AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene69917

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69917.t1 MTR_1g081560 92.042 377 28 2 1 377 1 375 0.0 635
MS.gene69917.t1 MTR_1g081580 32.544 338 170 10 82 373 45 370 9.11e-41 148
MS.gene69917.t1 MTR_7g114600 45.029 171 75 7 73 230 42 206 2.02e-28 115
MS.gene69917.t1 MTR_7g114600 38.793 116 48 5 278 374 323 434 3.24e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69917.t1 AT5G28040 34.877 367 153 16 78 374 72 422 1.37e-43 156
MS.gene69917.t1 AT5G28040 34.877 367 153 16 78 374 72 422 1.37e-43 156
MS.gene69917.t1 AT3G04930 30.105 382 174 11 78 374 78 451 6.63e-34 131
MS.gene69917.t1 AT3G04930 37.158 183 88 7 78 241 78 252 4.84e-26 108
MS.gene69917.t1 AT1G11510 36.364 132 68 4 109 230 105 230 2.15e-13 71.2
MS.gene69917.t1 AT1G11510 40.404 99 52 2 133 230 109 201 2.92e-13 70.5

Find 93 sgRNAs with CRISPR-Local

Find 103 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGAATTCCACGCTGAATT+TGG 0.140491 1.4:+66030513 None:intergenic
TGCTTTCACCATTGGTTTCT+TGG 0.172301 1.4:-66031038 MS.gene69917:CDS
TCGAAATTTCCCACAAGATT+TGG 0.203495 1.4:-66030378 MS.gene69917:CDS
CGAAATTTCCCACAAGATTT+GGG 0.213735 1.4:-66030377 MS.gene69917:CDS
CTTGTGGGAAATTTCGAAAA+TGG 0.256771 1.4:+66030384 None:intergenic
TCAATAAGATCAGGACTTTC+AGG 0.284560 1.4:+66030304 None:intergenic
ACCATTGTTGAAGGAACTAT+TGG 0.296222 1.4:-66030107 MS.gene69917:CDS
TGAACTGTTGAAGGGATATC+TGG 0.305389 1.4:-66030611 MS.gene69917:CDS
CTCAGCAATGCTTTCACCAT+TGG 0.330084 1.4:-66031046 None:intergenic
ATGGTTAAAACGGAGGATTT+TGG 0.338805 1.4:-66030014 MS.gene69917:CDS
TGACACCGACCATGACGTTT+TGG 0.344618 1.4:-66030350 MS.gene69917:CDS
AGAAGCTACGTAGGTTAAAA+AGG 0.350716 1.4:-66030474 MS.gene69917:CDS
ATTGTGAAGAAACAGATAAA+AGG 0.357039 1.4:-66030249 MS.gene69917:CDS
TGGTCTTCATCCACATTGTA+TGG 0.361996 1.4:+66030850 None:intergenic
GCCATGGCCACCGTCACAAC+GGG 0.369780 1.4:+66030784 None:intergenic
TTGAATTCCACGCTGAATTT+GGG 0.371612 1.4:+66030514 None:intergenic
GACGCACTGGGTGGCTCTAC+TGG 0.372415 1.4:+66030076 None:intergenic
CATTGTATGGACATAGAAAA+TGG 0.389529 1.4:+66030863 None:intergenic
TGGTGAGAAACAAGACTTCA+TGG 0.394662 1.4:+66030126 None:intergenic
GCCGTGTTTGTGTCATCTGC+AGG 0.398083 1.4:+66030757 None:intergenic
CATCATCCACATTGTCCATT+TGG 0.402335 1.4:+66030896 None:intergenic
TAGTAGCATTGCCATTGTTC+CGG 0.431642 1.4:+66030173 None:intergenic
TGAGGGATCTTGAAAGAAAT+CGG 0.433564 1.4:+66030415 None:intergenic
TTGTTTCTCACCATTGTTGA+AGG 0.439029 1.4:-66030116 MS.gene69917:CDS
TAACAACATCGGCGACGCAC+TGG 0.453222 1.4:+66030063 None:intergenic
AGATCAGGACTTTCAGGAAC+AGG 0.454735 1.4:+66030310 None:intergenic
CAATGGGAATGTTGTCCATT+TGG 0.457011 1.4:+66030830 None:intergenic
CCCCGTTGTGACGGTGGCCA+TGG 0.457760 1.4:-66030785 MS.gene69917:CDS
TCGCCGATGTTGTTATCGAC+AGG 0.458917 1.4:-66030055 MS.gene69917:CDS
TGACAATGTTGAAGACCAAA+TGG 0.469140 1.4:-66030911 MS.gene69917:CDS
TATTGACAATGTTAAGATGA+AGG 0.472539 1.4:-66030287 MS.gene69917:CDS
GTCATCTGCAGGGGCAGCCA+TGG 0.473001 1.4:+66030768 None:intergenic
TCAGAAACGGCAAGTGCAAT+GGG 0.486716 1.4:+66030814 None:intergenic
TTAAACAATATCAGAGGCTA+TGG 0.488222 1.4:-66030651 MS.gene69917:CDS
GGACGAGATTGAACTGTTGA+AGG 0.488252 1.4:-66030620 MS.gene69917:CDS
TTGTGAAGAAACAGATAAAA+GGG 0.492865 1.4:-66030248 MS.gene69917:CDS
AGTGGTAGTAGCCGCGGTGG+TGG 0.497730 1.4:+66030723 None:intergenic
AAGGAAACACAAGATGACTT+TGG 0.497734 1.4:-66030455 MS.gene69917:CDS
CAATGTGGATGAAGACCAAA+TGG 0.497943 1.4:-66030845 MS.gene69917:CDS
ATCAGAAACGGCAAGTGCAA+TGG 0.502613 1.4:+66030813 None:intergenic
TCAGATCAAGGCTAGGTTGG+AGG 0.516669 1.4:-66029951 MS.gene69917:CDS
TCGAAAATGGCTTGTTCCTG+AGG 0.518443 1.4:+66030397 None:intergenic
TTAACATTGTCAATAAGATC+AGG 0.519347 1.4:+66030295 None:intergenic
GGAGGTGTATTTGAATCGGT+TGG 0.520311 1.4:-66029987 MS.gene69917:CDS
GTCATTGCCCCAAATCTTGT+GGG 0.523632 1.4:+66030369 None:intergenic
AACTGGAGGTGTATTTGAAT+CGG 0.526700 1.4:-66029991 MS.gene69917:CDS
CGAAAATGGCTTGTTCCTGA+GGG 0.533678 1.4:+66030398 None:intergenic
CCGTGTTTGTGTCATCTGCA+GGG 0.538021 1.4:+66030758 None:intergenic
GATTTCTTTCAAGATCCCTC+AGG 0.542535 1.4:-66030413 MS.gene69917:CDS
TGTCATTGCCCCAAATCTTG+TGG 0.546121 1.4:+66030368 None:intergenic
AATCGGTTGGAGTTGTTGCA+AGG 0.547050 1.4:-66029974 MS.gene69917:CDS
AACAACATCGGCGACGCACT+GGG 0.551267 1.4:+66030064 None:intergenic
TCCAATAGTTCCTTCAACAA+TGG 0.555130 1.4:+66030106 None:intergenic
ATGGCAATGCTACTAGCATA+CGG 0.556871 1.4:-66030165 MS.gene69917:CDS
TGGCAATGCTACTAGCATAC+GGG 0.563532 1.4:-66030164 MS.gene69917:CDS
GGGATGAACAATGGTTAAAA+CGG 0.566430 1.4:-66030024 MS.gene69917:CDS
CGCCGATGTTGTTATCGACA+GGG 0.567511 1.4:-66030054 MS.gene69917:CDS
AGCCATGGCCACCGTCACAA+CGG 0.580091 1.4:+66030783 None:intergenic
CAATGTGGATGATGACGAAA+AGG 0.583654 1.4:-66030887 MS.gene69917:CDS
GACTTTGGACAAAGGCAAAG+AGG 0.584181 1.4:-66030440 MS.gene69917:CDS
GTTGTTGCAAGGTCAGATCA+AGG 0.586461 1.4:-66029963 MS.gene69917:CDS
GACAAAATCCAAGAAACCAA+TGG 0.589116 1.4:+66031030 None:intergenic
TCAGAGGCTATGGACAAAGC+AGG 0.591463 1.4:-66030641 MS.gene69917:CDS
TACGTAGCTTCTCAACAAGC+TGG 0.592388 1.4:+66030485 None:intergenic
GCAAATACTACTATTCAAAG+AGG 0.592599 1.4:-66030565 MS.gene69917:CDS
AGGTCAGATCAAGGCTAGGT+TGG 0.595411 1.4:-66029954 MS.gene69917:CDS
TGTTATCGACAGGGGAAGTG+AGG 0.599112 1.4:-66030045 MS.gene69917:CDS
TTCTTCTTCGGATGACGAAG+AGG 0.605501 1.4:+66030993 None:intergenic
GAAATTTCCCACAAGATTTG+GGG 0.610345 1.4:-66030376 MS.gene69917:CDS
GTTATCGACAGGGGAAGTGA+GGG 0.615083 1.4:-66030044 MS.gene69917:CDS
CTGGATTACATTAAACAGCA+AGG 0.616623 1.4:-66030592 MS.gene69917:CDS
GACGAGATTGAACTGTTGAA+GGG 0.620700 1.4:-66030619 MS.gene69917:CDS
CACAAGATGACTTTGGACAA+AGG 0.621465 1.4:-66030448 MS.gene69917:CDS
AACATCCAAAACGTCATGGT+CGG 0.630878 1.4:+66030345 None:intergenic
CGTGTTTGTGTCATCTGCAG+GGG 0.638603 1.4:+66030759 None:intergenic
CATCAACATCCAAAACGTCA+TGG 0.640991 1.4:+66030341 None:intergenic
CCCTGCAGATGACACAAACA+CGG 0.644402 1.4:-66030758 MS.gene69917:CDS
TGCAAGGTCAGATCAAGGCT+AGG 0.648837 1.4:-66029958 MS.gene69917:CDS
GGCAATGCTACTAGCATACG+GGG 0.651150 1.4:-66030163 MS.gene69917:CDS
TGTTATAGTGGTAGTAGCCG+CGG 0.655252 1.4:+66030717 None:intergenic
GCCGATGTTGTTATCGACAG+GGG 0.669203 1.4:-66030053 MS.gene69917:CDS
ATGAACAATGGTTAAAACGG+AGG 0.670080 1.4:-66030021 MS.gene69917:CDS
GGGAAGTGAGGGATGAACAA+TGG 0.671370 1.4:-66030033 MS.gene69917:CDS
CATGGCCACCGTCACAACGG+GGG 0.676320 1.4:+66030786 None:intergenic
CCATGGCCACCGTCACAACG+GGG 0.678792 1.4:+66030785 None:intergenic
ACGGTGTTAAACAATATCAG+AGG 0.680774 1.4:-66030657 MS.gene69917:CDS
TCCCCTGTCGATAACAACAT+CGG 0.682290 1.4:+66030052 None:intergenic
AGTTATTCCCAAATTCAGCG+TGG 0.688982 1.4:-66030521 MS.gene69917:CDS
TATAGTGGTAGTAGCCGCGG+TGG 0.689187 1.4:+66030720 None:intergenic
TGAAGACCAAATGGACAATG+TGG 0.693003 1.4:-66030902 MS.gene69917:CDS
AACATCGGCGACGCACTGGG+TGG 0.698538 1.4:+66030067 None:intergenic
AACAAACACAGCCACCACCG+CGG 0.714798 1.4:-66030734 MS.gene69917:CDS
AGCTTGTTGAGAAGCTACGT+AGG 0.743250 1.4:-66030483 MS.gene69917:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAACAAAAAGTATTCAGA+CGG - chr1.4:66030291-66030310 MS.gene69917:CDS 20.0%
! ATTGTGAAGAAACAGATAAA+AGG - chr1.4:66030718-66030737 MS.gene69917:CDS 25.0%
! TATTGACAATGTTAAGATGA+AGG - chr1.4:66030680-66030699 MS.gene69917:CDS 25.0%
! TTAACATTGTCAATAAGATC+AGG + chr1.4:66030675-66030694 None:intergenic 25.0%
! TTGTGAAGAAACAGATAAAA+GGG - chr1.4:66030719-66030738 MS.gene69917:CDS 25.0%
CATTGTATGGACATAGAAAA+TGG + chr1.4:66030107-66030126 None:intergenic 30.0%
GCAAATACTACTATTCAAAG+AGG - chr1.4:66030402-66030421 MS.gene69917:CDS 30.0%
TTAAACAATATCAGAGGCTA+TGG - chr1.4:66030316-66030335 MS.gene69917:CDS 30.0%
TTCTTCTTCTTCTTCTTCTT+CGG + chr1.4:66029989-66030008 None:intergenic 30.0%
! TTTTCTATGTCCATACAATG+TGG - chr1.4:66030107-66030126 MS.gene69917:CDS 30.0%
AAGGAAACACAAGATGACTT+TGG - chr1.4:66030512-66030531 MS.gene69917:CDS 35.0%
ACAAAAAATGACCGGAACAA+TGG - chr1.4:66030783-66030802 MS.gene69917:CDS 35.0%
ACCATTGTTGAAGGAACTAT+TGG - chr1.4:66030860-66030879 MS.gene69917:CDS 35.0%
ACGTGAACACAAAAAATGAC+CGG - chr1.4:66030775-66030794 MS.gene69917:CDS 35.0%
AGAAGCTACGTAGGTTAAAA+AGG - chr1.4:66030493-66030512 MS.gene69917:CDS 35.0%
ATGAACAATGGTTAAAACGG+AGG - chr1.4:66030946-66030965 MS.gene69917:CDS 35.0%
ATTGAATTCCACGCTGAATT+TGG + chr1.4:66030457-66030476 None:intergenic 35.0%
CGAAATTTCCCACAAGATTT+GGG - chr1.4:66030590-66030609 MS.gene69917:CDS 35.0%
CTGGATTACATTAAACAGCA+AGG - chr1.4:66030375-66030394 MS.gene69917:CDS 35.0%
CTTGTGGGAAATTTCGAAAA+TGG + chr1.4:66030586-66030605 None:intergenic 35.0%
GAAATTTCCCACAAGATTTG+GGG - chr1.4:66030591-66030610 MS.gene69917:CDS 35.0%
GACAAAATCCAAGAAACCAA+TGG + chr1.4:66029940-66029959 None:intergenic 35.0%
GGGATGAACAATGGTTAAAA+CGG - chr1.4:66030943-66030962 MS.gene69917:CDS 35.0%
TCAATAAGATCAGGACTTTC+AGG + chr1.4:66030666-66030685 None:intergenic 35.0%
TCCAATAGTTCCTTCAACAA+TGG + chr1.4:66030864-66030883 None:intergenic 35.0%
TCGAAATTTCCCACAAGATT+TGG - chr1.4:66030589-66030608 MS.gene69917:CDS 35.0%
TGACAATGTTGAAGACCAAA+TGG - chr1.4:66030056-66030075 MS.gene69917:CDS 35.0%
TGAGGGATCTTGAAAGAAAT+CGG + chr1.4:66030555-66030574 None:intergenic 35.0%
TTGAATTCCACGCTGAATTT+GGG + chr1.4:66030456-66030475 None:intergenic 35.0%
! AACTGGAGGTGTATTTGAAT+CGG - chr1.4:66030976-66030995 MS.gene69917:CDS 35.0%
! ACGGTGTTAAACAATATCAG+AGG - chr1.4:66030310-66030329 MS.gene69917:CDS 35.0%
! ATGGTTAAAACGGAGGATTT+TGG - chr1.4:66030953-66030972 MS.gene69917:CDS 35.0%
! TTGTTTCTCACCATTGTTGA+AGG - chr1.4:66030851-66030870 MS.gene69917:CDS 35.0%
!! TTTTGAGCGTGTTGTTATAG+TGG + chr1.4:66030265-66030284 None:intergenic 35.0%
AACATCCAAAACGTCATGGT+CGG + chr1.4:66030625-66030644 None:intergenic 40.0%
AGTTATTCCCAAATTCAGCG+TGG - chr1.4:66030446-66030465 MS.gene69917:CDS 40.0%
ATGGCAATGCTACTAGCATA+CGG - chr1.4:66030802-66030821 MS.gene69917:CDS 40.0%
CAATGGGAATGTTGTCCATT+TGG + chr1.4:66030140-66030159 None:intergenic 40.0%
CAATGTGGATGAAGACCAAA+TGG - chr1.4:66030122-66030141 MS.gene69917:CDS 40.0%
CACAAGATGACTTTGGACAA+AGG - chr1.4:66030519-66030538 MS.gene69917:CDS 40.0%
CATCAACATCCAAAACGTCA+TGG + chr1.4:66030629-66030648 None:intergenic 40.0%
CATCATCCACATTGTCCATT+TGG + chr1.4:66030074-66030093 None:intergenic 40.0%
GACGAGATTGAACTGTTGAA+GGG - chr1.4:66030348-66030367 MS.gene69917:CDS 40.0%
GATTTCTTTCAAGATCCCTC+AGG - chr1.4:66030554-66030573 MS.gene69917:CDS 40.0%
TAGTAGCATTGCCATTGTTC+CGG + chr1.4:66030797-66030816 None:intergenic 40.0%
TGAACTGTTGAAGGGATATC+TGG - chr1.4:66030356-66030375 MS.gene69917:CDS 40.0%
TGAAGACCAAATGGACAATG+TGG - chr1.4:66030065-66030084 MS.gene69917:CDS 40.0%
TGGTCTTCATCCACATTGTA+TGG + chr1.4:66030120-66030139 None:intergenic 40.0%
TGGTGAGAAACAAGACTTCA+TGG + chr1.4:66030844-66030863 None:intergenic 40.0%
! CAATGTGGATGATGACGAAA+AGG - chr1.4:66030080-66030099 MS.gene69917:CDS 40.0%
!! TGCTTTCACCATTGGTTTCT+TGG - chr1.4:66029929-66029948 MS.gene69917:CDS 40.0%
!!! AAAACGGAGGATTTTGGAAC+TGG - chr1.4:66030959-66030978 MS.gene69917:CDS 40.0%
AATCGGTTGGAGTTGTTGCA+AGG - chr1.4:66030993-66031012 MS.gene69917:CDS 45.0%
AGATCAGGACTTTCAGGAAC+AGG + chr1.4:66030660-66030679 None:intergenic 45.0%
ATCAGAAACGGCAAGTGCAA+TGG + chr1.4:66030157-66030176 None:intergenic 45.0%
GACTTTGGACAAAGGCAAAG+AGG - chr1.4:66030527-66030546 MS.gene69917:CDS 45.0%
GGACGAGATTGAACTGTTGA+AGG - chr1.4:66030347-66030366 MS.gene69917:CDS 45.0%
GTCATTGCCCCAAATCTTGT+GGG + chr1.4:66030601-66030620 None:intergenic 45.0%
GTTGTTGCAAGGTCAGATCA+AGG - chr1.4:66031004-66031023 MS.gene69917:CDS 45.0%
TACGTAGCTTCTCAACAAGC+TGG + chr1.4:66030485-66030504 None:intergenic 45.0%
TCAGAAACGGCAAGTGCAAT+GGG + chr1.4:66030156-66030175 None:intergenic 45.0%
TCCCCTGTCGATAACAACAT+CGG + chr1.4:66030918-66030937 None:intergenic 45.0%
TGGCAATGCTACTAGCATAC+GGG - chr1.4:66030803-66030822 MS.gene69917:CDS 45.0%
TGTCATTGCCCCAAATCTTG+TGG + chr1.4:66030602-66030621 None:intergenic 45.0%
TGTTATAGTGGTAGTAGCCG+CGG + chr1.4:66030253-66030272 None:intergenic 45.0%
TTCTTCTTCGGATGACGAAG+AGG + chr1.4:66029977-66029996 None:intergenic 45.0%
! GGAGGTGTATTTGAATCGGT+TGG - chr1.4:66030980-66030999 MS.gene69917:CDS 45.0%
!! AGCTTGTTGAGAAGCTACGT+AGG - chr1.4:66030484-66030503 MS.gene69917:CDS 45.0%
!! CGAAAATGGCTTGTTCCTGA+GGG + chr1.4:66030572-66030591 None:intergenic 45.0%
!! TCGAAAATGGCTTGTTCCTG+AGG + chr1.4:66030573-66030592 None:intergenic 45.0%
AACGGGGGATGCATCAGAAA+CGG + chr1.4:66030169-66030188 None:intergenic 50.0%
AGGTCAGATCAAGGCTAGGT+TGG - chr1.4:66031013-66031032 MS.gene69917:CDS 50.0%
CCCTGCAGATGACACAAACA+CGG - chr1.4:66030209-66030228 MS.gene69917:CDS 50.0%
CCGTGTTTGTGTCATCTGCA+GGG + chr1.4:66030212-66030231 None:intergenic 50.0%
CGCCGATGTTGTTATCGACA+GGG - chr1.4:66030913-66030932 MS.gene69917:CDS 50.0%
CGTGTTTGTGTCATCTGCAG+GGG + chr1.4:66030211-66030230 None:intergenic 50.0%
GCCGATGTTGTTATCGACAG+GGG - chr1.4:66030914-66030933 MS.gene69917:CDS 50.0%
GGCAATGCTACTAGCATACG+GGG - chr1.4:66030804-66030823 MS.gene69917:CDS 50.0%
GGGAAGTGAGGGATGAACAA+TGG - chr1.4:66030934-66030953 MS.gene69917:CDS 50.0%
GTTATCGACAGGGGAAGTGA+GGG - chr1.4:66030923-66030942 MS.gene69917:CDS 50.0%
TCAGAGGCTATGGACAAAGC+AGG - chr1.4:66030326-66030345 MS.gene69917:CDS 50.0%
TCGCCGATGTTGTTATCGAC+AGG - chr1.4:66030912-66030931 MS.gene69917:CDS 50.0%
TGCAAGGTCAGATCAAGGCT+AGG - chr1.4:66031009-66031028 MS.gene69917:CDS 50.0%
TGTTATCGACAGGGGAAGTG+AGG - chr1.4:66030922-66030941 MS.gene69917:CDS 50.0%
! TCAGATCAAGGCTAGGTTGG+AGG - chr1.4:66031016-66031035 MS.gene69917:CDS 50.0%
! TGACACCGACCATGACGTTT+TGG - chr1.4:66030617-66030636 MS.gene69917:CDS 50.0%
!!! ACGGAGGATTTTGGAACTGG+AGG - chr1.4:66030962-66030981 MS.gene69917:CDS 50.0%
AACAAACACAGCCACCACCG+CGG - chr1.4:66030233-66030252 MS.gene69917:CDS 55.0%
AACAACATCGGCGACGCACT+GGG + chr1.4:66030906-66030925 None:intergenic 55.0%
GCCGTGTTTGTGTCATCTGC+AGG + chr1.4:66030213-66030232 None:intergenic 55.0%
TAACAACATCGGCGACGCAC+TGG + chr1.4:66030907-66030926 None:intergenic 55.0%
TATAGTGGTAGTAGCCGCGG+TGG + chr1.4:66030250-66030269 None:intergenic 55.0%
TGATGCATCCCCCGTTGTGA+CGG - chr1.4:66030173-66030192 MS.gene69917:CDS 55.0%
AGCCATGGCCACCGTCACAA+CGG + chr1.4:66030187-66030206 None:intergenic 60.0%
AACATCGGCGACGCACTGGG+TGG + chr1.4:66030903-66030922 None:intergenic 65.0%
AGTGGTAGTAGCCGCGGTGG+TGG + chr1.4:66030247-66030266 None:intergenic 65.0%
CATGGCCACCGTCACAACGG+GGG + chr1.4:66030184-66030203 None:intergenic 65.0%
CCATGGCCACCGTCACAACG+GGG + chr1.4:66030185-66030204 None:intergenic 65.0%
GCCATGGCCACCGTCACAAC+GGG + chr1.4:66030186-66030205 None:intergenic 65.0%
GTCATCTGCAGGGGCAGCCA+TGG + chr1.4:66030202-66030221 None:intergenic 65.0%
TGCATCCCCCGTTGTGACGG+TGG - chr1.4:66030176-66030195 MS.gene69917:CDS 65.0%
! GACGCACTGGGTGGCTCTAC+TGG + chr1.4:66030894-66030913 None:intergenic 65.0%
CCCCGTTGTGACGGTGGCCA+TGG - chr1.4:66030182-66030201 MS.gene69917:CDS 70.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 66029928 66031061 66029928 ID=MS.gene69917
chr1.4 mRNA 66029928 66031061 66029928 ID=MS.gene69917.t1;Parent=MS.gene69917
chr1.4 exon 66029928 66031061 66029928 ID=MS.gene69917.t1.exon1;Parent=MS.gene69917.t1
chr1.4 CDS 66029928 66031061 66029928 ID=cds.MS.gene69917.t1;Parent=MS.gene69917.t1
Gene Sequence

>MS.gene69917

ATGCTTTCACCATTGGTTTCTTGGATTTTGTCAACATCATCATCTTCCTCTTCGTCATCCGAAGAAGAAGAAGAAGAAGAAAGTCTTGACATTAACAATGACGAAGCAGACTGTGAAAACTTTGAAAATGACAATGTTGAAGACCAAATGGACAATGTGGATGATGACGAAAAGGACCATTTTCTATGTCCATACAATGTGGATGAAGACCAAATGGACAACATTCCCATTGCACTTGCCGTTTCTGATGCATCCCCCGTTGTGACGGTGGCCATGGCTGCCCCTGCAGATGACACAAACACGGCAACAAACACAGCCACCACCGCGGCTACTACCACTATAACAACACGCTCAAAACGACAATATAACAAAAAGTATTCAGACGGTGTTAAACAATATCAGAGGCTATGGACAAAGCAGGACGAGATTGAACTGTTGAAGGGATATCTGGATTACATTAAACAGCAAGGAAGAGCAAATACTACTATTCAAAGAGGCGTAGCTTCATTCTATGATCAAGTTATTCCCAAATTCAGCGTGGAATTCAATAAGAACCAGCTTGTTGAGAAGCTACGTAGGTTAAAAAGGAAACACAAGATGACTTTGGACAAAGGCAAAGAGGTTCCGATTTCTTTCAAGATCCCTCAGGAACAAGCCATTTTCGAAATTTCCCACAAGATTTGGGGCAATGACACCGACCATGACGTTTTGGATGTTGATGAATCAAGACCTGTTCCTGAAAGTCCTGATCTTATTGACAATGTTAAGATGAAGGATGAAGATGTTGACAATTGTGAAGAAACAGATAAAAGGGTGCACAAGCGTGTGAAGATAACAACAGATGACGACGTGAACACAAAAAATGACCGGAACAATGGCAATGCTACTAGCATACGGGGCTTCATTGAAGAAACCATGAAGTCTTGTTTCTCACCATTGTTGAAGGAACTATTGGATGATGTTCCAGTAGAGCCACCCAGTGCGTCGCCGATGTTGTTATCGACAGGGGAAGTGAGGGATGAACAATGGTTAAAACGGAGGATTTTGGAACTGGAGGTGTATTTGAATCGGTTGGAGTTGTTGCAAGGTCAGATCAAGGCTAGGTTGGAGGAGTTAAAGTCTAGCTTAGATTGA
Protein sequence

>MS.gene69917.t1

MLSPLVSWILSTSSSSSSSSEEEEEEESLDINNDEADCENFENDNVEDQMDNVDDDEKDHFLCPYNVDEDQMDNIPIALAVSDASPVVTVAMAAPADDTNTATNTATTAATTTITTRSKRQYNKKYSDGVKQYQRLWTKQDEIELLKGYLDYIKQQGRANTTIQRGVASFYDQVIPKFSVEFNKNQLVEKLRRLKRKHKMTLDKGKEVPISFKIPQEQAIFEISHKIWGNDTDHDVLDVDESRPVPESPDLIDNVKMKDEDVDNCEETDKRVHKRVKITTDDDVNTKNDRNNGNATSIRGFIEETMKSCFSPLLKELLDDVPVEPPSASPMLLSTGEVRDEQWLKRRILELEVYLNRLELLQGQIKARLEELKSSLD