Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69905.t1 | KEH43046.1 | 85.8 | 1129 | 141 | 4 | 1 | 1123 | 1 | 1116 | 0.00E+00 | 1902.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69905.t1 | F4K493 | 45.1 | 1283 | 516 | 22 | 4 | 1122 | 2 | 1260 | 1.4e-281 | 970.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69905.t1 | A0A072VN36 | 85.8 | 1129 | 141 | 4 | 1 | 1123 | 1 | 1116 | 0.0e+00 | 1902.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene69905.t1 | TR | SNF2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69905.t1 | MTR_1g081750 | 85.740 | 1129 | 142 | 5 | 1 | 1123 | 1 | 1116 | 0.0 | 1979 |
| MS.gene69905.t1 | MTR_7g026650 | 66.782 | 1153 | 321 | 16 | 21 | 1122 | 11 | 1152 | 0.0 | 1492 |
| MS.gene69905.t1 | MTR_3g071860 | 72.430 | 856 | 208 | 10 | 292 | 1122 | 414 | 1266 | 0.0 | 1213 |
| MS.gene69905.t1 | MTR_3g071860 | 65.605 | 314 | 94 | 4 | 1 | 300 | 1 | 314 | 1.67e-123 | 410 |
| MS.gene69905.t1 | MTR_5g083300 | 59.485 | 854 | 311 | 17 | 297 | 1122 | 457 | 1303 | 0.0 | 956 |
| MS.gene69905.t1 | MTR_5g083300 | 42.812 | 320 | 145 | 8 | 5 | 299 | 4 | 310 | 1.29e-57 | 218 |
| MS.gene69905.t1 | MTR_5g083300 | 59.485 | 854 | 311 | 17 | 297 | 1122 | 494 | 1340 | 0.0 | 956 |
| MS.gene69905.t1 | MTR_5g083300 | 42.812 | 320 | 145 | 8 | 5 | 299 | 41 | 347 | 1.49e-57 | 218 |
| MS.gene69905.t1 | MTR_7g026620 | 49.933 | 741 | 214 | 17 | 296 | 1026 | 51 | 644 | 0.0 | 609 |
| MS.gene69905.t1 | MTR_7g450820 | 36.200 | 721 | 383 | 18 | 416 | 1103 | 537 | 1213 | 1.23e-116 | 390 |
| MS.gene69905.t1 | MTR_7g029525 | 33.829 | 739 | 441 | 16 | 380 | 1103 | 597 | 1302 | 3.62e-115 | 388 |
| MS.gene69905.t1 | MTR_7g450860 | 34.069 | 725 | 406 | 17 | 416 | 1109 | 574 | 1257 | 3.99e-112 | 379 |
| MS.gene69905.t1 | MTR_7g050445 | 35.262 | 743 | 394 | 21 | 416 | 1118 | 598 | 1293 | 8.16e-112 | 379 |
| MS.gene69905.t1 | MTR_7g450790 | 34.993 | 723 | 406 | 18 | 416 | 1113 | 744 | 1427 | 1.99e-111 | 379 |
| MS.gene69905.t1 | MTR_4g088650 | 33.659 | 716 | 400 | 17 | 416 | 1113 | 548 | 1206 | 5.17e-105 | 358 |
| MS.gene69905.t1 | MTR_7g450780 | 32.375 | 800 | 442 | 23 | 361 | 1109 | 579 | 1330 | 1.49e-100 | 347 |
| MS.gene69905.t1 | MTR_2g437480 | 31.785 | 689 | 383 | 17 | 402 | 1078 | 388 | 1001 | 3.31e-92 | 319 |
| MS.gene69905.t1 | MTR_8g037345 | 31.286 | 700 | 386 | 19 | 394 | 1078 | 233 | 852 | 1.98e-89 | 309 |
| MS.gene69905.t1 | MTR_7g026550 | 35.245 | 593 | 153 | 18 | 414 | 1003 | 3 | 367 | 4.31e-77 | 259 |
| MS.gene69905.t1 | MTR_1g080420 | 25.785 | 605 | 362 | 18 | 536 | 1083 | 576 | 1150 | 3.79e-42 | 169 |
| MS.gene69905.t1 | MTR_1g080420 | 25.785 | 605 | 362 | 18 | 536 | 1083 | 707 | 1281 | 4.17e-42 | 169 |
| MS.gene69905.t1 | MTR_3g071660 | 41.573 | 178 | 52 | 3 | 704 | 880 | 1 | 127 | 4.42e-31 | 119 |
| MS.gene69905.t1 | MTR_8g094070 | 24.522 | 575 | 334 | 20 | 530 | 1070 | 373 | 881 | 1.01e-28 | 125 |
| MS.gene69905.t1 | MTR_5g004720 | 24.333 | 637 | 366 | 24 | 505 | 1108 | 163 | 716 | 1.03e-28 | 125 |
| MS.gene69905.t1 | MTR_8g094070 | 24.522 | 575 | 334 | 20 | 530 | 1070 | 373 | 881 | 1.24e-28 | 125 |
| MS.gene69905.t1 | MTR_5g020000 | 24.821 | 560 | 329 | 19 | 577 | 1121 | 206 | 688 | 1.04e-22 | 105 |
| MS.gene69905.t1 | MTR_3g084600 | 45.082 | 122 | 35 | 2 | 454 | 575 | 15 | 104 | 1.24e-20 | 91.3 |
| MS.gene69905.t1 | MTR_3g106210 | 25.896 | 502 | 288 | 19 | 576 | 1061 | 309 | 742 | 3.39e-19 | 94.7 |
| MS.gene69905.t1 | MTR_3g106210 | 25.896 | 502 | 288 | 19 | 576 | 1061 | 309 | 742 | 3.48e-19 | 94.4 |
| MS.gene69905.t1 | MTR_1g013190 | 27.525 | 505 | 274 | 21 | 577 | 1061 | 308 | 740 | 4.84e-19 | 94.0 |
| MS.gene69905.t1 | MTR_3g106210 | 25.150 | 501 | 293 | 17 | 576 | 1061 | 309 | 742 | 5.33e-19 | 94.0 |
| MS.gene69905.t1 | MTR_3g106210 | 25.150 | 501 | 293 | 17 | 576 | 1061 | 309 | 742 | 5.90e-19 | 93.6 |
| MS.gene69905.t1 | MTR_2g084695 | 28.125 | 288 | 146 | 9 | 759 | 1041 | 9 | 240 | 1.49e-18 | 87.8 |
| MS.gene69905.t1 | MTR_3g071670 | 48.000 | 100 | 16 | 2 | 787 | 886 | 2 | 65 | 1.82e-17 | 78.2 |
| MS.gene69905.t1 | MTR_5g005840 | 23.723 | 548 | 322 | 20 | 577 | 1110 | 385 | 850 | 3.40e-16 | 84.7 |
| MS.gene69905.t1 | MTR_7g026610 | 62.712 | 59 | 20 | 1 | 198 | 254 | 13 | 71 | 1.44e-15 | 73.2 |
| MS.gene69905.t1 | MTR_4g032945 | 66.667 | 48 | 16 | 0 | 100 | 147 | 1 | 48 | 2.14e-15 | 72.4 |
| MS.gene69905.t1 | MTR_4g078495 | 31.737 | 167 | 101 | 4 | 933 | 1092 | 530 | 690 | 1.74e-14 | 79.0 |
| MS.gene69905.t1 | MTR_3g053910 | 24.184 | 521 | 297 | 21 | 569 | 1070 | 587 | 1028 | 2.56e-14 | 78.6 |
| MS.gene69905.t1 | MTR_4g078460 | 31.737 | 167 | 101 | 4 | 933 | 1092 | 816 | 976 | 2.65e-14 | 78.6 |
| MS.gene69905.t1 | MTR_3g053910 | 24.184 | 521 | 297 | 21 | 569 | 1070 | 616 | 1057 | 3.49e-14 | 78.2 |
| MS.gene69905.t1 | MTR_7g026590 | 50.000 | 78 | 36 | 2 | 351 | 426 | 23 | 99 | 1.20e-13 | 68.9 |
| MS.gene69905.t1 | MTR_2g020000 | 22.790 | 509 | 310 | 17 | 577 | 1080 | 213 | 643 | 2.53e-12 | 72.0 |
| MS.gene69905.t1 | MTR_7g090960 | 31.884 | 138 | 88 | 3 | 942 | 1079 | 1129 | 1260 | 2.43e-11 | 68.9 |
| MS.gene69905.t1 | MTR_7g090960 | 31.884 | 138 | 88 | 3 | 942 | 1079 | 1210 | 1341 | 2.46e-11 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69905.t1 | AT3G42670 | 57.232 | 802 | 297 | 12 | 352 | 1123 | 472 | 1257 | 0.0 | 893 |
| MS.gene69905.t1 | AT3G42670 | 37.000 | 300 | 160 | 8 | 4 | 290 | 2 | 285 | 1.42e-45 | 180 |
| MS.gene69905.t1 | AT3G42670 | 57.232 | 802 | 295 | 12 | 352 | 1123 | 472 | 1255 | 0.0 | 892 |
| MS.gene69905.t1 | AT3G42670 | 37.000 | 300 | 160 | 8 | 4 | 290 | 2 | 285 | 1.38e-45 | 180 |
| MS.gene69905.t1 | AT3G42670 | 57.232 | 802 | 295 | 12 | 352 | 1123 | 472 | 1255 | 0.0 | 892 |
| MS.gene69905.t1 | AT3G42670 | 37.000 | 300 | 160 | 8 | 4 | 290 | 2 | 285 | 1.38e-45 | 180 |
| MS.gene69905.t1 | AT3G42670 | 57.232 | 802 | 295 | 12 | 352 | 1123 | 472 | 1255 | 0.0 | 892 |
| MS.gene69905.t1 | AT3G42670 | 37.000 | 300 | 160 | 8 | 4 | 290 | 2 | 285 | 1.38e-45 | 180 |
| MS.gene69905.t1 | AT5G20420 | 55.786 | 821 | 327 | 10 | 331 | 1123 | 449 | 1261 | 0.0 | 884 |
| MS.gene69905.t1 | AT5G20420 | 35.443 | 316 | 156 | 8 | 4 | 294 | 2 | 294 | 5.07e-46 | 181 |
| MS.gene69905.t1 | AT1G05490 | 33.241 | 722 | 420 | 18 | 416 | 1107 | 695 | 1384 | 2.19e-107 | 368 |
| MS.gene69905.t1 | AT3G24340 | 32.083 | 720 | 422 | 15 | 405 | 1111 | 449 | 1114 | 1.69e-103 | 352 |
| MS.gene69905.t1 | AT2G16390 | 31.857 | 700 | 387 | 19 | 394 | 1078 | 226 | 850 | 1.48e-88 | 306 |
| MS.gene69905.t1 | AT2G16390 | 31.857 | 700 | 387 | 19 | 394 | 1078 | 223 | 847 | 2.83e-88 | 305 |
| MS.gene69905.t1 | AT2G21450 | 31.902 | 652 | 359 | 20 | 451 | 1078 | 92 | 682 | 1.74e-83 | 288 |
| MS.gene69905.t1 | AT2G21450 | 31.442 | 652 | 362 | 19 | 451 | 1078 | 183 | 773 | 3.41e-83 | 289 |
| MS.gene69905.t1 | AT2G21450 | 31.442 | 652 | 362 | 19 | 451 | 1078 | 190 | 780 | 4.00e-83 | 289 |
| MS.gene69905.t1 | AT3G19210 | 24.493 | 592 | 349 | 21 | 542 | 1102 | 180 | 704 | 6.09e-29 | 125 |
| MS.gene69905.t1 | AT3G19210 | 24.916 | 594 | 346 | 22 | 542 | 1102 | 180 | 706 | 1.02e-28 | 125 |
| MS.gene69905.t1 | AT3G19210 | 24.916 | 594 | 346 | 22 | 542 | 1102 | 180 | 706 | 1.36e-28 | 124 |
| MS.gene69905.t1 | AT1G08600 | 26.567 | 335 | 190 | 12 | 542 | 867 | 719 | 1006 | 1.51e-23 | 108 |
| MS.gene69905.t1 | AT1G08600 | 34.969 | 163 | 94 | 4 | 930 | 1083 | 1123 | 1282 | 9.14e-18 | 90.1 |
| MS.gene69905.t1 | AT1G08600 | 26.567 | 335 | 190 | 12 | 542 | 867 | 719 | 1006 | 1.51e-23 | 108 |
| MS.gene69905.t1 | AT1G08600 | 34.969 | 163 | 94 | 4 | 930 | 1083 | 1123 | 1282 | 9.14e-18 | 90.1 |
| MS.gene69905.t1 | AT1G08600 | 26.567 | 335 | 190 | 12 | 542 | 867 | 719 | 1006 | 1.51e-23 | 108 |
| MS.gene69905.t1 | AT1G08600 | 34.969 | 163 | 94 | 4 | 930 | 1083 | 1123 | 1282 | 9.14e-18 | 90.1 |
| MS.gene69905.t1 | AT5G44800 | 26.482 | 506 | 280 | 22 | 573 | 1061 | 707 | 1137 | 6.34e-22 | 103 |
| MS.gene69905.t1 | AT4G31900 | 23.985 | 542 | 301 | 19 | 532 | 1061 | 214 | 656 | 5.21e-21 | 100 |
| MS.gene69905.t1 | AT4G31900 | 23.985 | 542 | 301 | 19 | 532 | 1061 | 214 | 656 | 5.28e-21 | 100 |
| MS.gene69905.t1 | AT4G31900 | 23.985 | 542 | 301 | 19 | 532 | 1061 | 173 | 615 | 8.37e-21 | 99.8 |
| MS.gene69905.t1 | AT2G25170 | 25.197 | 508 | 284 | 17 | 576 | 1061 | 294 | 727 | 8.96e-19 | 93.2 |
| MS.gene69905.t1 | AT2G25170 | 25.197 | 508 | 284 | 17 | 576 | 1061 | 294 | 727 | 8.96e-19 | 93.2 |
| MS.gene69905.t1 | AT2G25170 | 25.197 | 508 | 284 | 17 | 576 | 1061 | 311 | 744 | 1.07e-18 | 93.2 |
| MS.gene69905.t1 | AT2G25170 | 25.197 | 508 | 284 | 17 | 576 | 1061 | 320 | 753 | 1.14e-18 | 92.8 |
| MS.gene69905.t1 | AT1G08600 | 34.969 | 163 | 94 | 4 | 930 | 1083 | 1102 | 1261 | 8.94e-18 | 90.1 |
| MS.gene69905.t1 | AT1G08600 | 36.782 | 87 | 48 | 3 | 542 | 625 | 719 | 801 | 5.71e-11 | 67.8 |
| MS.gene69905.t1 | AT1G03750 | 30.387 | 181 | 112 | 5 | 920 | 1092 | 523 | 697 | 3.77e-15 | 81.3 |
| MS.gene69905.t1 | AT5G63950 | 31.507 | 146 | 93 | 4 | 926 | 1070 | 716 | 855 | 1.15e-14 | 79.7 |
| MS.gene69905.t1 | AT5G63950 | 31.507 | 146 | 93 | 4 | 926 | 1070 | 733 | 872 | 1.16e-14 | 79.7 |
| MS.gene69905.t1 | AT3G06010 | 23.604 | 555 | 315 | 20 | 577 | 1110 | 425 | 891 | 5.41e-14 | 77.4 |
| MS.gene69905.t1 | AT3G57300 | 32.609 | 138 | 87 | 3 | 942 | 1079 | 1224 | 1355 | 1.06e-12 | 73.6 |
| MS.gene69905.t1 | AT3G57300 | 32.609 | 138 | 87 | 3 | 942 | 1079 | 1224 | 1355 | 1.06e-12 | 73.6 |
| MS.gene69905.t1 | AT3G57300 | 32.609 | 138 | 87 | 3 | 942 | 1079 | 1257 | 1388 | 1.41e-12 | 73.2 |
| MS.gene69905.t1 | AT2G18760 | 32.117 | 137 | 87 | 3 | 942 | 1078 | 745 | 875 | 3.59e-12 | 71.6 |
| MS.gene69905.t1 | AT2G18760 | 32.117 | 137 | 87 | 3 | 942 | 1078 | 745 | 875 | 3.59e-12 | 71.6 |
| MS.gene69905.t1 | AT2G18760 | 32.117 | 137 | 87 | 3 | 942 | 1078 | 745 | 875 | 3.59e-12 | 71.6 |
| MS.gene69905.t1 | AT2G18760 | 32.117 | 137 | 87 | 3 | 942 | 1078 | 745 | 875 | 3.59e-12 | 71.6 |
| MS.gene69905.t1 | AT2G18760 | 32.117 | 137 | 87 | 3 | 942 | 1078 | 745 | 875 | 3.59e-12 | 71.6 |
| MS.gene69905.t1 | AT2G18760 | 32.117 | 137 | 87 | 3 | 942 | 1078 | 745 | 875 | 3.59e-12 | 71.6 |
| MS.gene69905.t1 | AT2G18760 | 32.117 | 137 | 87 | 3 | 942 | 1078 | 804 | 934 | 3.83e-12 | 71.6 |
| MS.gene69905.t1 | AT5G66750 | 29.940 | 167 | 112 | 2 | 942 | 1108 | 542 | 703 | 2.72e-11 | 68.6 |
Find 168 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTTGTTTCAAAACAATTT+TGG | 0.098097 | 1.4:+66229421 | MS.gene69905:CDS |
| TAAGAGAAGGCGGTTGTTTA+AGG | 0.189420 | 1.4:+66227514 | MS.gene69905:CDS |
| CCAGGCAGAACCATTGATTT+TGG | 0.203037 | 1.4:-66229115 | None:intergenic |
| AGAACTTCGTGAATAAATTT+TGG | 0.216798 | 1.4:-66229475 | None:intergenic |
| TGCTTGACACCATTAGAATT+TGG | 0.218550 | 1.4:-66229142 | None:intergenic |
| AACTTTGATGTGGTACTTCT+AGG | 0.221583 | 1.4:-66229346 | None:intergenic |
| CTTATCTTCTGTTCTCATTA+AGG | 0.232667 | 1.4:-66229245 | None:intergenic |
| TATCGATTGGATGAACAAAT+TGG | 0.242680 | 1.4:+66228257 | MS.gene69905:CDS |
| ATATGGATTTGATAGCTTTA+TGG | 0.245952 | 1.4:+66227540 | MS.gene69905:CDS |
| AGACCTCCAATTTCGCTTCT+TGG | 0.261495 | 1.4:-66227371 | None:intergenic |
| TCGACCTGGTCAAGAGAAAA+TGG | 0.262902 | 1.4:+66230299 | MS.gene69905:CDS |
| ACATCAAGTTATCTTCTTGA+TGG | 0.278990 | 1.4:+66227842 | MS.gene69905:CDS |
| TCACTGATAGTTGGATCTTC+TGG | 0.280474 | 1.4:-66227713 | None:intergenic |
| AGTTATTTCGTTGAAGTCTT+TGG | 0.292757 | 1.4:-66227037 | None:intergenic |
| GGTAGGTGACAAGGCTAAAA+TGG | 0.298106 | 1.4:+66228627 | MS.gene69905:intron |
| TAATGGTGTCAAGCATGATT+TGG | 0.304673 | 1.4:+66229150 | MS.gene69905:CDS |
| TATGGATTTGATAGCTTTAT+GGG | 0.316460 | 1.4:+66227541 | MS.gene69905:CDS |
| CCAATGCCAAGAAGCGAAAT+TGG | 0.318140 | 1.4:+66227365 | MS.gene69905:CDS |
| CCAAAGAAAATGATAGTGTT+TGG | 0.318198 | 1.4:+66228753 | MS.gene69905:CDS |
| CATAATCATATGAATAAGTT+TGG | 0.322115 | 1.4:-66230502 | None:intergenic |
| TTGAAGTTCAAAACATTCAT+AGG | 0.322383 | 1.4:-66227290 | None:intergenic |
| AGCAAATTTGATTGGAGAAA+AGG | 0.328059 | 1.4:+66229928 | MS.gene69905:CDS |
| TTGGTGTCGTTGAATGTATC+TGG | 0.339974 | 1.4:-66229096 | None:intergenic |
| AGTTCTTCTGATACTCTTCC+TGG | 0.348560 | 1.4:+66229694 | MS.gene69905:CDS |
| AAAGTTGAGGAAGTGCTTAA+TGG | 0.350370 | 1.4:+66229363 | MS.gene69905:CDS |
| GCAGAAACTGCAAAAGAAAA+TGG | 0.357505 | 1.4:+66229771 | MS.gene69905:CDS |
| GCTCTTCATTGCCACAATCT+AGG | 0.360216 | 1.4:+66227129 | MS.gene69905:CDS |
| CCAATTTCGCTTCTTGGCAT+TGG | 0.361638 | 1.4:-66227365 | None:intergenic |
| AAAATTTATTCACGAAGTTC+TGG | 0.379765 | 1.4:+66229477 | MS.gene69905:CDS |
| TTCATAGGACTACTAATATT+AGG | 0.382189 | 1.4:-66227275 | None:intergenic |
| TGTCTTTCTTCACTGATAGT+TGG | 0.384151 | 1.4:-66227722 | None:intergenic |
| ATATGTCAATTCCAGGTCTT+AGG | 0.387141 | 1.4:-66226671 | None:intergenic |
| AGGTGGTGATAATGTTTCTT+CGG | 0.390951 | 1.4:+66227460 | MS.gene69905:CDS |
| CATGTGTAGAGTGTGGTCTT+TGG | 0.395080 | 1.4:-66229010 | None:intergenic |
| GCGGTTGTTTAAGGAGCATA+TGG | 0.396953 | 1.4:+66227523 | MS.gene69905:CDS |
| TAGGACAAAGCAAATTTGAT+TGG | 0.397697 | 1.4:+66229920 | MS.gene69905:CDS |
| GCTCAAAACAAATCTTACTT+TGG | 0.400942 | 1.4:-66229953 | None:intergenic |
| GGTGGTGATAATGTTTCTTC+GGG | 0.402375 | 1.4:+66227461 | MS.gene69905:CDS |
| AATTCCAGGTCTTAGGAAAC+TGG | 0.403179 | 1.4:-66226664 | None:intergenic |
| CCTGGAGTTCCAAATTCTAA+TGG | 0.403216 | 1.4:+66229133 | MS.gene69905:CDS |
| AAGAAAATGGCGGGCTGTAC+CGG | 0.405933 | 1.4:+66229784 | MS.gene69905:CDS |
| CAAAGAAAATGATAGTGTTT+GGG | 0.407919 | 1.4:+66228754 | MS.gene69905:CDS |
| GGTAGAAAATCCTGATGATT+TGG | 0.409165 | 1.4:+66227787 | MS.gene69905:CDS |
| GTCTTTGGAGCTAGGACTAA+TGG | 0.409580 | 1.4:-66228995 | None:intergenic |
| AATCTTCTCAGCTTGCCATT+TGG | 0.412165 | 1.4:-66230439 | None:intergenic |
| AAAGAGATTCTGCAACTAAC+TGG | 0.420585 | 1.4:+66230087 | MS.gene69905:CDS |
| CTCAACCTCAAGAGAGTAAC+CGG | 0.423138 | 1.4:-66229803 | None:intergenic |
| ATCATGTTCACATGTTTCCT+TGG | 0.426716 | 1.4:-66228234 | None:intergenic |
| CACCCTAGTGTTCTTGTCAT+GGG | 0.427375 | 1.4:+66229205 | MS.gene69905:CDS |
| TCAACTGATGCTACTGATCT+TGG | 0.430086 | 1.4:+66228719 | MS.gene69905:CDS |
| ACGCGCGAGAAAATTCTTCT+TGG | 0.431056 | 1.4:+66229564 | MS.gene69905:CDS |
| AAGGAAGAGGATAATGTGAT+TGG | 0.437162 | 1.4:+66226993 | MS.gene69905:CDS |
| AAGAAAAGAGATGATGAGAA+AGG | 0.450749 | 1.4:-66228939 | None:intergenic |
| ACACCCTAGTGTTCTTGTCA+TGG | 0.450907 | 1.4:+66229204 | MS.gene69905:CDS |
| TTGAACTTCAAATCAGAAAA+CGG | 0.451497 | 1.4:+66227302 | MS.gene69905:CDS |
| CTGATGATTTGGCTGGCATA+TGG | 0.454793 | 1.4:+66227798 | MS.gene69905:CDS |
| AGCACAGATATGTCAATTCC+AGG | 0.458031 | 1.4:-66226678 | None:intergenic |
| ATATCTCATGCTCCTGGAGC+TGG | 0.462480 | 1.4:+66228911 | MS.gene69905:CDS |
| TACTATGAGTTTGTTGTGCA+TGG | 0.462547 | 1.4:-66226587 | None:intergenic |
| TACGTAATGTTCAAGCTGTA+TGG | 0.462591 | 1.4:-66227414 | None:intergenic |
| TATCGATGATCATGAAGAAC+AGG | 0.466478 | 1.4:+66227610 | MS.gene69905:CDS |
| TCTATACTTATCTTCCTCCA+TGG | 0.467124 | 1.4:-66230352 | None:intergenic |
| GCATTTGAAGCAGTATTGAA+TGG | 0.467351 | 1.4:+66226504 | MS.gene69905:intron |
| AGTAAAATTCTCAATGCTGC+TGG | 0.475556 | 1.4:-66229391 | None:intergenic |
| GTATATCACTTGTTGATGAC+TGG | 0.488667 | 1.4:+66230327 | MS.gene69905:CDS |
| AGAGTGTGGTCTTTGGAGCT+AGG | 0.489103 | 1.4:-66229003 | None:intergenic |
| CCATTAGAATTTGGAACTCC+AGG | 0.495262 | 1.4:-66229133 | None:intergenic |
| TACCGCGTCATCTTTAAAGA+AGG | 0.495527 | 1.4:+66227193 | MS.gene69905:CDS |
| CATATGCCAGCCAAATCATC+AGG | 0.497067 | 1.4:-66227797 | None:intergenic |
| ACGTGTGATGAGCAAGGAAA+AGG | 0.497284 | 1.4:+66229984 | MS.gene69905:CDS |
| TATTTCGTTGAAGTCTTTGG+AGG | 0.508106 | 1.4:-66227034 | None:intergenic |
| CAAGCTTGTGCATCAAGTCA+TGG | 0.509179 | 1.4:+66227244 | MS.gene69905:CDS |
| AGATTGTAATGATGAAAAGT+TGG | 0.511319 | 1.4:+66227436 | MS.gene69905:CDS |
| GTAATTTGTCATCAGACATC+CGG | 0.513031 | 1.4:+66226607 | MS.gene69905:CDS |
| GCGCATGGCTAAAGCATTGA+GGG | 0.513248 | 1.4:+66229285 | MS.gene69905:CDS |
| TTCTCAGCTTGCCATTTGGA+AGG | 0.514299 | 1.4:-66230435 | None:intergenic |
| TGCTCCAGTTTCCTAAGACC+TGG | 0.515668 | 1.4:+66226660 | MS.gene69905:CDS |
| TCAATCAATGCTTGTGCTGA+AGG | 0.515842 | 1.4:+66230189 | MS.gene69905:CDS |
| CATGAAATCGACATGAACAT+TGG | 0.516088 | 1.4:-66226920 | None:intergenic |
| CTTGTTGATGACTGGATCCA+TGG | 0.517661 | 1.4:+66230335 | MS.gene69905:CDS |
| GAAGAACAACTTGGAAAGAG+TGG | 0.519766 | 1.4:+66230373 | MS.gene69905:CDS |
| AAGCAGTATTGAATGGCTCA+TGG | 0.520661 | 1.4:+66226511 | MS.gene69905:CDS |
| GAAACGATGCAGTGAAGATA+CGG | 0.521165 | 1.4:+66228661 | MS.gene69905:CDS |
| CCAAAATCAATGGTTCTGCC+TGG | 0.525654 | 1.4:+66229115 | MS.gene69905:CDS |
| TGTGTTATATCTCATGCTCC+TGG | 0.525908 | 1.4:+66228905 | MS.gene69905:CDS |
| TTATCTTCTTGATGGAAATG+AGG | 0.528274 | 1.4:+66227850 | MS.gene69905:CDS |
| TATGATGATCAAGGTTCACT+TGG | 0.538490 | 1.4:+66226951 | MS.gene69905:CDS |
| TTCAACGACACCAAAATCAA+TGG | 0.539455 | 1.4:+66229105 | MS.gene69905:CDS |
| AAGATCAAGAAAAGCTACTT+CGG | 0.541838 | 1.4:+66226632 | MS.gene69905:CDS |
| CTGTACCGGTTACTCTCTTG+AGG | 0.542553 | 1.4:+66229798 | MS.gene69905:CDS |
| TGATGATTTGGCTGGCATAT+GGG | 0.542896 | 1.4:+66227799 | MS.gene69905:CDS |
| AAGCTTGTGCATCAAGTCAT+GGG | 0.544950 | 1.4:+66227245 | MS.gene69905:CDS |
| AATGTATATATTTGCAAACC+AGG | 0.552272 | 1.4:-66229712 | None:intergenic |
| GAAAATCCTGATGATTTGGC+TGG | 0.557990 | 1.4:+66227791 | MS.gene69905:CDS |
| GAAGAAGAGCTCAAGAGACT+AGG | 0.559597 | 1.4:+66229901 | MS.gene69905:CDS |
| GTCTAGAAAAGATCAAAAGC+TGG | 0.560297 | 1.4:+66229176 | MS.gene69905:CDS |
| TTACGATAATTAGCATCGAA+TGG | 0.560548 | 1.4:-66226014 | None:intergenic |
| AAGAACAACTTGGAAAGAGT+GGG | 0.562799 | 1.4:+66230374 | MS.gene69905:CDS |
| TTAGATTCTAAGTACAGAAG+AGG | 0.564016 | 1.4:+66229505 | MS.gene69905:CDS |
| AGATTGAAGATGAAATACTC+AGG | 0.564407 | 1.4:+66230457 | MS.gene69905:CDS |
| TTGTTGAAGATCCTTCCAAA+TGG | 0.564563 | 1.4:+66230424 | MS.gene69905:CDS |
| TGACACAAATAAAGAATCCA+AGG | 0.564564 | 1.4:+66228217 | MS.gene69905:CDS |
| CGTATCGGAAAGCGGTGATG+AGG | 0.568686 | 1.4:+66227766 | MS.gene69905:CDS |
| TCATCAAGTATCAAGAGTCC+AGG | 0.569191 | 1.4:-66229313 | None:intergenic |
| TAACCCATGACAAGAACACT+AGG | 0.569323 | 1.4:-66229208 | None:intergenic |
| GCGCGTGCCTCTAGTAAATG+AGG | 0.571994 | 1.4:-66229547 | None:intergenic |
| AGCGCATGGCTAAAGCATTG+AGG | 0.574680 | 1.4:+66229284 | MS.gene69905:CDS |
| TGCTCATCACACGTGAGATT+AGG | 0.575173 | 1.4:-66229975 | None:intergenic |
| GGAAGTAATCGATGCTTACA+TGG | 0.577289 | 1.4:+66227673 | MS.gene69905:CDS |
| CACAATCTCGTGTTGTTCAG+TGG | 0.577292 | 1.4:-66229749 | None:intergenic |
| GGTTGCATTCGTCATAAGAT+CGG | 0.577482 | 1.4:+66227214 | MS.gene69905:CDS |
| GAACATTGGTTATATTTGTG+AGG | 0.579746 | 1.4:-66226906 | None:intergenic |
| AAACTGCAAAAGAAAATGGC+GGG | 0.587027 | 1.4:+66229775 | MS.gene69905:CDS |
| GTATCTGGCTTCGACAGCTG+TGG | 0.588022 | 1.4:-66229081 | None:intergenic |
| ATATCCAATGGTAGGTGACA+AGG | 0.588447 | 1.4:+66228618 | MS.gene69905:intron |
| AGCAGTATTGAATGGCTCAT+GGG | 0.590169 | 1.4:+66226512 | MS.gene69905:CDS |
| AAAGCATTGAGGGAAAGTCC+TGG | 0.590693 | 1.4:+66229295 | MS.gene69905:CDS |
| GCACTTCCTCAACTTTGATG+TGG | 0.590805 | 1.4:-66229356 | None:intergenic |
| CCGAAAAGTAACCTAGATTG+TGG | 0.592635 | 1.4:-66227140 | None:intergenic |
| AGATGAAATACTCAGGGAGA+TGG | 0.595348 | 1.4:+66230464 | MS.gene69905:CDS |
| CTTCAACGAAATAACTGTGA+AGG | 0.595665 | 1.4:+66227044 | MS.gene69905:CDS |
| AAAATGGAATATTCACGTGC+CGG | 0.596118 | 1.4:+66229048 | MS.gene69905:CDS |
| ATGCCAAGAAGCGAAATTGG+AGG | 0.597152 | 1.4:+66227368 | MS.gene69905:CDS |
| GAAGTGATACAATCCAAAGA+AGG | 0.597670 | 1.4:+66227563 | MS.gene69905:CDS |
| AGCATCGATTACTTCCTCGC+AGG | 0.600178 | 1.4:-66227666 | None:intergenic |
| GATAAATTTGAAGATCGTTG+TGG | 0.605781 | 1.4:+66230144 | MS.gene69905:CDS |
| TGATAGTTGGATCTTCTGGT+AGG | 0.608458 | 1.4:-66227709 | None:intergenic |
| TGGACTCTTGATACTTGATG+AGG | 0.608858 | 1.4:+66229315 | MS.gene69905:CDS |
| GGAATATACTGCCGTACATG+CGG | 0.610029 | 1.4:+66228278 | MS.gene69905:CDS |
| ACTCAGGGAGATGGTTGAAG+AGG | 0.610175 | 1.4:+66230473 | MS.gene69905:CDS |
| AGATGACGCGGTAACAAACC+AGG | 0.611437 | 1.4:-66227183 | None:intergenic |
| ACAGGGTGCAAATGCTGATG+AGG | 0.611917 | 1.4:+66228187 | MS.gene69905:intron |
| AAAGAAAACGTATCGGAAAG+CGG | 0.612337 | 1.4:+66227758 | MS.gene69905:CDS |
| CAAAGACCACACTCTACACA+TGG | 0.613075 | 1.4:+66229011 | MS.gene69905:CDS |
| CAGAAGAGGCAAACTAGAGG+AGG | 0.618526 | 1.4:+66229519 | MS.gene69905:CDS |
| AAATTCACACAGAAAGCGCA+TGG | 0.619203 | 1.4:+66229270 | MS.gene69905:CDS |
| CACTCGGGTCAATACACCCA+TGG | 0.621032 | 1.4:+66229836 | MS.gene69905:CDS |
| GAGCATGATTATGACGGAGA+AGG | 0.621402 | 1.4:+66227332 | MS.gene69905:CDS |
| AATCTCACGTGTGATGAGCA+AGG | 0.622148 | 1.4:+66229978 | MS.gene69905:CDS |
| TCACTTGAGCATGATTATGA+CGG | 0.623465 | 1.4:+66227326 | MS.gene69905:CDS |
| GATTGAAGATGAAATACTCA+GGG | 0.623647 | 1.4:+66230458 | MS.gene69905:CDS |
| CATGAAGAACAGGATCATAG+AGG | 0.626014 | 1.4:+66227620 | MS.gene69905:CDS |
| GCACAAAGAAGCTTAAGAGA+AGG | 0.628810 | 1.4:+66227501 | MS.gene69905:CDS |
| AATGAACTCAAATATTGATG+CGG | 0.633014 | 1.4:+66229603 | MS.gene69905:CDS |
| ATGTGAACATGATTATCGAT+TGG | 0.633134 | 1.4:+66228244 | MS.gene69905:CDS |
| GAAACTGCAAAAGAAAATGG+CGG | 0.634136 | 1.4:+66229774 | MS.gene69905:CDS |
| ATAAGTATAGAAGAACAACT+TGG | 0.635251 | 1.4:+66230364 | MS.gene69905:CDS |
| GTACAGAAGAGGCAAACTAG+AGG | 0.636952 | 1.4:+66229516 | MS.gene69905:CDS |
| GGACTCTTGATACTTGATGA+GGG | 0.637751 | 1.4:+66229316 | MS.gene69905:CDS |
| GAATGGCTCATGGGAACCTG+TGG | 0.639123 | 1.4:+66226521 | MS.gene69905:CDS |
| AAAGAGAAATCTGACACAAG+TGG | 0.641751 | 1.4:+66228878 | MS.gene69905:CDS |
| GTCACAACCTTGCACCAGTG+AGG | 0.646068 | 1.4:+66230019 | MS.gene69905:CDS |
| CAAAGAAGCTTAAGAGAAGG+CGG | 0.649437 | 1.4:+66227504 | MS.gene69905:CDS |
| TGTAATGATGAAAAGTTGGA+AGG | 0.659731 | 1.4:+66227440 | MS.gene69905:CDS |
| GAAGTACCACATCAAAGTTG+AGG | 0.659873 | 1.4:+66229350 | MS.gene69905:CDS |
| GCACGAGAAAGAAAACGTAT+CGG | 0.662619 | 1.4:+66227751 | MS.gene69905:CDS |
| AACCTTCTTTAAAGATGACG+CGG | 0.674091 | 1.4:-66227195 | None:intergenic |
| GGAAGCACCTCATTTACTAG+AGG | 0.675139 | 1.4:+66229540 | MS.gene69905:CDS |
| GTCTACGACGCTCAAAACGT+AGG | 0.683290 | 1.4:+66227390 | MS.gene69905:CDS |
| CAGCTGTGGATAAGATACAC+CGG | 0.684401 | 1.4:-66229067 | None:intergenic |
| GAGAAATCTGACACAAGTGG+TGG | 0.685073 | 1.4:+66228881 | MS.gene69905:CDS |
| AACCCATGACAAGAACACTA+GGG | 0.686530 | 1.4:-66229207 | None:intergenic |
| TTGTGCATGGAGGAAATGCA+TGG | 0.694956 | 1.4:-66226574 | None:intergenic |
| AATGATGAAAAGTTGGAAGG+TGG | 0.696462 | 1.4:+66227443 | MS.gene69905:CDS |
| TATGAGTTTGTTGTGCATGG+AGG | 0.703519 | 1.4:-66226584 | None:intergenic |
| ATGACGGAGAAGGTGCAATG+CGG | 0.752637 | 1.4:+66227342 | MS.gene69905:CDS |
| GTTAAATGCTGATACCTGCG+AGG | 0.758695 | 1.4:+66227652 | MS.gene69905:CDS |
| GTTGATGACTGGATCCATGG+AGG | 0.768053 | 1.4:+66230338 | MS.gene69905:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAATAAATGTATACAGA+AGG | - | chr1.4:66226806-66226825 | None:intergenic | 15.0% |
| !! | AATCATGATTAATTTCTTAT+TGG | - | chr1.4:66226303-66226322 | None:intergenic | 15.0% |
| !! | ATATGACAATTATGATTTAT+AGG | + | chr1.4:66228051-66228070 | MS.gene69905:intron | 15.0% |
| !!! | GATTTAAATACGTTATTTTT+TGG | + | chr1.4:66228108-66228127 | MS.gene69905:intron | 15.0% |
| !!! | TTGATGCAAATAATTTTTTT+CGG | - | chr1.4:66225985-66226004 | None:intergenic | 15.0% |
| !! | AACTATTAAATACCATAACA+GGG | + | chr1.4:66228170-66228189 | MS.gene69905:intron | 20.0% |
| !! | AGTTTATGTTAATGAATTAC+CGG | - | chr1.4:66226277-66226296 | None:intergenic | 20.0% |
| !! | CATAATCATATGAATAAGTT+TGG | - | chr1.4:66230505-66230524 | None:intergenic | 20.0% |
| !! | TGTAAATTAAGTTCCTTATT+TGG | + | chr1.4:66228518-66228537 | MS.gene69905:intron | 20.0% |
| !! | TGTTTAGAAATAAGAATTAG+AGG | - | chr1.4:66226484-66226503 | None:intergenic | 20.0% |
| !!! | AACTCATAAAAATTGATTCT+GGG | + | chr1.4:66226544-66226563 | MS.gene69905:CDS | 20.0% |
| !!! | ACTTTGTTTCAAAACAATTT+TGG | + | chr1.4:66229421-66229440 | MS.gene69905:CDS | 20.0% |
| !!! | CTTTGTTTCAAAACAATTTT+GGG | + | chr1.4:66229422-66229441 | MS.gene69905:CDS | 20.0% |
| !!! | GTAAAACATTTTATACAGAT+AGG | - | chr1.4:66227956-66227975 | None:intergenic | 20.0% |
| !!! | TAATTACAAGTTTGAAATCA+CGG | - | chr1.4:66228494-66228513 | None:intergenic | 20.0% |
| !!! | TGAAGTTAATTCTTTTAGAA+GGG | + | chr1.4:66227091-66227110 | MS.gene69905:CDS | 20.0% |
| !!! | TGATGCAAATAATTTTTTTC+GGG | - | chr1.4:66225984-66226003 | None:intergenic | 20.0% |
| !!! | TTGTTACATATTTTCTCTAT+TGG | + | chr1.4:66228584-66228603 | MS.gene69905:intron | 20.0% |
| !!! | TTTGTTTCAAAACAATTTTG+GGG | + | chr1.4:66229423-66229442 | MS.gene69905:CDS | 20.0% |
| !!! | TTTTTTACTTGACTTACAAT+GGG | - | chr1.4:66228338-66228357 | None:intergenic | 20.0% |
| ! | AAAACATATCCAACCAAATA+AGG | - | chr1.4:66228534-66228553 | None:intergenic | 25.0% |
| ! | AAAATTTATTCACGAAGTTC+TGG | + | chr1.4:66229477-66229496 | MS.gene69905:CDS | 25.0% |
| ! | AATGAACTCAAATATTGATG+CGG | + | chr1.4:66229603-66229622 | MS.gene69905:CDS | 25.0% |
| ! | AATGTAATTGACAATCTTGT+AGG | + | chr1.4:66226385-66226404 | MS.gene69905:intron | 25.0% |
| ! | AATGTATATATTTGCAAACC+AGG | - | chr1.4:66229715-66229734 | None:intergenic | 25.0% |
| ! | AGATTGTAATGATGAAAAGT+TGG | + | chr1.4:66227436-66227455 | MS.gene69905:CDS | 25.0% |
| ! | ATAAGTATAGAAGAACAACT+TGG | + | chr1.4:66230364-66230383 | MS.gene69905:CDS | 25.0% |
| ! | CAACTATTAAATACCATAAC+AGG | + | chr1.4:66228169-66228188 | MS.gene69905:intron | 25.0% |
| ! | GTTGTCTAATTTATATCCAA+TGG | + | chr1.4:66228606-66228625 | MS.gene69905:intron | 25.0% |
| ! | TCTAATTTATATCCAATGGT+AGG | + | chr1.4:66228610-66228629 | MS.gene69905:intron | 25.0% |
| ! | TGACAATTATGATTTATAGG+CGG | + | chr1.4:66228054-66228073 | MS.gene69905:intron | 25.0% |
| ! | TTCATAGGACTACTAATATT+AGG | - | chr1.4:66227278-66227297 | None:intergenic | 25.0% |
| ! | TTGAACTTCAAATCAGAAAA+CGG | + | chr1.4:66227302-66227321 | MS.gene69905:CDS | 25.0% |
| ! | TTGAAGTTCAAAACATTCAT+AGG | - | chr1.4:66227293-66227312 | None:intergenic | 25.0% |
| !! | AATCATTTTCAGTGGAAAAA+TGG | + | chr1.4:66230063-66230082 | MS.gene69905:CDS | 25.0% |
| !! | AATTAAGTTCCTTATTTGGT+TGG | + | chr1.4:66228522-66228541 | MS.gene69905:intron | 25.0% |
| !! | AGAACTTCGTGAATAAATTT+TGG | - | chr1.4:66229478-66229497 | None:intergenic | 25.0% |
| !! | ATATGGATTTGATAGCTTTA+TGG | + | chr1.4:66227540-66227559 | MS.gene69905:CDS | 25.0% |
| !! | CAAAGAAAATGATAGTGTTT+GGG | + | chr1.4:66228754-66228773 | MS.gene69905:CDS | 25.0% |
| !! | CTATCATTTTCTTTGGATAT+TGG | - | chr1.4:66228749-66228768 | None:intergenic | 25.0% |
| !! | CTGAAGTTAATTCTTTTAGA+AGG | + | chr1.4:66227090-66227109 | MS.gene69905:CDS | 25.0% |
| !! | GAACTCATAAAAATTGATTC+TGG | + | chr1.4:66226543-66226562 | MS.gene69905:CDS | 25.0% |
| !! | GTAAACTTTTATGATGATCA+AGG | + | chr1.4:66226942-66226961 | MS.gene69905:CDS | 25.0% |
| !! | GTATGATATATTTAAGATGC+CGG | + | chr1.4:66226255-66226274 | MS.gene69905:intron | 25.0% |
| !! | TATTTGACTTCAACCATAAA+TGG | - | chr1.4:66228022-66228041 | None:intergenic | 25.0% |
| !! | TATTTGAGAATCATTTTCAG+TGG | + | chr1.4:66230055-66230074 | MS.gene69905:CDS | 25.0% |
| !!! | GTTTTTTACTTGACTTACAA+TGG | - | chr1.4:66228339-66228358 | None:intergenic | 25.0% |
| !!! | TATGGATTTGATAGCTTTAT+GGG | + | chr1.4:66227541-66227560 | MS.gene69905:CDS | 25.0% |
| !!! | TGGTTTTATCGTCTATTTTA+AGG | + | chr1.4:66228128-66228147 | MS.gene69905:intron | 25.0% |
| AACTCTATTAAAAACCTCAC+TGG | - | chr1.4:66230036-66230055 | None:intergenic | 30.0% | |
| AAGAAAAGAGATGATGAGAA+AGG | - | chr1.4:66228942-66228961 | None:intergenic | 30.0% | |
| AAGATCAAGAAAAGCTACTT+CGG | + | chr1.4:66226632-66226651 | MS.gene69905:CDS | 30.0% | |
| ACATCAAGTTATCTTCTTGA+TGG | + | chr1.4:66227842-66227861 | MS.gene69905:CDS | 30.0% | |
| AGATTGAAGATGAAATACTC+AGG | + | chr1.4:66230457-66230476 | MS.gene69905:CDS | 30.0% | |
| AGCAAATTTGATTGGAGAAA+AGG | + | chr1.4:66229928-66229947 | MS.gene69905:CDS | 30.0% | |
| AGTAAGAAGATTGAACTTAC+TGG | - | chr1.4:66226744-66226763 | None:intergenic | 30.0% | |
| ATACGATAATAGCGCTATAA+TGG | + | chr1.4:66226172-66226191 | MS.gene69905:intron | 30.0% | |
| ATGTGAACATGATTATCGAT+TGG | + | chr1.4:66228244-66228263 | MS.gene69905:CDS | 30.0% | |
| ATTGACTGTTGAACCATTTA+TGG | + | chr1.4:66228006-66228025 | MS.gene69905:intron | 30.0% | |
| ATTGATGCGGAAAAAATGAA+GGG | + | chr1.4:66229616-66229635 | MS.gene69905:CDS | 30.0% | |
| CACTGAAATAAAAACTCTGA+AGG | + | chr1.4:66226974-66226993 | MS.gene69905:CDS | 30.0% | |
| CTTATCTTCTGTTCTCATTA+AGG | - | chr1.4:66229248-66229267 | None:intergenic | 30.0% | |
| GATAAATTTGAAGATCGTTG+TGG | + | chr1.4:66230144-66230163 | MS.gene69905:CDS | 30.0% | |
| GATTGAAGATGAAATACTCA+GGG | + | chr1.4:66230458-66230477 | MS.gene69905:CDS | 30.0% | |
| GTAAGAAGATTGAACTTACT+GGG | - | chr1.4:66226743-66226762 | None:intergenic | 30.0% | |
| TAACTTTCAGAAAATCACAG+TGG | - | chr1.4:66228419-66228438 | None:intergenic | 30.0% | |
| TAGGACAAAGCAAATTTGAT+TGG | + | chr1.4:66229920-66229939 | MS.gene69905:CDS | 30.0% | |
| TATTGATGCGGAAAAAATGA+AGG | + | chr1.4:66229615-66229634 | MS.gene69905:CDS | 30.0% | |
| TGACACAAATAAAGAATCCA+AGG | + | chr1.4:66228217-66228236 | MS.gene69905:CDS | 30.0% | |
| TGTAATGATGAAAAGTTGGA+AGG | + | chr1.4:66227440-66227459 | MS.gene69905:CDS | 30.0% | |
| TTAGATTCTAAGTACAGAAG+AGG | + | chr1.4:66229505-66229524 | MS.gene69905:CDS | 30.0% | |
| TTATCTTCTTGATGGAAATG+AGG | + | chr1.4:66227850-66227869 | MS.gene69905:CDS | 30.0% | |
| ! | AATAAAAACTCTGAAGGAAG+AGG | + | chr1.4:66226980-66226999 | MS.gene69905:CDS | 30.0% |
| ! | AGTTATTTCGTTGAAGTCTT+TGG | - | chr1.4:66227040-66227059 | None:intergenic | 30.0% |
| ! | CCAAACACTATCATTTTCTT+TGG | - | chr1.4:66228756-66228775 | None:intergenic | 30.0% |
| ! | CCAAAGAAAATGATAGTGTT+TGG | + | chr1.4:66228753-66228772 | MS.gene69905:CDS | 30.0% |
| ! | GAACATTGGTTATATTTGTG+AGG | - | chr1.4:66226909-66226928 | None:intergenic | 30.0% |
| ! | GCATTGAGAATTTTACTTTC+TGG | + | chr1.4:66229397-66229416 | MS.gene69905:CDS | 30.0% |
| ! | TAGCTTTTCTTGATCTTATC+CGG | - | chr1.4:66226629-66226648 | None:intergenic | 30.0% |
| ! | TATCGATTGGATGAACAAAT+TGG | + | chr1.4:66228257-66228276 | MS.gene69905:CDS | 30.0% |
| ! | TCAATTTTTATGAGTTCCAC+AGG | - | chr1.4:66226540-66226559 | None:intergenic | 30.0% |
| ! | TTACGATAATTAGCATCGAA+TGG | - | chr1.4:66226017-66226036 | None:intergenic | 30.0% |
| ! | TTCTTGTATGATTTTCAGTG+AGG | + | chr1.4:66230398-66230417 | MS.gene69905:CDS | 30.0% |
| ! | TTCTTTGGAAAAACATTGCA+GGG | + | chr1.4:66228834-66228853 | MS.gene69905:CDS | 30.0% |
| ! | TTTCTTTGGAAAAACATTGC+AGG | + | chr1.4:66228833-66228852 | MS.gene69905:CDS | 30.0% |
| ! | TTTCTTTTGAACACCTTCTT+TGG | - | chr1.4:66227579-66227598 | None:intergenic | 30.0% |
| !! | AAAAAGCTTTCGAGTTTCTT+TGG | + | chr1.4:66228819-66228838 | MS.gene69905:CDS | 30.0% |
| !! | TTCGTGAATAAATTTTGGTC+TGG | - | chr1.4:66229473-66229492 | None:intergenic | 30.0% |
| !!! | ATAGCTTGCTTTGTTTTTGA+AGG | - | chr1.4:66230267-66230286 | None:intergenic | 30.0% |
| !!! | ATCGTCTATTTTAAGGCTAA+AGG | + | chr1.4:66228135-66228154 | MS.gene69905:intron | 30.0% |
| !!! | GTTTTAATTAGCAACGAGTT+TGG | + | chr1.4:66228378-66228397 | MS.gene69905:intron | 30.0% |
| !!! | TTTGTGAGGTTTTTTGTGTA+TGG | - | chr1.4:66226895-66226914 | None:intergenic | 30.0% |
| AAAATGGAATATTCACGTGC+CGG | + | chr1.4:66229048-66229067 | MS.gene69905:CDS | 35.0% | |
| AAACTGCAAAAGAAAATGGC+GGG | + | chr1.4:66229775-66229794 | MS.gene69905:CDS | 35.0% | |
| AAAGAAAACGTATCGGAAAG+CGG | + | chr1.4:66227758-66227777 | MS.gene69905:CDS | 35.0% | |
| AAAGAGAAATCTGACACAAG+TGG | + | chr1.4:66228878-66228897 | MS.gene69905:CDS | 35.0% | |
| AAAGAGATTCTGCAACTAAC+TGG | + | chr1.4:66230087-66230106 | MS.gene69905:CDS | 35.0% | |
| AACTTTGATGTGGTACTTCT+AGG | - | chr1.4:66229349-66229368 | None:intergenic | 35.0% | |
| AAGAACAACTTGGAAAGAGT+GGG | + | chr1.4:66230374-66230393 | MS.gene69905:CDS | 35.0% | |
| AAGGAAGAGGATAATGTGAT+TGG | + | chr1.4:66226993-66227012 | MS.gene69905:CDS | 35.0% | |
| AATGATGAAAAGTTGGAAGG+TGG | + | chr1.4:66227443-66227462 | MS.gene69905:CDS | 35.0% | |
| AGTAAAATTCTCAATGCTGC+TGG | - | chr1.4:66229394-66229413 | None:intergenic | 35.0% | |
| ATATGTCAATTCCAGGTCTT+AGG | - | chr1.4:66226674-66226693 | None:intergenic | 35.0% | |
| ATCATGTTCACATGTTTCCT+TGG | - | chr1.4:66228237-66228256 | None:intergenic | 35.0% | |
| ATGACAAGTAAAAGACGAGA+TGG | - | chr1.4:66227898-66227917 | None:intergenic | 35.0% | |
| CATGAAATCGACATGAACAT+TGG | - | chr1.4:66226923-66226942 | None:intergenic | 35.0% | |
| CTTCAACGAAATAACTGTGA+AGG | + | chr1.4:66227044-66227063 | MS.gene69905:CDS | 35.0% | |
| GAAACTGCAAAAGAAAATGG+CGG | + | chr1.4:66229774-66229793 | MS.gene69905:CDS | 35.0% | |
| GAAGTGATACAATCCAAAGA+AGG | + | chr1.4:66227563-66227582 | MS.gene69905:CDS | 35.0% | |
| GCAGAAACTGCAAAAGAAAA+TGG | + | chr1.4:66229771-66229790 | MS.gene69905:CDS | 35.0% | |
| GGCAAAAAGAGTTCGAAAAA+TGG | + | chr1.4:66229032-66229051 | MS.gene69905:CDS | 35.0% | |
| GGTAGAAAATCCTGATGATT+TGG | + | chr1.4:66227787-66227806 | MS.gene69905:CDS | 35.0% | |
| GTCTAGAAAAGATCAAAAGC+TGG | + | chr1.4:66229176-66229195 | MS.gene69905:CDS | 35.0% | |
| GTGCTTCGAAAAATCACAAA+TGG | + | chr1.4:66229646-66229665 | MS.gene69905:CDS | 35.0% | |
| TAACTAGATGTGCTATGCAT+TGG | + | chr1.4:66226335-66226354 | MS.gene69905:intron | 35.0% | |
| TACGTAATGTTCAAGCTGTA+TGG | - | chr1.4:66227417-66227436 | None:intergenic | 35.0% | |
| TATCGATGATCATGAAGAAC+AGG | + | chr1.4:66227610-66227629 | MS.gene69905:CDS | 35.0% | |
| TATGATGATCAAGGTTCACT+TGG | + | chr1.4:66226951-66226970 | MS.gene69905:CDS | 35.0% | |
| TATTTCGTTGAAGTCTTTGG+AGG | - | chr1.4:66227037-66227056 | None:intergenic | 35.0% | |
| TCACTTGAGCATGATTATGA+CGG | + | chr1.4:66227326-66227345 | MS.gene69905:CDS | 35.0% | |
| TCTATACTTATCTTCCTCCA+TGG | - | chr1.4:66230355-66230374 | None:intergenic | 35.0% | |
| TGACAAGTAAAAGACGAGAT+GGG | - | chr1.4:66227897-66227916 | None:intergenic | 35.0% | |
| TGCTTGACACCATTAGAATT+TGG | - | chr1.4:66229145-66229164 | None:intergenic | 35.0% | |
| TGTCTTTCTTCACTGATAGT+TGG | - | chr1.4:66227725-66227744 | None:intergenic | 35.0% | |
| TTCAACGACACCAAAATCAA+TGG | + | chr1.4:66229105-66229124 | MS.gene69905:CDS | 35.0% | |
| TTGTTGAAGATCCTTCCAAA+TGG | + | chr1.4:66230424-66230443 | MS.gene69905:CDS | 35.0% | |
| ! | AACCTTCTTTAAAGATGACG+CGG | - | chr1.4:66227198-66227217 | None:intergenic | 35.0% |
| ! | AGCTTCAAGAGTGATTTTCT+TGG | + | chr1.4:66230227-66230246 | MS.gene69905:CDS | 35.0% |
| ! | AGGTGGTGATAATGTTTCTT+CGG | + | chr1.4:66227460-66227479 | MS.gene69905:CDS | 35.0% |
| ! | AGTTTTTGTCTGATCTTTCC+TGG | + | chr1.4:66227165-66227184 | MS.gene69905:CDS | 35.0% |
| ! | GCATTTGAAGCAGTATTGAA+TGG | + | chr1.4:66226504-66226523 | MS.gene69905:intron | 35.0% |
| ! | GTAATTTGTCATCAGACATC+CGG | + | chr1.4:66226607-66226626 | MS.gene69905:CDS | 35.0% |
| ! | TAAACCATTTTCTCTTGACC+AGG | - | chr1.4:66230306-66230325 | None:intergenic | 35.0% |
| ! | TAATGGTGTCAAGCATGATT+TGG | + | chr1.4:66229150-66229169 | MS.gene69905:CDS | 35.0% |
| ! | TGATTTTCTTGGATTCTGAG+TGG | + | chr1.4:66230238-66230257 | MS.gene69905:CDS | 35.0% |
| ! | TTACAAGTTTGAAATCACGG+TGG | - | chr1.4:66228491-66228510 | None:intergenic | 35.0% |
| !! | AAAGTTGAGGAAGTGCTTAA+TGG | + | chr1.4:66229363-66229382 | MS.gene69905:CDS | 35.0% |
| !! | AGCGCTATAATGGATATTCA+TGG | + | chr1.4:66226182-66226201 | MS.gene69905:intron | 35.0% |
| !! | GTATATCACTTGTTGATGAC+TGG | + | chr1.4:66230327-66230346 | MS.gene69905:CDS | 35.0% |
| !! | GTTGAGCTTTTGATAACACT+CGG | + | chr1.4:66229820-66229839 | MS.gene69905:CDS | 35.0% |
| !! | TACTATGAGTTTGTTGTGCA+TGG | - | chr1.4:66226590-66226609 | None:intergenic | 35.0% |
| !! | TGCATGTTTTCTTTGAGTTC+AGG | - | chr1.4:66228788-66228807 | None:intergenic | 35.0% |
| !! | TTGAGCTTTTGATAACACTC+GGG | + | chr1.4:66229821-66229840 | MS.gene69905:CDS | 35.0% |
| !!! | CACAATCTAGGTTACTTTTC+GGG | + | chr1.4:66227141-66227160 | MS.gene69905:CDS | 35.0% |
| !!! | CCACAATCTAGGTTACTTTT+CGG | + | chr1.4:66227140-66227159 | MS.gene69905:CDS | 35.0% |
| !!! | CTGCTGTTTTGATTAACCAT+GGG | - | chr1.4:66229855-66229874 | None:intergenic | 35.0% |
| !!! | GAAACTCGAAAGCTTTTTTC+TGG | - | chr1.4:66228817-66228836 | None:intergenic | 35.0% |
| !!! | TCTGCTGTTTTGATTAACCA+TGG | - | chr1.4:66229856-66229875 | None:intergenic | 35.0% |
| AACCCATGACAAGAACACTA+GGG | - | chr1.4:66229210-66229229 | None:intergenic | 40.0% | |
| AAGCTTGTGCATCAAGTCAT+GGG | + | chr1.4:66227245-66227264 | MS.gene69905:CDS | 40.0% | |
| AATCTTCTCAGCTTGCCATT+TGG | - | chr1.4:66230442-66230461 | None:intergenic | 40.0% | |
| AATTCCAGGTCTTAGGAAAC+TGG | - | chr1.4:66226667-66226686 | None:intergenic | 40.0% | |
| AGATGAAATACTCAGGGAGA+TGG | + | chr1.4:66230464-66230483 | MS.gene69905:CDS | 40.0% | |
| AGCACAGATATGTCAATTCC+AGG | - | chr1.4:66226681-66226700 | None:intergenic | 40.0% | |
| AGTTCTTCTGATACTCTTCC+TGG | + | chr1.4:66229694-66229713 | MS.gene69905:CDS | 40.0% | |
| ATATCCAATGGTAGGTGACA+AGG | + | chr1.4:66228618-66228637 | MS.gene69905:intron | 40.0% | |
| CAAAGAAGCTTAAGAGAAGG+CGG | + | chr1.4:66227504-66227523 | MS.gene69905:CDS | 40.0% | |
| CATGAAGAACAGGATCATAG+AGG | + | chr1.4:66227620-66227639 | MS.gene69905:CDS | 40.0% | |
| CCGAAAAGTAACCTAGATTG+TGG | - | chr1.4:66227143-66227162 | None:intergenic | 40.0% | |
| CCTGGAGTTCCAAATTCTAA+TGG | + | chr1.4:66229133-66229152 | MS.gene69905:CDS | 40.0% | |
| GAAAAACATTGCAGGGTCTA+TGG | + | chr1.4:66228841-66228860 | MS.gene69905:CDS | 40.0% | |
| GAAACGATGCAGTGAAGATA+CGG | + | chr1.4:66228661-66228680 | MS.gene69905:CDS | 40.0% | |
| GAAGAACAACTTGGAAAGAG+TGG | + | chr1.4:66230373-66230392 | MS.gene69905:CDS | 40.0% | |
| GATACATGTGTCTAACTCGT+TGG | + | chr1.4:66226217-66226236 | MS.gene69905:intron | 40.0% | |
| GCACAAAGAAGCTTAAGAGA+AGG | + | chr1.4:66227501-66227520 | MS.gene69905:CDS | 40.0% | |
| GCACGAGAAAGAAAACGTAT+CGG | + | chr1.4:66227751-66227770 | MS.gene69905:CDS | 40.0% | |
| GGAAGTAATCGATGCTTACA+TGG | + | chr1.4:66227673-66227692 | MS.gene69905:CDS | 40.0% | |
| GGACTCTTGATACTTGATGA+GGG | + | chr1.4:66229316-66229335 | MS.gene69905:CDS | 40.0% | |
| GGTTGCATTCGTCATAAGAT+CGG | + | chr1.4:66227214-66227233 | MS.gene69905:CDS | 40.0% | |
| TAACCCATGACAAGAACACT+AGG | - | chr1.4:66229211-66229230 | None:intergenic | 40.0% | |
| TAAGAGAAGGCGGTTGTTTA+AGG | + | chr1.4:66227514-66227533 | MS.gene69905:CDS | 40.0% | |
| TCAACTGATGCTACTGATCT+TGG | + | chr1.4:66228719-66228738 | MS.gene69905:CDS | 40.0% | |
| TCAATCAATGCTTGTGCTGA+AGG | + | chr1.4:66230189-66230208 | MS.gene69905:CDS | 40.0% | |
| TCACTGATAGTTGGATCTTC+TGG | - | chr1.4:66227716-66227735 | None:intergenic | 40.0% | |
| TCATCAAGTATCAAGAGTCC+AGG | - | chr1.4:66229316-66229335 | None:intergenic | 40.0% | |
| TGATAGTTGGATCTTCTGGT+AGG | - | chr1.4:66227712-66227731 | None:intergenic | 40.0% | |
| TGGACTCTTGATACTTGATG+AGG | + | chr1.4:66229315-66229334 | MS.gene69905:CDS | 40.0% | |
| TGTGTTATATCTCATGCTCC+TGG | + | chr1.4:66228905-66228924 | MS.gene69905:CDS | 40.0% | |
| TTAAAAACCTCACTGGTGCA+AGG | - | chr1.4:66230029-66230048 | None:intergenic | 40.0% | |
| ! | AAATTCACACAGAAAGCGCA+TGG | + | chr1.4:66229270-66229289 | MS.gene69905:CDS | 40.0% |
| ! | AAGCAGTATTGAATGGCTCA+TGG | + | chr1.4:66226511-66226530 | MS.gene69905:CDS | 40.0% |
| ! | AGCAGTATTGAATGGCTCAT+GGG | + | chr1.4:66226512-66226531 | MS.gene69905:CDS | 40.0% |
| ! | AGGACTAATGGTCTTTTCTG+TGG | - | chr1.4:66228986-66229005 | None:intergenic | 40.0% |
| ! | CCATTAGAATTTGGAACTCC+AGG | - | chr1.4:66229136-66229155 | None:intergenic | 40.0% |
| ! | GAAAATCCTGATGATTTGGC+TGG | + | chr1.4:66227791-66227810 | MS.gene69905:CDS | 40.0% |
| ! | GAAGTACCACATCAAAGTTG+AGG | + | chr1.4:66229350-66229369 | MS.gene69905:CDS | 40.0% |
| ! | GGTGGTGATAATGTTTCTTC+GGG | + | chr1.4:66227461-66227480 | MS.gene69905:CDS | 40.0% |
| ! | TACCGCGTCATCTTTAAAGA+AGG | + | chr1.4:66227193-66227212 | MS.gene69905:CDS | 40.0% |
| ! | TGATGATTTGGCTGGCATAT+GGG | + | chr1.4:66227799-66227818 | MS.gene69905:CDS | 40.0% |
| ! | TTTTCACAAAGCCGCATGTA+CGG | - | chr1.4:66228292-66228311 | None:intergenic | 40.0% |
| ! | TTTTTGCCATGTGTAGAGTG+TGG | - | chr1.4:66229020-66229039 | None:intergenic | 40.0% |
| !! | TATGAGTTTGTTGTGCATGG+AGG | - | chr1.4:66226587-66226606 | None:intergenic | 40.0% |
| !! | TTGGTGTCGTTGAATGTATC+TGG | - | chr1.4:66229099-66229118 | None:intergenic | 40.0% |
| AATCTCACGTGTGATGAGCA+AGG | + | chr1.4:66229978-66229997 | MS.gene69905:CDS | 45.0% | |
| ACACCCTAGTGTTCTTGTCA+TGG | + | chr1.4:66229204-66229223 | MS.gene69905:CDS | 45.0% | |
| ACGCGCGAGAAAATTCTTCT+TGG | + | chr1.4:66229564-66229583 | MS.gene69905:CDS | 45.0% | |
| ACGTGTGATGAGCAAGGAAA+AGG | + | chr1.4:66229984-66230003 | MS.gene69905:CDS | 45.0% | |
| AGACCTCCAATTTCGCTTCT+TGG | - | chr1.4:66227374-66227393 | None:intergenic | 45.0% | |
| ATGCCAAGAAGCGAAATTGG+AGG | + | chr1.4:66227368-66227387 | MS.gene69905:CDS | 45.0% | |
| CAAAGACCACACTCTACACA+TGG | + | chr1.4:66229011-66229030 | MS.gene69905:CDS | 45.0% | |
| CAAGCTTGTGCATCAAGTCA+TGG | + | chr1.4:66227244-66227263 | MS.gene69905:CDS | 45.0% | |
| CACCCTAGTGTTCTTGTCAT+GGG | + | chr1.4:66229205-66229224 | MS.gene69905:CDS | 45.0% | |
| CAGCTGTGGATAAGATACAC+CGG | - | chr1.4:66229070-66229089 | None:intergenic | 45.0% | |
| CATATGCCAGCCAAATCATC+AGG | - | chr1.4:66227800-66227819 | None:intergenic | 45.0% | |
| CATGTGTAGAGTGTGGTCTT+TGG | - | chr1.4:66229013-66229032 | None:intergenic | 45.0% | |
| CCAATGCCAAGAAGCGAAAT+TGG | + | chr1.4:66227365-66227384 | MS.gene69905:CDS | 45.0% | |
| CCAATTTCGCTTCTTGGCAT+TGG | - | chr1.4:66227368-66227387 | None:intergenic | 45.0% | |
| CTCAACCTCAAGAGAGTAAC+CGG | - | chr1.4:66229806-66229825 | None:intergenic | 45.0% | |
| GAAGAAGAGCTCAAGAGACT+AGG | + | chr1.4:66229901-66229920 | MS.gene69905:CDS | 45.0% | |
| GAGAAATCTGACACAAGTGG+TGG | + | chr1.4:66228881-66228900 | MS.gene69905:CDS | 45.0% | |
| GCACTTCCTCAACTTTGATG+TGG | - | chr1.4:66229359-66229378 | None:intergenic | 45.0% | |
| GCTCTTCATTGCCACAATCT+AGG | + | chr1.4:66227129-66227148 | MS.gene69905:CDS | 45.0% | |
| GGAATATACTGCCGTACATG+CGG | + | chr1.4:66228278-66228297 | MS.gene69905:CDS | 45.0% | |
| GGTAGGTGACAAGGCTAAAA+TGG | + | chr1.4:66228627-66228646 | MS.gene69905:intron | 45.0% | |
| GTACAGAAGAGGCAAACTAG+AGG | + | chr1.4:66229516-66229535 | MS.gene69905:CDS | 45.0% | |
| GTTAAATGCTGATACCTGCG+AGG | + | chr1.4:66227652-66227671 | MS.gene69905:CDS | 45.0% | |
| TCAGCATTTGCACCCTGTTA+TGG | - | chr1.4:66228185-66228204 | None:intergenic | 45.0% | |
| TCGACCTGGTCAAGAGAAAA+TGG | + | chr1.4:66230299-66230318 | MS.gene69905:CDS | 45.0% | |
| TGCTCATCACACGTGAGATT+AGG | - | chr1.4:66229978-66229997 | None:intergenic | 45.0% | |
| TTGTGCATGGAGGAAATGCA+TGG | - | chr1.4:66226577-66226596 | None:intergenic | 45.0% | |
| ! | AGAAAGGTTTTTCCAGCTCC+AGG | - | chr1.4:66228926-66228945 | None:intergenic | 45.0% |
| ! | CACAATCTCGTGTTGTTCAG+TGG | - | chr1.4:66229752-66229771 | None:intergenic | 45.0% |
| ! | CCAAAATCAATGGTTCTGCC+TGG | + | chr1.4:66229115-66229134 | MS.gene69905:CDS | 45.0% |
| ! | CTGATGATTTGGCTGGCATA+TGG | + | chr1.4:66227798-66227817 | MS.gene69905:CDS | 45.0% |
| ! | GAGCATGATTATGACGGAGA+AGG | + | chr1.4:66227332-66227351 | MS.gene69905:CDS | 45.0% |
| ! | GCGGTTGTTTAAGGAGCATA+TGG | + | chr1.4:66227523-66227542 | MS.gene69905:CDS | 45.0% |
| ! | GTTTGAAATCACGGTGGATC+TGG | - | chr1.4:66228485-66228504 | None:intergenic | 45.0% |
| ! | TTCTCAGCTTGCCATTTGGA+AGG | - | chr1.4:66230438-66230457 | None:intergenic | 45.0% |
| !! | AAAGCATTGAGGGAAAGTCC+TGG | + | chr1.4:66229295-66229314 | MS.gene69905:CDS | 45.0% |
| !! | CTTGTTGATGACTGGATCCA+TGG | + | chr1.4:66230335-66230354 | MS.gene69905:CDS | 45.0% |
| !! | GGAAGCACCTCATTTACTAG+AGG | + | chr1.4:66229540-66229559 | MS.gene69905:CDS | 45.0% |
| !! | GTCTTTGGAGCTAGGACTAA+TGG | - | chr1.4:66228998-66229017 | None:intergenic | 45.0% |
| !! | TTAGCCTTGTCACCTACCAT+TGG | - | chr1.4:66228625-66228644 | None:intergenic | 45.0% |
| !!! | CCAGGCAGAACCATTGATTT+TGG | - | chr1.4:66229118-66229137 | None:intergenic | 45.0% |
| !! | ATATATAAAAAAATTATCAA+TGG | + | chr1.4:66226112-66226131 | MS.gene69905:intron | 5.0% |
| ACAGGGTGCAAATGCTGATG+AGG | + | chr1.4:66228187-66228206 | MS.gene69905:intron | 50.0% | |
| ACTCAGGGAGATGGTTGAAG+AGG | + | chr1.4:66230473-66230492 | MS.gene69905:CDS | 50.0% | |
| AGATGACGCGGTAACAAACC+AGG | - | chr1.4:66227186-66227205 | None:intergenic | 50.0% | |
| ATATCTCATGCTCCTGGAGC+TGG | + | chr1.4:66228911-66228930 | MS.gene69905:CDS | 50.0% | |
| CAGAAGAGGCAAACTAGAGG+AGG | + | chr1.4:66229519-66229538 | MS.gene69905:CDS | 50.0% | |
| GTCTACGACGCTCAAAACGT+AGG | + | chr1.4:66227390-66227409 | MS.gene69905:CDS | 50.0% | |
| TGCTCCAGTTTCCTAAGACC+TGG | + | chr1.4:66226660-66226679 | MS.gene69905:CDS | 50.0% | |
| ! | ATGACGGAGAAGGTGCAATG+CGG | + | chr1.4:66227342-66227361 | MS.gene69905:CDS | 50.0% |
| !! | AAGAAAATGGCGGGCTGTAC+CGG | + | chr1.4:66229784-66229803 | MS.gene69905:CDS | 50.0% |
| !! | AGAGTGTGGTCTTTGGAGCT+AGG | - | chr1.4:66229006-66229025 | None:intergenic | 50.0% |
| !! | AGCATCGATTACTTCCTCGC+AGG | - | chr1.4:66227669-66227688 | None:intergenic | 50.0% |
| !! | AGCGCATGGCTAAAGCATTG+AGG | + | chr1.4:66229284-66229303 | MS.gene69905:CDS | 50.0% |
| !! | CTGTACCGGTTACTCTCTTG+AGG | + | chr1.4:66229798-66229817 | MS.gene69905:CDS | 50.0% |
| !! | GCGCATGGCTAAAGCATTGA+GGG | + | chr1.4:66229285-66229304 | MS.gene69905:CDS | 50.0% |
| !! | GTTGATGACTGGATCCATGG+AGG | + | chr1.4:66230338-66230357 | MS.gene69905:CDS | 50.0% |
| CACTCGGGTCAATACACCCA+TGG | + | chr1.4:66229836-66229855 | MS.gene69905:CDS | 55.0% | |
| CGTATCGGAAAGCGGTGATG+AGG | + | chr1.4:66227766-66227785 | MS.gene69905:CDS | 55.0% | |
| GAATGGCTCATGGGAACCTG+TGG | + | chr1.4:66226521-66226540 | MS.gene69905:CDS | 55.0% | |
| GCGCGTGCCTCTAGTAAATG+AGG | - | chr1.4:66229550-66229569 | None:intergenic | 55.0% | |
| GTCACAACCTTGCACCAGTG+AGG | + | chr1.4:66230019-66230038 | MS.gene69905:CDS | 55.0% | |
| ! | GTATCTGGCTTCGACAGCTG+TGG | - | chr1.4:66229084-66229103 | None:intergenic | 55.0% |
| ! | ATTGCGCGCGCTTTTCGACC+TGG | + | chr1.4:66230285-66230304 | MS.gene69905:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 66225975 | 66230551 | 66225975 | ID=MS.gene69905 |
| chr1.4 | mRNA | 66225975 | 66230551 | 66225975 | ID=MS.gene69905.t1;Parent=MS.gene69905 |
| chr1.4 | exon | 66225975 | 66226032 | 66225975 | ID=MS.gene69905.t1.exon1;Parent=MS.gene69905.t1 |
| chr1.4 | CDS | 66225975 | 66226032 | 66225975 | ID=cds.MS.gene69905.t1;Parent=MS.gene69905.t1 |
| chr1.4 | exon | 66226505 | 66226743 | 66226505 | ID=MS.gene69905.t1.exon2;Parent=MS.gene69905.t1 |
| chr1.4 | CDS | 66226505 | 66226743 | 66226505 | ID=cds.MS.gene69905.t1;Parent=MS.gene69905.t1 |
| chr1.4 | exon | 66226867 | 66227871 | 66226867 | ID=MS.gene69905.t1.exon3;Parent=MS.gene69905.t1 |
| chr1.4 | CDS | 66226867 | 66227871 | 66226867 | ID=cds.MS.gene69905.t1;Parent=MS.gene69905.t1 |
| chr1.4 | exon | 66228191 | 66228340 | 66228191 | ID=MS.gene69905.t1.exon4;Parent=MS.gene69905.t1 |
| chr1.4 | CDS | 66228191 | 66228340 | 66228191 | ID=cds.MS.gene69905.t1;Parent=MS.gene69905.t1 |
| chr1.4 | exon | 66228632 | 66230551 | 66228632 | ID=MS.gene69905.t1.exon5;Parent=MS.gene69905.t1 |
| chr1.4 | CDS | 66228632 | 66230551 | 66228632 | ID=cds.MS.gene69905.t1;Parent=MS.gene69905.t1 |
| Gene Sequence |
| Protein sequence |