675339-69675358 | None:intergenic | 50.0% | |
| CGGTAATATCCCCCTCAACT+TGG | - | chr3.2:69674997-69675016 | None:intergenic | 50.0% | |
| CTGGAAAACCGATGTGAGCT+TGG | - | chr3.2:69676161-69676180 | None:intergenic | 50.0% | |
| GAGAAAGGAAAGCCTGTGAC+CGG | + | chr3.2:69675298-69675317 | MS.gene69697:CDS | 50.0% | |
| GAGCAAGTCAAACCGAAGGA+AGG | + | chr3.2:69675133-69675152 | MS.gene69697:CDS | 50.0% | |
| GCAATTCCGGGGAAGAATGA+TGG | + | chr3.2:69675412-69675431 | MS.gene69697:CDS | 50.0% | |
| GGACCTTTCGGCATCAATGA+AGG | + | chr3.2:69675874-69675893 | MS.gene69697:CDS | 50.0% | |
| GGTCACAGGCTTTCCTTTCT+CGG | - | chr3.2:69675299-69675318 | None:intergenic | 50.0% | |
| GTCACAGGCTTTCCTTTCTC+GGG | - | chr3.2:69675298-69675317 | None:intergenic | 50.0% | |
| TACGGGATCATTCCCGAGAA+AGG | + | chr3.2:69675283-69675302 | MS.gene69697:CDS | 50.0% | |
| TGAGGTTTCTTGTAAGGCGG+AGG | - | chr3.2:69675637-69675656 | None:intergenic | 50.0% | |
| TGGAGGTTTGCAAGGCTCAA+GGG | + | chr3.2:69675254-69675273 | MS.gene69697:CDS | 50.0% | |
| TGGTACTTGGATATGGCAGC+AGG | - | chr3.2:69675382-69675401 | None:intergenic | 50.0% | |
| TTGATGTTGCCGAGCTTGAG+AGG | + | chr3.2:69675071-69675090 | MS.gene69697:CDS | 50.0% | |
| TTGCCTCCATCATTCTTCCC+CGG | - | chr3.2:69675421-69675440 | None:intergenic | 50.0% | |
| TTTCCTCCTTGCCTGTTCCT+GGG | - | chr3.2:69675185-69675204 | None:intergenic | 50.0% | |
| TTTGTCGCAGCTGGACCTTT+CGG | + | chr3.2:69675862-69675881 | MS.gene69697:CDS | 50.0% | |
| ! | CTGAAGAAGGCATGGAAGGT+TGG | + | chr3.2:69675661-69675680 | MS.gene69697:CDS | 50.0% |
| ! | GATTTTCCGCTGCGGTTAAG+TGG | - | chr3.2:69676464-69676483 | None:intergenic | 50.0% |
| ! | GTTTTCCAGACAGGGCTTCT+AGG | + | chr3.2:69676172-69676191 | MS.gene69697:CDS | 50.0% |
| ! | TAATCTCCGCGAATGGTGGA+AGG | + | chr3.2:69675330-69675349 | MS.gene69697:CDS | 50.0% |
| ! | TGCTGAATGCTGCTAGCTTG+CGG | - | chr3.2:69676495-69676514 | None:intergenic | 50.0% |
| ! | TTTTCCTCCTTGCCTGTTCC+TGG | - | chr3.2:69675186-69675205 | None:intergenic | 50.0% |
| !! | GGAGCCGAATTTTGATGTGG+AGG | + | chr3.2:69675927-69675946 | MS.gene69697:CDS | 50.0% |
| !! | GGTCAAGGAATGGTGATGGA+AGG | + | chr3.2:69676537-69676556 | MS.gene69697:CDS | 50.0% |
| !!! | CTCACATCGGTTTTCCAGAC+AGG | + | chr3.2:69676163-69676182 | MS.gene69697:CDS | 50.0% |
| AACACTGTGATCCCCCTCAG+AGG | + | chr3.2:69675518-69675537 | MS.gene69697:CDS | 55.0% | |
| AATCCCAGGAACAGGCAAGG+AGG | + | chr3.2:69675179-69675198 | MS.gene69697:CDS | 55.0% | |
| ACCGAAACCAATGGCTCAGC+CGG | + | chr3.2:69676308-69676327 | MS.gene69697:CDS | 55.0% | |
| ACCGAAGGAAGGATCCGATG+CGG | + | chr3.2:69675144-69675163 | MS.gene69697:CDS | 55.0% | |
| AGAGCTGCAGGACACAACCT+TGG | + | chr3.2:69675471-69675490 | MS.gene69697:CDS | 55.0% | |
| AGCTTGAGAGGAGGATGTGG+AGG | + | chr3.2:69675083-69675102 | MS.gene69697:CDS | 55.0% | |
| AGGATAAAGCTCCCGCGCTA+AGG | - | chr3.2:69675827-69675846 | None:intergenic | 55.0% | |
| AGGTCCAGCTGCGACAAATG+GGG | - | chr3.2:69675860-69675879 | None:intergenic | 55.0% | |
| ATATGGCAGCAGGACCGTTG+CGG | - | chr3.2:69675372-69675391 | None:intergenic | 55.0% | |
| ATCAAGAGGAGGCCTTAGCG+CGG | + | chr3.2:69675812-69675831 | MS.gene69697:CDS | 55.0% | |
| ATCCCCCTCAACTTGGGGTT+GGG | - | chr3.2:69674990-69675009 | None:intergenic | 55.0% | |
| ATGTTGCCGAGCTTGAGAGG+AGG | + | chr3.2:69675074-69675093 | MS.gene69697:CDS | 55.0% | |
| CAATGGAAACCGCCTCTGAG+GGG | - | chr3.2:69675533-69675552 | None:intergenic | 55.0% | |
| CACCACTCTTCCTTCCCTGT+AGG | - | chr3.2:69675583-69675602 | None:intergenic | 55.0% | |
| CAGCTCTTGCAAGGTGTGAG+GGG | - | chr3.2:69675458-69675477 | None:intergenic | 55.0% | |
| CAGGGGTCAAGGAATGGTGA+TGG | + | chr3.2:69676533-69676552 | MS.gene69697:CDS | 55.0% | |
| CCAATGGAAACCGCCTCTGA+GGG | - | chr3.2:69675534-69675553 | None:intergenic | 55.0% | |
| CCACATCCTCCTCTCAAGCT+CGG | - | chr3.2:69675083-69675102 | None:intergenic | 55.0% | |
| CGGATAATCTCCGCGAATGG+TGG | + | chr3.2:69675326-69675345 | MS.gene69697:CDS | 55.0% | |
| CTACAGGGAAGGAAGAGTGG+TGG | + | chr3.2:69675581-69675600 | MS.gene69697:CDS | 55.0% | |
| GAAAGGAAAGCCTGTGACCG+GGG | + | chr3.2:69675300-69675319 | MS.gene69697:CDS | 55.0% | |
| GAAGAGTGGTGGCCCCAAAT+CGG | + | chr3.2:69675592-69675611 | MS.gene69697:CDS | 55.0% | |
| GAGCTGCAGGACACAACCTT+GGG | + | chr3.2:69675472-69675491 | MS.gene69697:CDS | 55.0% | |
| GAGGAGGATGTGGAGGGATA+AGG | + | chr3.2:69675090-69675109 | MS.gene69697:CDS | 55.0% | |
| GAGGCGGTTTCCATTGGAGA+AGG | + | chr3.2:69675537-69675556 | MS.gene69697:CDS | 55.0% | |
| GCAGCTCTTGCAAGGTGTGA+GGG | - | chr3.2:69675459-69675478 | None:intergenic | 55.0% | |
| GCTAACTGAACCTGAGGCGA+TGG | + | chr3.2:69675021-69675040 | MS.gene69697:CDS | 55.0% | |
| GCTTGAGAGGAGGATGTGGA+GGG | + | chr3.2:69675084-69675103 | MS.gene69697:CDS | 55.0% | |
| GGAAGAGGCTGTGACCAACT+TGG | + | chr3.2:69676047-69676066 | MS.gene69697:CDS | 55.0% | |
| GGAGGAACACCCTTCTCCAA+TGG | - | chr3.2:69675550-69675569 | None:intergenic | 55.0% | |
| GGCGGAGGACCTTGATCTTT+CGG | - | chr3.2:69675622-69675641 | None:intergenic | 55.0% | |
| GTATCCCTAGAAGCCCTGTC+TGG | - | chr3.2:69676180-69676199 | None:intergenic | 55.0% | |
| GTGAGGAAGCGGAAGATCTC+TGG | + | chr3.2:69676075-69676094 | MS.gene69697:CDS | 55.0% | |
| TATCCCCCTCAACTTGGGGT+TGG | - | chr3.2:69674991-69675010 | None:intergenic | 55.0% | |
| TCACACCTTGCAAGAGCTGC+AGG | + | chr3.2:69675459-69675478 | MS.gene69697:CDS | 55.0% | |
| TCCAATGGAAACCGCCTCTG+AGG | - | chr3.2:69675535-69675554 | None:intergenic | 55.0% | |
| TCGCCTCAGGTTCAGTTAGC+CGG | - | chr3.2:69675021-69675040 | None:intergenic | 55.0% | |
| TCTTCGTCAACCATCGCCTC+AGG | - | chr3.2:69675034-69675053 | None:intergenic | 55.0% | |
| TCTTGCAAGGTGTGAGGGGT+TGG | - | chr3.2:69675454-69675473 | None:intergenic | 55.0% | |
| TGATGTCGATGGGGGAGAAG+AGG | + | chr3.2:69675906-69675925 | MS.gene69697:CDS | 55.0% | |
| TGCAGCTCTTGCAAGGTGTG+AGG | - | chr3.2:69675460-69675479 | None:intergenic | 55.0% | |
| TGTGTCCTGCAGCTCTTGCA+AGG | - | chr3.2:69675467-69675486 | None:intergenic | 55.0% | |
| TTCCTGGGATTGCCTCTGCT+TGG | - | chr3.2:69675170-69675189 | None:intergenic | 55.0% | |
| TTGAGGGGGATATTACCGCC+CGG | + | chr3.2:69674999-69675018 | MS.gene69697:CDS | 55.0% | |
| ! | AATGGAAACCGCCTCTGAGG+GGG | - | chr3.2:69675532-69675551 | None:intergenic | 55.0% |
| ! | CCGCGAATGGTGGAAGGATA+AGG | + | chr3.2:69675336-69675355 | MS.gene69697:CDS | 55.0% |
| ! | CGGCTAAGGAAAGTGCAACC+TGG | + | chr3.2:69675776-69675795 | MS.gene69697:CDS | 55.0% |
| !! | ACCGGCTGAGCCATTGGTTT+CGG | - | chr3.2:69676312-69676331 | None:intergenic | 55.0% |
| !! | AGAAGGGTGTTCCTCCTCCA+TGG | + | chr3.2:69675554-69675573 | MS.gene69697:CDS | 55.0% |
| AAAGCCTGTGACCGGGGCAT+CGG | + | chr3.2:69675306-69675325 | MS.gene69697:CDS | 60.0% | |
| ACTGTGATCCCCCTCAGAGG+CGG | + | chr3.2:69675521-69675540 | MS.gene69697:CDS | 60.0% | |
| ATCCCCCCATTTGTCGCAGC+TGG | + | chr3.2:69675853-69675872 | MS.gene69697:CDS | 60.0% | |
| CCCTCAGAGGCGGTTTCCAT+TGG | + | chr3.2:69675531-69675550 | MS.gene69697:CDS | 60.0% | |
| CCGAGCTTGAGAGGAGGATG+TGG | + | chr3.2:69675080-69675099 | MS.gene69697:CDS | 60.0% | |
| CGCCTCAGGTTCAGTTAGCC+GGG | - | chr3.2:69675020-69675039 | None:intergenic | 60.0% | |
| CTCAGGTTCAGTTAGCCGGG+CGG | - | chr3.2:69675017-69675036 | None:intergenic | 60.0% | |
| CTCCTCCATGGTGGCCTACA+GGG | + | chr3.2:69675566-69675585 | MS.gene69697:CDS | 60.0% | |
| GCAGAGGCAATCCCAGGAAC+AGG | + | chr3.2:69675171-69675190 | MS.gene69697:CDS | 60.0% | |
| GCCGCATCGGATCCTTCCTT+CGG | - | chr3.2:69675148-69675167 | None:intergenic | 60.0% | |
| GCGGAGATTATCCGATGCCC+CGG | - | chr3.2:69675320-69675339 | None:intergenic | 60.0% | |
| GGCAATCCCAGGAACAGGCA+AGG | + | chr3.2:69675176-69675195 | MS.gene69697:CDS | 60.0% | |
| GGCCTACAGGGAAGGAAGAG+TGG | + | chr3.2:69675578-69675597 | MS.gene69697:CDS | 60.0% | |
| GGTCCAGCTGCGACAAATGG+GGG | - | chr3.2:69675859-69675878 | None:intergenic | 60.0% | |
| GTCCAGCTGCGACAAATGGG+GGG | - | chr3.2:69675858-69675877 | None:intergenic | 60.0% | |
| GTGTGAGGGGTTGGACCGAT+CGG | - | chr3.2:69675445-69675464 | None:intergenic | 60.0% | |
| TCAAGAGGAGGCCTTAGCGC+GGG | + | chr3.2:69675813-69675832 | MS.gene69697:CDS | 60.0% | |
| TCCATGGTGGCCTACAGGGA+AGG | + | chr3.2:69675570-69675589 | MS.gene69697:CDS | 60.0% | |
| TCCCCCTCAACTTGGGGTTG+GGG | - | chr3.2:69674989-69675008 | None:intergenic | 60.0% | |
| TCCTTCCCTGTAGGCCACCA+TGG | - | chr3.2:69675574-69675593 | None:intergenic | 60.0% | |
| TGCTCCCCAACCCCAAGTTG+AGG | + | chr3.2:69674982-69675001 | MS.gene69697:CDS | 60.0% | |
| TGGCAGCCACTTAACCGCAG+CGG | + | chr3.2:69676455-69676474 | MS.gene69697:CDS | 60.0% | |
| TTATCCGATGCCCCGGTCAC+AGG | - | chr3.2:69675313-69675332 | None:intergenic | 60.0% | |
| TTCCCTGTAGGCCACCATGG+AGG | - | chr3.2:69675571-69675590 | None:intergenic | 60.0% | |
| TTGCCTCTGCTTGGCCGCAT+CGG | - | chr3.2:69675161-69675180 | None:intergenic | 60.0% | |
| ! | AGGGTGTTCCTCCTCCATGG+TGG | + | chr3.2:69675557-69675576 | MS.gene69697:CDS | 60.0% |
| ! | CTCCCCAACCCCAAGTTGAG+GGG | + | chr3.2:69674984-69675003 | MS.gene69697:CDS | 60.0% |
| ! | GCTCCCCAACCCCAAGTTGA+GGG | + | chr3.2:69674983-69675002 | MS.gene69697:CDS | 60.0% |
| ! | TCCCCAACCCCAAGTTGAGG+GGG | + | chr3.2:69674985-69675004 | MS.gene69697:CDS | 60.0% |
| CCTCCTCCATGGTGGCCTAC+AGG | + | chr3.2:69675565-69675584 | MS.gene69697:CDS | 65.0% | |
| CCTGTAGGCCACCATGGAGG+AGG | - | chr3.2:69675568-69675587 | None:intergenic | 65.0% | |
| CGCCCGGCTAACTGAACCTG+AGG | + | chr3.2:69675015-69675034 | MS.gene69697:CDS | 65.0% | |
| GATCCGATGCGGCCAAGCAG+AGG | + | chr3.2:69675155-69675174 | MS.gene69697:CDS | 65.0% | |
| GGCCAAGCAGAGGCAATCCC+AGG | + | chr3.2:69675165-69675184 | MS.gene69697:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 69674950 | 69676583 | 69674950 | ID=MS.gene69697 |
| chr3.2 | mRNA | 69674950 | 69676583 | 69674950 | ID=MS.gene69697.t1;Parent=MS.gene69697 |
| chr3.2 | exon | 69674950 | 69676583 | 69674950 | ID=MS.gene69697.t1.exon1;Parent=MS.gene69697.t1 |
| chr3.2 | CDS | 69674950 | 69676583 | 69674950 | ID=cds.MS.gene69697.t1;Parent=MS.gene69697.t1 |
| Gene Sequence |
| Protein sequence |