Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69983.t1 | XP_003629092.1 | 92.9 | 170 | 12 | 0 | 1 | 170 | 1 | 170 | 2.60E-85 | 325.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69983.t1 | Q8S9H7 | 52.1 | 48 | 23 | 0 | 103 | 150 | 132 | 179 | 9.8e-09 | 62.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69983.t1 | G7L8N4 | 92.9 | 170 | 12 | 0 | 1 | 170 | 1 | 170 | 1.9e-85 | 325.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene69983.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69983.t1 | MTR_8g073050 | 90.625 | 224 | 20 | 1 | 1 | 224 | 1 | 223 | 1.76e-128 | 362 |
| MS.gene69983.t1 | MTR_6g043480 | 59.052 | 232 | 84 | 6 | 1 | 224 | 1 | 229 | 1.61e-72 | 220 |
| MS.gene69983.t1 | MTR_6g043490 | 60.086 | 233 | 80 | 6 | 1 | 224 | 1 | 229 | 1.31e-70 | 215 |
| MS.gene69983.t1 | MTR_8g072990 | 53.785 | 251 | 81 | 8 | 1 | 225 | 1 | 242 | 6.54e-65 | 201 |
| MS.gene69983.t1 | MTR_5g027570 | 40.580 | 69 | 41 | 0 | 98 | 166 | 87 | 155 | 5.11e-14 | 68.9 |
| MS.gene69983.t1 | MTR_8g063870 | 31.387 | 137 | 77 | 3 | 87 | 212 | 65 | 195 | 1.76e-12 | 65.5 |
| MS.gene69983.t1 | MTR_2g100930 | 37.895 | 95 | 49 | 2 | 56 | 150 | 72 | 156 | 2.17e-12 | 65.9 |
| MS.gene69983.t1 | MTR_6g092540 | 32.787 | 122 | 64 | 2 | 103 | 224 | 97 | 200 | 2.61e-12 | 65.1 |
| MS.gene69983.t1 | MTR_1g048660 | 41.333 | 75 | 40 | 1 | 104 | 174 | 13 | 87 | 4.09e-12 | 60.8 |
| MS.gene69983.t1 | MTR_4g111975 | 47.170 | 53 | 28 | 0 | 100 | 152 | 135 | 187 | 6.35e-12 | 63.9 |
| MS.gene69983.t1 | MTR_7g067080 | 28.244 | 131 | 82 | 4 | 28 | 150 | 61 | 187 | 6.59e-12 | 63.9 |
| MS.gene69983.t1 | MTR_8g101650 | 49.020 | 51 | 26 | 0 | 103 | 153 | 105 | 155 | 1.25e-11 | 63.2 |
| MS.gene69983.t1 | MTR_5g069710 | 33.333 | 102 | 51 | 2 | 57 | 150 | 87 | 179 | 1.37e-11 | 63.2 |
| MS.gene69983.t1 | MTR_5g081860 | 50.000 | 48 | 24 | 0 | 103 | 150 | 125 | 172 | 1.57e-11 | 62.8 |
| MS.gene69983.t1 | MTR_3g462790 | 50.000 | 48 | 24 | 0 | 103 | 150 | 147 | 194 | 1.60e-11 | 63.2 |
| MS.gene69983.t1 | MTR_4g100630 | 44.262 | 61 | 34 | 0 | 90 | 150 | 82 | 142 | 1.78e-11 | 62.8 |
| MS.gene69983.t1 | MTR_5g037080 | 47.917 | 48 | 25 | 0 | 103 | 150 | 102 | 149 | 4.88e-11 | 61.6 |
| MS.gene69983.t1 | MTR_4g107230 | 34.211 | 76 | 50 | 0 | 74 | 149 | 55 | 130 | 5.10e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69983.t1 | AT3G16350 | 49.153 | 59 | 29 | 1 | 93 | 150 | 126 | 184 | 2.51e-12 | 65.9 |
| MS.gene69983.t1 | AT5G05790 | 47.273 | 55 | 29 | 0 | 95 | 149 | 123 | 177 | 3.44e-12 | 64.7 |
| MS.gene69983.t1 | AT5G05790 | 47.273 | 55 | 29 | 0 | 95 | 149 | 123 | 177 | 3.44e-12 | 64.7 |
| MS.gene69983.t1 | AT5G58900 | 52.083 | 48 | 23 | 0 | 103 | 150 | 141 | 188 | 4.63e-12 | 64.3 |
| MS.gene69983.t1 | AT1G49010 | 47.170 | 53 | 28 | 0 | 100 | 152 | 131 | 183 | 6.18e-12 | 64.3 |
| MS.gene69983.t1 | AT2G38090 | 52.083 | 48 | 23 | 0 | 103 | 150 | 141 | 188 | 8.53e-12 | 63.5 |
| MS.gene69983.t1 | AT5G08520 | 45.283 | 53 | 29 | 0 | 100 | 152 | 115 | 167 | 1.83e-11 | 62.8 |
| MS.gene69983.t1 | AT1G19000 | 49.091 | 55 | 27 | 1 | 96 | 149 | 94 | 148 | 1.95e-11 | 62.8 |
| MS.gene69983.t1 | AT1G19000 | 49.091 | 55 | 27 | 1 | 96 | 149 | 94 | 148 | 1.95e-11 | 62.8 |
| MS.gene69983.t1 | AT5G61620 | 36.538 | 104 | 47 | 2 | 104 | 207 | 109 | 193 | 2.63e-11 | 62.4 |
| MS.gene69983.t1 | AT3G11280 | 51.064 | 47 | 23 | 0 | 103 | 149 | 127 | 173 | 2.87e-11 | 62.0 |
| MS.gene69983.t1 | AT3G11280 | 51.064 | 47 | 23 | 0 | 103 | 149 | 127 | 173 | 2.87e-11 | 62.0 |
| MS.gene69983.t1 | AT5G01200 | 43.077 | 65 | 30 | 1 | 86 | 150 | 136 | 193 | 3.24e-11 | 61.6 |
| MS.gene69983.t1 | AT5G56840 | 41.270 | 63 | 37 | 0 | 103 | 165 | 91 | 153 | 8.77e-11 | 60.1 |
Find 72 sgRNAs with CRISPR-Local
Find 89 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATCATCTGCTCCATATTA+TGG | 0.239375 | 8.1:+32666345 | MS.gene69983:CDS |
| GTTTAAGAACCGTTGCAATT+TGG | 0.286710 | 8.1:-32665474 | None:intergenic |
| TAGAAACGGGAGCAAAATTA+AGG | 0.295978 | 8.1:-32665324 | None:intergenic |
| CTGCTAGCTTCTCCATAATA+TGG | 0.297489 | 8.1:-32666357 | None:intergenic |
| TTTGAGAATTGGGATGTCTT+TGG | 0.303715 | 8.1:-32665508 | None:intergenic |
| GGTGTTGGAGGTGATGGATT+TGG | 0.307879 | 8.1:-32665366 | None:intergenic |
| AATTGGGATGTCTTTGGTTC+AGG | 0.316369 | 8.1:-32665502 | None:intergenic |
| GCCGAGCTCCATTTGAGAAT+TGG | 0.325628 | 8.1:-32665519 | None:intergenic |
| AGTTGATTTGGAGCTTCGTT+TGG | 0.335545 | 8.1:+32666452 | MS.gene69983:CDS |
| GGTGTTGATGGCGGTGAGTC+AGG | 0.341872 | 8.1:-32665274 | None:intergenic |
| TCTCAAATGGAGCTCGGCTC+AGG | 0.344453 | 8.1:+32665524 | MS.gene69983:CDS |
| CTGATGGGGCTGATTGAGTA+TGG | 0.344517 | 8.1:+32666147 | MS.gene69983:CDS |
| CCGAGCTCCATTTGAGAATT+GGG | 0.377504 | 8.1:-32665518 | None:intergenic |
| TGGATTTGGTGGTGAAGATT+AGG | 0.385439 | 8.1:-32665352 | None:intergenic |
| TGATGAGTTCCTGTTTCTCT+TGG | 0.391375 | 8.1:-32666328 | None:intergenic |
| CTCTTGGAAGCAGAGTTGTT+GGG | 0.392834 | 8.1:-32666312 | None:intergenic |
| GGCCAACCGGTAGCGATTTG+AGG | 0.396177 | 8.1:-32665430 | None:intergenic |
| GGATTTGGTGGTGAAGATTA+GGG | 0.406181 | 8.1:-32665351 | None:intergenic |
| TCTCTTGGAAGCAGAGTTGT+TGG | 0.416850 | 8.1:-32666313 | None:intergenic |
| GTAAGATCAATGATCTCAAT+AGG | 0.418602 | 8.1:-32665244 | None:intergenic |
| ACTCTGCTTCCAAGAGAAAC+AGG | 0.420387 | 8.1:+32666319 | MS.gene69983:CDS |
| GCCAACCGGTAGCGATTTGA+GGG | 0.420964 | 8.1:-32665429 | None:intergenic |
| TAGTTTGGTGTTGGAGGTGA+TGG | 0.426613 | 8.1:-32665372 | None:intergenic |
| GTTGATTTGGAGCTTCGTTT+GGG | 0.430693 | 8.1:+32666453 | MS.gene69983:CDS |
| GTGGTACAAACAAGGTAGTT+TGG | 0.433356 | 8.1:-32665387 | None:intergenic |
| GGAGCAAAATTAAGGATTGT+TGG | 0.439969 | 8.1:-32665316 | None:intergenic |
| GCTGTGATACATGTCAGGTT+GGG | 0.447382 | 8.1:-32665452 | None:intergenic |
| GATAAAGATACAGGTGTTGA+TGG | 0.448047 | 8.1:-32665286 | None:intergenic |
| AAGATTAGGGTTGGTAGAAA+CGG | 0.455787 | 8.1:-32665338 | None:intergenic |
| GTCTCAAATCCTGGAGGTGG+TGG | 0.457263 | 8.1:-32665406 | None:intergenic |
| GGGCTGATTGAGTATGGAAA+AGG | 0.458465 | 8.1:+32666153 | MS.gene69983:CDS |
| GAGCTCGGCTCAGGGTTCCT+TGG | 0.459714 | 8.1:+32665533 | MS.gene69983:CDS |
| CATGTCAGGTTGGGGCCAAC+CGG | 0.463630 | 8.1:-32665443 | None:intergenic |
| GATGTCTTTGGTTCAGGTAA+CGG | 0.466372 | 8.1:-32665496 | None:intergenic |
| GTTGGAGGTGATGGATTTGG+TGG | 0.478359 | 8.1:-32665363 | None:intergenic |
| ATTTGAGGGGTCTCAAATCC+TGG | 0.485120 | 8.1:-32665415 | None:intergenic |
| TTGAGTATGGAAAAGGGAAA+TGG | 0.487269 | 8.1:+32666160 | MS.gene69983:CDS |
| GGCTGTGATACATGTCAGGT+TGG | 0.490510 | 8.1:-32665453 | None:intergenic |
| AGTGCTTGCTTCATAGTTGT+TGG | 0.490843 | 8.1:-32666391 | None:intergenic |
| AGATTAGGGTTGGTAGAAAC+GGG | 0.494754 | 8.1:-32665337 | None:intergenic |
| ACAAGGTAGTTTGGTGTTGG+AGG | 0.496753 | 8.1:-32665378 | None:intergenic |
| CCTAGTGCTTCTGCTGGTGA+TGG | 0.499343 | 8.1:+32666426 | MS.gene69983:CDS |
| CCACAACAAGTTAAAAGCTA+TGG | 0.499837 | 8.1:+32666219 | MS.gene69983:CDS |
| TGGTGATGGAGAAGTTGATT+TGG | 0.503382 | 8.1:+32666440 | MS.gene69983:CDS |
| AAGACATCCCAATTCTCAAA+TGG | 0.506263 | 8.1:+32665511 | MS.gene69983:CDS |
| GGTACATTAGATAAAGATAC+AGG | 0.517255 | 8.1:-32665295 | None:intergenic |
| CAAACAAGGTAGTTTGGTGT+TGG | 0.522907 | 8.1:-32665381 | None:intergenic |
| GGGGTCTCAAATCCTGGAGG+TGG | 0.526295 | 8.1:-32665409 | None:intergenic |
| CTCAAATGGAGCTCGGCTCA+GGG | 0.530252 | 8.1:+32665525 | MS.gene69983:CDS |
| CCCAATTCTCAAATGGAGCT+CGG | 0.531404 | 8.1:+32665518 | MS.gene69983:CDS |
| AGAAGCACTAGGCGGAGTCA+TGG | 0.531695 | 8.1:-32666415 | None:intergenic |
| ATTTGGCTGTGATACATGTC+AGG | 0.537702 | 8.1:-32665457 | None:intergenic |
| GAGACCCCTCAAATCGCTAC+CGG | 0.540565 | 8.1:+32665424 | MS.gene69983:CDS |
| TTGTTTGTACCACCACCTCC+AGG | 0.546643 | 8.1:+32665397 | MS.gene69983:CDS |
| GGCTGATTGAGTATGGAAAA+GGG | 0.548425 | 8.1:+32666154 | MS.gene69983:CDS |
| ACTCCGCCTAGTGCTTCTGC+TGG | 0.556890 | 8.1:+32666420 | MS.gene69983:CDS |
| CCATCACCAGCAGAAGCACT+AGG | 0.558115 | 8.1:-32666426 | None:intergenic |
| AAACCATGCACAAATGTGGC+TGG | 0.559050 | 8.1:-32666264 | None:intergenic |
| CTGTGATACATGTCAGGTTG+GGG | 0.560230 | 8.1:-32665451 | None:intergenic |
| GTGTTGATGGCGGTGAGTCA+GGG | 0.562040 | 8.1:-32665273 | None:intergenic |
| CCTAAAACCATGCACAAATG+TGG | 0.569308 | 8.1:-32666268 | None:intergenic |
| CTACCAGCCACATTTGTGCA+TGG | 0.576832 | 8.1:+32666261 | MS.gene69983:CDS |
| TTGGTGGTGAAGATTAGGGT+TGG | 0.582165 | 8.1:-32665347 | None:intergenic |
| CCCCTCAAATCGCTACCGGT+TGG | 0.595096 | 8.1:+32665428 | MS.gene69983:CDS |
| TCATGCTCTAATTGACTCCA+AGG | 0.607425 | 8.1:-32665550 | None:intergenic |
| TGGAGGTGGTGGTACAAACA+AGG | 0.619969 | 8.1:-32665395 | None:intergenic |
| CATGCACAAATGTGGCTGGT+AGG | 0.633937 | 8.1:-32666260 | None:intergenic |
| AAAGATACAGGTGTTGATGG+CGG | 0.678925 | 8.1:-32665283 | None:intergenic |
| GTATCACAGCCAAATTGCAA+CGG | 0.684681 | 8.1:+32665465 | MS.gene69983:CDS |
| CCAACCGGTAGCGATTTGAG+GGG | 0.703939 | 8.1:-32665428 | None:intergenic |
| TGAGGGGTCTCAAATCCTGG+AGG | 0.731817 | 8.1:-32665412 | None:intergenic |
| TCACCAGCAGAAGCACTAGG+CGG | 0.753286 | 8.1:-32666423 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATTAGTCATTAAATT+CGG | - | chr8.1:32665917-32665936 | None:intergenic | 10.0% |
| !! | ATATCAATAGTAAAATTTAA+CGG | - | chr8.1:32666063-32666082 | None:intergenic | 10.0% |
| !! | TATCAATAGTAAAATTTAAC+GGG | - | chr8.1:32666062-32666081 | None:intergenic | 15.0% |
| !! | AAATTGCGATAAAAATTTAG+AGG | + | chr8.1:32665648-32665667 | MS.gene69983:intron | 20.0% |
| !! | ATAATCTATGAAAGAGTAAT+TGG | - | chr8.1:32666006-32666025 | None:intergenic | 20.0% |
| !! | TGTCAAAAAAATAATAGCTA+CGG | - | chr8.1:32665718-32665737 | None:intergenic | 20.0% |
| !!! | TATTTTAGCTTATTTCTGAT+GGG | + | chr8.1:32666132-32666151 | MS.gene69983:intron | 20.0% |
| !!! | TTATTTTAGCTTATTTCTGA+TGG | + | chr8.1:32666131-32666150 | MS.gene69983:intron | 20.0% |
| ! | AGAAAAAGTTGAAATAACTG+CGG | - | chr8.1:32665776-32665795 | None:intergenic | 25.0% |
| ! | TTGAAATAGCCACAAATATT+TGG | + | chr8.1:32665836-32665855 | MS.gene69983:intron | 25.0% |
| ! | TTTCTTTCTCCAAATATTTG+TGG | - | chr8.1:32665848-32665867 | None:intergenic | 25.0% |
| !!! | ATTTTAGCTTATTTCTGATG+GGG | + | chr8.1:32666133-32666152 | MS.gene69983:intron | 25.0% |
| AAATAACTGCGGATTTAATG+AGG | - | chr8.1:32665765-32665784 | None:intergenic | 30.0% | |
| GGTACATTAGATAAAGATAC+AGG | - | chr8.1:32665298-32665317 | None:intergenic | 30.0% | |
| GTAAGATCAATGATCTCAAT+AGG | - | chr8.1:32665247-32665266 | None:intergenic | 30.0% | |
| AAGACATCCCAATTCTCAAA+TGG | + | chr8.1:32665511-32665530 | MS.gene69983:CDS | 35.0% | |
| CCACAACAAGTTAAAAGCTA+TGG | + | chr8.1:32666219-32666238 | MS.gene69983:CDS | 35.0% | |
| GGAGCAAAATTAAGGATTGT+TGG | - | chr8.1:32665319-32665338 | None:intergenic | 35.0% | |
| GTTTAAGAACCGTTGCAATT+TGG | - | chr8.1:32665477-32665496 | None:intergenic | 35.0% | |
| TAGAAACGGGAGCAAAATTA+AGG | - | chr8.1:32665327-32665346 | None:intergenic | 35.0% | |
| TCATCATCTGCTCCATATTA+TGG | + | chr8.1:32666345-32666364 | MS.gene69983:CDS | 35.0% | |
| TTGAGTATGGAAAAGGGAAA+TGG | + | chr8.1:32666160-32666179 | MS.gene69983:CDS | 35.0% | |
| TTTGAGAATTGGGATGTCTT+TGG | - | chr8.1:32665511-32665530 | None:intergenic | 35.0% | |
| !! | AAGATTAGGGTTGGTAGAAA+CGG | - | chr8.1:32665341-32665360 | None:intergenic | 35.0% |
| !! | GATAAAGATACAGGTGTTGA+TGG | - | chr8.1:32665289-32665308 | None:intergenic | 35.0% |
| !!! | CCATAGCTTTTAACTTGTTG+TGG | - | chr8.1:32666222-32666241 | None:intergenic | 35.0% |
| !!! | TTGTGCATGGTTTTAGGAAA+AGG | + | chr8.1:32666274-32666293 | MS.gene69983:CDS | 35.0% |
| AGTGCTTGCTTCATAGTTGT+TGG | - | chr8.1:32666394-32666413 | None:intergenic | 40.0% | |
| ATTTGGCTGTGATACATGTC+AGG | - | chr8.1:32665460-32665479 | None:intergenic | 40.0% | |
| CCTAAAACCATGCACAAATG+TGG | - | chr8.1:32666271-32666290 | None:intergenic | 40.0% | |
| GGCTGATTGAGTATGGAAAA+GGG | + | chr8.1:32666154-32666173 | MS.gene69983:CDS | 40.0% | |
| GTATCACAGCCAAATTGCAA+CGG | + | chr8.1:32665465-32665484 | MS.gene69983:CDS | 40.0% | |
| GTGGTACAAACAAGGTAGTT+TGG | - | chr8.1:32665390-32665409 | None:intergenic | 40.0% | |
| ! | AATTGGGATGTCTTTGGTTC+AGG | - | chr8.1:32665505-32665524 | None:intergenic | 40.0% |
| ! | CCACATTTGTGCATGGTTTT+AGG | + | chr8.1:32666268-32666287 | MS.gene69983:CDS | 40.0% |
| ! | CTGCTAGCTTCTCCATAATA+TGG | - | chr8.1:32666360-32666379 | None:intergenic | 40.0% |
| ! | GATGTCTTTGGTTCAGGTAA+CGG | - | chr8.1:32665499-32665518 | None:intergenic | 40.0% |
| ! | TCATGCTCTAATTGACTCCA+AGG | - | chr8.1:32665553-32665572 | None:intergenic | 40.0% |
| ! | TGATGAGTTCCTGTTTCTCT+TGG | - | chr8.1:32666331-32666350 | None:intergenic | 40.0% |
| !! | AAAGATACAGGTGTTGATGG+CGG | - | chr8.1:32665286-32665305 | None:intergenic | 40.0% |
| !! | AGATTAGGGTTGGTAGAAAC+GGG | - | chr8.1:32665340-32665359 | None:intergenic | 40.0% |
| !! | AGTTGATTTGGAGCTTCGTT+TGG | + | chr8.1:32666452-32666471 | MS.gene69983:CDS | 40.0% |
| !! | CAAACAAGGTAGTTTGGTGT+TGG | - | chr8.1:32665384-32665403 | None:intergenic | 40.0% |
| !! | GGATTTGGTGGTGAAGATTA+GGG | - | chr8.1:32665354-32665373 | None:intergenic | 40.0% |
| !! | GTTGATTTGGAGCTTCGTTT+GGG | + | chr8.1:32666453-32666472 | MS.gene69983:CDS | 40.0% |
| !! | TGGATTTGGTGGTGAAGATT+AGG | - | chr8.1:32665355-32665374 | None:intergenic | 40.0% |
| !! | TGGTGATGGAGAAGTTGATT+TGG | + | chr8.1:32666440-32666459 | MS.gene69983:CDS | 40.0% |
| AAACCATGCACAAATGTGGC+TGG | - | chr8.1:32666267-32666286 | None:intergenic | 45.0% | |
| ACTCTGCTTCCAAGAGAAAC+AGG | + | chr8.1:32666319-32666338 | MS.gene69983:CDS | 45.0% | |
| ATTTGAGGGGTCTCAAATCC+TGG | - | chr8.1:32665418-32665437 | None:intergenic | 45.0% | |
| CCCAATTCTCAAATGGAGCT+CGG | + | chr8.1:32665518-32665537 | MS.gene69983:CDS | 45.0% | |
| CCGAGCTCCATTTGAGAATT+GGG | - | chr8.1:32665521-32665540 | None:intergenic | 45.0% | |
| CTCTTGGAAGCAGAGTTGTT+GGG | - | chr8.1:32666315-32666334 | None:intergenic | 45.0% | |
| GCTGTGATACATGTCAGGTT+GGG | - | chr8.1:32665455-32665474 | None:intergenic | 45.0% | |
| GGGCTGATTGAGTATGGAAA+AGG | + | chr8.1:32666153-32666172 | MS.gene69983:CDS | 45.0% | |
| TCTCTTGGAAGCAGAGTTGT+TGG | - | chr8.1:32666316-32666335 | None:intergenic | 45.0% | |
| ! | CTGTGATACATGTCAGGTTG+GGG | - | chr8.1:32665454-32665473 | None:intergenic | 45.0% |
| !! | ACAAGGTAGTTTGGTGTTGG+AGG | - | chr8.1:32665381-32665400 | None:intergenic | 45.0% |
| !! | TAGTTTGGTGTTGGAGGTGA+TGG | - | chr8.1:32665375-32665394 | None:intergenic | 45.0% |
| !! | TTGGTGGTGAAGATTAGGGT+TGG | - | chr8.1:32665350-32665369 | None:intergenic | 45.0% |
| !! | AAAAAATTAATCATTAAATT+TGG | - | chr8.1:32665676-32665695 | None:intergenic | 5.0% |
| CATGCACAAATGTGGCTGGT+AGG | - | chr8.1:32666263-32666282 | None:intergenic | 50.0% | |
| CTACCAGCCACATTTGTGCA+TGG | + | chr8.1:32666261-32666280 | MS.gene69983:CDS | 50.0% | |
| CTGATGGGGCTGATTGAGTA+TGG | + | chr8.1:32666147-32666166 | MS.gene69983:CDS | 50.0% | |
| GCCGAGCTCCATTTGAGAAT+TGG | - | chr8.1:32665522-32665541 | None:intergenic | 50.0% | |
| GGCTGTGATACATGTCAGGT+TGG | - | chr8.1:32665456-32665475 | None:intergenic | 50.0% | |
| TTGTTTGTACCACCACCTCC+AGG | + | chr8.1:32665397-32665416 | MS.gene69983:CDS | 50.0% | |
| ! | TGGAGGTGGTGGTACAAACA+AGG | - | chr8.1:32665398-32665417 | None:intergenic | 50.0% |
| !! | GGTGTTGGAGGTGATGGATT+TGG | - | chr8.1:32665369-32665388 | None:intergenic | 50.0% |
| !! | GTTGGAGGTGATGGATTTGG+TGG | - | chr8.1:32665366-32665385 | None:intergenic | 50.0% |
| CCAACCGGTAGCGATTTGAG+GGG | - | chr8.1:32665431-32665450 | None:intergenic | 55.0% | |
| CCTAGTGCTTCTGCTGGTGA+TGG | + | chr8.1:32666426-32666445 | MS.gene69983:CDS | 55.0% | |
| CTCAAATGGAGCTCGGCTCA+GGG | + | chr8.1:32665525-32665544 | MS.gene69983:CDS | 55.0% | |
| GAGACCCCTCAAATCGCTAC+CGG | + | chr8.1:32665424-32665443 | MS.gene69983:CDS | 55.0% | |
| GCCAACCGGTAGCGATTTGA+GGG | - | chr8.1:32665432-32665451 | None:intergenic | 55.0% | |
| GTCTCAAATCCTGGAGGTGG+TGG | - | chr8.1:32665409-32665428 | None:intergenic | 55.0% | |
| TCTCAAATGGAGCTCGGCTC+AGG | + | chr8.1:32665524-32665543 | MS.gene69983:CDS | 55.0% | |
| TGAGGGGTCTCAAATCCTGG+AGG | - | chr8.1:32665415-32665434 | None:intergenic | 55.0% | |
| !! | AGAAGCACTAGGCGGAGTCA+TGG | - | chr8.1:32666418-32666437 | None:intergenic | 55.0% |
| !! | CCATCACCAGCAGAAGCACT+AGG | - | chr8.1:32666429-32666448 | None:intergenic | 55.0% |
| !! | GTGTTGATGGCGGTGAGTCA+GGG | - | chr8.1:32665276-32665295 | None:intergenic | 55.0% |
| !! | TCACCAGCAGAAGCACTAGG+CGG | - | chr8.1:32666426-32666445 | None:intergenic | 55.0% |
| ACTCCGCCTAGTGCTTCTGC+TGG | + | chr8.1:32666420-32666439 | MS.gene69983:CDS | 60.0% | |
| CCCCTCAAATCGCTACCGGT+TGG | + | chr8.1:32665428-32665447 | MS.gene69983:CDS | 60.0% | |
| GGCCAACCGGTAGCGATTTG+AGG | - | chr8.1:32665433-32665452 | None:intergenic | 60.0% | |
| GGGGTCTCAAATCCTGGAGG+TGG | - | chr8.1:32665412-32665431 | None:intergenic | 60.0% | |
| !! | CATGTCAGGTTGGGGCCAAC+CGG | - | chr8.1:32665446-32665465 | None:intergenic | 60.0% |
| !! | GGTGTTGATGGCGGTGAGTC+AGG | - | chr8.1:32665277-32665296 | None:intergenic | 60.0% |
| GAGCTCGGCTCAGGGTTCCT+TGG | + | chr8.1:32665533-32665552 | MS.gene69983:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 32665241 | 32666485 | 32665241 | ID=MS.gene69983 |
| chr8.1 | mRNA | 32665241 | 32666485 | 32665241 | ID=MS.gene69983.t1;Parent=MS.gene69983 |
| chr8.1 | exon | 32665241 | 32665572 | 32665241 | ID=MS.gene69983.t1.exon1;Parent=MS.gene69983.t1 |
| chr8.1 | CDS | 32665241 | 32665572 | 32665241 | ID=cds.MS.gene69983.t1;Parent=MS.gene69983.t1 |
| chr8.1 | exon | 32666140 | 32666485 | 32666140 | ID=MS.gene69983.t1.exon2;Parent=MS.gene69983.t1 |
| chr8.1 | CDS | 32666140 | 32666485 | 32666140 | ID=cds.MS.gene69983.t1;Parent=MS.gene69983.t1 |
| Gene Sequence |
| Protein sequence |
