Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69985.t1 | AET03563.1 | 86.8 | 242 | 28 | 3 | 1 | 239 | 1 | 241 | 3.10E-113 | 417.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69985.t1 | Q8S9H7 | 40.0 | 60 | 36 | 0 | 85 | 144 | 119 | 178 | 1.5e-07 | 58.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69985.t1 | G7L8M9 | 86.8 | 242 | 28 | 3 | 1 | 239 | 1 | 241 | 2.3e-113 | 417.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene69985.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69985.t1 | MTR_8g072990 | 89.256 | 242 | 22 | 3 | 1 | 239 | 1 | 241 | 1.33e-143 | 401 |
| MS.gene69985.t1 | MTR_6g043490 | 65.200 | 250 | 57 | 6 | 1 | 240 | 1 | 230 | 1.02e-94 | 277 |
| MS.gene69985.t1 | MTR_6g043480 | 63.600 | 250 | 61 | 7 | 1 | 240 | 1 | 230 | 1.31e-89 | 264 |
| MS.gene69985.t1 | MTR_8g073050 | 51.822 | 247 | 89 | 8 | 1 | 240 | 1 | 224 | 2.02e-55 | 177 |
| MS.gene69985.t1 | MTR_5g027570 | 40.299 | 67 | 40 | 0 | 93 | 159 | 87 | 153 | 3.21e-13 | 67.4 |
| MS.gene69985.t1 | MTR_8g063870 | 50.000 | 56 | 25 | 1 | 92 | 147 | 89 | 141 | 3.55e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 78 sgRNAs with CRISPR-Local
Find 97 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAATGCATAACATGATTT+CGG | 0.293208 | 8.1:+32715413 | MS.gene69985:CDS |
| AGTTGATTTGGAACTTCGTT+TGG | 0.333131 | 8.1:+32715584 | MS.gene69985:CDS |
| CCATGATAGGTTGGAACAAC+AGG | 0.337202 | 8.1:-32715471 | None:intergenic |
| TATTTGTGATGGGGATGATT+AGG | 0.340678 | 8.1:+32715214 | MS.gene69985:CDS |
| CCTGTTGTTCCAACCTATCA+TGG | 0.371424 | 8.1:+32715471 | MS.gene69985:CDS |
| GCTAGCTTCTCCTCCATGAT+AGG | 0.377201 | 8.1:-32715484 | None:intergenic |
| GATGAAGATATGGGTATTGA+TGG | 0.385170 | 8.1:-32714277 | None:intergenic |
| TGGTGCAACAGATGAAGATA+TGG | 0.391943 | 8.1:-32714287 | None:intergenic |
| TGTATTAGTTTATTTGTGAT+GGG | 0.392456 | 8.1:+32715204 | MS.gene69985:intron |
| TGGTGTTGGTGGTGAAGATT+AGG | 0.399314 | 8.1:-32714337 | None:intergenic |
| TTGTATTAGTTTATTTGTGA+TGG | 0.403857 | 8.1:+32715203 | MS.gene69985:intron |
| GAGCTGATGGTAAGGTAGTT+TGG | 0.407255 | 8.1:-32714357 | None:intergenic |
| GTTGATTTGGAACTTCGTTT+GGG | 0.424734 | 8.1:+32715585 | MS.gene69985:CDS |
| GAAAAGAGTGAGAGTTTCCT+TGG | 0.426296 | 8.1:-32715448 | None:intergenic |
| GTCGGAGAACCCTAGCAATT+AGG | 0.429758 | 8.1:-32714450 | None:intergenic |
| GAATCAAAATTATGTATCAT+TGG | 0.435669 | 8.1:-32714307 | None:intergenic |
| GCTATGCTACTAGCTTCTTC+AGG | 0.450363 | 8.1:+32715307 | MS.gene69985:CDS |
| ACTACCAACTGTCCTCAATC+TGG | 0.459036 | 8.1:+32714412 | MS.gene69985:CDS |
| AGTTGGTAGTGATCATTTGA+TGG | 0.459982 | 8.1:-32714399 | None:intergenic |
| CGTAGTCCTTCTGCTGGTGA+TGG | 0.464597 | 8.1:+32715558 | MS.gene69985:CDS |
| GTAAGGTAGTTTGGTGTTGG+TGG | 0.469673 | 8.1:-32714348 | None:intergenic |
| ATGGTAAGGTAGTTTGGTGT+TGG | 0.479447 | 8.1:-32714351 | None:intergenic |
| AAACCATGCACATATTCGTC+TGG | 0.484230 | 8.1:-32715336 | None:intergenic |
| TGCCATTCCCAAGTGGATCT+AGG | 0.486137 | 8.1:+32714494 | MS.gene69985:CDS |
| TGTCCTCAATCTGGCACTCA+TGG | 0.486448 | 8.1:+32714421 | MS.gene69985:CDS |
| TTAGGTATGGACAAGGGAGA+TGG | 0.490096 | 8.1:+32715232 | MS.gene69985:CDS |
| AGTGCTTGCTTCATAGTTGT+TGG | 0.490843 | 8.1:-32715523 | None:intergenic |
| AGAGTGAGAGTTTCCTTGGC+AGG | 0.497435 | 8.1:-32715444 | None:intergenic |
| TGGTGATGGAGGAGTTGATT+TGG | 0.501307 | 8.1:+32715572 | MS.gene69985:CDS |
| ATGGTGGTAGCCTAATTGCT+AGG | 0.506606 | 8.1:+32714440 | MS.gene69985:CDS |
| GAAGATATGGGTATTGATGG+AGG | 0.506856 | 8.1:-32714274 | None:intergenic |
| AAAGAAAATATGATTCCAAT+GGG | 0.509085 | 8.1:+32715364 | MS.gene69985:CDS |
| AATGGCATGGTGTTTGATCC+TGG | 0.510899 | 8.1:-32714478 | None:intergenic |
| AGATATGGGTATTGATGGAG+GGG | 0.512610 | 8.1:-32714272 | None:intergenic |
| TGGGTGTGTCCTTGAGCTGA+TGG | 0.515496 | 8.1:-32714370 | None:intergenic |
| GCATAGCTTTGAACTTGTTG+TGG | 0.515534 | 8.1:-32715291 | None:intergenic |
| AAAAGAAAATATGATTCCAA+TGG | 0.518688 | 8.1:+32715363 | MS.gene69985:CDS |
| AGGGTTCTCCGACCGTTACC+AGG | 0.518804 | 8.1:+32714460 | MS.gene69985:CDS |
| TGATCATTTGATGGGACTGA+TGG | 0.521014 | 8.1:-32714390 | None:intergenic |
| AAGATATGGGTATTGATGGA+GGG | 0.533718 | 8.1:-32714273 | None:intergenic |
| GTGTCCTTGAGCTGATGGTA+AGG | 0.534566 | 8.1:-32714365 | None:intergenic |
| AAGGAAGTATGTAAGATCAA+TGG | 0.547109 | 8.1:-32714245 | None:intergenic |
| TGCCTAGATCCACTTGGGAA+TGG | 0.547210 | 8.1:-32714496 | None:intergenic |
| TGGTGGTAGCCTAATTGCTA+GGG | 0.547474 | 8.1:+32714441 | MS.gene69985:CDS |
| GTATTGATGGAGGGGAGTCA+AGG | 0.547727 | 8.1:-32714264 | None:intergenic |
| GCTTCTCCTCCATGATAGGT+TGG | 0.551374 | 8.1:-32715480 | None:intergenic |
| GTTGGTAGTGATCATTTGAT+GGG | 0.561211 | 8.1:-32714398 | None:intergenic |
| CCACCATGAGTGCCAGATTG+AGG | 0.566054 | 8.1:-32714424 | None:intergenic |
| GTATTAGTTTATTTGTGATG+GGG | 0.567565 | 8.1:+32715205 | MS.gene69985:intron |
| GATCTAGGCACATGGTGTGT+TGG | 0.567632 | 8.1:+32714509 | MS.gene69985:CDS |
| AGTCCTTCTGCTGGTGATGG+AGG | 0.568217 | 8.1:+32715561 | MS.gene69985:CDS |
| ACTCTGCGTAGTCCTTCTGC+TGG | 0.571895 | 8.1:+32715552 | MS.gene69985:CDS |
| GGTGCAACAGATGAAGATAT+GGG | 0.573397 | 8.1:-32714286 | None:intergenic |
| GTGATGGGGATGATTAGGTA+TGG | 0.581299 | 8.1:+32715219 | MS.gene69985:CDS |
| AGAAGGACTACGCAGAGTCA+TGG | 0.582481 | 8.1:-32715547 | None:intergenic |
| GTAAGATCAATGGTCTCCAT+AGG | 0.586191 | 8.1:-32714235 | None:intergenic |
| AGTGCCAGATTGAGGACAGT+TGG | 0.594443 | 8.1:-32714416 | None:intergenic |
| CCCAAGTGGATCTAGGCACA+TGG | 0.602457 | 8.1:+32714501 | MS.gene69985:CDS |
| CATGCACATATTCGTCTGGT+AGG | 0.603146 | 8.1:-32715332 | None:intergenic |
| TTCGGACAACGATCCTGCCA+AGG | 0.604121 | 8.1:+32715431 | MS.gene69985:CDS |
| ACCATGTGCCTAGATCCACT+TGG | 0.605547 | 8.1:-32714502 | None:intergenic |
| GATCATTTGATGGGACTGAT+GGG | 0.605606 | 8.1:-32714389 | None:intergenic |
| ACTCCTCCATCACCAGCAGA+AGG | 0.621138 | 8.1:-32715564 | None:intergenic |
| CCTCAATCTGGCACTCATGG+TGG | 0.624726 | 8.1:+32714424 | MS.gene69985:CDS |
| TTGGTGGTGAAGATTAGGAT+CGG | 0.625676 | 8.1:-32714332 | None:intergenic |
| GGATGATGAGTTGATCCCAT+TGG | 0.629107 | 8.1:-32715379 | None:intergenic |
| AGATCCACTTGGGAATGGCA+TGG | 0.630755 | 8.1:-32714491 | None:intergenic |
| CCATGTGCCTAGATCCACTT+GGG | 0.631806 | 8.1:-32714501 | None:intergenic |
| CATGATAGGTTGGAACAACA+GGG | 0.637600 | 8.1:-32715470 | None:intergenic |
| ATGGTGTTTGATCCTGGTAA+CGG | 0.649197 | 8.1:-32714472 | None:intergenic |
| ACTACCTTACCATCAGCTCA+AGG | 0.650911 | 8.1:+32714361 | MS.gene69985:CDS |
| TGTTTGATCCTGGTAACGGT+CGG | 0.653269 | 8.1:-32714468 | None:intergenic |
| AACACCATGCCATTCCCAAG+TGG | 0.655209 | 8.1:+32714487 | MS.gene69985:CDS |
| GGGATGATTAGGTATGGACA+AGG | 0.664435 | 8.1:+32715225 | MS.gene69985:CDS |
| CTACCAGACGAATATGTGCA+TGG | 0.669323 | 8.1:+32715333 | MS.gene69985:CDS |
| GGATGATTAGGTATGGACAA+GGG | 0.676501 | 8.1:+32715226 | MS.gene69985:CDS |
| ATGCATTGAATAATATGATG+CGG | 0.722872 | 8.1:-32715400 | None:intergenic |
| GTTGTTCCAACCTATCATGG+AGG | 0.736279 | 8.1:+32715474 | MS.gene69985:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATTGACAAATTTATAGA+GGG | - | chr8.1:32714891-32714910 | None:intergenic | 15.0% |
| !! | TTAAAATAATGACAAATATC+AGG | - | chr8.1:32714707-32714726 | None:intergenic | 15.0% |
| !! | TTATATTGACAAATTTATAG+AGG | - | chr8.1:32714892-32714911 | None:intergenic | 15.0% |
| !!! | CATTATTTAATAACCTTTTT+TGG | - | chr8.1:32715059-32715078 | None:intergenic | 15.0% |
| !!! | TAATAAATTTTTGCCAAAAA+AGG | + | chr8.1:32715043-32715062 | MS.gene69985:intron | 15.0% |
| !! | AAAAGAAAATATGATTCCAA+TGG | + | chr8.1:32715363-32715382 | MS.gene69985:CDS | 20.0% |
| !! | AAAGAAAATATGATTCCAAT+GGG | + | chr8.1:32715364-32715383 | MS.gene69985:CDS | 20.0% |
| !! | ATCAGGTAAAGAAAAAAATT+GGG | - | chr8.1:32714690-32714709 | None:intergenic | 20.0% |
| !! | GAATCAAAATTATGTATCAT+TGG | - | chr8.1:32714310-32714329 | None:intergenic | 20.0% |
| !! | TACAAAAGTAAAATAAGAAC+AGG | - | chr8.1:32715188-32715207 | None:intergenic | 20.0% |
| !! | TATCAGGTAAAGAAAAAAAT+TGG | - | chr8.1:32714691-32714710 | None:intergenic | 20.0% |
| !! | TATTATTCAATAACCTATGA+AGG | - | chr8.1:32715028-32715047 | None:intergenic | 20.0% |
| !!! | TGTATTAGTTTATTTGTGAT+GGG | + | chr8.1:32715204-32715223 | MS.gene69985:intron | 20.0% |
| !!! | TTGTATTAGTTTATTTGTGA+TGG | + | chr8.1:32715203-32715222 | MS.gene69985:intron | 20.0% |
| ! | ATAACCTATGAAGGTTTAAT+TGG | - | chr8.1:32715019-32715038 | None:intergenic | 25.0% |
| ! | ATGCATTGAATAATATGATG+CGG | - | chr8.1:32715403-32715422 | None:intergenic | 25.0% |
| ! | TCAGGTAAAGAAAAAAATTG+GGG | - | chr8.1:32714689-32714708 | None:intergenic | 25.0% |
| ! | TTCAATGCATAACATGATTT+CGG | + | chr8.1:32715413-32715432 | MS.gene69985:CDS | 25.0% |
| !! | GTATTAGTTTATTTGTGATG+GGG | + | chr8.1:32715205-32715224 | MS.gene69985:intron | 25.0% |
| ATCTCCAATTAAACCTTCAT+AGG | + | chr8.1:32715012-32715031 | MS.gene69985:intron | 30.0% | |
| TGCCAGAAAAGTTGAAATAA+TGG | - | chr8.1:32714779-32714798 | None:intergenic | 30.0% | |
| TTCTGGCAATGATATTCTTA+CGG | + | chr8.1:32714791-32714810 | MS.gene69985:intron | 30.0% | |
| TTGAAATAATGGCCAATAAG+TGG | - | chr8.1:32714768-32714787 | None:intergenic | 30.0% | |
| ! | AAGGAAGTATGTAAGATCAA+TGG | - | chr8.1:32714248-32714267 | None:intergenic | 30.0% |
| CTCATTTCTACTCCACTTAT+TGG | + | chr8.1:32714753-32714772 | MS.gene69985:intron | 35.0% | |
| ! | GGCCATTATTTCAACTTTTC+TGG | + | chr8.1:32714774-32714793 | MS.gene69985:intron | 35.0% |
| ! | TATTTGTGATGGGGATGATT+AGG | + | chr8.1:32715214-32715233 | MS.gene69985:CDS | 35.0% |
| !! | AAGATATGGGTATTGATGGA+GGG | - | chr8.1:32714276-32714295 | None:intergenic | 35.0% |
| !! | AGTTGATTTGGAACTTCGTT+TGG | + | chr8.1:32715584-32715603 | MS.gene69985:CDS | 35.0% |
| !! | AGTTGGTAGTGATCATTTGA+TGG | - | chr8.1:32714402-32714421 | None:intergenic | 35.0% |
| !! | GATGAAGATATGGGTATTGA+TGG | - | chr8.1:32714280-32714299 | None:intergenic | 35.0% |
| !! | GTTGATTTGGAACTTCGTTT+GGG | + | chr8.1:32715585-32715604 | MS.gene69985:CDS | 35.0% |
| !! | GTTGGTAGTGATCATTTGAT+GGG | - | chr8.1:32714401-32714420 | None:intergenic | 35.0% |
| AAACCATGCACATATTCGTC+TGG | - | chr8.1:32715339-32715358 | None:intergenic | 40.0% | |
| AGTGCTTGCTTCATAGTTGT+TGG | - | chr8.1:32715526-32715545 | None:intergenic | 40.0% | |
| ATGGTGTTTGATCCTGGTAA+CGG | - | chr8.1:32714475-32714494 | None:intergenic | 40.0% | |
| GAAAAGAGTGAGAGTTTCCT+TGG | - | chr8.1:32715451-32715470 | None:intergenic | 40.0% | |
| GATCATTTGATGGGACTGAT+GGG | - | chr8.1:32714392-32714411 | None:intergenic | 40.0% | |
| GGATGATTAGGTATGGACAA+GGG | + | chr8.1:32715226-32715245 | MS.gene69985:CDS | 40.0% | |
| GGTGCAACAGATGAAGATAT+GGG | - | chr8.1:32714289-32714308 | None:intergenic | 40.0% | |
| GTAAGATCAATGGTCTCCAT+AGG | - | chr8.1:32714238-32714257 | None:intergenic | 40.0% | |
| TGATCATTTGATGGGACTGA+TGG | - | chr8.1:32714393-32714412 | None:intergenic | 40.0% | |
| TGGTGCAACAGATGAAGATA+TGG | - | chr8.1:32714290-32714309 | None:intergenic | 40.0% | |
| ! | CATGATAGGTTGGAACAACA+GGG | - | chr8.1:32715473-32715492 | None:intergenic | 40.0% |
| !! | AGATATGGGTATTGATGGAG+GGG | - | chr8.1:32714275-32714294 | None:intergenic | 40.0% |
| !! | ATGGTAAGGTAGTTTGGTGT+TGG | - | chr8.1:32714354-32714373 | None:intergenic | 40.0% |
| !! | GAAGATATGGGTATTGATGG+AGG | - | chr8.1:32714277-32714296 | None:intergenic | 40.0% |
| !! | GCATAGCTTTGAACTTGTTG+TGG | - | chr8.1:32715294-32715313 | None:intergenic | 40.0% |
| !! | TTGGTGGTGAAGATTAGGAT+CGG | - | chr8.1:32714335-32714354 | None:intergenic | 40.0% |
| AATGGCATGGTGTTTGATCC+TGG | - | chr8.1:32714481-32714500 | None:intergenic | 45.0% | |
| ACTACCAACTGTCCTCAATC+TGG | + | chr8.1:32714412-32714431 | MS.gene69985:CDS | 45.0% | |
| ACTACCTTACCATCAGCTCA+AGG | + | chr8.1:32714361-32714380 | MS.gene69985:CDS | 45.0% | |
| ATGGTGGTAGCCTAATTGCT+AGG | + | chr8.1:32714440-32714459 | MS.gene69985:CDS | 45.0% | |
| CATGCACATATTCGTCTGGT+AGG | - | chr8.1:32715335-32715354 | None:intergenic | 45.0% | |
| CCTGTTGTTCCAACCTATCA+TGG | + | chr8.1:32715471-32715490 | MS.gene69985:CDS | 45.0% | |
| CTACCAGACGAATATGTGCA+TGG | + | chr8.1:32715333-32715352 | MS.gene69985:CDS | 45.0% | |
| GAGCTGATGGTAAGGTAGTT+TGG | - | chr8.1:32714360-32714379 | None:intergenic | 45.0% | |
| GGGATGATTAGGTATGGACA+AGG | + | chr8.1:32715225-32715244 | MS.gene69985:CDS | 45.0% | |
| GTTGTTCCAACCTATCATGG+AGG | + | chr8.1:32715474-32715493 | MS.gene69985:CDS | 45.0% | |
| TGGTGGTAGCCTAATTGCTA+GGG | + | chr8.1:32714441-32714460 | MS.gene69985:CDS | 45.0% | |
| TTAGGTATGGACAAGGGAGA+TGG | + | chr8.1:32715232-32715251 | MS.gene69985:CDS | 45.0% | |
| ! | CCATGATAGGTTGGAACAAC+AGG | - | chr8.1:32715474-32715493 | None:intergenic | 45.0% |
| ! | GCTATGCTACTAGCTTCTTC+AGG | + | chr8.1:32715307-32715326 | MS.gene69985:CDS | 45.0% |
| ! | GTGATGGGGATGATTAGGTA+TGG | + | chr8.1:32715219-32715238 | MS.gene69985:CDS | 45.0% |
| !! | GGATGATGAGTTGATCCCAT+TGG | - | chr8.1:32715382-32715401 | None:intergenic | 45.0% |
| !! | GTAAGGTAGTTTGGTGTTGG+TGG | - | chr8.1:32714351-32714370 | None:intergenic | 45.0% |
| !! | TGGTGATGGAGGAGTTGATT+TGG | + | chr8.1:32715572-32715591 | MS.gene69985:CDS | 45.0% |
| !! | TGGTGTTGGTGGTGAAGATT+AGG | - | chr8.1:32714340-32714359 | None:intergenic | 45.0% |
| !! | TGTTTGATCCTGGTAACGGT+CGG | - | chr8.1:32714471-32714490 | None:intergenic | 45.0% |
| !! | AAAAAAATTAATTAGATTTA+AGG | - | chr8.1:32714569-32714588 | None:intergenic | 5.0% |
| !!! | AATTTAAATATCAAATTTTA+AGG | - | chr8.1:32715107-32715126 | None:intergenic | 5.0% |
| AACACCATGCCATTCCCAAG+TGG | + | chr8.1:32714487-32714506 | MS.gene69985:CDS | 50.0% | |
| ACCATGTGCCTAGATCCACT+TGG | - | chr8.1:32714505-32714524 | None:intergenic | 50.0% | |
| AGAAGGACTACGCAGAGTCA+TGG | - | chr8.1:32715550-32715569 | None:intergenic | 50.0% | |
| AGAGTGAGAGTTTCCTTGGC+AGG | - | chr8.1:32715447-32715466 | None:intergenic | 50.0% | |
| AGATCCACTTGGGAATGGCA+TGG | - | chr8.1:32714494-32714513 | None:intergenic | 50.0% | |
| AGTGCCAGATTGAGGACAGT+TGG | - | chr8.1:32714419-32714438 | None:intergenic | 50.0% | |
| CCATGTGCCTAGATCCACTT+GGG | - | chr8.1:32714504-32714523 | None:intergenic | 50.0% | |
| GATCTAGGCACATGGTGTGT+TGG | + | chr8.1:32714509-32714528 | MS.gene69985:CDS | 50.0% | |
| GCTTCTCCTCCATGATAGGT+TGG | - | chr8.1:32715483-32715502 | None:intergenic | 50.0% | |
| GTCGGAGAACCCTAGCAATT+AGG | - | chr8.1:32714453-32714472 | None:intergenic | 50.0% | |
| GTGTCCTTGAGCTGATGGTA+AGG | - | chr8.1:32714368-32714387 | None:intergenic | 50.0% | |
| TGCCATTCCCAAGTGGATCT+AGG | + | chr8.1:32714494-32714513 | MS.gene69985:CDS | 50.0% | |
| TGCCTAGATCCACTTGGGAA+TGG | - | chr8.1:32714499-32714518 | None:intergenic | 50.0% | |
| TGTCCTCAATCTGGCACTCA+TGG | + | chr8.1:32714421-32714440 | MS.gene69985:CDS | 50.0% | |
| ! | GCTAGCTTCTCCTCCATGAT+AGG | - | chr8.1:32715487-32715506 | None:intergenic | 50.0% |
| ! | GTATTGATGGAGGGGAGTCA+AGG | - | chr8.1:32714267-32714286 | None:intergenic | 50.0% |
| ACTCCTCCATCACCAGCAGA+AGG | - | chr8.1:32715567-32715586 | None:intergenic | 55.0% | |
| ACTCTGCGTAGTCCTTCTGC+TGG | + | chr8.1:32715552-32715571 | MS.gene69985:CDS | 55.0% | |
| CCACCATGAGTGCCAGATTG+AGG | - | chr8.1:32714427-32714446 | None:intergenic | 55.0% | |
| CCCAAGTGGATCTAGGCACA+TGG | + | chr8.1:32714501-32714520 | MS.gene69985:CDS | 55.0% | |
| CCTCAATCTGGCACTCATGG+TGG | + | chr8.1:32714424-32714443 | MS.gene69985:CDS | 55.0% | |
| CGTAGTCCTTCTGCTGGTGA+TGG | + | chr8.1:32715558-32715577 | MS.gene69985:CDS | 55.0% | |
| TGGGTGTGTCCTTGAGCTGA+TGG | - | chr8.1:32714373-32714392 | None:intergenic | 55.0% | |
| TTCGGACAACGATCCTGCCA+AGG | + | chr8.1:32715431-32715450 | MS.gene69985:CDS | 55.0% | |
| !! | AGTCCTTCTGCTGGTGATGG+AGG | + | chr8.1:32715561-32715580 | MS.gene69985:CDS | 55.0% |
| AGGGTTCTCCGACCGTTACC+AGG | + | chr8.1:32714460-32714479 | MS.gene69985:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 32714232 | 32715620 | 32714232 | ID=MS.gene69985 |
| chr8.1 | mRNA | 32714232 | 32715620 | 32714232 | ID=MS.gene69985.t1;Parent=MS.gene69985 |
| chr8.1 | exon | 32714232 | 32714548 | 32714232 | ID=MS.gene69985.t1.exon1;Parent=MS.gene69985.t1 |
| chr8.1 | CDS | 32714232 | 32714548 | 32714232 | ID=cds.MS.gene69985.t1;Parent=MS.gene69985.t1 |
| chr8.1 | exon | 32715212 | 32715620 | 32715212 | ID=MS.gene69985.t1.exon2;Parent=MS.gene69985.t1 |
| chr8.1 | CDS | 32715212 | 32715620 | 32715212 | ID=cds.MS.gene69985.t1;Parent=MS.gene69985.t1 |
| Gene Sequence |
| Protein sequence |
