Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69697.t1 | XP_013461072.1 | 94.7 | 547 | 16 | 4 | 1 | 544 | 9 | 545 | 1.40E-297 | 1031.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69697.t1 | O24606 | 62.5 | 550 | 178 | 9 | 1 | 544 | 6 | 533 | 2.4e-186 | 653.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69697.t1 | D0EXG5 | 94.7 | 547 | 16 | 4 | 1 | 544 | 9 | 545 | 9.7e-298 | 1031.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene69697.t1 | TF | EIL |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69697.t1 | MTR_3g078770 | 94.698 | 547 | 16 | 4 | 1 | 544 | 9 | 545 | 0.0 | 1060 |
MS.gene69697.t1 | MTR_5g087790 | 72.578 | 547 | 137 | 10 | 1 | 540 | 7 | 547 | 0.0 | 792 |
MS.gene69697.t1 | MTR_2g098470 | 63.399 | 306 | 98 | 4 | 33 | 326 | 27 | 330 | 6.52e-131 | 395 |
MS.gene69697.t1 | MTR_3g087530 | 63.953 | 258 | 82 | 4 | 41 | 293 | 29 | 280 | 2.25e-113 | 343 |
MS.gene69697.t1 | MTR_6g060600 | 38.370 | 503 | 264 | 9 | 18 | 512 | 17 | 481 | 1.11e-111 | 347 |
MS.gene69697.t1 | MTR_6g460640 | 51.667 | 300 | 134 | 4 | 32 | 326 | 31 | 324 | 1.68e-108 | 338 |
MS.gene69697.t1 | MTR_8g091370 | 60.232 | 259 | 97 | 3 | 38 | 293 | 16 | 271 | 8.20e-107 | 327 |
MS.gene69697.t1 | MTR_3g010790 | 52.000 | 250 | 116 | 2 | 98 | 343 | 1 | 250 | 5.49e-90 | 285 |
MS.gene69697.t1 | MTR_1g024420 | 44.660 | 103 | 55 | 1 | 40 | 140 | 6 | 108 | 6.98e-27 | 105 |
MS.gene69697.t1 | MTR_7g095580 | 43.269 | 104 | 47 | 3 | 87 | 181 | 1 | 101 | 8.36e-19 | 82.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69697.t1 | AT3G20770 | 62.956 | 548 | 175 | 10 | 1 | 542 | 6 | 531 | 0.0 | 668 |
MS.gene69697.t1 | AT2G27050 | 60.323 | 557 | 165 | 15 | 1 | 536 | 7 | 528 | 0.0 | 622 |
MS.gene69697.t1 | AT1G73730 | 62.541 | 307 | 93 | 6 | 35 | 326 | 17 | 316 | 1.98e-127 | 384 |
MS.gene69697.t1 | AT1G73730 | 62.541 | 307 | 93 | 6 | 35 | 326 | 29 | 328 | 2.09e-127 | 384 |
MS.gene69697.t1 | AT5G21120 | 47.260 | 438 | 177 | 12 | 9 | 428 | 15 | 416 | 1.42e-119 | 362 |
MS.gene69697.t1 | AT5G21120 | 47.260 | 438 | 177 | 12 | 9 | 428 | 15 | 416 | 1.42e-119 | 362 |
MS.gene69697.t1 | AT5G21120 | 47.260 | 438 | 177 | 12 | 9 | 428 | 22 | 423 | 1.76e-119 | 362 |
MS.gene69697.t1 | AT5G65100 | 44.208 | 423 | 191 | 11 | 39 | 424 | 33 | 447 | 1.43e-106 | 330 |
MS.gene69697.t1 | AT5G10120 | 57.634 | 262 | 108 | 1 | 35 | 293 | 14 | 275 | 1.39e-104 | 322 |
Find 187 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTTACAAGCTTGCGAATTT+TGG | 0.116142 | 3.2:-69675725 | None:intergenic |
GGCTCTTCTTCATCTGATTT+TGG | 0.161207 | 3.2:+69676225 | MS.gene69697:CDS |
ATCTTTCGGTAAACCGATTT+GGG | 0.200055 | 3.2:-69675605 | None:intergenic |
CCAAGCTGACAATGCAATTC+CGG | 0.279173 | 3.2:+69675399 | MS.gene69697:CDS |
GATCTTTCGGTAAACCGATT+TGG | 0.301097 | 3.2:-69675606 | None:intergenic |
CCGATGTGAGCTTGGCTATA+AGG | 0.303939 | 3.2:-69676150 | None:intergenic |
AATGGCTCAGCCGGTTAATA+TGG | 0.309330 | 3.2:+69676317 | MS.gene69697:CDS |
GGTCACAGGCTTTCCTTTCT+CGG | 0.320948 | 3.2:-69675296 | None:intergenic |
ACCGGCTGAGCCATTGGTTT+CGG | 0.323642 | 3.2:-69676309 | None:intergenic |
GGTGCTTCTCAAGCGATTAA+AGG | 0.326570 | 3.2:+69675111 | MS.gene69697:CDS |
GTCAGCTTGGTACTTGGATA+TGG | 0.327342 | 3.2:-69675386 | None:intergenic |
CGTTCCTCCACATCAAAATT+CGG | 0.328270 | 3.2:-69675931 | None:intergenic |
AGGCTCAAGGGTTTGTTTAC+GGG | 0.333360 | 3.2:+69675266 | MS.gene69697:CDS |
CCAAAATTCGCAAGCTTGTA+AGG | 0.334057 | 3.2:+69675725 | MS.gene69697:CDS |
AAGGCTCAAGGGTTTGTTTA+CGG | 0.347915 | 3.2:+69675265 | MS.gene69697:CDS |
GGCGGAGGACCTTGATCTTT+CGG | 0.355023 | 3.2:-69675619 | None:intergenic |
CCTCCTCCATGGTGGCCTAC+AGG | 0.364645 | 3.2:+69675565 | MS.gene69697:CDS |
GATGAAGAAGAGCCTCTATA+TGG | 0.374646 | 3.2:-69676216 | None:intergenic |
AAAGGTCCAGCTGCGACAAA+TGG | 0.377442 | 3.2:-69675859 | None:intergenic |
TTGATTGACGATTGCAAGCC+AGG | 0.380797 | 3.2:-69675794 | None:intergenic |
GTCACAGGCTTTCCTTTCTC+GGG | 0.386577 | 3.2:-69675295 | None:intergenic |
TTCTTCATCAATCCAACATT+GGG | 0.399620 | 3.2:+69675968 | MS.gene69697:CDS |
GAGGAGGATGTGGAGGGATA+AGG | 0.401050 | 3.2:+69675090 | MS.gene69697:CDS |
TGCATTGTCAGCTTGGTACT+TGG | 0.401725 | 3.2:-69675392 | None:intergenic |
CCACCTTCCATCGATATAAC+TGG | 0.402818 | 3.2:+69676342 | MS.gene69697:CDS |
AGATCATGAGGTTTCTTGTA+AGG | 0.405253 | 3.2:-69675640 | None:intergenic |
ATTGCGAAAGTCTGCTGAAA+TGG | 0.405530 | 3.2:-69676021 | None:intergenic |
TTTCCTCCTTGCCTGTTCCT+GGG | 0.410461 | 3.2:-69675182 | None:intergenic |
CAAGCTGACAATGCAATTCC+GGG | 0.413671 | 3.2:+69675400 | MS.gene69697:CDS |
AAGGTCCAGCTGCGACAAAT+GGG | 0.416033 | 3.2:-69675858 | None:intergenic |
TTTGTCGCAGCTGGACCTTT+CGG | 0.419285 | 3.2:+69675862 | MS.gene69697:CDS |
TTGCCTCTGCTTGGCCGCAT+CGG | 0.422356 | 3.2:-69675158 | None:intergenic |
TCGCCTCAGGTTCAGTTAGC+CGG | 0.423673 | 3.2:-69675018 | None:intergenic |
GATTGATGAAGAAGATTCTC+AGG | 0.425025 | 3.2:-69675958 | None:intergenic |
TCAATCCAACATTGGGATGA+TGG | 0.429901 | 3.2:+69675975 | MS.gene69697:CDS |
CCGGAATTGCATTGTCAGCT+TGG | 0.430474 | 3.2:-69675399 | None:intergenic |
GCCGCATCGGATCCTTCCTT+CGG | 0.430698 | 3.2:-69675145 | None:intergenic |
GATCATGAGATGGCTCTATC+TGG | 0.431769 | 3.2:+69674941 | None:intergenic |
GGCAACATGAATTTAACTTC+TGG | 0.433244 | 3.2:+69676435 | MS.gene69697:CDS |
CCCTCAGAGGCGGTTTCCAT+TGG | 0.434105 | 3.2:+69675531 | MS.gene69697:CDS |
ACCTCATTAGCATGAAAACT+TGG | 0.436185 | 3.2:-69676252 | None:intergenic |
TTCCTGGGATTGCCTCTGCT+TGG | 0.439634 | 3.2:-69675167 | None:intergenic |
GCAGCTCTTGCAAGGTGTGA+GGG | 0.439936 | 3.2:-69675456 | None:intergenic |
CCGCGAATGGTGGAAGGATA+AGG | 0.449952 | 3.2:+69675336 | MS.gene69697:CDS |
GCAGAGGCAATCCCAGGAAC+AGG | 0.451574 | 3.2:+69675171 | MS.gene69697:CDS |
CTCCTCCATGGTGGCCTACA+GGG | 0.453443 | 3.2:+69675566 | MS.gene69697:CDS |
CCTTATCCTTCCACCATTCG+CGG | 0.453482 | 3.2:-69675336 | None:intergenic |
GTGAGGAAGCGGAAGATCTC+TGG | 0.455579 | 3.2:+69676075 | MS.gene69697:CDS |
TACGGGATCATTCCCGAGAA+AGG | 0.459725 | 3.2:+69675283 | MS.gene69697:CDS |
GAAGGTGGAACCATATTAAC+CGG | 0.463028 | 3.2:-69676327 | None:intergenic |
CTTCTTCATCAATCCAACAT+TGG | 0.463424 | 3.2:+69675967 | MS.gene69697:CDS |
AGCAGCATGAGAATTACTTC+AGG | 0.465101 | 3.2:+69676514 | MS.gene69697:CDS |
TCAGCAGACTTTCGCAATGA+AGG | 0.468808 | 3.2:+69676026 | MS.gene69697:CDS |
TGCAGCTCTTGCAAGGTGTG+AGG | 0.478278 | 3.2:-69675457 | None:intergenic |
GAGAAAGGAAAGCCTGTGAC+CGG | 0.478282 | 3.2:+69675298 | MS.gene69697:CDS |
ATATTAACCGGCTGAGCCAT+TGG | 0.478420 | 3.2:-69676315 | None:intergenic |
GTATCCCTAGAAGCCCTGTC+TGG | 0.478900 | 3.2:-69676177 | None:intergenic |
GTCTATGATTCAGATATTCA+AGG | 0.479340 | 3.2:+69676414 | MS.gene69697:CDS |
TCACACCTTGCAAGAGCTGC+AGG | 0.479872 | 3.2:+69675459 | MS.gene69697:CDS |
CGCCTCAGGTTCAGTTAGCC+GGG | 0.481589 | 3.2:-69675017 | None:intergenic |
GATGGCTCTATCTGGTGATC+TGG | 0.482695 | 3.2:+69674949 | None:intergenic |
TCTTGCAAGGTGTGAGGGGT+TGG | 0.482958 | 3.2:-69675451 | None:intergenic |
GCTCCCCAACCCCAAGTTGA+GGG | 0.486678 | 3.2:+69674983 | MS.gene69697:CDS |
TGCTCCCCAACCCCAAGTTG+AGG | 0.487998 | 3.2:+69674982 | MS.gene69697:CDS |
TCCTTCCCTGTAGGCCACCA+TGG | 0.488917 | 3.2:-69675571 | None:intergenic |
CTCTGGTGAATTTAACATGA+TGG | 0.489439 | 3.2:+69676092 | MS.gene69697:CDS |
GAGAATTACTTCAGGGGTCA+AGG | 0.490089 | 3.2:+69676522 | MS.gene69697:CDS |
CATGCCTTCTTCAGATCATG+AGG | 0.490321 | 3.2:-69675652 | None:intergenic |
GGCCAAGCAGAGGCAATCCC+AGG | 0.494536 | 3.2:+69675165 | MS.gene69697:CDS |
TTTCTGAAGATGGTGAGAAA+AGG | 0.494881 | 3.2:+69676373 | MS.gene69697:CDS |
CCAATGGAAACCGCCTCTGA+GGG | 0.495394 | 3.2:-69675531 | None:intergenic |
CCGAGCTTGAGAGGAGGATG+TGG | 0.496132 | 3.2:+69675080 | MS.gene69697:CDS |
AATGGTGGAAGGATAAGGTT+AGG | 0.496339 | 3.2:+69675341 | MS.gene69697:CDS |
GCAATTCCGGGGAAGAATGA+TGG | 0.501691 | 3.2:+69675412 | MS.gene69697:CDS |
CGGATAATCTCCGCGAATGG+TGG | 0.504192 | 3.2:+69675326 | MS.gene69697:CDS |
ACCGAAACCAATGGCTCAGC+CGG | 0.505945 | 3.2:+69676308 | MS.gene69697:CDS |
TCTTCGTCAACCATCGCCTC+AGG | 0.506692 | 3.2:-69675031 | None:intergenic |
GGACTTGGAGTTTCTGAAGA+TGG | 0.507451 | 3.2:+69676363 | MS.gene69697:CDS |
CTGAAGAAGGCATGGAAGGT+TGG | 0.507865 | 3.2:+69675661 | MS.gene69697:CDS |
TTATCCGATGCCCCGGTCAC+AGG | 0.510724 | 3.2:-69675310 | None:intergenic |
TCTCTCCATCATCCCAATGT+TGG | 0.511441 | 3.2:-69675980 | None:intergenic |
AGAAGGGTGTTCCTCCTCCA+TGG | 0.516637 | 3.2:+69675554 | MS.gene69697:CDS |
ATGGAGGTTTGCAAGGCTCA+AGG | 0.517295 | 3.2:+69675253 | MS.gene69697:CDS |
GGAAGAGGCTGTGACCAACT+TGG | 0.519473 | 3.2:+69676047 | MS.gene69697:CDS |
AGGATAAAGCTCCCGCGCTA+AGG | 0.520455 | 3.2:-69675824 | None:intergenic |
GAGCTGCAGGACACAACCTT+GGG | 0.520799 | 3.2:+69675472 | MS.gene69697:CDS |
ACTTGGATTTCGTGAGGAAG+CGG | 0.521923 | 3.2:+69676064 | MS.gene69697:CDS |
CAATTGAGTTGTCCATATAG+AGG | 0.522292 | 3.2:+69676204 | MS.gene69697:CDS |
AAAGCCTGTGACCGGGGCAT+CGG | 0.525234 | 3.2:+69675306 | MS.gene69697:CDS |
GGACCTTTCGGCATCAATGA+AGG | 0.525234 | 3.2:+69675874 | MS.gene69697:CDS |
AGAAAGGAAAGCCTGTGACC+GGG | 0.526532 | 3.2:+69675299 | MS.gene69697:CDS |
TGTGTCCTGCAGCTCTTGCA+AGG | 0.529578 | 3.2:-69675464 | None:intergenic |
ATCGGTTTACCGAAAGATCA+AGG | 0.532949 | 3.2:+69675610 | MS.gene69697:CDS |
GAGGCGGTTTCCATTGGAGA+AGG | 0.533081 | 3.2:+69675537 | MS.gene69697:CDS |
CTGGAAAACCGATGTGAGCT+TGG | 0.533885 | 3.2:-69676158 | None:intergenic |
GAAGAGTGGTGGCCCCAAAT+CGG | 0.536945 | 3.2:+69675592 | MS.gene69697:CDS |
CGGCTAAGGAAAGTGCAACC+TGG | 0.537233 | 3.2:+69675776 | MS.gene69697:CDS |
TCAAGATAAAATGACGGCTA+AGG | 0.537615 | 3.2:+69675762 | MS.gene69697:CDS |
TGAGGTTTCTTGTAAGGCGG+AGG | 0.540347 | 3.2:-69675634 | None:intergenic |
GAAGTACATGCTGAAAATGA+TGG | 0.543075 | 3.2:+69675234 | MS.gene69697:CDS |
GTGTGAGGGGTTGGACCGAT+CGG | 0.543206 | 3.2:-69675442 | None:intergenic |
GAAAGGAAAGCCTGTGACCG+GGG | 0.544653 | 3.2:+69675300 | MS.gene69697:CDS |
GACTTTCGCAATGAAGGAAG+AGG | 0.546905 | 3.2:+69676032 | MS.gene69697:CDS |
TTGCCTCCATCATTCTTCCC+CGG | 0.547718 | 3.2:-69675418 | None:intergenic |
CTCATGATCTGAAGAAGGCA+TGG | 0.547916 | 3.2:+69675653 | MS.gene69697:CDS |
TTGATGTTGCCGAGCTTGAG+AGG | 0.548157 | 3.2:+69675071 | MS.gene69697:CDS |
GCAATGAGTATGATGTCGAT+GGG | 0.548446 | 3.2:+69675896 | MS.gene69697:CDS |
GAAACCTCATGATCTGAAGA+AGG | 0.550430 | 3.2:+69675648 | MS.gene69697:CDS |
TGGTACTTGGATATGGCAGC+AGG | 0.551180 | 3.2:-69675379 | None:intergenic |
AGAGCTGCAGGACACAACCT+TGG | 0.551353 | 3.2:+69675471 | MS.gene69697:CDS |
GCAGCATGAGAATTACTTCA+GGG | 0.554925 | 3.2:+69676515 | MS.gene69697:CDS |
TAATCTCCGCGAATGGTGGA+AGG | 0.556888 | 3.2:+69675330 | MS.gene69697:CDS |
CACCACTCTTCCTTCCCTGT+AGG | 0.558000 | 3.2:-69675580 | None:intergenic |
AGCTTGAGAGGAGGATGTGG+AGG | 0.561978 | 3.2:+69675083 | MS.gene69697:CDS |
TGCAGATAAGAGAGAACCCA+AGG | 0.562468 | 3.2:-69675488 | None:intergenic |
TCCAAGTCCAGTTATATCGA+TGG | 0.562663 | 3.2:-69676349 | None:intergenic |
CCTGTAGGCCACCATGGAGG+AGG | 0.564770 | 3.2:-69675565 | None:intergenic |
GGCAATCCCAGGAACAGGCA+AGG | 0.565695 | 3.2:+69675176 | MS.gene69697:CDS |
TCCAATGGAAACCGCCTCTG+AGG | 0.567003 | 3.2:-69675532 | None:intergenic |
CAGCTCTTGCAAGGTGTGAG+GGG | 0.568677 | 3.2:-69675455 | None:intergenic |
TGGAGGTTTGCAAGGCTCAA+GGG | 0.571141 | 3.2:+69675254 | MS.gene69697:CDS |
TGATCTGAAGAAGGCATGGA+AGG | 0.572466 | 3.2:+69675657 | MS.gene69697:CDS |
GGCCTACAGGGAAGGAAGAG+TGG | 0.575468 | 3.2:+69675578 | MS.gene69697:CDS |
TCCATCGATATAACTGGACT+TGG | 0.575840 | 3.2:+69676348 | MS.gene69697:CDS |
GGTCCAGCTGCGACAAATGG+GGG | 0.576693 | 3.2:-69675856 | None:intergenic |
TTACTTCAGGGGTCAAGGAA+TGG | 0.577986 | 3.2:+69676527 | MS.gene69697:CDS |
GATCCGATGCGGCCAAGCAG+AGG | 0.578212 | 3.2:+69675155 | MS.gene69697:CDS |
GGAGGAACACCCTTCTCCAA+TGG | 0.579400 | 3.2:-69675547 | None:intergenic |
AGGTCCAGCTGCGACAAATG+GGG | 0.579864 | 3.2:-69675857 | None:intergenic |
GCTAACTGAACCTGAGGCGA+TGG | 0.580269 | 3.2:+69675021 | MS.gene69697:CDS |
CTCCCCAACCCCAAGTTGAG+GGG | 0.581721 | 3.2:+69674984 | MS.gene69697:CDS |
CTTCCTCACGAAATCCAAGT+TGG | 0.583208 | 3.2:-69676061 | None:intergenic |
TGCTGAATGCTGCTAGCTTG+CGG | 0.585537 | 3.2:-69676492 | None:intergenic |
AATGGAAACCGCCTCTGAGG+GGG | 0.586396 | 3.2:-69675529 | None:intergenic |
TCAAGAGGAGGCCTTAGCGC+GGG | 0.589414 | 3.2:+69675813 | MS.gene69697:CDS |
TCCATGGTGGCCTACAGGGA+AGG | 0.589968 | 3.2:+69675570 | MS.gene69697:CDS |
GAAAATGATGGAGGTTTGCA+AGG | 0.591397 | 3.2:+69675246 | MS.gene69697:CDS |
AAGATGTCAAGGGCTCAAGA+TGG | 0.596334 | 3.2:+69675205 | MS.gene69697:CDS |
GGTCAAGGAATGGTGATGGA+AGG | 0.597963 | 3.2:+69676537 | MS.gene69697:CDS |
CAGGGGTCAAGGAATGGTGA+TGG | 0.599899 | 3.2:+69676533 | MS.gene69697:CDS |
TTGCCTTCATTGATGCCGAA+AGG | 0.600278 | 3.2:-69675877 | None:intergenic |
GAAGATGGTGAGAAAAGGAT+TGG | 0.601828 | 3.2:+69676378 | MS.gene69697:CDS |
GAGCAAGTCAAACCGAAGGA+AGG | 0.602432 | 3.2:+69675133 | MS.gene69697:CDS |
AAGGTTAGGTTTGACCGCAA+CGG | 0.602662 | 3.2:+69675355 | MS.gene69697:CDS |
AATGACTGAGGATATATGAC+TGG | 0.604420 | 3.2:-69676279 | None:intergenic |
CCAGTTATATCGATGGAAGG+TGG | 0.610149 | 3.2:-69676342 | None:intergenic |
TCCCCAACCCCAAGTTGAGG+GGG | 0.613156 | 3.2:+69674985 | MS.gene69697:CDS |
CGCCCGGCTAACTGAACCTG+AGG | 0.614118 | 3.2:+69675015 | MS.gene69697:CDS |
CCACATCCTCCTCTCAAGCT+CGG | 0.615219 | 3.2:-69675080 | None:intergenic |
GGCAATGAGTATGATGTCGA+TGG | 0.618237 | 3.2:+69675895 | MS.gene69697:CDS |
AGGCGGTTTCCATTGGAGAA+GGG | 0.619284 | 3.2:+69675538 | MS.gene69697:CDS |
CATCGGATAATCTCCGCGAA+TGG | 0.620613 | 3.2:+69675323 | MS.gene69697:CDS |
TCTTTCGGTAAACCGATTTG+GGG | 0.621358 | 3.2:-69675604 | None:intergenic |
GCGGAGATTATCCGATGCCC+CGG | 0.628966 | 3.2:-69675317 | None:intergenic |
TCATGAGGTTTCTTGTAAGG+CGG | 0.630329 | 3.2:-69675637 | None:intergenic |
AATGATGGAGGCAATCCGAT+CGG | 0.634526 | 3.2:+69675427 | MS.gene69697:CDS |
GCTTGCAATCGTCAATCAAG+AGG | 0.634856 | 3.2:+69675798 | MS.gene69697:CDS |
ATCAAGAGGAGGCCTTAGCG+CGG | 0.637665 | 3.2:+69675812 | MS.gene69697:CDS |
GCTTGAGAGGAGGATGTGGA+GGG | 0.637705 | 3.2:+69675084 | MS.gene69697:CDS |
TGACCAACTTGGATTTCGTG+AGG | 0.639847 | 3.2:+69676058 | MS.gene69697:CDS |
TGCAATCGTCAATCAAGAGG+AGG | 0.640235 | 3.2:+69675801 | MS.gene69697:CDS |
CCTTATAGCCAAGCTCACAT+CGG | 0.641231 | 3.2:+69676150 | MS.gene69697:CDS |
ATTCGTTCAACCGAAACCAA+TGG | 0.641894 | 3.2:+69676299 | MS.gene69697:CDS |
AGTCCAGTTATATCGATGGA+AGG | 0.642356 | 3.2:-69676345 | None:intergenic |
ATGCCTTCAAGATAAAATGA+CGG | 0.643938 | 3.2:+69675756 | MS.gene69697:CDS |
AAAGGAGCAAGTCAAACCGA+AGG | 0.648111 | 3.2:+69675129 | MS.gene69697:CDS |
GATGGTGAGAAAAGGATTGG+TGG | 0.649012 | 3.2:+69676381 | MS.gene69697:CDS |
ATATGGCAGCAGGACCGTTG+CGG | 0.650469 | 3.2:-69675369 | None:intergenic |
TATAAGGACATGTTGAGTGT+TGG | 0.651109 | 3.2:-69676134 | None:intergenic |
AGGGTGTTCCTCCTCCATGG+TGG | 0.653236 | 3.2:+69675557 | MS.gene69697:CDS |
TTCGGTTGAACGAATGACTG+AGG | 0.658942 | 3.2:-69676291 | None:intergenic |
CAATGGAAACCGCCTCTGAG+GGG | 0.659298 | 3.2:-69675530 | None:intergenic |
GTCCAGCTGCGACAAATGGG+GGG | 0.662952 | 3.2:-69675855 | None:intergenic |
CTACAGGGAAGGAAGAGTGG+TGG | 0.665816 | 3.2:+69675581 | MS.gene69697:CDS |
CAATGAGTATGATGTCGATG+GGG | 0.670997 | 3.2:+69675897 | MS.gene69697:CDS |
AATGAGTATGATGTCGATGG+GGG | 0.671000 | 3.2:+69675898 | MS.gene69697:CDS |
AATCCCAGGAACAGGCAAGG+AGG | 0.672658 | 3.2:+69675179 | MS.gene69697:CDS |
TTCCCTGTAGGCCACCATGG+AGG | 0.673523 | 3.2:-69675568 | None:intergenic |
ATGTTGCCGAGCTTGAGAGG+AGG | 0.673867 | 3.2:+69675074 | MS.gene69697:CDS |
ATTCCGGGGAAGAATGATGG+AGG | 0.679869 | 3.2:+69675415 | MS.gene69697:CDS |
AAGCTGACAATGCAATTCCG+GGG | 0.692590 | 3.2:+69675401 | MS.gene69697:CDS |
CTGAATCATAGACAGTCATG+AGG | 0.695799 | 3.2:-69676404 | None:intergenic |
CAGCATGAGAATTACTTCAG+GGG | 0.700026 | 3.2:+69676516 | MS.gene69697:CDS |
CTCAGGTTCAGTTAGCCGGG+CGG | 0.704152 | 3.2:-69675014 | None:intergenic |
TGGCAGCCACTTAACCGCAG+CGG | 0.706818 | 3.2:+69676455 | MS.gene69697:CDS |
ACCGAAGGAAGGATCCGATG+CGG | 0.718950 | 3.2:+69675144 | MS.gene69697:CDS |
GTACATGCTGAAAATGATGG+AGG | 0.724912 | 3.2:+69675237 | MS.gene69697:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
ATGCCTTCAAGATAAAATGA+CGG | + | chr3.2:69675756-69675775 | MS.gene69697:CDS | 30.0% | |
GTCTATGATTCAGATATTCA+AGG | + | chr3.2:69676414-69676433 | MS.gene69697:CDS | 30.0% | |
TTCTTCATCAATCCAACATT+GGG | + | chr3.2:69675968-69675987 | MS.gene69697:CDS | 30.0% | |
! | TGTTGGCAAGTGAAAATTTT+AGG | - | chr3.2:69676120-69676139 | None:intergenic | 30.0% |
!!! | CATTTTATCTTGAAGGCATT+TGG | - | chr3.2:69675755-69675774 | None:intergenic | 30.0% |
AAGGAGGAAAAAGATGTCAA+GGG | + | chr3.2:69675195-69675214 | MS.gene69697:CDS | 35.0% | |
AATGACTGAGGATATATGAC+TGG | - | chr3.2:69676282-69676301 | None:intergenic | 35.0% | |
ACCTCATTAGCATGAAAACT+TGG | - | chr3.2:69676255-69676274 | None:intergenic | 35.0% | |
AGATCATGAGGTTTCTTGTA+AGG | - | chr3.2:69675643-69675662 | None:intergenic | 35.0% | |
CTCTGGTGAATTTAACATGA+TGG | + | chr3.2:69676092-69676111 | MS.gene69697:CDS | 35.0% | |
CTTCTTCATCAATCCAACAT+TGG | + | chr3.2:69675967-69675986 | MS.gene69697:CDS | 35.0% | |
GAAGTACATGCTGAAAATGA+TGG | + | chr3.2:69675234-69675253 | MS.gene69697:CDS | 35.0% | |
GATTGATGAAGAAGATTCTC+AGG | - | chr3.2:69675961-69675980 | None:intergenic | 35.0% | |
TATAAGGACATGTTGAGTGT+TGG | - | chr3.2:69676137-69676156 | None:intergenic | 35.0% | |
TCAAGATAAAATGACGGCTA+AGG | + | chr3.2:69675762-69675781 | MS.gene69697:CDS | 35.0% | |
! | ATCTTTCGGTAAACCGATTT+GGG | - | chr3.2:69675608-69675627 | None:intergenic | 35.0% |
! | CAATTGAGTTGTCCATATAG+AGG | + | chr3.2:69676204-69676223 | MS.gene69697:CDS | 35.0% |
! | GGCAACATGAATTTAACTTC+TGG | + | chr3.2:69676435-69676454 | MS.gene69697:CDS | 35.0% |
! | TCCAAGTTTTCATGCTAATG+AGG | + | chr3.2:69676251-69676270 | MS.gene69697:CDS | 35.0% |
! | TCTTCTTCATCTGATTTTGG+TGG | + | chr3.2:69676228-69676247 | MS.gene69697:CDS | 35.0% |
! | TTTCTGAAGATGGTGAGAAA+AGG | + | chr3.2:69676373-69676392 | MS.gene69697:CDS | 35.0% |
!! | TAGCCGTCATTTTATCTTGA+AGG | - | chr3.2:69675762-69675781 | None:intergenic | 35.0% |
AATGAGTATGATGTCGATGG+GGG | + | chr3.2:69675898-69675917 | MS.gene69697:CDS | 40.0% | |
ACAAATGGGGGGATATAATC+AGG | - | chr3.2:69675847-69675866 | None:intergenic | 40.0% | |
AGCAGCATGAGAATTACTTC+AGG | + | chr3.2:69676514-69676533 | MS.gene69697:CDS | 40.0% | |
AGTCCAGTTATATCGATGGA+AGG | - | chr3.2:69676348-69676367 | None:intergenic | 40.0% | |
ATTCGTTCAACCGAAACCAA+TGG | + | chr3.2:69676299-69676318 | MS.gene69697:CDS | 40.0% | |
ATTGCGAAAGTCTGCTGAAA+TGG | - | chr3.2:69676024-69676043 | None:intergenic | 40.0% | |
CAAGGAGGAAAAAGATGTCA+AGG | + | chr3.2:69675194-69675213 | MS.gene69697:CDS | 40.0% | |
CAATGAGTATGATGTCGATG+GGG | + | chr3.2:69675897-69675916 | MS.gene69697:CDS | 40.0% | |
CAGCATGAGAATTACTTCAG+GGG | + | chr3.2:69676516-69676535 | MS.gene69697:CDS | 40.0% | |
CCAAAATTCGCAAGCTTGTA+AGG | + | chr3.2:69675725-69675744 | MS.gene69697:CDS | 40.0% | |
CGTTCCTCCACATCAAAATT+CGG | - | chr3.2:69675934-69675953 | None:intergenic | 40.0% | |
CTGAATCATAGACAGTCATG+AGG | - | chr3.2:69676407-69676426 | None:intergenic | 40.0% | |
GAAACCTCATGATCTGAAGA+AGG | + | chr3.2:69675648-69675667 | MS.gene69697:CDS | 40.0% | |
GAAGATGGTGAGAAAAGGAT+TGG | + | chr3.2:69676378-69676397 | MS.gene69697:CDS | 40.0% | |
GAAGGTGGAACCATATTAAC+CGG | - | chr3.2:69676330-69676349 | None:intergenic | 40.0% | |
GATCTTTCGGTAAACCGATT+TGG | - | chr3.2:69675609-69675628 | None:intergenic | 40.0% | |
GATGAAGAAGAGCCTCTATA+TGG | - | chr3.2:69676219-69676238 | None:intergenic | 40.0% | |
GCAATGAGTATGATGTCGAT+GGG | + | chr3.2:69675896-69675915 | MS.gene69697:CDS | 40.0% | |
GCAGCATGAGAATTACTTCA+GGG | + | chr3.2:69676515-69676534 | MS.gene69697:CDS | 40.0% | |
GTACATGCTGAAAATGATGG+AGG | + | chr3.2:69675237-69675256 | MS.gene69697:CDS | 40.0% | |
TCAATCCAACATTGGGATGA+TGG | + | chr3.2:69675975-69675994 | MS.gene69697:CDS | 40.0% | |
TCATGAGGTTTCTTGTAAGG+CGG | - | chr3.2:69675640-69675659 | None:intergenic | 40.0% | |
TCCAAGTCCAGTTATATCGA+TGG | - | chr3.2:69676352-69676371 | None:intergenic | 40.0% | |
TCCATCGATATAACTGGACT+TGG | + | chr3.2:69676348-69676367 | MS.gene69697:CDS | 40.0% | |
! | AAGGCTCAAGGGTTTGTTTA+CGG | + | chr3.2:69675265-69675284 | MS.gene69697:CDS | 40.0% |
! | AATGGTGGAAGGATAAGGTT+AGG | + | chr3.2:69675341-69675360 | MS.gene69697:CDS | 40.0% |
! | ATCGGTTTACCGAAAGATCA+AGG | + | chr3.2:69675610-69675629 | MS.gene69697:CDS | 40.0% |
! | CCTTACAAGCTTGCGAATTT+TGG | - | chr3.2:69675728-69675747 | None:intergenic | 40.0% |
! | GAAAATGATGGAGGTTTGCA+AGG | + | chr3.2:69675246-69675265 | MS.gene69697:CDS | 40.0% |
! | GGCTCTTCTTCATCTGATTT+TGG | + | chr3.2:69676225-69676244 | MS.gene69697:CDS | 40.0% |
!! | CGAATTTTGATGTGGAGGAA+CGG | + | chr3.2:69675932-69675951 | MS.gene69697:CDS | 40.0% |
!! | CTTGCGAATTTTGGCAATGT+CGG | - | chr3.2:69675719-69675738 | None:intergenic | 40.0% |
!! | TCTTTCGGTAAACCGATTTG+GGG | - | chr3.2:69675607-69675626 | None:intergenic | 40.0% |
!! | TTGCGAATTTTGGCAATGTC+GGG | - | chr3.2:69675718-69675737 | None:intergenic | 40.0% |
AAAGGAGCAAGTCAAACCGA+AGG | + | chr3.2:69675129-69675148 | MS.gene69697:CDS | 45.0% | |
AAGATGTCAAGGGCTCAAGA+TGG | + | chr3.2:69675205-69675224 | MS.gene69697:CDS | 45.0% | |
AAGCTGACAATGCAATTCCG+GGG | + | chr3.2:69675401-69675420 | MS.gene69697:CDS | 45.0% | |
AAGGTTAGGTTTGACCGCAA+CGG | + | chr3.2:69675355-69675374 | MS.gene69697:CDS | 45.0% | |
AATGGCTCAGCCGGTTAATA+TGG | + | chr3.2:69676317-69676336 | MS.gene69697:CDS | 45.0% | |
ACTTGGATTTCGTGAGGAAG+CGG | + | chr3.2:69676064-69676083 | MS.gene69697:CDS | 45.0% | |
ATATTAACCGGCTGAGCCAT+TGG | - | chr3.2:69676318-69676337 | None:intergenic | 45.0% | |
CAAGCTGACAATGCAATTCC+GGG | + | chr3.2:69675400-69675419 | MS.gene69697:CDS | 45.0% | |
CATGCCTTCTTCAGATCATG+AGG | - | chr3.2:69675655-69675674 | None:intergenic | 45.0% | |
CCAAGCTGACAATGCAATTC+CGG | + | chr3.2:69675399-69675418 | MS.gene69697:CDS | 45.0% | |
CCACCTTCCATCGATATAAC+TGG | + | chr3.2:69676342-69676361 | MS.gene69697:CDS | 45.0% | |
CCAGTTATATCGATGGAAGG+TGG | - | chr3.2:69676345-69676364 | None:intergenic | 45.0% | |
CCTTATAGCCAAGCTCACAT+CGG | + | chr3.2:69676150-69676169 | MS.gene69697:CDS | 45.0% | |
CTCATGATCTGAAGAAGGCA+TGG | + | chr3.2:69675653-69675672 | MS.gene69697:CDS | 45.0% | |
CTTCCTCACGAAATCCAAGT+TGG | - | chr3.2:69676064-69676083 | None:intergenic | 45.0% | |
GACTTTCGCAATGAAGGAAG+AGG | + | chr3.2:69676032-69676051 | MS.gene69697:CDS | 45.0% | |
GAGAATTACTTCAGGGGTCA+AGG | + | chr3.2:69676522-69676541 | MS.gene69697:CDS | 45.0% | |
GATGGTGAGAAAAGGATTGG+TGG | + | chr3.2:69676381-69676400 | MS.gene69697:CDS | 45.0% | |
GCTTGCAATCGTCAATCAAG+AGG | + | chr3.2:69675798-69675817 | MS.gene69697:CDS | 45.0% | |
GGCAATGAGTATGATGTCGA+TGG | + | chr3.2:69675895-69675914 | MS.gene69697:CDS | 45.0% | |
GGTAATATCCCCCTCAACTT+GGG | - | chr3.2:69674996-69675015 | None:intergenic | 45.0% | |
GGTGCTTCTCAAGCGATTAA+AGG | + | chr3.2:69675111-69675130 | MS.gene69697:CDS | 45.0% | |
GTAATATCCCCCTCAACTTG+GGG | - | chr3.2:69674995-69675014 | None:intergenic | 45.0% | |
GTCAGCTTGGTACTTGGATA+TGG | - | chr3.2:69675389-69675408 | None:intergenic | 45.0% | |
TCAGCAGACTTTCGCAATGA+AGG | + | chr3.2:69676026-69676045 | MS.gene69697:CDS | 45.0% | |
TCTCTCCATCATCCCAATGT+TGG | - | chr3.2:69675983-69676002 | None:intergenic | 45.0% | |
TGACCAACTTGGATTTCGTG+AGG | + | chr3.2:69676058-69676077 | MS.gene69697:CDS | 45.0% | |
TGCAATCGTCAATCAAGAGG+AGG | + | chr3.2:69675801-69675820 | MS.gene69697:CDS | 45.0% | |
TGCAGATAAGAGAGAACCCA+AGG | - | chr3.2:69675491-69675510 | None:intergenic | 45.0% | |
TGCATTGTCAGCTTGGTACT+TGG | - | chr3.2:69675395-69675414 | None:intergenic | 45.0% | |
TTACTTCAGGGGTCAAGGAA+TGG | + | chr3.2:69676527-69676546 | MS.gene69697:CDS | 45.0% | |
TTCGGTTGAACGAATGACTG+AGG | - | chr3.2:69676294-69676313 | None:intergenic | 45.0% | |
TTGATTGACGATTGCAAGCC+AGG | - | chr3.2:69675797-69675816 | None:intergenic | 45.0% | |
TTGCCTTCATTGATGCCGAA+AGG | - | chr3.2:69675880-69675899 | None:intergenic | 45.0% | |
! | AATGATGGAGGCAATCCGAT+CGG | + | chr3.2:69675427-69675446 | MS.gene69697:CDS | 45.0% |
! | AGGCTCAAGGGTTTGTTTAC+GGG | + | chr3.2:69675266-69675285 | MS.gene69697:CDS | 45.0% |
! | CAAGATGTGATTTTCCGCTG+CGG | - | chr3.2:69676472-69676491 | None:intergenic | 45.0% |
! | GGACTTGGAGTTTCTGAAGA+TGG | + | chr3.2:69676363-69676382 | MS.gene69697:CDS | 45.0% |
! | TGATCTGAAGAAGGCATGGA+AGG | + | chr3.2:69675657-69675676 | MS.gene69697:CDS | 45.0% |
! | TTTTCCAGACAGGGCTTCTA+GGG | + | chr3.2:69676173-69676192 | MS.gene69697:CDS | 45.0% |
!! | AGAGGAGCCGAATTTTGATG+TGG | + | chr3.2:69675924-69675943 | MS.gene69697:CDS | 45.0% |
!!! | TCACATCGGTTTTCCAGACA+GGG | + | chr3.2:69676164-69676183 | MS.gene69697:CDS | 45.0% |
AAAGGTCCAGCTGCGACAAA+TGG | - | chr3.2:69675862-69675881 | None:intergenic | 50.0% | |
AAGGTCCAGCTGCGACAAAT+GGG | - | chr3.2:69675861-69675880 | None:intergenic | 50.0% | |
AGAAAGGAAAGCCTGTGACC+GGG | + | chr3.2:69675299-69675318 | MS.gene69697:CDS | 50.0% | |
AGGCGGTTTCCATTGGAGAA+GGG | + | chr3.2:69675538-69675557 | MS.gene69697:CDS | 50.0% | |
ATGGAGGTTTGCAAGGCTCA+AGG | + | chr3.2:69675253-69675272 | MS.gene69697:CDS | 50.0% | |
ATTCCGGGGAAGAATGATGG+AGG | + | chr3.2:69675415-69675434 | MS.gene69697:CDS | 50.0% | |
CATCGGATAATCTCCGCGAA+TGG | + | chr3.2:69675323-69675342 | MS.gene69697:CDS | 50.0% | |
CCGATGTGAGCTTGGCTATA+AGG | - | chr3.2:69676153-69676172 | None:intergenic | 50.0% | |
CCGGAATTGCATTGTCAGCT+TGG | - | chr3.2:69675402-69675421 | None:intergenic | 50.0% | |
CCTTATCCTTCCACCATTCG+CGG | - | chr3.2:69675339-69675358 | None:intergenic | 50.0% | |
CGGTAATATCCCCCTCAACT+TGG | - | chr3.2:69674997-69675016 | None:intergenic | 50.0% | |
CTGGAAAACCGATGTGAGCT+TGG | - | chr3.2:69676161-69676180 | None:intergenic | 50.0% | |
GAGAAAGGAAAGCCTGTGAC+CGG | + | chr3.2:69675298-69675317 | MS.gene69697:CDS | 50.0% | |
GAGCAAGTCAAACCGAAGGA+AGG | + | chr3.2:69675133-69675152 | MS.gene69697:CDS | 50.0% | |
GCAATTCCGGGGAAGAATGA+TGG | + | chr3.2:69675412-69675431 | MS.gene69697:CDS | 50.0% | |
GGACCTTTCGGCATCAATGA+AGG | + | chr3.2:69675874-69675893 | MS.gene69697:CDS | 50.0% | |
GGTCACAGGCTTTCCTTTCT+CGG | - | chr3.2:69675299-69675318 | None:intergenic | 50.0% | |
GTCACAGGCTTTCCTTTCTC+GGG | - | chr3.2:69675298-69675317 | None:intergenic | 50.0% | |
TACGGGATCATTCCCGAGAA+AGG | + | chr3.2:69675283-69675302 | MS.gene69697:CDS | 50.0% | |
TGAGGTTTCTTGTAAGGCGG+AGG | - | chr3.2:69675637-69675656 | None:intergenic | 50.0% | |
TGGAGGTTTGCAAGGCTCAA+GGG | + | chr3.2:69675254-69675273 | MS.gene69697:CDS | 50.0% | |
TGGTACTTGGATATGGCAGC+AGG | - | chr3.2:69675382-69675401 | None:intergenic | 50.0% | |
TTGATGTTGCCGAGCTTGAG+AGG | + | chr3.2:69675071-69675090 | MS.gene69697:CDS | 50.0% | |
TTGCCTCCATCATTCTTCCC+CGG | - | chr3.2:69675421-69675440 | None:intergenic | 50.0% | |
TTTCCTCCTTGCCTGTTCCT+GGG | - | chr3.2:69675185-69675204 | None:intergenic | 50.0% | |
TTTGTCGCAGCTGGACCTTT+CGG | + | chr3.2:69675862-69675881 | MS.gene69697:CDS | 50.0% | |
! | CTGAAGAAGGCATGGAAGGT+TGG | + | chr3.2:69675661-69675680 | MS.gene69697:CDS | 50.0% |
! | GATTTTCCGCTGCGGTTAAG+TGG | - | chr3.2:69676464-69676483 | None:intergenic | 50.0% |
! | GTTTTCCAGACAGGGCTTCT+AGG | + | chr3.2:69676172-69676191 | MS.gene69697:CDS | 50.0% |
! | TAATCTCCGCGAATGGTGGA+AGG | + | chr3.2:69675330-69675349 | MS.gene69697:CDS | 50.0% |
! | TGCTGAATGCTGCTAGCTTG+CGG | - | chr3.2:69676495-69676514 | None:intergenic | 50.0% |
! | TTTTCCTCCTTGCCTGTTCC+TGG | - | chr3.2:69675186-69675205 | None:intergenic | 50.0% |
!! | GGAGCCGAATTTTGATGTGG+AGG | + | chr3.2:69675927-69675946 | MS.gene69697:CDS | 50.0% |
!! | GGTCAAGGAATGGTGATGGA+AGG | + | chr3.2:69676537-69676556 | MS.gene69697:CDS | 50.0% |
!!! | CTCACATCGGTTTTCCAGAC+AGG | + | chr3.2:69676163-69676182 | MS.gene69697:CDS | 50.0% |
AACACTGTGATCCCCCTCAG+AGG | + | chr3.2:69675518-69675537 | MS.gene69697:CDS | 55.0% | |
AATCCCAGGAACAGGCAAGG+AGG | + | chr3.2:69675179-69675198 | MS.gene69697:CDS | 55.0% | |
ACCGAAACCAATGGCTCAGC+CGG | + | chr3.2:69676308-69676327 | MS.gene69697:CDS | 55.0% | |
ACCGAAGGAAGGATCCGATG+CGG | + | chr3.2:69675144-69675163 | MS.gene69697:CDS | 55.0% | |
AGAGCTGCAGGACACAACCT+TGG | + | chr3.2:69675471-69675490 | MS.gene69697:CDS | 55.0% | |
AGCTTGAGAGGAGGATGTGG+AGG | + | chr3.2:69675083-69675102 | MS.gene69697:CDS | 55.0% | |
AGGATAAAGCTCCCGCGCTA+AGG | - | chr3.2:69675827-69675846 | None:intergenic | 55.0% | |
AGGTCCAGCTGCGACAAATG+GGG | - | chr3.2:69675860-69675879 | None:intergenic | 55.0% | |
ATATGGCAGCAGGACCGTTG+CGG | - | chr3.2:69675372-69675391 | None:intergenic | 55.0% | |
ATCAAGAGGAGGCCTTAGCG+CGG | + | chr3.2:69675812-69675831 | MS.gene69697:CDS | 55.0% | |
ATCCCCCTCAACTTGGGGTT+GGG | - | chr3.2:69674990-69675009 | None:intergenic | 55.0% | |
ATGTTGCCGAGCTTGAGAGG+AGG | + | chr3.2:69675074-69675093 | MS.gene69697:CDS | 55.0% | |
CAATGGAAACCGCCTCTGAG+GGG | - | chr3.2:69675533-69675552 | None:intergenic | 55.0% | |
CACCACTCTTCCTTCCCTGT+AGG | - | chr3.2:69675583-69675602 | None:intergenic | 55.0% | |
CAGCTCTTGCAAGGTGTGAG+GGG | - | chr3.2:69675458-69675477 | None:intergenic | 55.0% | |
CAGGGGTCAAGGAATGGTGA+TGG | + | chr3.2:69676533-69676552 | MS.gene69697:CDS | 55.0% | |
CCAATGGAAACCGCCTCTGA+GGG | - | chr3.2:69675534-69675553 | None:intergenic | 55.0% | |
CCACATCCTCCTCTCAAGCT+CGG | - | chr3.2:69675083-69675102 | None:intergenic | 55.0% | |
CGGATAATCTCCGCGAATGG+TGG | + | chr3.2:69675326-69675345 | MS.gene69697:CDS | 55.0% | |
CTACAGGGAAGGAAGAGTGG+TGG | + | chr3.2:69675581-69675600 | MS.gene69697:CDS | 55.0% | |
GAAAGGAAAGCCTGTGACCG+GGG | + | chr3.2:69675300-69675319 | MS.gene69697:CDS | 55.0% | |
GAAGAGTGGTGGCCCCAAAT+CGG | + | chr3.2:69675592-69675611 | MS.gene69697:CDS | 55.0% | |
GAGCTGCAGGACACAACCTT+GGG | + | chr3.2:69675472-69675491 | MS.gene69697:CDS | 55.0% | |
GAGGAGGATGTGGAGGGATA+AGG | + | chr3.2:69675090-69675109 | MS.gene69697:CDS | 55.0% | |
GAGGCGGTTTCCATTGGAGA+AGG | + | chr3.2:69675537-69675556 | MS.gene69697:CDS | 55.0% | |
GCAGCTCTTGCAAGGTGTGA+GGG | - | chr3.2:69675459-69675478 | None:intergenic | 55.0% | |
GCTAACTGAACCTGAGGCGA+TGG | + | chr3.2:69675021-69675040 | MS.gene69697:CDS | 55.0% | |
GCTTGAGAGGAGGATGTGGA+GGG | + | chr3.2:69675084-69675103 | MS.gene69697:CDS | 55.0% | |
GGAAGAGGCTGTGACCAACT+TGG | + | chr3.2:69676047-69676066 | MS.gene69697:CDS | 55.0% | |
GGAGGAACACCCTTCTCCAA+TGG | - | chr3.2:69675550-69675569 | None:intergenic | 55.0% | |
GGCGGAGGACCTTGATCTTT+CGG | - | chr3.2:69675622-69675641 | None:intergenic | 55.0% | |
GTATCCCTAGAAGCCCTGTC+TGG | - | chr3.2:69676180-69676199 | None:intergenic | 55.0% | |
GTGAGGAAGCGGAAGATCTC+TGG | + | chr3.2:69676075-69676094 | MS.gene69697:CDS | 55.0% | |
TATCCCCCTCAACTTGGGGT+TGG | - | chr3.2:69674991-69675010 | None:intergenic | 55.0% | |
TCACACCTTGCAAGAGCTGC+AGG | + | chr3.2:69675459-69675478 | MS.gene69697:CDS | 55.0% | |
TCCAATGGAAACCGCCTCTG+AGG | - | chr3.2:69675535-69675554 | None:intergenic | 55.0% | |
TCGCCTCAGGTTCAGTTAGC+CGG | - | chr3.2:69675021-69675040 | None:intergenic | 55.0% | |
TCTTCGTCAACCATCGCCTC+AGG | - | chr3.2:69675034-69675053 | None:intergenic | 55.0% | |
TCTTGCAAGGTGTGAGGGGT+TGG | - | chr3.2:69675454-69675473 | None:intergenic | 55.0% | |
TGATGTCGATGGGGGAGAAG+AGG | + | chr3.2:69675906-69675925 | MS.gene69697:CDS | 55.0% | |
TGCAGCTCTTGCAAGGTGTG+AGG | - | chr3.2:69675460-69675479 | None:intergenic | 55.0% | |
TGTGTCCTGCAGCTCTTGCA+AGG | - | chr3.2:69675467-69675486 | None:intergenic | 55.0% | |
TTCCTGGGATTGCCTCTGCT+TGG | - | chr3.2:69675170-69675189 | None:intergenic | 55.0% | |
TTGAGGGGGATATTACCGCC+CGG | + | chr3.2:69674999-69675018 | MS.gene69697:CDS | 55.0% | |
! | AATGGAAACCGCCTCTGAGG+GGG | - | chr3.2:69675532-69675551 | None:intergenic | 55.0% |
! | CCGCGAATGGTGGAAGGATA+AGG | + | chr3.2:69675336-69675355 | MS.gene69697:CDS | 55.0% |
! | CGGCTAAGGAAAGTGCAACC+TGG | + | chr3.2:69675776-69675795 | MS.gene69697:CDS | 55.0% |
!! | ACCGGCTGAGCCATTGGTTT+CGG | - | chr3.2:69676312-69676331 | None:intergenic | 55.0% |
!! | AGAAGGGTGTTCCTCCTCCA+TGG | + | chr3.2:69675554-69675573 | MS.gene69697:CDS | 55.0% |
AAAGCCTGTGACCGGGGCAT+CGG | + | chr3.2:69675306-69675325 | MS.gene69697:CDS | 60.0% | |
ACTGTGATCCCCCTCAGAGG+CGG | + | chr3.2:69675521-69675540 | MS.gene69697:CDS | 60.0% | |
ATCCCCCCATTTGTCGCAGC+TGG | + | chr3.2:69675853-69675872 | MS.gene69697:CDS | 60.0% | |
CCCTCAGAGGCGGTTTCCAT+TGG | + | chr3.2:69675531-69675550 | MS.gene69697:CDS | 60.0% | |
CCGAGCTTGAGAGGAGGATG+TGG | + | chr3.2:69675080-69675099 | MS.gene69697:CDS | 60.0% | |
CGCCTCAGGTTCAGTTAGCC+GGG | - | chr3.2:69675020-69675039 | None:intergenic | 60.0% | |
CTCAGGTTCAGTTAGCCGGG+CGG | - | chr3.2:69675017-69675036 | None:intergenic | 60.0% | |
CTCCTCCATGGTGGCCTACA+GGG | + | chr3.2:69675566-69675585 | MS.gene69697:CDS | 60.0% | |
GCAGAGGCAATCCCAGGAAC+AGG | + | chr3.2:69675171-69675190 | MS.gene69697:CDS | 60.0% | |
GCCGCATCGGATCCTTCCTT+CGG | - | chr3.2:69675148-69675167 | None:intergenic | 60.0% | |
GCGGAGATTATCCGATGCCC+CGG | - | chr3.2:69675320-69675339 | None:intergenic | 60.0% | |
GGCAATCCCAGGAACAGGCA+AGG | + | chr3.2:69675176-69675195 | MS.gene69697:CDS | 60.0% | |
GGCCTACAGGGAAGGAAGAG+TGG | + | chr3.2:69675578-69675597 | MS.gene69697:CDS | 60.0% | |
GGTCCAGCTGCGACAAATGG+GGG | - | chr3.2:69675859-69675878 | None:intergenic | 60.0% | |
GTCCAGCTGCGACAAATGGG+GGG | - | chr3.2:69675858-69675877 | None:intergenic | 60.0% | |
GTGTGAGGGGTTGGACCGAT+CGG | - | chr3.2:69675445-69675464 | None:intergenic | 60.0% | |
TCAAGAGGAGGCCTTAGCGC+GGG | + | chr3.2:69675813-69675832 | MS.gene69697:CDS | 60.0% | |
TCCATGGTGGCCTACAGGGA+AGG | + | chr3.2:69675570-69675589 | MS.gene69697:CDS | 60.0% | |
TCCCCCTCAACTTGGGGTTG+GGG | - | chr3.2:69674989-69675008 | None:intergenic | 60.0% | |
TCCTTCCCTGTAGGCCACCA+TGG | - | chr3.2:69675574-69675593 | None:intergenic | 60.0% | |
TGCTCCCCAACCCCAAGTTG+AGG | + | chr3.2:69674982-69675001 | MS.gene69697:CDS | 60.0% | |
TGGCAGCCACTTAACCGCAG+CGG | + | chr3.2:69676455-69676474 | MS.gene69697:CDS | 60.0% | |
TTATCCGATGCCCCGGTCAC+AGG | - | chr3.2:69675313-69675332 | None:intergenic | 60.0% | |
TTCCCTGTAGGCCACCATGG+AGG | - | chr3.2:69675571-69675590 | None:intergenic | 60.0% | |
TTGCCTCTGCTTGGCCGCAT+CGG | - | chr3.2:69675161-69675180 | None:intergenic | 60.0% | |
! | AGGGTGTTCCTCCTCCATGG+TGG | + | chr3.2:69675557-69675576 | MS.gene69697:CDS | 60.0% |
! | CTCCCCAACCCCAAGTTGAG+GGG | + | chr3.2:69674984-69675003 | MS.gene69697:CDS | 60.0% |
! | GCTCCCCAACCCCAAGTTGA+GGG | + | chr3.2:69674983-69675002 | MS.gene69697:CDS | 60.0% |
! | TCCCCAACCCCAAGTTGAGG+GGG | + | chr3.2:69674985-69675004 | MS.gene69697:CDS | 60.0% |
CCTCCTCCATGGTGGCCTAC+AGG | + | chr3.2:69675565-69675584 | MS.gene69697:CDS | 65.0% | |
CCTGTAGGCCACCATGGAGG+AGG | - | chr3.2:69675568-69675587 | None:intergenic | 65.0% | |
CGCCCGGCTAACTGAACCTG+AGG | + | chr3.2:69675015-69675034 | MS.gene69697:CDS | 65.0% | |
GATCCGATGCGGCCAAGCAG+AGG | + | chr3.2:69675155-69675174 | MS.gene69697:CDS | 65.0% | |
GGCCAAGCAGAGGCAATCCC+AGG | + | chr3.2:69675165-69675184 | MS.gene69697:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 69674950 | 69676583 | 69674950 | ID=MS.gene69697 |
chr3.2 | mRNA | 69674950 | 69676583 | 69674950 | ID=MS.gene69697.t1;Parent=MS.gene69697 |
chr3.2 | exon | 69674950 | 69676583 | 69674950 | ID=MS.gene69697.t1.exon1;Parent=MS.gene69697.t1 |
chr3.2 | CDS | 69674950 | 69676583 | 69674950 | ID=cds.MS.gene69697.t1;Parent=MS.gene69697.t1 |
Gene Sequence |
Protein sequence |