AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene70138

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70138.t1 MTR_8g095390 89.557 316 29 2 1 316 1 312 6.19e-174 484
MS.gene70138.t1 MTR_3g097450 49.026 308 98 7 1 282 1 275 7.31e-89 268
MS.gene70138.t1 MTR_4g073420 47.022 319 124 9 1 312 1 281 3.21e-86 261
MS.gene70138.t1 MTR_5g079670 61.644 146 51 1 3 148 2 142 8.83e-66 206
MS.gene70138.t1 MTR_7g110830 57.862 159 67 0 1 159 1 159 1.16e-64 208
MS.gene70138.t1 MTR_4g105130 42.629 251 118 3 1 225 1 251 2.57e-64 207
MS.gene70138.t1 MTR_7g076740 65.672 134 45 1 1 133 1 134 3.28e-64 205
MS.gene70138.t1 MTR_1g085040 68.217 129 41 0 1 129 1 129 8.04e-64 206
MS.gene70138.t1 MTR_1g085640 52.247 178 78 1 1 178 1 171 1.51e-63 206
MS.gene70138.t1 MTR_4g091490 66.667 129 42 1 1 128 1 129 2.71e-63 204
MS.gene70138.t1 MTR_2g011660 67.442 129 41 1 1 128 1 129 4.89e-63 203
MS.gene70138.t1 MTR_2g089620 67.969 128 41 0 1 128 1 128 9.71e-63 202
MS.gene70138.t1 MTR_3g074520 63.636 132 48 0 1 132 1 132 1.03e-62 202
MS.gene70138.t1 MTR_4g478180 66.406 128 43 0 1 128 2 129 1.45e-62 202
MS.gene70138.t1 MTR_4g082290 49.746 197 96 1 1 197 1 194 3.08e-62 203
MS.gene70138.t1 MTR_7g011170 65.625 128 44 0 1 128 1 128 3.28e-62 200
MS.gene70138.t1 MTR_4g102380 65.891 129 44 0 1 129 1 129 7.67e-62 198
MS.gene70138.t1 MTR_4g082230 49.746 197 96 1 1 197 1 194 8.50e-62 202
MS.gene70138.t1 MTR_5g029840 66.406 128 43 0 1 128 1 128 1.66e-61 199
MS.gene70138.t1 MTR_3g077110 65.891 129 44 0 1 129 1 129 2.32e-61 199
MS.gene70138.t1 MTR_8g031360 57.233 159 66 2 1 157 1 159 3.55e-61 197
MS.gene70138.t1 MTR_5g078140 62.590 139 51 1 1 139 1 138 4.79e-61 197
MS.gene70138.t1 MTR_1g112760 55.414 157 59 1 3 159 4 149 1.11e-60 193
MS.gene70138.t1 MTR_3g065440 61.268 142 52 1 1 142 1 139 5.83e-60 194
MS.gene70138.t1 MTR_6g012690 55.346 159 69 1 1 157 1 159 9.78e-60 195
MS.gene70138.t1 MTR_7g111290 68.217 129 41 0 1 129 1 129 1.26e-59 196
MS.gene70138.t1 MTR_4g485530 64.000 125 44 1 3 126 2 126 4.15e-59 188
MS.gene70138.t1 MTR_3g083540 48.947 190 88 2 5 185 34 223 1.90e-58 190
MS.gene70138.t1 MTR_1g076150 58.278 151 59 1 1 151 1 147 4.40e-58 187
MS.gene70138.t1 MTR_1g100653 67.241 116 38 0 1 116 1 116 1.22e-57 188
MS.gene70138.t1 MTR_2g099740 59.859 142 54 1 1 142 1 139 5.14e-57 189
MS.gene70138.t1 MTR_8g017540 52.469 162 73 1 1 162 47 204 5.48e-57 189
MS.gene70138.t1 MTR_8g017440 52.761 163 72 2 1 162 1 159 6.34e-57 187
MS.gene70138.t1 MTR_5g007370 60.938 128 50 0 1 128 1 128 1.28e-56 185
MS.gene70138.t1 MTR_2g034790 51.648 182 74 4 1 178 1 172 1.47e-56 186
MS.gene70138.t1 MTR_4g121460 68.376 117 37 0 1 117 1 117 1.85e-56 186
MS.gene70138.t1 MTR_7g117730 51.786 168 80 1 1 167 1 168 2.77e-56 183
MS.gene70138.t1 MTR_3g461490 54.902 153 68 1 1 153 1 152 3.48e-56 185
MS.gene70138.t1 MTR_1g043080 55.333 150 67 0 1 150 1 150 4.47e-56 182
MS.gene70138.t1 MTR_8g017500 51.852 162 74 1 1 162 1 158 9.62e-56 184
MS.gene70138.t1 MTR_2g064160 62.903 124 46 0 6 129 5 128 1.27e-55 183
MS.gene70138.t1 MTR_4g125520 66.379 116 39 0 1 116 1 116 1.69e-55 182
MS.gene70138.t1 MTR_6g009430 52.980 151 68 1 1 151 1 148 1.88e-55 183
MS.gene70138.t1 MTR_8g027345 66.379 116 39 0 1 116 1 116 3.70e-55 181
MS.gene70138.t1 MTR_1g043050 53.247 154 71 1 1 154 1 153 4.84e-54 177
MS.gene70138.t1 MTR_7g115650 55.862 145 63 1 1 145 1 144 4.97e-54 176
MS.gene70138.t1 MTR_7g096930 65.517 116 40 0 1 116 1 116 1.66e-53 177
MS.gene70138.t1 MTR_8g098860 64.655 116 41 0 1 116 1 116 2.14e-53 177
MS.gene70138.t1 MTR_8g017340 62.400 125 46 1 1 124 1 125 9.15e-53 180
MS.gene70138.t1 MTR_8g017390 51.534 163 73 2 1 162 1 158 2.02e-52 179
MS.gene70138.t1 MTR_7g109320 64.662 133 46 1 1 132 1 133 2.08e-52 176
MS.gene70138.t1 MTR_5g010020 66.364 110 37 0 1 110 1 110 1.24e-51 174
MS.gene70138.t1 MTR_0008s0280 64.035 114 41 0 1 114 1 114 2.56e-51 169
MS.gene70138.t1 MTR_8g017350 61.600 125 47 1 1 124 1 125 2.86e-51 179
MS.gene70138.t1 MTR_2g067420 67.273 110 36 0 2 111 4 113 2.28e-50 170
MS.gene70138.t1 MTR_0140s0030 62.069 116 44 0 1 116 2 117 3.23e-50 170
MS.gene70138.t1 MTR_0489s0020 62.069 116 44 0 1 116 2 117 3.23e-50 170
MS.gene70138.t1 MTR_7g010210 59.483 116 47 0 1 116 1 116 5.60e-50 169
MS.gene70138.t1 MTR_2g089450 62.069 116 44 0 1 116 1 116 5.67e-50 167
MS.gene70138.t1 MTR_3g103570 39.744 234 130 3 1 226 1 231 6.03e-50 169
MS.gene70138.t1 MTR_0251s0050 50.000 158 67 2 1 146 1 158 7.24e-50 167
MS.gene70138.t1 MTR_7g010210 59.483 116 47 0 1 116 1 116 9.30e-50 167
MS.gene70138.t1 MTR_2g097910 66.990 103 34 0 14 116 22 124 9.41e-50 168
MS.gene70138.t1 MTR_1g017000 57.983 119 49 1 1 118 1 119 1.01e-49 166
MS.gene70138.t1 MTR_0063s0090 55.882 136 56 1 1 132 1 136 1.03e-49 165
MS.gene70138.t1 MTR_5g042030 64.348 115 41 0 14 128 9 123 1.19e-49 167
MS.gene70138.t1 MTR_7g087130 58.730 126 50 1 1 124 1 126 1.71e-49 168
MS.gene70138.t1 MTR_5g014990 44.286 210 97 5 1 197 1 203 2.40e-49 167
MS.gene70138.t1 MTR_4g065017 66.990 103 34 0 14 116 19 121 6.00e-49 166
MS.gene70138.t1 MTR_4g057635 57.252 131 54 2 1 130 1 130 7.84e-49 166
MS.gene70138.t1 MTR_0008s0390 55.882 136 54 3 1 134 1 132 8.05e-49 164
MS.gene70138.t1 MTR_1g017140 48.750 160 81 1 1 159 1 160 2.08e-48 165
MS.gene70138.t1 MTR_0008s0470 59.483 116 46 1 1 115 1 116 3.37e-48 163
MS.gene70138.t1 MTR_1g100667 56.489 131 55 2 1 130 1 130 4.09e-48 162
MS.gene70138.t1 MTR_7g102110 58.824 119 48 1 1 118 1 119 1.01e-47 161
MS.gene70138.t1 MTR_3g039990 59.483 116 47 0 1 116 2 117 1.48e-47 162
MS.gene70138.t1 MTR_3g028740 62.963 108 40 0 9 116 19 126 3.41e-47 162
MS.gene70138.t1 MTR_6g055910 44.809 183 87 3 7 186 9 180 9.22e-47 159
MS.gene70138.t1 MTR_6g090405 50.340 147 70 3 1 146 1 145 1.08e-46 158
MS.gene70138.t1 MTR_2g095520 62.162 111 41 1 1 110 1 111 3.08e-46 159
MS.gene70138.t1 MTR_7g035075 61.017 118 44 1 1 116 1 118 1.44e-45 154
MS.gene70138.t1 MTR_6g006030 61.017 118 44 1 1 116 1 118 2.01e-45 154
MS.gene70138.t1 MTR_6g012180 57.658 111 47 0 1 111 1 111 6.17e-45 155
MS.gene70138.t1 MTR_2g089420 57.759 116 48 1 1 116 1 115 6.53e-45 159
MS.gene70138.t1 MTR_4g097570 61.818 110 41 1 1 109 1 110 7.87e-45 154
MS.gene70138.t1 MTR_4g128670 61.261 111 42 1 1 110 1 111 1.20e-43 153
MS.gene70138.t1 MTR_1g073170 61.111 108 42 0 8 115 16 123 1.44e-43 150
MS.gene70138.t1 MTR_8g020490 56.897 116 46 1 1 116 1 112 2.81e-43 149
MS.gene70138.t1 MTR_4g097570 61.261 111 41 2 1 109 1 111 2.90e-43 150
MS.gene70138.t1 MTR_1g045610 59.091 110 45 0 6 115 15 124 5.45e-43 149
MS.gene70138.t1 MTR_4g100720 57.944 107 45 0 9 115 10 116 6.71e-43 146
MS.gene70138.t1 MTR_8g042410 63.725 102 37 0 14 115 39 140 7.14e-43 155
MS.gene70138.t1 MTR_1g110460 56.522 115 50 0 8 122 22 136 9.98e-43 149
MS.gene70138.t1 MTR_3g052430 62.745 102 38 0 14 115 43 144 2.17e-42 154
MS.gene70138.t1 MTR_0197s0010 47.059 153 78 2 16 165 5 157 4.04e-42 145
MS.gene70138.t1 MTR_3g052450 57.377 122 42 2 14 125 42 163 6.38e-42 152
MS.gene70138.t1 MTR_5g079120 42.767 159 90 1 9 166 58 216 1.64e-41 146
MS.gene70138.t1 MTR_1g062940 61.165 103 40 0 14 116 8 110 2.26e-41 143
MS.gene70138.t1 MTR_1g086530 52.101 119 57 0 14 132 35 153 1.60e-40 143
MS.gene70138.t1 MTR_1g086510 61.765 102 39 0 14 115 23 124 2.71e-40 142
MS.gene70138.t1 MTR_3g011610 57.843 102 43 0 14 115 39 140 7.80e-40 146
MS.gene70138.t1 MTR_5g079290 42.308 156 85 1 14 169 19 169 8.19e-39 138
MS.gene70138.t1 MTR_7g017260 42.331 163 87 3 14 174 27 184 1.00e-38 138
MS.gene70138.t1 MTR_5g079220 50.442 113 56 0 7 119 16 128 1.74e-38 137
MS.gene70138.t1 MTR_4g063100 54.808 104 47 0 12 115 7 110 1.86e-38 137
MS.gene70138.t1 MTR_1g021230 59.804 102 41 0 14 115 59 160 4.03e-38 140
MS.gene70138.t1 MTR_2g096380 42.953 149 79 2 9 154 3 148 8.32e-38 134
MS.gene70138.t1 MTR_5g078800 53.774 106 49 0 14 119 9 114 1.05e-37 135
MS.gene70138.t1 MTR_7g111290 70.930 86 25 0 44 129 2 87 3.60e-37 135
MS.gene70138.t1 MTR_0247s0040 56.000 100 44 0 14 113 9 108 5.12e-37 130
MS.gene70138.t1 MTR_2g033170 62.376 101 38 0 14 114 26 126 5.76e-37 135
MS.gene70138.t1 MTR_3g045430 46.617 133 70 1 1 132 1 133 6.51e-37 134
MS.gene70138.t1 MTR_1g083630 51.667 120 52 1 14 127 14 133 6.54e-37 139
MS.gene70138.t1 MTR_0001s0360 53.774 106 49 0 14 119 9 114 2.74e-36 131
MS.gene70138.t1 MTR_5g078930 53.271 107 50 0 14 120 11 117 6.59e-36 129
MS.gene70138.t1 MTR_5g078910 52.381 105 50 0 14 118 9 113 8.02e-36 131
MS.gene70138.t1 MTR_5g062790 53.097 113 51 2 12 123 9 120 1.68e-35 130
MS.gene70138.t1 MTR_5g078860 52.830 106 50 0 14 119 9 114 4.36e-35 129
MS.gene70138.t1 MTR_4g123040 60.396 101 40 0 14 114 26 126 8.83e-35 129
MS.gene70138.t1 MTR_2g088170 58.824 102 42 0 14 115 31 132 9.56e-35 132
MS.gene70138.t1 MTR_5g488170 52.212 113 52 2 12 123 12 123 1.09e-34 127
MS.gene70138.t1 MTR_5g088080 52.212 113 52 2 12 123 12 123 1.18e-34 127
MS.gene70138.t1 MTR_5g088150 52.212 113 52 2 12 123 12 123 1.18e-34 127
MS.gene70138.t1 MTR_5g488210 52.212 113 52 2 12 123 12 123 1.18e-34 127
MS.gene70138.t1 MTR_5g078950 53.000 100 47 0 14 113 9 108 1.25e-34 127
MS.gene70138.t1 MTR_8g060940 54.545 99 45 0 14 112 9 107 1.31e-34 126
MS.gene70138.t1 MTR_5g088640 52.212 113 52 2 12 123 12 123 1.67e-34 127
MS.gene70138.t1 MTR_0193s0090 50.485 103 51 0 14 116 9 111 3.27e-34 124
MS.gene70138.t1 MTR_6g055910 44.138 145 67 3 45 186 18 151 4.80e-33 122
MS.gene70138.t1 MTR_8g006470 50.000 108 53 1 8 114 6 113 1.82e-32 122
MS.gene70138.t1 MTR_5g007300 57.955 88 37 0 1 88 53 140 8.52e-32 116
MS.gene70138.t1 MTR_5g016510 44.872 156 84 2 14 169 5 158 1.66e-31 120
MS.gene70138.t1 MTR_4g063100 65.753 73 25 0 43 115 9 81 2.29e-31 117
MS.gene70138.t1 MTR_4g019370 40.437 183 97 4 14 195 38 209 4.25e-31 120
MS.gene70138.t1 MTR_4g029540 45.528 123 64 2 8 127 6 128 3.69e-30 116
MS.gene70138.t1 MTR_2g096380 47.826 115 54 2 43 154 18 129 1.00e-29 113
MS.gene70138.t1 MTR_5g088610 50.442 113 54 2 12 123 9 120 2.44e-29 115
MS.gene70138.t1 MTR_5g070020 47.170 106 54 2 14 119 122 225 3.24e-29 115
MS.gene70138.t1 MTR_4g094982 45.070 142 68 3 14 149 5 142 3.08e-28 110
MS.gene70138.t1 MTR_4g128190 51.402 107 37 3 14 119 13 105 3.29e-28 109
MS.gene70138.t1 MTR_3g463400 45.283 106 56 2 14 119 133 236 9.45e-28 112
MS.gene70138.t1 MTR_5g049190 35.366 164 102 3 14 175 19 180 6.71e-27 106
MS.gene70138.t1 MTR_7g035350 33.486 218 128 6 11 228 222 422 1.48e-26 108
MS.gene70138.t1 MTR_6g015455 35.341 249 143 8 14 260 5 237 2.03e-26 110
MS.gene70138.t1 MTR_3g101290 50.000 102 50 1 14 115 37 137 3.25e-26 103
MS.gene70138.t1 MTR_7g037260 44.643 112 57 2 8 115 135 245 3.40e-26 106
MS.gene70138.t1 MTR_4g105660 48.598 107 51 3 14 119 180 283 4.18e-26 107
MS.gene70138.t1 MTR_1g085880 44.800 125 67 2 17 140 17 140 4.24e-26 102
MS.gene70138.t1 MTR_7g451170 43.750 112 58 2 8 115 181 291 4.87e-26 107
MS.gene70138.t1 MTR_3g077650 32.979 188 100 5 3 167 168 352 9.25e-26 106
MS.gene70138.t1 MTR_7g061330 44.860 107 50 2 14 116 113 214 1.18e-25 107
MS.gene70138.t1 MTR_7g461410 44.860 107 50 2 14 116 113 214 1.18e-25 107
MS.gene70138.t1 MTR_7g061330 44.860 107 50 2 14 116 77 178 2.12e-25 106
MS.gene70138.t1 MTR_1g085770 44.800 125 67 2 17 140 17 140 3.18e-25 103
MS.gene70138.t1 MTR_4g088015 44.554 101 55 1 14 114 221 320 3.58e-25 105
MS.gene70138.t1 MTR_5g082910 49.495 99 49 1 14 112 19 116 4.37e-25 102
MS.gene70138.t1 MTR_3g110028 42.857 105 59 1 14 118 85 188 2.73e-24 103
MS.gene70138.t1 MTR_1g057980 45.631 103 54 2 14 116 80 180 3.23e-24 100
MS.gene70138.t1 MTR_1g026870 43.810 105 58 1 14 118 85 188 5.07e-24 103
MS.gene70138.t1 MTR_6g074860 40.650 123 62 4 14 129 4 122 1.19e-23 97.4
MS.gene70138.t1 MTR_7g450950 41.509 106 60 2 11 116 154 257 4.12e-22 95.1
MS.gene70138.t1 MTR_5g010650 45.833 96 51 1 14 109 110 204 9.37e-22 95.5
MS.gene70138.t1 MTR_7g037130 39.669 121 65 3 7 120 134 253 1.45e-21 94.0
MS.gene70138.t1 MTR_3g089045 45.098 102 55 1 14 115 16 116 3.23e-21 92.0
MS.gene70138.t1 MTR_4g082040 39.474 114 63 2 2 115 98 205 4.22e-21 93.6
MS.gene70138.t1 MTR_5g041570 41.748 103 59 1 14 116 134 235 4.47e-21 93.6
MS.gene70138.t1 MTR_7g061550 31.443 194 107 5 13 182 6 197 1.69e-20 90.9
MS.gene70138.t1 MTR_6g027340 39.175 97 58 1 14 110 16 111 1.89e-20 87.8
MS.gene70138.t1 MTR_6g027360 38.235 102 62 1 14 115 78 178 3.65e-20 89.4
MS.gene70138.t1 MTR_7g086960 32.984 191 112 5 1 182 81 264 4.54e-20 89.7
MS.gene70138.t1 MTR_6g027370 33.333 156 101 2 14 169 99 251 7.32e-20 89.0
MS.gene70138.t1 MTR_0023s0210 44.000 75 42 0 14 88 9 83 8.98e-19 79.7
MS.gene70138.t1 MTR_6g055910 38.983 118 57 4 72 186 5 110 4.06e-17 79.0
MS.gene70138.t1 MTR_8g017480 59.615 52 21 0 1 52 1 52 3.89e-15 68.9
MS.gene70138.t1 MTR_5g038910 35.354 99 63 1 17 115 29 126 1.14e-14 74.7
MS.gene70138.t1 MTR_4g063100 60.870 46 18 0 70 115 1 46 2.48e-14 70.9
MS.gene70138.t1 MTR_5g038910 35.354 99 63 1 17 115 29 126 3.09e-14 73.2
MS.gene70138.t1 MTR_8g468380 36.364 99 61 2 17 114 25 122 3.80e-14 73.2
MS.gene70138.t1 MTR_2g096380 40.909 88 46 2 70 154 1 85 3.97e-14 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70138.t1 AT4G38620 76.510 149 34 1 1 149 1 148 7.89e-82 249
MS.gene70138.t1 AT2G16720 82.171 129 23 0 1 129 1 129 8.97e-81 246
MS.gene70138.t1 AT4G09460 63.483 178 50 2 1 176 1 165 2.07e-78 239
MS.gene70138.t1 AT4G34990 67.296 159 44 1 1 159 1 151 3.91e-78 239
MS.gene70138.t1 AT1G22640 80.315 127 25 0 1 127 1 127 2.25e-77 237
MS.gene70138.t1 AT1G35515 78.571 126 27 0 1 126 1 126 7.29e-74 226
MS.gene70138.t1 AT4G12350 49.495 198 90 2 1 198 1 188 2.26e-66 210
MS.gene70138.t1 AT5G26660 60.248 161 61 1 1 161 1 158 5.79e-66 211
MS.gene70138.t1 AT5G16770 67.188 128 42 0 1 128 1 128 1.19e-65 209
MS.gene70138.t1 AT5G16770 67.188 128 42 0 1 128 1 128 1.19e-65 209
MS.gene70138.t1 AT3G02940 68.750 128 40 0 1 128 1 128 2.53e-65 208
MS.gene70138.t1 AT5G16770 67.188 128 42 0 1 128 1 128 3.08e-65 209
MS.gene70138.t1 AT5G16770 67.188 128 42 0 1 128 1 128 3.08e-65 209
MS.gene70138.t1 AT1G57560 54.688 192 78 2 1 183 1 192 3.21e-65 207
MS.gene70138.t1 AT4G21440 62.162 148 53 1 1 145 1 148 4.32e-65 209
MS.gene70138.t1 AT1G57560 59.494 158 63 1 1 158 1 157 4.98e-65 207
MS.gene70138.t1 AT3G02940 68.750 128 40 0 1 128 1 128 6.37e-65 207
MS.gene70138.t1 AT3G02940 68.750 128 40 0 1 128 1 128 6.37e-65 207
MS.gene70138.t1 AT4G22680 68.992 129 40 0 1 129 1 129 9.13e-65 205
MS.gene70138.t1 AT4G28110 67.188 128 42 0 1 128 1 128 1.74e-64 205
MS.gene70138.t1 AT1G09540 56.395 172 74 1 1 171 1 172 9.42e-64 206
MS.gene70138.t1 AT3G61250 57.516 153 65 0 1 153 1 153 2.18e-63 202
MS.gene70138.t1 AT4G05100 68.217 129 40 1 1 128 1 129 3.39e-63 203
MS.gene70138.t1 AT5G15310 51.053 190 85 3 1 185 1 187 8.70e-63 199
MS.gene70138.t1 AT4G01680 51.232 203 88 3 1 203 1 192 1.43e-62 199
MS.gene70138.t1 AT5G15310 51.053 190 85 3 1 185 1 187 4.08e-62 200
MS.gene70138.t1 AT5G15310 51.053 190 85 3 1 185 1 187 4.89e-62 200
MS.gene70138.t1 AT4G01680 66.667 132 44 0 1 132 1 132 9.62e-62 200
MS.gene70138.t1 AT5G07690 64.341 129 46 0 1 129 1 129 2.91e-61 198
MS.gene70138.t1 AT1G34670 63.636 132 48 0 1 132 1 132 4.92e-61 199
MS.gene70138.t1 AT3G01140 51.075 186 82 1 1 186 1 177 5.19e-61 198
MS.gene70138.t1 AT1G74080 55.280 161 70 1 1 161 1 159 7.93e-61 197
MS.gene70138.t1 AT5G16600 60.417 144 57 0 1 144 1 144 1.46e-60 196
MS.gene70138.t1 AT5G61420 63.566 129 47 0 1 129 1 129 1.81e-60 197
MS.gene70138.t1 AT5G60890 62.791 129 48 0 1 129 1 129 2.28e-60 195
MS.gene70138.t1 AT1G66230 63.566 129 47 0 1 129 1 129 4.91e-60 194
MS.gene70138.t1 AT3G13540 63.492 126 46 0 4 129 15 140 7.81e-60 192
MS.gene70138.t1 AT1G18570 64.615 130 45 1 1 129 1 130 8.32e-60 195
MS.gene70138.t1 AT5G10280 60.938 128 50 0 1 128 1 128 1.43e-59 194
MS.gene70138.t1 AT5G65230 64.844 128 45 0 1 128 1 128 1.53e-59 193
MS.gene70138.t1 AT4G17785 64.341 129 45 1 1 128 1 129 1.72e-59 194
MS.gene70138.t1 AT4G17785 64.341 129 45 1 1 128 1 129 1.76e-59 194
MS.gene70138.t1 AT5G07700 62.016 129 49 0 1 129 1 129 9.28e-59 192
MS.gene70138.t1 AT5G07700 62.016 129 49 0 1 129 1 129 9.28e-59 192
MS.gene70138.t1 AT4G01680 62.411 141 41 1 1 129 1 141 3.08e-58 191
MS.gene70138.t1 AT3G01140 50.273 183 82 1 4 186 47 220 6.60e-58 191
MS.gene70138.t1 AT5G62320 61.654 133 44 1 2 127 3 135 1.85e-57 186
MS.gene70138.t1 AT3G23250 49.457 184 90 2 1 183 1 182 3.53e-57 186
MS.gene70138.t1 AT5G49330 67.797 118 38 0 1 118 1 118 6.12e-57 187
MS.gene70138.t1 AT2G47460 61.429 140 54 0 1 140 1 140 1.06e-56 187
MS.gene70138.t1 AT5G14340 59.398 133 54 0 1 133 13 145 1.18e-56 184
MS.gene70138.t1 AT5G54230 65.625 128 44 0 1 128 1 128 1.27e-56 186
MS.gene70138.t1 AT3G13890 66.949 118 39 0 1 118 1 118 3.28e-56 186
MS.gene70138.t1 AT5G56110 59.091 132 54 0 1 132 1 132 3.82e-56 185
MS.gene70138.t1 AT1G06180 51.667 180 80 2 1 180 1 173 5.70e-56 182
MS.gene70138.t1 AT3G62610 53.750 160 69 1 1 160 1 155 5.95e-56 185
MS.gene70138.t1 AT3G12720 62.810 121 45 0 6 126 16 136 6.96e-56 184
MS.gene70138.t1 AT2G31180 54.088 159 62 1 1 148 1 159 5.14e-55 179
MS.gene70138.t1 AT1G16490 54.605 152 59 1 2 153 4 145 2.70e-54 179
MS.gene70138.t1 AT1G79180 67.826 115 37 0 2 116 4 118 7.85e-54 178
MS.gene70138.t1 AT1G63910 55.705 149 58 1 1 149 1 141 1.41e-53 179
MS.gene70138.t1 AT3G13890 62.205 127 39 1 1 118 1 127 4.46e-53 178
MS.gene70138.t1 AT3G28470 50.000 164 81 1 1 164 1 163 1.33e-52 176
MS.gene70138.t1 AT3G12820 65.812 117 40 0 3 119 5 121 4.17e-52 172
MS.gene70138.t1 AT1G56160 64.348 115 41 0 2 116 4 118 2.13e-51 172
MS.gene70138.t1 AT1G74430 55.639 133 59 0 1 133 1 133 3.55e-51 170
MS.gene70138.t1 AT1G74650 62.931 116 43 0 1 116 1 116 1.70e-50 170
MS.gene70138.t1 AT2G36890 48.876 178 76 2 1 177 1 164 2.25e-49 166
MS.gene70138.t1 AT3G47600 60.345 116 46 0 1 116 1 116 4.03e-49 167
MS.gene70138.t1 AT5G14750 45.304 181 89 3 14 194 18 188 7.98e-49 162
MS.gene70138.t1 AT2G36890 48.876 178 76 2 1 177 42 205 8.14e-49 166
MS.gene70138.t1 AT5G62470 61.207 116 45 0 1 116 1 116 8.85e-49 166
MS.gene70138.t1 AT1G08810 62.069 116 44 0 1 116 1 116 1.00e-48 164
MS.gene70138.t1 AT4G37780 60.833 120 46 1 1 119 1 120 3.62e-48 164
MS.gene70138.t1 AT5G57620 59.167 120 48 1 1 119 1 120 4.37e-48 164
MS.gene70138.t1 AT3G28910 55.039 129 56 1 1 129 1 127 1.22e-47 163
MS.gene70138.t1 AT5G23000 59.829 117 46 1 1 116 1 117 1.27e-47 163
MS.gene70138.t1 AT5G62470 61.207 116 44 1 1 116 1 115 3.02e-47 162
MS.gene70138.t1 AT5G65790 57.500 120 50 1 1 119 1 120 3.23e-47 163
MS.gene70138.t1 AT1G79180 52.703 148 37 1 2 116 4 151 3.44e-47 162
MS.gene70138.t1 AT5G12870 65.049 103 36 0 14 116 20 122 5.64e-47 160
MS.gene70138.t1 AT3G08500 62.037 108 41 0 9 116 27 134 7.67e-47 161
MS.gene70138.t1 AT3G49690 57.500 120 50 1 1 119 1 120 1.08e-46 160
MS.gene70138.t1 AT3G01530 48.148 162 82 1 14 175 27 186 6.18e-46 155
MS.gene70138.t1 AT5G40330 56.881 109 46 1 9 116 8 116 4.17e-45 153
MS.gene70138.t1 AT3G27810 52.448 143 55 2 14 156 22 151 4.24e-44 150
MS.gene70138.t1 AT5G40350 50.350 143 71 0 14 156 19 161 4.67e-44 150
MS.gene70138.t1 AT5G35550 59.259 108 44 0 9 116 11 118 6.42e-44 151
MS.gene70138.t1 AT3G27920 52.500 120 54 1 8 124 10 129 1.13e-43 150
MS.gene70138.t1 AT3G11440 62.745 102 38 0 14 115 43 144 2.29e-43 155
MS.gene70138.t1 AT5G26660 59.829 117 44 1 45 161 14 127 3.25e-43 151
MS.gene70138.t1 AT1G18710 46.032 189 81 3 1 188 1 169 4.58e-43 149
MS.gene70138.t1 AT5G55020 63.107 103 38 0 14 116 28 130 5.37e-43 155
MS.gene70138.t1 AT3G48920 58.491 106 44 0 9 114 15 120 9.26e-43 148
MS.gene70138.t1 AT3G11440 62.745 102 38 0 14 115 43 144 1.00e-42 155
MS.gene70138.t1 AT3G11440 62.745 102 38 0 14 115 43 144 1.00e-42 155
MS.gene70138.t1 AT3G11440 62.745 102 38 0 14 115 43 144 1.00e-42 155
MS.gene70138.t1 AT3G24310 63.725 102 37 0 14 115 20 121 2.35e-42 147
MS.gene70138.t1 AT4G13480 64.706 102 36 0 14 115 8 109 2.54e-42 147
MS.gene70138.t1 AT1G25340 38.967 213 115 5 14 221 20 222 5.33e-42 147
MS.gene70138.t1 AT4G26930 62.376 101 38 0 14 114 21 121 6.47e-42 149
MS.gene70138.t1 AT4G25560 62.745 102 38 0 14 115 12 113 9.25e-42 146
MS.gene70138.t1 AT2G26960 42.541 181 88 3 9 173 17 197 9.90e-42 150
MS.gene70138.t1 AT5G06100 60.784 102 40 0 14 115 34 135 1.43e-41 150
MS.gene70138.t1 AT5G52260 58.261 115 48 0 1 115 1 115 2.61e-41 145
MS.gene70138.t1 AT5G06100 60.784 102 40 0 14 115 34 135 4.56e-41 150
MS.gene70138.t1 AT5G06100 60.784 102 40 0 14 115 34 135 4.56e-41 150
MS.gene70138.t1 AT5G06100 60.784 102 40 0 14 115 34 135 4.56e-41 150
MS.gene70138.t1 AT5G06100 60.784 102 40 0 14 115 34 135 4.56e-41 150
MS.gene70138.t1 AT2G32460 59.804 102 41 0 14 115 20 121 5.41e-41 149
MS.gene70138.t1 AT2G32460 59.804 102 41 0 14 115 8 109 5.72e-41 149
MS.gene70138.t1 AT5G52600 41.176 170 91 1 9 169 9 178 6.72e-41 142
MS.gene70138.t1 AT2G47190 40.415 193 95 3 8 180 16 208 1.11e-40 143
MS.gene70138.t1 AT1G68320 59.804 102 41 0 14 115 21 122 6.40e-40 142
MS.gene70138.t1 AT1G48000 58.416 101 42 0 14 114 34 134 9.12e-40 140
MS.gene70138.t1 AT3G30210 61.386 101 39 0 14 114 29 129 1.12e-39 140
MS.gene70138.t1 AT3G53200 60.784 102 40 0 14 115 11 112 2.12e-39 139
MS.gene70138.t1 AT5G49620 48.077 156 69 1 8 151 22 177 2.69e-38 138
MS.gene70138.t1 AT5G59780 54.206 107 49 0 9 115 5 111 3.00e-38 135
MS.gene70138.t1 AT3G46130 51.261 119 56 1 8 124 5 123 3.84e-38 136
MS.gene70138.t1 AT3G06490 56.303 119 52 0 14 132 21 139 9.71e-38 137
MS.gene70138.t1 AT1G25340 37.559 213 113 6 14 221 20 217 2.60e-37 134
MS.gene70138.t1 AT1G25340 37.559 213 113 6 14 221 20 217 5.33e-37 134
MS.gene70138.t1 AT1G22640 81.429 70 13 0 58 127 1 70 6.50e-37 131
MS.gene70138.t1 AT5G14750 45.161 155 72 4 40 194 13 154 3.15e-36 128
MS.gene70138.t1 AT1G66370 51.304 115 52 1 1 115 1 111 5.49e-36 130
MS.gene70138.t1 AT5G49620 44.118 170 69 2 8 151 22 191 1.25e-34 129
MS.gene70138.t1 AT1G66380 56.863 102 44 0 14 115 10 111 1.78e-33 120
MS.gene70138.t1 AT2G26950 47.788 113 58 1 9 121 13 124 3.32e-33 126
MS.gene70138.t1 AT3G12820 73.611 72 19 0 48 119 2 73 3.78e-33 121
MS.gene70138.t1 AT1G56650 37.019 208 107 5 14 207 10 207 3.37e-32 120
MS.gene70138.t1 AT1G66390 55.882 102 45 0 14 115 10 111 4.49e-32 120
MS.gene70138.t1 AT3G60460 49.541 109 54 1 7 114 6 114 1.52e-31 120
MS.gene70138.t1 AT5G35550 63.636 77 28 0 40 116 45 121 6.38e-31 117
MS.gene70138.t1 AT3G47600 66.667 72 24 0 45 116 39 110 1.75e-30 117
MS.gene70138.t1 AT3G27810 35.533 197 81 4 45 241 4 154 1.78e-30 114
MS.gene70138.t1 AT3G46130 61.446 83 30 1 44 124 9 91 2.59e-30 115
MS.gene70138.t1 AT3G53200 67.606 71 23 0 45 115 9 79 2.84e-30 114
MS.gene70138.t1 AT5G40350 47.321 112 59 0 45 156 5 116 4.57e-30 112
MS.gene70138.t1 AT5G59780 67.606 71 23 0 45 115 20 90 4.64e-30 114
MS.gene70138.t1 AT3G46130 62.195 82 29 1 45 124 20 101 5.92e-30 114
MS.gene70138.t1 AT3G09230 41.243 177 88 5 14 185 55 220 1.17e-29 117
MS.gene70138.t1 AT5G67300 41.463 164 85 5 14 172 6 163 5.07e-29 113
MS.gene70138.t1 AT1G71030 44.526 137 71 3 51 183 5 140 8.05e-29 109
MS.gene70138.t1 AT5G40360 43.220 118 65 2 1 118 145 260 8.88e-29 114
MS.gene70138.t1 AT1G71030 58.442 77 32 0 51 127 19 95 1.34e-28 109
MS.gene70138.t1 AT3G50060 49.020 102 51 1 14 115 6 106 3.64e-27 108
MS.gene70138.t1 AT3G23250 43.939 132 61 3 58 183 1 125 4.48e-27 106
MS.gene70138.t1 AT3G27785 47.170 106 54 2 14 119 189 292 5.09e-27 110
MS.gene70138.t1 AT3G55730 53.398 103 45 2 14 115 56 156 8.41e-27 109
MS.gene70138.t1 AT5G14750 47.619 105 49 2 58 162 1 99 1.07e-26 102
MS.gene70138.t1 AT5G14750 47.619 105 49 2 58 162 1 99 1.07e-26 102
MS.gene70138.t1 AT5G58850 44.118 102 56 1 14 115 105 205 1.21e-26 109
MS.gene70138.t1 AT4G37260 43.262 141 66 3 14 141 13 152 1.44e-26 107
MS.gene70138.t1 AT4G18770 44.340 106 58 1 14 119 217 321 2.08e-26 108
MS.gene70138.t1 AT2G23290 50.980 102 49 1 14 115 13 113 2.09e-26 106
MS.gene70138.t1 AT2G39880 50.980 102 49 1 14 115 50 150 2.16e-26 107
MS.gene70138.t1 AT1G18960 43.220 118 60 4 14 129 10 122 3.80e-26 105
MS.gene70138.t1 AT5G02320 44.660 103 56 1 14 116 127 228 7.18e-26 107
MS.gene70138.t1 AT5G02320 44.660 103 56 1 14 116 127 228 7.18e-26 107
MS.gene70138.t1 AT5G02320 44.660 103 56 1 14 116 67 168 1.25e-25 107
MS.gene70138.t1 AT4G32730 30.556 216 127 5 14 225 87 283 1.39e-25 107
MS.gene70138.t1 AT4G32730 30.556 216 127 5 14 225 87 283 1.39e-25 107
MS.gene70138.t1 AT4G32730 30.556 216 127 5 14 225 87 283 1.39e-25 107
MS.gene70138.t1 AT4G32730 30.556 216 127 5 14 225 87 283 1.39e-25 107
MS.gene70138.t1 AT4G32730 30.556 216 127 5 14 225 87 283 1.46e-25 107
MS.gene70138.t1 AT5G11050 43.137 102 57 1 14 115 105 205 3.04e-25 105
MS.gene70138.t1 AT3G09370 44.340 106 50 2 14 115 130 230 1.53e-24 103
MS.gene70138.t1 AT3G09370 37.580 157 84 3 14 161 135 286 1.57e-24 103
MS.gene70138.t1 AT3G09370 37.580 157 84 3 14 161 143 294 1.66e-24 103
MS.gene70138.t1 AT1G66380 59.722 72 29 0 44 115 7 78 4.46e-24 94.7
MS.gene70138.t1 AT5G11510 41.905 105 60 1 14 118 81 184 1.32e-23 102
MS.gene70138.t1 AT5G11510 33.654 104 67 2 10 112 25 127 9.79e-12 66.2
MS.gene70138.t1 AT5G11510 41.905 105 60 1 14 118 81 184 1.32e-23 102
MS.gene70138.t1 AT5G11510 33.654 104 67 2 10 112 25 127 9.79e-12 66.2
MS.gene70138.t1 AT5G11510 41.905 105 60 1 14 118 81 184 1.32e-23 102
MS.gene70138.t1 AT5G11510 33.654 104 67 2 10 112 25 127 9.79e-12 66.2
MS.gene70138.t1 AT5G11510 41.905 105 60 1 14 118 81 184 1.82e-23 101
MS.gene70138.t1 AT5G11510 33.654 104 67 2 10 112 25 127 1.01e-11 66.2
MS.gene70138.t1 AT5G11510 41.905 105 60 1 14 118 81 184 1.93e-23 101
MS.gene70138.t1 AT5G11510 33.654 104 67 2 10 112 25 127 1.14e-11 65.9
MS.gene70138.t1 AT1G17950 42.105 114 59 2 14 121 5 117 3.29e-23 96.7
MS.gene70138.t1 AT2G25230 39.316 117 70 1 4 120 16 131 1.68e-22 94.4
MS.gene70138.t1 AT1G69560 40.741 108 63 1 9 116 118 224 4.77e-22 95.1
MS.gene70138.t1 AT1G69560 40.741 108 63 1 9 116 102 208 5.68e-22 94.7
MS.gene70138.t1 AT5G17800 38.462 130 77 2 14 143 93 219 2.11e-21 93.2
MS.gene70138.t1 AT1G26780 42.157 102 58 1 14 115 98 198 2.71e-21 92.0
MS.gene70138.t1 AT1G26780 42.157 102 58 1 14 115 98 198 4.11e-21 92.8
MS.gene70138.t1 AT4G33450 37.168 113 65 2 3 115 13 119 7.54e-21 90.1
MS.gene70138.t1 AT1G73410 44.660 103 54 2 14 115 6 106 8.19e-21 89.7
MS.gene70138.t1 AT1G73410 44.660 103 54 2 14 115 6 106 1.17e-20 88.6
MS.gene70138.t1 AT3G29020 38.835 103 62 1 14 116 67 168 3.10e-20 89.4
MS.gene70138.t1 AT3G29020 38.835 103 62 1 14 116 65 166 3.25e-20 88.2
MS.gene70138.t1 AT4G00540 43.396 106 56 2 14 116 103 207 4.40e-20 90.5
MS.gene70138.t1 AT4G00540 43.396 106 56 2 14 116 101 205 7.21e-20 90.1
MS.gene70138.t1 AT1G66380 50.633 79 39 0 14 92 10 88 6.56e-19 81.3
MS.gene70138.t1 AT5G61420 71.429 49 14 0 81 129 2 50 7.10e-19 85.5
MS.gene70138.t1 AT5G40430 36.036 111 69 2 4 114 44 152 1.02e-17 81.6
MS.gene70138.t1 AT1G22640 76.190 42 10 0 88 129 16 57 1.30e-16 77.0
MS.gene70138.t1 AT2G37630 41.667 96 54 1 17 110 7 102 2.74e-16 79.0
MS.gene70138.t1 AT5G39700 37.000 100 62 1 15 114 57 155 5.16e-16 75.5
MS.gene70138.t1 AT2G02820 38.384 99 60 1 17 115 33 130 6.19e-16 78.6
MS.gene70138.t1 AT2G02820 38.384 99 60 1 17 115 33 130 7.93e-16 78.2
MS.gene70138.t1 AT2G02820 38.384 99 60 1 17 115 33 130 1.99e-15 76.3
MS.gene70138.t1 AT5G59780 63.043 46 17 0 70 115 1 46 3.41e-15 72.8
MS.gene70138.t1 AT3G46130 56.140 57 23 1 70 124 1 57 3.79e-15 73.2
MS.gene70138.t1 AT4G25560 67.442 43 14 0 73 115 5 47 4.01e-15 73.6
MS.gene70138.t1 AT4G28110 68.293 41 13 0 88 128 4 44 7.46e-15 72.4
MS.gene70138.t1 AT1G14350 37.374 99 61 1 17 115 28 125 9.22e-15 75.1
MS.gene70138.t1 AT1G14350 37.374 99 61 1 17 115 28 125 9.22e-15 75.1
MS.gene70138.t1 AT5G15310 40.777 103 53 3 88 185 9 108 4.76e-14 71.2
MS.gene70138.t1 AT3G28910 52.830 53 23 1 77 129 1 51 6.67e-13 67.8
MS.gene70138.t1 AT1G74650 65.000 40 14 0 77 116 1 40 2.83e-12 66.2
MS.gene70138.t1 AT1G74430 47.368 57 30 0 77 133 8 64 2.96e-12 65.1
MS.gene70138.t1 AT3G18100 36.792 106 61 2 12 117 544 643 6.45e-12 67.0
MS.gene70138.t1 AT3G18100 31.757 148 87 4 12 159 383 516 7.30e-12 66.6
MS.gene70138.t1 AT3G18100 31.757 148 87 4 12 159 496 629 7.52e-12 66.6
MS.gene70138.t1 AT5G14340 54.348 46 21 0 88 133 10 55 7.59e-12 63.5
MS.gene70138.t1 AT3G18100 31.973 147 86 4 12 158 331 463 9.87e-12 66.2

Find 78 sgRNAs with CRISPR-Local

Find 102 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGTCGTCAAATATCTTT+AGG 0.182062 4.1:-7395863 MS.gene70138:CDS
GATCTCATTGTCTGTTCTTC+CGG 0.221330 4.1:+7396351 None:intergenic
ATCTCATTGTCTGTTCTTCC+GGG 0.278170 4.1:+7396352 None:intergenic
TAATATATACCTGCGGCTTT+AGG 0.298964 4.1:+7396833 None:intergenic
AATCAACTTGGAACTTTCAT+TGG 0.322311 4.1:-7395930 MS.gene70138:CDS
GTTGTTTGATGTAGTTAATA+AGG 0.342784 4.1:+7396882 None:intergenic
TTGAGTGGCTGATGTGTTGT+AGG 0.350899 4.1:+7396274 None:intergenic
AACAACAAGGTGAAGGTTGC+TGG 0.363863 4.1:-7396865 MS.gene70138:CDS
AATGAAAGTTCCAAGTTGAT+TGG 0.369039 4.1:+7395932 None:intergenic
TTTGTCGTCAAATATCTTTA+GGG 0.370282 4.1:-7395862 MS.gene70138:CDS
GGCGCCGCTGCCGCTTCAGC+CGG 0.372168 4.1:-7396241 MS.gene70138:CDS
ACAATGAGATCAAGAACTAT+TGG 0.386834 4.1:-7396339 MS.gene70138:CDS
AAGGCGTTCATCTTCTTCCT+TGG 0.409969 4.1:+7396901 None:intergenic
GGCTGAAGCGGCAGCGGCGC+CGG 0.415460 4.1:+7396243 None:intergenic
AAGTTTCCACGTTTAAGATC+AGG 0.434602 4.1:+7396653 None:intergenic
AGAAGCTGCTTCTCCTTCAA+TGG 0.441772 4.1:-7396191 MS.gene70138:CDS
AGTACTGCTCTCGTTGGTTG+AGG 0.444995 4.1:+7396132 None:intergenic
TTCCCGACGCCGGTGGTAGC+AGG 0.460111 4.1:+7395749 None:intergenic
TCTTAATCTTGTTGTGGTGG+TGG 0.469641 4.1:+7396095 None:intergenic
GTTGCAACTGATTCTGTCCA+TGG 0.469860 4.1:-7396022 MS.gene70138:CDS
ACGCCGGTGGTAGCAGGTGG+TGG 0.472661 4.1:+7395755 None:intergenic
CAAATATCTTTAGGGTTACA+TGG 0.477003 4.1:-7395854 MS.gene70138:CDS
GCTACCACCGGCGTCGGGAA+TGG 0.480018 4.1:-7395746 MS.gene70138:CDS
TTATTATTAACAACCATTGA+AGG 0.483862 4.1:+7396178 None:intergenic
AGCGGCAGCGGCGCCGGAGA+GGG 0.484893 4.1:+7396249 None:intergenic
CACCTGCTACCACCGGCGTC+GGG 0.491522 4.1:-7395751 MS.gene70138:CDS
TCAGTAATTTCAGTGGCTCT+CGG 0.500245 4.1:-7396057 MS.gene70138:CDS
TGCAGAGGTGGTTGTTGCTG+AGG 0.503317 4.1:+7396213 None:intergenic
AGTACCGGCTGAAGCGGCAG+CGG 0.515809 4.1:+7396237 None:intergenic
CACTCTTAATCTTGTTGTGG+TGG 0.527882 4.1:+7396092 None:intergenic
CAGCCACTCAAAACCCTCTC+CGG 0.529029 4.1:-7396262 MS.gene70138:CDS
AGTTCCAAGTTGATTGGAGG+AGG 0.529728 4.1:+7395938 None:intergenic
GAAAGTTCCAAGTTGATTGG+AGG 0.531148 4.1:+7395935 None:intergenic
TGAGGGTACTACAGGTAATA+CGG 0.532096 4.1:+7396150 None:intergenic
AGAAGCAGCTTCTGCAGAGG+TGG 0.535240 4.1:+7396201 None:intergenic
TATCATTAGCCTCCACGCTA+TGG 0.539507 4.1:-7396609 MS.gene70138:CDS
GTACTGCTCTCGTTGGTTGA+GGG 0.539997 4.1:+7396133 None:intergenic
CAATCAAAACTTGACAATCC+CGG 0.540131 4.1:+7395703 None:intergenic
TATTGCAGCAACAAGGTTGG+TGG 0.541765 4.1:+7395825 None:intergenic
TCGTTGGTTGAGGGTACTAC+AGG 0.542515 4.1:+7396142 None:intergenic
AAGCGGCAGCGGCGCCGGAG+AGG 0.551698 4.1:+7396248 None:intergenic
AACACACAAACAAAGGTGCT+TGG 0.551791 4.1:-7396925 MS.gene70138:CDS
CGTTCTCTTCCTAAAGCCGC+AGG 0.552268 4.1:-7396842 MS.gene70138:intron
ATTAGCCTCCACGCTATGGT+TGG 0.553340 4.1:-7396605 MS.gene70138:CDS
CTGTGGCTGTTGAGAGGGAG+AGG 0.555159 4.1:+7395901 None:intergenic
CCACCTGCTACCACCGGCGT+CGG 0.562507 4.1:-7395752 MS.gene70138:CDS
AACACAGGCTTGGCAAGATG+TGG 0.575098 4.1:-7396713 MS.gene70138:intron
AAACTTGACAATCCCGGCCC+CGG 0.577725 4.1:+7395709 None:intergenic
TGAGGAAGTACCGGCTGAAG+CGG 0.577777 4.1:+7396231 None:intergenic
TATTATTGCAGCAACAAGGT+TGG 0.582196 4.1:+7395822 None:intergenic
ACTCACTCTTAATCTTGTTG+TGG 0.587928 4.1:+7396089 None:intergenic
AAACAAAGGTGCTTGGTCCA+AGG 0.588189 4.1:-7396918 MS.gene70138:CDS
TTATCCTCCTCCAATCAACT+TGG 0.588353 4.1:-7395942 MS.gene70138:CDS
CAGTTATTCAGTAATTTCAG+TGG 0.590300 4.1:-7396064 MS.gene70138:CDS
GCTCCACCACCTGCTACCAC+CGG 0.597086 4.1:-7395758 MS.gene70138:CDS
CTCAGACCTGATCTTAAACG+TGG 0.598711 4.1:-7396659 MS.gene70138:CDS
AAACGCAAACTCTATAGCCG+TGG 0.599125 4.1:-7396304 MS.gene70138:CDS
GAAGTTGAAACACCAACGAT+AGG 0.603237 4.1:+7395794 None:intergenic
GGTTGTTGCTGAGGAAGTAC+CGG 0.604216 4.1:+7396222 None:intergenic
TACATCAAACAACAAGGTGA+AGG 0.620127 4.1:-7396872 MS.gene70138:CDS
AGGAGAAGCAGCTTCTGCAG+AGG 0.621236 4.1:+7396198 None:intergenic
ATGGTATTATTGCAGCAACA+AGG 0.622111 4.1:+7395818 None:intergenic
ACTTGTTTCCAACCATAGCG+TGG 0.623181 4.1:+7396597 None:intergenic
TAGCAGTGGTGTTACCGTTG+AGG 0.625555 4.1:-7395972 MS.gene70138:CDS
CCGACGCCGGTGGTAGCAGG+TGG 0.625901 4.1:+7395752 None:intergenic
GCTACTAGTACTGCTCTCGT+TGG 0.626573 4.1:+7396126 None:intergenic
TCAGTTTCAAACAGTAGCAG+TGG 0.628636 4.1:-7395986 MS.gene70138:CDS
AATAATACCATGCCTATCGT+TGG 0.630120 4.1:-7395806 MS.gene70138:CDS
CTGATTCTTCGACACCACCA+TGG 0.637845 4.1:+7396005 None:intergenic
AGGATAAGCTATATCCTCAA+CGG 0.643736 4.1:+7395958 None:intergenic
AAAACCATTCCCGACGCCGG+TGG 0.648900 4.1:+7395742 None:intergenic
GTGTTGTAGGATCAATTCCA+CGG 0.654495 4.1:+7396287 None:intergenic
TGAAACACCAACGATAGGCA+TGG 0.666214 4.1:+7395799 None:intergenic
ACAGCAAGGAGATCTACCCA+TGG 0.704613 4.1:+7396955 None:intergenic
GCAACTGATTCTGTCCATGG+TGG 0.713175 4.1:-7396019 MS.gene70138:CDS
ATTAACTACATCAAACAACA+AGG 0.716458 4.1:-7396878 MS.gene70138:CDS
ACGTGGAAACTTCACTCACG+AGG 0.718536 4.1:-7396642 MS.gene70138:CDS
TGTTTCCAACCATAGCGTGG+AGG 0.719128 4.1:+7396600 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAGCAAAATGAATAAA+CGG + chr4.1:7395905-7395924 None:intergenic 15.0%
!! ATAATATTAATATATACCTG+CGG + chr4.1:7395836-7395855 None:intergenic 15.0%
!!! ATTTGATAGAATATGATTTT+TGG + chr4.1:7396153-7396172 None:intergenic 15.0%
!!! TTTGATAGAATATGATTTTT+GGG + chr4.1:7396152-7396171 None:intergenic 15.0%
!! TTATTATTAACAACCATTGA+AGG + chr4.1:7396484-7396503 None:intergenic 20.0%
!!! AATGGTTTTTTCAAATTTTC+CGG - chr4.1:7396931-7396950 MS.gene70138:CDS 20.0%
! ATGATTACAGAATTACATGA+AGG + chr4.1:7396227-7396246 None:intergenic 25.0%
! ATTAACTACATCAAACAACA+AGG - chr4.1:7395781-7395800 MS.gene70138:CDS 25.0%
! GTTGTTTGATGTAGTTAATA+AGG + chr4.1:7395780-7395799 None:intergenic 25.0%
! TTTGTCGTCAAATATCTTTA+GGG - chr4.1:7396797-7396816 MS.gene70138:intron 25.0%
!!! AAAATGAATAAACGGATTGT+GGG + chr4.1:7395897-7395916 None:intergenic 25.0%
!!! ATGGTTTTTTCAAATTTTCC+GGG - chr4.1:7396932-7396951 MS.gene70138:CDS 25.0%
!!! GATTATGTTTTGTTTTCAGA+TGG - chr4.1:7396263-7396282 MS.gene70138:CDS 25.0%
AATCAACTTGGAACTTTCAT+TGG - chr4.1:7396729-7396748 MS.gene70138:intron 30.0%
ACAATGAGATCAAGAACTAT+TGG - chr4.1:7396320-7396339 MS.gene70138:CDS 30.0%
CAGTTATTCAGTAATTTCAG+TGG - chr4.1:7396595-7396614 MS.gene70138:intron 30.0%
CTTTGTCGTCAAATATCTTT+AGG - chr4.1:7396796-7396815 MS.gene70138:intron 30.0%
GAAAAACAACACACAAACAA+AGG - chr4.1:7395727-7395746 MS.gene70138:CDS 30.0%
!! AATGAAAGTTCCAAGTTGAT+TGG + chr4.1:7396730-7396749 None:intergenic 30.0%
!! CAAAATGAATAAACGGATTG+TGG + chr4.1:7395898-7395917 None:intergenic 30.0%
!! CAAATATCTTTAGGGTTACA+TGG - chr4.1:7396805-7396824 MS.gene70138:intron 30.0%
!!! TGGTTTTTTCAAATTTTCCG+GGG - chr4.1:7396933-7396952 MS.gene70138:CDS 30.0%
AATAATACCATGCCTATCGT+TGG - chr4.1:7396853-7396872 MS.gene70138:CDS 35.0%
ACTCACTCTTAATCTTGTTG+TGG + chr4.1:7396573-7396592 None:intergenic 35.0%
AGGATAAGCTATATCCTCAA+CGG + chr4.1:7396704-7396723 None:intergenic 35.0%
ATGCATGTTTACTACAACAC+AGG - chr4.1:7395931-7395950 MS.gene70138:CDS 35.0%
ATGGTATTATTGCAGCAACA+AGG + chr4.1:7396844-7396863 None:intergenic 35.0%
GAAAAAGCTGTAGATTGAGA+TGG - chr4.1:7395968-7395987 MS.gene70138:CDS 35.0%
TAATATATACCTGCGGCTTT+AGG + chr4.1:7395829-7395848 None:intergenic 35.0%
TACATCAAACAACAAGGTGA+AGG - chr4.1:7395787-7395806 MS.gene70138:CDS 35.0%
TATTATTGCAGCAACAAGGT+TGG + chr4.1:7396840-7396859 None:intergenic 35.0%
! AAGTTTCCACGTTTAAGATC+AGG + chr4.1:7396009-7396028 None:intergenic 35.0%
ATCTCATTGTCTGTTCTTCC+GGG + chr4.1:7396310-7396329 None:intergenic 40.0%
CAGATTGCTCAAAAATTGCC+CGG - chr4.1:7396289-7396308 MS.gene70138:CDS 40.0%
GAAGTTGAAACACCAACGAT+AGG + chr4.1:7396868-7396887 None:intergenic 40.0%
GATCTCATTGTCTGTTCTTC+CGG + chr4.1:7396311-7396330 None:intergenic 40.0%
GTGTTGTAGGATCAATTCCA+CGG + chr4.1:7396375-7396394 None:intergenic 40.0%
TCAGTAATTTCAGTGGCTCT+CGG - chr4.1:7396602-7396621 MS.gene70138:CDS 40.0%
TCAGTTTCAAACAGTAGCAG+TGG - chr4.1:7396673-7396692 MS.gene70138:CDS 40.0%
TGTTTACTACAACACAGGCT+TGG - chr4.1:7395936-7395955 MS.gene70138:CDS 40.0%
TTATCCTCCTCCAATCAACT+TGG - chr4.1:7396717-7396736 MS.gene70138:intron 40.0%
! AGACACAAAGCTTTTTGCTG+TGG + chr4.1:7396778-7396797 None:intergenic 40.0%
! CACTCTTAATCTTGTTGTGG+TGG + chr4.1:7396570-7396589 None:intergenic 40.0%
! TCTTAATCTTGTTGTGGTGG+TGG + chr4.1:7396567-7396586 None:intergenic 40.0%
!! AACACACAAACAAAGGTGCT+TGG - chr4.1:7395734-7395753 MS.gene70138:CDS 40.0%
!! ATGAATAAACGGATTGTGGG+TGG + chr4.1:7395894-7395913 None:intergenic 40.0%
!! GAAAGTTCCAAGTTGATTGG+AGG + chr4.1:7396727-7396746 None:intergenic 40.0%
!! TGAATAAACGGATTGTGGGT+GGG + chr4.1:7395893-7395912 None:intergenic 40.0%
!! TGAGGGTACTACAGGTAATA+CGG + chr4.1:7396512-7396531 None:intergenic 40.0%
!! TTTTTCAAATTTTCCGGGGC+CGG - chr4.1:7396937-7396956 MS.gene70138:CDS 40.0%
!!! GTGTGTTGTTTTTCACAGCA+AGG + chr4.1:7395721-7395740 None:intergenic 40.0%
AAACGCAAACTCTATAGCCG+TGG - chr4.1:7396355-7396374 MS.gene70138:CDS 45.0%
AACAACAAGGTGAAGGTTGC+TGG - chr4.1:7395794-7395813 MS.gene70138:CDS 45.0%
ACTTGTTTCCAACCATAGCG+TGG + chr4.1:7396065-7396084 None:intergenic 45.0%
AGAAGCTGCTTCTCCTTCAA+TGG - chr4.1:7396468-7396487 MS.gene70138:intron 45.0%
CTCAGACCTGATCTTAAACG+TGG - chr4.1:7396000-7396019 MS.gene70138:CDS 45.0%
TATTGCAGCAACAAGGTTGG+TGG + chr4.1:7396837-7396856 None:intergenic 45.0%
TGAAACACCAACGATAGGCA+TGG + chr4.1:7396863-7396882 None:intergenic 45.0%
TTGAGTGGCTGATGTGTTGT+AGG + chr4.1:7396388-7396407 None:intergenic 45.0%
! AAGGCGTTCATCTTCTTCCT+TGG + chr4.1:7395761-7395780 None:intergenic 45.0%
! GTTGCAACTGATTCTGTCCA+TGG - chr4.1:7396637-7396656 MS.gene70138:CDS 45.0%
! TATCATTAGCCTCCACGCTA+TGG - chr4.1:7396050-7396069 MS.gene70138:CDS 45.0%
! TTTTCAAATTTTCCGGGGCC+GGG - chr4.1:7396938-7396957 MS.gene70138:CDS 45.0%
!! AAACAAAGGTGCTTGGTCCA+AGG - chr4.1:7395741-7395760 MS.gene70138:CDS 45.0%
!! AGTTCCAAGTTGATTGGAGG+AGG + chr4.1:7396724-7396743 None:intergenic 45.0%
!! TTTTGCTGTGGCTGTTGAGA+GGG + chr4.1:7396766-7396785 None:intergenic 45.0%
!! TTTTTGCTGTGGCTGTTGAG+AGG + chr4.1:7396767-7396786 None:intergenic 45.0%
AACACAGGCTTGGCAAGATG+TGG - chr4.1:7395946-7395965 MS.gene70138:CDS 50.0%
ACGTGGAAACTTCACTCACG+AGG - chr4.1:7396017-7396036 MS.gene70138:CDS 50.0%
CTGATTCTTCGACACCACCA+TGG + chr4.1:7396657-7396676 None:intergenic 50.0%
GAAAAAACCATTCCCGACGC+CGG + chr4.1:7396923-7396942 None:intergenic 50.0%
GCTACTAGTACTGCTCTCGT+TGG + chr4.1:7396536-7396555 None:intergenic 50.0%
TGTTTCCAACCATAGCGTGG+AGG + chr4.1:7396062-7396081 None:intergenic 50.0%
! AGTACTGCTCTCGTTGGTTG+AGG + chr4.1:7396530-7396549 None:intergenic 50.0%
! ATTAGCCTCCACGCTATGGT+TGG - chr4.1:7396054-7396073 MS.gene70138:CDS 50.0%
! GCAACTGATTCTGTCCATGG+TGG - chr4.1:7396640-7396659 MS.gene70138:CDS 50.0%
! GGTTGTTGCTGAGGAAGTAC+CGG + chr4.1:7396440-7396459 None:intergenic 50.0%
! GTACTGCTCTCGTTGGTTGA+GGG + chr4.1:7396529-7396548 None:intergenic 50.0%
!! TAGCAGTGGTGTTACCGTTG+AGG - chr4.1:7396687-7396706 MS.gene70138:CDS 50.0%
!! TCGTTGGTTGAGGGTACTAC+AGG + chr4.1:7396520-7396539 None:intergenic 50.0%
AAACTTGACAATCCCGGCCC+CGG + chr4.1:7396953-7396972 None:intergenic 55.0%
AGAAGCAGCTTCTGCAGAGG+TGG + chr4.1:7396461-7396480 None:intergenic 55.0%
AGGAGAAGCAGCTTCTGCAG+AGG + chr4.1:7396464-7396483 None:intergenic 55.0%
CAGCCACTCAAAACCCTCTC+CGG - chr4.1:7396397-7396416 MS.gene70138:intron 55.0%
CGTTCTCTTCCTAAAGCCGC+AGG - chr4.1:7395817-7395836 MS.gene70138:CDS 55.0%
TGCAGAGGTGGTTGTTGCTG+AGG + chr4.1:7396449-7396468 None:intergenic 55.0%
!! TGAGGAAGTACCGGCTGAAG+CGG + chr4.1:7396431-7396450 None:intergenic 55.0%
AAAACCATTCCCGACGCCGG+TGG + chr4.1:7396920-7396939 None:intergenic 60.0%
CTGTGGCTGTTGAGAGGGAG+AGG + chr4.1:7396761-7396780 None:intergenic 60.0%
GCTCCACCACCTGCTACCAC+CGG - chr4.1:7396901-7396920 MS.gene70138:CDS 65.0%
!! AGTACCGGCTGAAGCGGCAG+CGG + chr4.1:7396425-7396444 None:intergenic 65.0%
!!! GCGCCGGAGAGGGTTTTGAG+TGG + chr4.1:7396403-7396422 None:intergenic 65.0%
ACGCCGGTGGTAGCAGGTGG+TGG + chr4.1:7396907-7396926 None:intergenic 70.0%
CACCTGCTACCACCGGCGTC+GGG - chr4.1:7396908-7396927 MS.gene70138:CDS 70.0%
CCACCTGCTACCACCGGCGT+CGG - chr4.1:7396907-7396926 MS.gene70138:CDS 70.0%
TTCCCGACGCCGGTGGTAGC+AGG + chr4.1:7396913-7396932 None:intergenic 70.0%
! GCTACCACCGGCGTCGGGAA+TGG - chr4.1:7396913-7396932 MS.gene70138:CDS 70.0%
CCGACGCCGGTGGTAGCAGG+TGG + chr4.1:7396910-7396929 None:intergenic 75.0%
! GGCTGAAGCGGCAGCGGCGC+CGG + chr4.1:7396419-7396438 None:intergenic 80.0%
!! AAGCGGCAGCGGCGCCGGAG+AGG + chr4.1:7396414-7396433 None:intergenic 80.0%
!! AGCGGCAGCGGCGCCGGAGA+GGG + chr4.1:7396413-7396432 None:intergenic 80.0%
!! GGCGCCGCTGCCGCTTCAGC+CGG - chr4.1:7396418-7396437 MS.gene70138:intron 80.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 7395706 7396975 7395706 ID=MS.gene70138
chr4.1 mRNA 7395706 7396975 7395706 ID=MS.gene70138.t1;Parent=MS.gene70138
chr4.1 exon 7396843 7396975 7396843 ID=MS.gene70138.t1.exon1;Parent=MS.gene70138.t1
chr4.1 CDS 7396843 7396975 7396843 ID=cds.MS.gene70138.t1;Parent=MS.gene70138.t1
chr4.1 exon 7396599 7396728 7396599 ID=MS.gene70138.t1.exon2;Parent=MS.gene70138.t1
chr4.1 CDS 7396599 7396728 7396599 ID=cds.MS.gene70138.t1;Parent=MS.gene70138.t1
chr4.1 exon 7395706 7396399 7395706 ID=MS.gene70138.t1.exon3;Parent=MS.gene70138.t1
chr4.1 CDS 7395706 7396399 7395706 ID=cds.MS.gene70138.t1;Parent=MS.gene70138.t1
Gene Sequence

>MS.gene70138

ATGGGTAGATCTCCTTGCTGTGAAAAACAACACACAAACAAAGGTGCTTGGTCCAAGGAAGAAGATGAACGCCTTATTAACTACATCAAACAACAAGGTGAAGGTTGCTGGCGTTCTCTTCCTAAAGCCGCAGGTATATATTAATATTATTACACGTTTGTTTAACTATTTCATTTCATCATTTCCCACCCACAATCCGTTTATTCATTTTGCTTAATTATTTTTATGCATGTTTACTACAACACAGGCTTGGCAAGATGTGGAAAAAGCTGTAGATTGAGATGGATCAATTATCTCAGACCTGATCTTAAACGTGGAAACTTCACTCACGAGGAAGATGAACTTATCATTAGCCTCCACGCTATGGTTGGAAACAAGTATGTATATATATTCTTTCTCAAATTAAATTTATTTTTCTCGTTCATTTTCATCTTTCATATTTTCCCAAAAATCATATTCTATCAAATACTATAATTCATGATTTCTTGTAGTTAAGTTTTTATATATATATATGTACTCCTTCATGTAATTCTGTAATCATTTACTTGTTATTAATTGATTATGTTTTGTTTTCAGATGGTCTCAGATTGCTCAAAAATTGCCCGGAAGAACAGACAATGAGATCAAGAACTATTGGAACACTCACATAAAACGCAAACTCTATAGCCGTGGAATTGATCCTACAACACATCAGCCACTCAAAACCCTCTCCGGCGCCGCTGCCGCTTCAGCCGGTACTTCCTCAGCAACAACCACCTCTGCAGAAGCTGCTTCTCCTTCAATGGTTGTTAATAATAATTCATCCGTATTACCTGTAGTACCCTCAACCAACGAGAGCAGTACTAGTAGCAGCATGAGCCACCACCACAACAAGATTAAGAGTGAGTTTCAGTTATTCAGTAATTTCAGTGGCTCTCGGCTTAAAAAGTTTGTTGCAACTGATTCTGTCCATGGTGGTGTCGAAGAATCAGTTTCAAACAGTAGCAGTGGTGTTACCGTTGAGGATATAGCTTATCCTCCTCCAATCAACTTGGAACTTTCATTGGCTATATCCTCTCCCTCTCAACAGCCACAGCAAAAAGCTTTGTGTCTTTGTCGTCAAATATCTTTAGGGTTACATGGTAGTAGCCACCAACCTTGTTGCTGCAATAATACCATGCCTATCGTTGGTGTTTCAACTTCTTATGCTGTTACTGCTCCACCACCTGCTACCACCGGCGTCGGGAATGGTTTTTTCAAATTTTCCGGGGCCGGGATTGTCAAGTTTTGA
Protein sequence

>MS.gene70138.t1

MGRSPCCEKQHTNKGAWSKEEDERLINYIKQQGEGCWRSLPKAAGLARCGKSCRLRWINYLRPDLKRGNFTHEEDELIISLHAMVGNKWSQIAQKLPGRTDNEIKNYWNTHIKRKLYSRGIDPTTHQPLKTLSGAAAASAGTSSATTTSAEAASPSMVVNNNSSVLPVVPSTNESSTSSSMSHHHNKIKSEFQLFSNFSGSRLKKFVATDSVHGGVEESVSNSSSGVTVEDIAYPPPINLELSLAISSPSQQPQQKALCLCRQISLGLHGSSHQPCCCNNTMPIVGVSTSYAVTAPPPATTGVGNGFFKFSGAGIVKF