Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70181.t1 | XP_013446890.1 | 96.7 | 301 | 8 | 1 | 1 | 301 | 1 | 299 | 7.80E-130 | 473.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70181.t1 | Q8VWK4 | 56.8 | 250 | 97 | 6 | 1 | 245 | 1 | 244 | 7.6e-65 | 248.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70181.t1 | A0A072TU28 | 96.7 | 301 | 8 | 1 | 1 | 301 | 1 | 299 | 5.7e-130 | 473.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene70181.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70181.t1 | MTR_8g494240 | 96.678 | 301 | 8 | 1 | 1 | 301 | 1 | 299 | 0.0 | 583 |
| MS.gene70181.t1 | MTR_8g494240 | 96.309 | 298 | 9 | 1 | 1 | 298 | 1 | 296 | 0.0 | 576 |
| MS.gene70181.t1 | MTR_8g494240 | 96.633 | 297 | 8 | 1 | 1 | 297 | 1 | 295 | 0.0 | 576 |
| MS.gene70181.t1 | MTR_8g494240 | 51.786 | 112 | 22 | 4 | 3 | 114 | 304 | 383 | 1.95e-19 | 88.2 |
| MS.gene70181.t1 | MTR_2g031870 | 76.689 | 296 | 65 | 2 | 1 | 294 | 1 | 294 | 2.46e-132 | 377 |
| MS.gene70181.t1 | MTR_8g092810 | 67.717 | 254 | 69 | 3 | 1 | 243 | 1 | 252 | 1.44e-111 | 331 |
| MS.gene70181.t1 | MTR_2g031870 | 69.257 | 296 | 61 | 3 | 1 | 294 | 1 | 268 | 2.46e-107 | 313 |
| MS.gene70181.t1 | MTR_0095s0040 | 94.268 | 157 | 3 | 2 | 1 | 153 | 1 | 155 | 7.06e-103 | 301 |
| MS.gene70181.t1 | MTR_5g015340 | 52.560 | 293 | 134 | 5 | 1 | 292 | 1 | 289 | 6.82e-65 | 206 |
| MS.gene70181.t1 | MTR_5g015340 | 52.560 | 293 | 134 | 5 | 1 | 292 | 1 | 289 | 6.82e-65 | 206 |
| MS.gene70181.t1 | MTR_4g097130 | 49.191 | 309 | 135 | 7 | 1 | 292 | 1 | 304 | 2.33e-64 | 205 |
| MS.gene70181.t1 | MTR_4g097130 | 49.191 | 309 | 135 | 7 | 1 | 292 | 1 | 304 | 2.67e-64 | 205 |
| MS.gene70181.t1 | MTR_5g015340 | 52.560 | 293 | 134 | 5 | 1 | 292 | 1 | 289 | 1.54e-63 | 205 |
| MS.gene70181.t1 | MTR_4g097130 | 47.452 | 314 | 138 | 5 | 1 | 292 | 1 | 309 | 4.84e-63 | 202 |
| MS.gene70181.t1 | MTR_1g088180 | 62.295 | 122 | 43 | 2 | 125 | 246 | 295 | 413 | 7.11e-41 | 147 |
| MS.gene70181.t1 | MTR_8g018410 | 40.314 | 191 | 103 | 4 | 1 | 187 | 1 | 184 | 4.20e-34 | 125 |
| MS.gene70181.t1 | MTR_1g041765 | 64.368 | 87 | 27 | 2 | 1 | 87 | 1 | 83 | 8.48e-30 | 112 |
| MS.gene70181.t1 | MTR_2g099610 | 34.545 | 220 | 103 | 5 | 1 | 190 | 1 | 209 | 1.23e-28 | 112 |
| MS.gene70181.t1 | MTR_2g031880 | 54.464 | 112 | 35 | 5 | 61 | 168 | 3 | 102 | 2.98e-21 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70181.t1 | AT1G49950 | 60.328 | 305 | 108 | 7 | 1 | 299 | 1 | 298 | 1.39e-84 | 256 |
| MS.gene70181.t1 | AT1G49950 | 60.328 | 305 | 108 | 7 | 1 | 299 | 1 | 298 | 1.39e-84 | 256 |
| MS.gene70181.t1 | AT1G49950 | 60.328 | 305 | 108 | 7 | 1 | 299 | 1 | 298 | 1.39e-84 | 256 |
| MS.gene70181.t1 | AT5G67580 | 49.495 | 297 | 141 | 5 | 1 | 292 | 1 | 293 | 4.15e-57 | 186 |
| MS.gene70181.t1 | AT5G67580 | 49.495 | 297 | 141 | 5 | 1 | 292 | 1 | 293 | 4.15e-57 | 186 |
| MS.gene70181.t1 | AT3G49850 | 48.185 | 303 | 142 | 6 | 1 | 297 | 1 | 294 | 4.60e-56 | 183 |
| MS.gene70181.t1 | AT3G49850 | 48.185 | 303 | 142 | 6 | 1 | 297 | 1 | 294 | 4.60e-56 | 183 |
| MS.gene70181.t1 | AT1G72740 | 36.059 | 269 | 152 | 5 | 1 | 269 | 1 | 249 | 1.37e-35 | 129 |
| MS.gene70181.t1 | AT1G72740 | 35.636 | 275 | 151 | 6 | 1 | 269 | 1 | 255 | 3.06e-33 | 124 |
| MS.gene70181.t1 | AT1G17520 | 36.869 | 198 | 108 | 4 | 1 | 187 | 1 | 192 | 1.84e-26 | 105 |
| MS.gene70181.t1 | AT1G17520 | 37.186 | 199 | 107 | 5 | 1 | 187 | 1 | 193 | 1.03e-25 | 103 |
| MS.gene70181.t1 | AT1G17520 | 38.021 | 192 | 102 | 4 | 1 | 181 | 1 | 186 | 1.19e-25 | 103 |
| MS.gene70181.t1 | AT1G17520 | 38.342 | 193 | 101 | 5 | 1 | 181 | 1 | 187 | 6.74e-25 | 101 |
| MS.gene70181.t1 | AT1G54260 | 47.826 | 69 | 36 | 0 | 124 | 192 | 6 | 74 | 8.59e-13 | 66.2 |
Find 87 sgRNAs with CRISPR-Local
Find 345 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACCCACCCATGTTATTAT+TGG | 0.233775 | 4.1:-7955173 | MS.gene70181:CDS |
| GAGCTCCAGGGAGAAGTCTA+AGG | 0.278068 | 4.1:-7958821 | MS.gene70181:CDS |
| ATGGCTATCACTGCCGTTAC+TGG | 0.296926 | 4.1:-7958748 | MS.gene70181:CDS |
| CAGATTAGATAACCTTATAT+TGG | 0.305916 | 4.1:-7957752 | MS.gene70181:CDS |
| GCAGAAAACCTCTATGAAAT+TGG | 0.307733 | 4.1:-7955143 | MS.gene70181:CDS |
| TGTGGTTTGGATAGGATAAA+TGG | 0.317432 | 4.1:-7958873 | MS.gene70181:intron |
| CCAAGCATGGGGTGGGAAAA+TGG | 0.324906 | 4.1:-7959077 | MS.gene70181:CDS |
| TAGATATAGCTTCCAATATA+AGG | 0.325779 | 4.1:+7957740 | None:intergenic |
| AGAGACATGCCGCACATTCC+TGG | 0.352882 | 4.1:-7958676 | MS.gene70181:CDS |
| AATTTGAGTGTGACGGGAAA+TGG | 0.361800 | 4.1:-7958847 | MS.gene70181:CDS |
| CGGGAAATGGATCGAGCTCC+AGG | 0.365659 | 4.1:-7958834 | MS.gene70181:CDS |
| AAATCTATCTCAGACTTTGT+AGG | 0.366127 | 4.1:+7955100 | None:intergenic |
| TCTGATGTCCATTTCTGCTT+AGG | 0.367914 | 4.1:+7959129 | None:intergenic |
| GAATCATCCGGTACCGAAAC+AGG | 0.369840 | 4.1:-7958782 | MS.gene70181:CDS |
| AGTCTGCTGGTGGCCGGTAT+TGG | 0.379118 | 4.1:+7956234 | None:intergenic |
| TTCCTGGTCCTGGTCCAAAA+AGG | 0.410764 | 4.1:-7958660 | MS.gene70181:intron |
| TTCAGGTGAAACGCAGGTAT+AGG | 0.416662 | 4.1:-7955231 | MS.gene70181:intron |
| AACAAGACACGATTAAATTC+AGG | 0.435715 | 4.1:+7959036 | None:intergenic |
| CTTCCTCTGTCTGAATATGC+AGG | 0.439039 | 4.1:+7955196 | None:intergenic |
| TGGGTGCTCCTAAGCAGAAA+TGG | 0.442291 | 4.1:-7959137 | MS.gene70181:CDS |
| GAAACAGGATGACAACTCTA+TGG | 0.446572 | 4.1:-7958767 | MS.gene70181:CDS |
| TTGTCATCCTGTTTCGGTAC+CGG | 0.459989 | 4.1:+7958775 | None:intergenic |
| ATAGAGTTGTCATCCTGTTT+CGG | 0.460910 | 4.1:+7958769 | None:intergenic |
| TGGAGAAATTTGAGTGTGAC+GGG | 0.461904 | 4.1:-7958853 | MS.gene70181:CDS |
| GAGGAAGCAGCTCTTAAAGC+TGG | 0.470003 | 4.1:-7959105 | MS.gene70181:CDS |
| CGCCATAGCAGAAGCTGAAG+AGG | 0.472911 | 4.1:-7954999 | MS.gene70181:CDS |
| CTCTTGAGACTTGAAGAGGC+TGG | 0.475264 | 4.1:+7958695 | None:intergenic |
| AACTATTGCTTCTTTCATAG+AGG | 0.478041 | 4.1:-7957686 | MS.gene70181:intron |
| TGCCTCTTCAGCTTCTGCTA+TGG | 0.491455 | 4.1:+7954997 | None:intergenic |
| CCTCCCTTCCAATAATAACA+TGG | 0.495257 | 4.1:+7955165 | None:intergenic |
| AGTCTAAGGGAGCAATCAAA+AGG | 0.496855 | 4.1:-7958807 | MS.gene70181:CDS |
| TTCCTCTGTCTGAATATGCA+GGG | 0.497922 | 4.1:+7955197 | None:intergenic |
| AATCTATCTCAGACTTTGTA+GGG | 0.500580 | 4.1:+7955101 | None:intergenic |
| AAACCTCTATGAAATTGGAC+AGG | 0.500951 | 4.1:-7955138 | MS.gene70181:CDS |
| AAGCTGGAGTTGCCAAGCAT+GGG | 0.503893 | 4.1:-7959089 | MS.gene70181:CDS |
| TGCTCCCTTAGACTTCTCCC+TGG | 0.506852 | 4.1:+7958816 | None:intergenic |
| ATGCCGCACATTCCTGGTCC+TGG | 0.511744 | 4.1:-7958670 | MS.gene70181:CDS |
| GATAGATTTAGAAATAGAAA+AGG | 0.512772 | 4.1:-7955086 | MS.gene70181:CDS |
| TCGCTCAAATGTCGATCTCA+AGG | 0.519219 | 4.1:-7959010 | MS.gene70181:intron |
| ATCCCTGTCCAATTTCATAG+AGG | 0.522008 | 4.1:+7955135 | None:intergenic |
| ATATCTAGCTTGAATGAGCT+TGG | 0.522209 | 4.1:-7957724 | MS.gene70181:CDS |
| AATCAAAAGGGTGAATCATC+CGG | 0.527127 | 4.1:-7958794 | MS.gene70181:CDS |
| ATCAACAATTTCATCATCAT+CGG | 0.527962 | 4.1:+7958720 | None:intergenic |
| AGCTGAAGAGGCAGCAAAGG+AGG | 0.528236 | 4.1:-7954987 | MS.gene70181:CDS |
| AAAATGGCGTACAATAATCA+AGG | 0.529843 | 4.1:-7959061 | MS.gene70181:CDS |
| ATGGAGAAATTTGAGTGTGA+CGG | 0.530825 | 4.1:-7958854 | MS.gene70181:CDS |
| ATCTAGCGGAAAACTGATCA+AGG | 0.531425 | 4.1:-7956174 | MS.gene70181:intron |
| AAAGCTGGAGTTGCCAAGCA+TGG | 0.532704 | 4.1:-7959090 | MS.gene70181:CDS |
| AGAAGCTGAAGAGGCAGCAA+AGG | 0.535223 | 4.1:-7954990 | MS.gene70181:CDS |
| CCACCCATGTTATTATTGGA+AGG | 0.535733 | 4.1:-7955169 | MS.gene70181:CDS |
| TCTTGAGACTTGAAGAGGCT+GGG | 0.541739 | 4.1:+7958696 | None:intergenic |
| CTTCACACTTCAATCAAGAC+GGG | 0.544296 | 4.1:+7954323 | None:intergenic |
| CTGTCTGAATATGCAGGGGT+AGG | 0.544633 | 4.1:+7955202 | None:intergenic |
| GGCAGCCTCTTGAGCAGACA+TGG | 0.544900 | 4.1:+7955057 | None:intergenic |
| AGAGGCAGCAAAGGAGGCAG+AGG | 0.547850 | 4.1:-7954981 | MS.gene70181:CDS |
| CTCTTCAGCTTCTGCTATGG+CGG | 0.551526 | 4.1:+7955000 | None:intergenic |
| GACTGCTCGAGCAGCATATG+CGG | 0.551764 | 4.1:+7955036 | None:intergenic |
| AAGGTCCATGTCTGCTCAAG+AGG | 0.553221 | 4.1:-7955062 | MS.gene70181:CDS |
| ATTTAGAAATAGAAAAGGTA+AGG | 0.556910 | 4.1:-7955081 | MS.gene70181:CDS |
| TGGAGTTGCCAAGCATGGGG+TGG | 0.557397 | 4.1:-7959085 | MS.gene70181:CDS |
| CACCCATGTTATTATTGGAA+GGG | 0.560560 | 4.1:-7955168 | MS.gene70181:CDS |
| GGAGTTGCCAAGCATGGGGT+GGG | 0.561098 | 4.1:-7959084 | MS.gene70181:CDS |
| CTAAAGTATCTTACATCTAG+CGG | 0.565433 | 4.1:-7956188 | MS.gene70181:CDS |
| TCTAGCTTGAATGAGCTTGG+TGG | 0.575119 | 4.1:-7957721 | MS.gene70181:CDS |
| CCTTCCAATAATAACATGGG+TGG | 0.576377 | 4.1:+7955169 | None:intergenic |
| TCTTCACACTTCAATCAAGA+CGG | 0.581316 | 4.1:+7954322 | None:intergenic |
| GTCTAAGGGAGCAATCAAAA+GGG | 0.586208 | 4.1:-7958806 | MS.gene70181:CDS |
| TCCTCTGTCTGAATATGCAG+GGG | 0.589128 | 4.1:+7955198 | None:intergenic |
| AGCTCCAGGGAGAAGTCTAA+GGG | 0.592466 | 4.1:-7958820 | MS.gene70181:CDS |
| AGCTGCAATGAAAACACTGA+AGG | 0.594087 | 4.1:-7954918 | MS.gene70181:CDS |
| CCATGTTATTATTGGAAGGG+AGG | 0.596204 | 4.1:-7955165 | MS.gene70181:CDS |
| ATGTCTCTTGAGACTTGAAG+AGG | 0.598346 | 4.1:+7958691 | None:intergenic |
| CTCCCTTCCAATAATAACAT+GGG | 0.599995 | 4.1:+7955166 | None:intergenic |
| ATCATCGGATGGACCAGTAA+CGG | 0.608006 | 4.1:+7958735 | None:intergenic |
| TTATATTTCAGGTGAAACGC+AGG | 0.613161 | 4.1:-7955237 | MS.gene70181:intron |
| ACAATTTCATCATCATCGGA+TGG | 0.613826 | 4.1:+7958724 | None:intergenic |
| GCTGCAATGAAAACACTGAA+GGG | 0.616290 | 4.1:-7954917 | MS.gene70181:CDS |
| CTTCCAATAATAACATGGGT+GGG | 0.618304 | 4.1:+7955170 | None:intergenic |
| GCAGAAATGGACATCAGAAG+AGG | 0.618364 | 4.1:-7959124 | MS.gene70181:CDS |
| GGACCAGGACCAGGAATGTG+CGG | 0.620041 | 4.1:+7958667 | None:intergenic |
| CTGCAATGAAAACACTGAAG+GGG | 0.632379 | 4.1:-7954916 | MS.gene70181:CDS |
| AGCTGGAGTTGCCAAGCATG+GGG | 0.639684 | 4.1:-7959088 | MS.gene70181:CDS |
| GCCAAGACTTACCGTCTCTG+AGG | 0.642080 | 4.1:+7954886 | None:intergenic |
| GGGGAGAAACACCTCAGAGA+CGG | 0.644348 | 4.1:-7954897 | MS.gene70181:intron |
| AACCTCTATGAAATTGGACA+GGG | 0.650684 | 4.1:-7955137 | MS.gene70181:CDS |
| GGGAAATGGATCGAGCTCCA+GGG | 0.651429 | 4.1:-7958833 | MS.gene70181:CDS |
| ACCCCTGCATATTCAGACAG+AGG | 0.679893 | 4.1:-7955199 | MS.gene70181:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTAACCAAAAAAAATA+TGG | + | chr4.1:7954858-7954877 | None:intergenic | 10.0% |
| !! | ATTACAATTTATATAACAAA+TGG | + | chr4.1:7955512-7955531 | None:intergenic | 10.0% |
| !! | TATTTAACCAAAAAAAATAT+GGG | + | chr4.1:7954857-7954876 | None:intergenic | 10.0% |
| !! | TTAAAGAAAAAATAATACTT+TGG | + | chr4.1:7956628-7956647 | None:intergenic | 10.0% |
| !! | TTTACATATGATATTTATTT+AGG | - | chr4.1:7958895-7958914 | MS.gene70181:intron | 10.0% |
| !!! | ATATTTTTTTTGGTTAAATA+TGG | - | chr4.1:7954857-7954876 | MS.gene70181:intron | 10.0% |
| !! | AAAGTATATTGAATTAATGT+TGG | - | chr4.1:7954547-7954566 | MS.gene70181:intron | 15.0% |
| !! | AAATTTGTATAATGTAAACA+TGG | + | chr4.1:7955568-7955587 | None:intergenic | 15.0% |
| !! | ACAAATATATATATTCTACA+AGG | + | chr4.1:7957946-7957965 | None:intergenic | 15.0% |
| !! | ATGTAGAAATTACATTATAT+TGG | - | chr4.1:7957088-7957107 | MS.gene70181:intron | 15.0% |
| !! | CAAATATATATATTCTACAA+GGG | + | chr4.1:7957945-7957964 | None:intergenic | 15.0% |
| !! | TGTTATAGTATTACAATAAA+AGG | + | chr4.1:7958618-7958637 | None:intergenic | 15.0% |
| !!! | AAAGATTAATGTTTTTATGT+TGG | + | chr4.1:7957978-7957997 | None:intergenic | 15.0% |
| !!! | ATTACAATTCAAATCATTTT+AGG | + | chr4.1:7959001-7959020 | None:intergenic | 15.0% |
| !!! | CATTTTGAAACAATTTTTTT+TGG | + | chr4.1:7956524-7956543 | None:intergenic | 15.0% |
| !!! | TTTTTTGTTTAATTCTGATT+AGG | - | chr4.1:7956015-7956034 | MS.gene70181:intron | 15.0% |
| !! | AAATCAAGATAATGAAATCA+GGG | + | chr4.1:7955417-7955436 | None:intergenic | 20.0% |
| !! | AAATTATCCTAAACAACTAT+TGG | + | chr4.1:7956662-7956681 | None:intergenic | 20.0% |
| !! | AATTCATTTAATTCAGTAGT+TGG | - | chr4.1:7955855-7955874 | MS.gene70181:intron | 20.0% |
| !! | ACAATTTATATAACAAATGG+AGG | + | chr4.1:7955509-7955528 | None:intergenic | 20.0% |
| !! | ATCTACATATGATACTTATT+TGG | - | chr4.1:7958715-7958734 | MS.gene70181:CDS | 20.0% |
| !! | ATTTAGAAATAGAAAAGGTA+AGG | - | chr4.1:7958393-7958412 | MS.gene70181:intron | 20.0% |
| !! | GAATTAAACAAAAAACATCA+TGG | + | chr4.1:7956010-7956029 | None:intergenic | 20.0% |
| !! | GATAGATTTAGAAATAGAAA+AGG | - | chr4.1:7958388-7958407 | MS.gene70181:intron | 20.0% |
| !! | GTAACATAGTATTAATTGAA+GGG | + | chr4.1:7956598-7956617 | None:intergenic | 20.0% |
| !! | TATTTAATTGCATCTAATAG+CGG | - | chr4.1:7954884-7954903 | MS.gene70181:intron | 20.0% |
| !! | TCTACATATGATACTTATTT+GGG | - | chr4.1:7958716-7958735 | MS.gene70181:CDS | 20.0% |
| !! | TGTAACATAGTATTAATTGA+AGG | + | chr4.1:7956599-7956618 | None:intergenic | 20.0% |
| !!! | AAATTCCATTCAATTTTCAA+TGG | - | chr4.1:7955009-7955028 | MS.gene70181:CDS | 20.0% |
| !!! | AATAGTTGTTTAGGATAATT+TGG | - | chr4.1:7956661-7956680 | MS.gene70181:intron | 20.0% |
| !!! | ATATATCACATTTTACCAAA+GGG | + | chr4.1:7957030-7957049 | None:intergenic | 20.0% |
| !!! | ATTTTCTTCTATACAATTCT+AGG | + | chr4.1:7956459-7956478 | None:intergenic | 20.0% |
| !!! | TTATATTTTCATAAAGCACT+TGG | - | chr4.1:7958858-7958877 | MS.gene70181:CDS | 20.0% |
| !!! | TTCATCATTTTGTATTTTGT+AGG | - | chr4.1:7957216-7957235 | MS.gene70181:intron | 20.0% |
| !!! | TTTGAATTGTAATTTTGTTG+TGG | - | chr4.1:7959008-7959027 | MS.gene70181:intron | 20.0% |
| !!! | TTTTAACAACTACAATCATT+AGG | + | chr4.1:7955901-7955920 | None:intergenic | 20.0% |
| ! | AAAAGGTCTATTGTTAAGTT+TGG | - | chr4.1:7954831-7954850 | MS.gene70181:intron | 25.0% |
| ! | AAACAAACCAATAGTTGTTT+AGG | - | chr4.1:7956652-7956671 | MS.gene70181:intron | 25.0% |
| ! | AAACATAACTTCTAATGTCT+AGG | - | chr4.1:7957853-7957872 | MS.gene70181:intron | 25.0% |
| ! | AAAGCAAAACAAATAAAAGC+TGG | + | chr4.1:7955834-7955853 | None:intergenic | 25.0% |
| ! | AAATCTGTACAATGTAAACA+TGG | + | chr4.1:7955656-7955675 | None:intergenic | 25.0% |
| ! | AACTAGGTACACAAATAATA+TGG | + | chr4.1:7957756-7957775 | None:intergenic | 25.0% |
| ! | AACTTAGAAGAAAAATCACA+TGG | - | chr4.1:7958678-7958697 | MS.gene70181:CDS | 25.0% |
| ! | AATAGTGTGTGTTGAAATTT+GGG | - | chr4.1:7955605-7955624 | MS.gene70181:intron | 25.0% |
| ! | AATCAAGATAATGAAATCAG+GGG | + | chr4.1:7955416-7955435 | None:intergenic | 25.0% |
| ! | ACTTAGAAGAAAAATCACAT+GGG | - | chr4.1:7958679-7958698 | MS.gene70181:CDS | 25.0% |
| ! | AGACATTAGAAGTTATGTTT+AGG | + | chr4.1:7957853-7957872 | None:intergenic | 25.0% |
| ! | ATACCAAATAATCACTAAGA+TGG | + | chr4.1:7959064-7959083 | None:intergenic | 25.0% |
| ! | ATCAACAATTTCATCATCAT+CGG | + | chr4.1:7954757-7954776 | None:intergenic | 25.0% |
| ! | ATCTACTTTAATAGTGCTAT+CGG | - | chr4.1:7955321-7955340 | MS.gene70181:intron | 25.0% |
| ! | ATGAGAATAGCATCAAAATA+TGG | + | chr4.1:7958162-7958181 | None:intergenic | 25.0% |
| ! | CAAATCAAGATAATGAAATC+AGG | + | chr4.1:7955418-7955437 | None:intergenic | 25.0% |
| ! | CAATTCCATTGAAAATTGAA+TGG | + | chr4.1:7955017-7955036 | None:intergenic | 25.0% |
| ! | CAGATTAGATAACCTTATAT+TGG | - | chr4.1:7955722-7955741 | MS.gene70181:intron | 25.0% |
| ! | CTATAACATGATACATCAAT+AGG | - | chr4.1:7958630-7958649 | MS.gene70181:intron | 25.0% |
| ! | CTTTGGTAAAATGTGATATA+TGG | - | chr4.1:7957029-7957048 | MS.gene70181:intron | 25.0% |
| ! | GAAGATAATTGAGATATTTG+AGG | - | chr4.1:7955070-7955089 | MS.gene70181:CDS | 25.0% |
| ! | TAAAAATCTCATGTCCATAT+TGG | - | chr4.1:7955978-7955997 | MS.gene70181:intron | 25.0% |
| ! | TAATCTGTATAATGCAAACA+TGG | + | chr4.1:7955709-7955728 | None:intergenic | 25.0% |
| ! | TAGATATAGCTTCCAATATA+AGG | + | chr4.1:7955737-7955756 | None:intergenic | 25.0% |
| ! | TATTGTATGTATGCATTAGA+TGG | + | chr4.1:7957361-7957380 | None:intergenic | 25.0% |
| !! | AACTTAACAATAGACCTTTT+TGG | + | chr4.1:7954831-7954850 | None:intergenic | 25.0% |
| !! | ATTTTCAATGGAATTGGATA+CGG | - | chr4.1:7955021-7955040 | MS.gene70181:CDS | 25.0% |
| !! | ATTTTGTATTAAACCGTGAA+TGG | + | chr4.1:7954945-7954964 | None:intergenic | 25.0% |
| !! | CATATATCACATTTTACCAA+AGG | + | chr4.1:7957031-7957050 | None:intergenic | 25.0% |
| !! | CATTCAATTTTCAATGGAAT+TGG | - | chr4.1:7955015-7955034 | MS.gene70181:CDS | 25.0% |
| !! | GTATTTCTATCAAATAGATG+TGG | - | chr4.1:7959080-7959099 | MS.gene70181:CDS | 25.0% |
| !! | TTTCAAATGTGATTTTGTTG+CGG | - | chr4.1:7958829-7958848 | MS.gene70181:CDS | 25.0% |
| !! | TTTGATGCTATTCTCATTTT+TGG | - | chr4.1:7958165-7958184 | MS.gene70181:intron | 25.0% |
| !! | TTTTACAACTCTACATTTTC+TGG | - | chr4.1:7958051-7958070 | MS.gene70181:intron | 25.0% |
| !! | TTTTTCCATGAACCATAAAA+CGG | + | chr4.1:7957535-7957554 | None:intergenic | 25.0% |
| !!! | AAACGACACTTATTTTGAAA+CGG | - | chr4.1:7956743-7956762 | MS.gene70181:intron | 25.0% |
| !!! | AATTGTAATTTTGTTGTGGT+GGG | - | chr4.1:7959012-7959031 | MS.gene70181:CDS | 25.0% |
| !!! | AGATATTCTAAAACACTGTA+TGG | + | chr4.1:7955958-7955977 | None:intergenic | 25.0% |
| !!! | TTCAAAATGAATGTCACTTT+CGG | - | chr4.1:7956535-7956554 | MS.gene70181:intron | 25.0% |
| !!! | TTGCTTTGATTTTTCTAAGT+CGG | - | chr4.1:7956851-7956870 | MS.gene70181:intron | 25.0% |
| AAAAAACTCAAGGCTCATAT+TGG | - | chr4.1:7957815-7957834 | MS.gene70181:intron | 30.0% | |
| AAAATGGCGTACAATAATCA+AGG | - | chr4.1:7954413-7954432 | MS.gene70181:intron | 30.0% | |
| AAATCTATCTCAGACTTTGT+AGG | + | chr4.1:7958377-7958396 | None:intergenic | 30.0% | |
| AACAAGACACGATTAAATTC+AGG | + | chr4.1:7954441-7954460 | None:intergenic | 30.0% | |
| AACTATTGCTTCTTTCATAG+AGG | - | chr4.1:7955788-7955807 | MS.gene70181:intron | 30.0% | |
| AATCTATCTCAGACTTTGTA+GGG | + | chr4.1:7958376-7958395 | None:intergenic | 30.0% | |
| ACCATTAGATCCACATTTAA+CGG | + | chr4.1:7954574-7954593 | None:intergenic | 30.0% | |
| ATAGTGTGTGTTGAAATTTG+GGG | - | chr4.1:7955606-7955625 | MS.gene70181:intron | 30.0% | |
| ATCTTTACTATGTACTGCTT+AGG | - | chr4.1:7957992-7958011 | MS.gene70181:intron | 30.0% | |
| ATGCCATCTTAGTGATTATT+TGG | - | chr4.1:7959058-7959077 | MS.gene70181:CDS | 30.0% | |
| CAAATTTCAACACACACTAT+TGG | + | chr4.1:7955606-7955625 | None:intergenic | 30.0% | |
| CAATAGTGTGTGTTGAAATT+TGG | - | chr4.1:7955604-7955623 | MS.gene70181:intron | 30.0% | |
| CAATTAGAGATCTTACTCAT+GGG | - | chr4.1:7958207-7958226 | MS.gene70181:intron | 30.0% | |
| GAGTGTTATAGCATTACATT+TGG | - | chr4.1:7957129-7957148 | MS.gene70181:intron | 30.0% | |
| GGTGTAATAGAAAAAACTCA+AGG | - | chr4.1:7957805-7957824 | MS.gene70181:intron | 30.0% | |
| GTTATAGCATTACATTTGGT+TGG | - | chr4.1:7957133-7957152 | MS.gene70181:intron | 30.0% | |
| TAAATGTGGATCTAATGGTT+TGG | - | chr4.1:7954575-7954594 | MS.gene70181:intron | 30.0% | |
| TAGGTACACAAATAATATGG+TGG | + | chr4.1:7957753-7957772 | None:intergenic | 30.0% | |
| TCAATTAGAGATCTTACTCA+TGG | - | chr4.1:7958206-7958225 | MS.gene70181:intron | 30.0% | |
| TCAATTATCTTCCACTTTCA+GGG | + | chr4.1:7955062-7955081 | None:intergenic | 30.0% | |
| TGTAAACATGGTTAAGCATA+CGG | + | chr4.1:7955644-7955663 | None:intergenic | 30.0% | |
| ! | ACTGGTTAGTATTTTGTATG+AGG | - | chr4.1:7956228-7956247 | MS.gene70181:CDS | 30.0% |
| ! | CTAAAGTATCTTACATCTAG+CGG | - | chr4.1:7957286-7957305 | MS.gene70181:intron | 30.0% |
| ! | CTGGTTAGTATTTTGTATGA+GGG | - | chr4.1:7956229-7956248 | MS.gene70181:CDS | 30.0% |
| !! | CAATTCTAGGACTATAAACA+AGG | + | chr4.1:7956446-7956465 | None:intergenic | 30.0% |
| !! | GAATTGTAATTTTGTTGTGG+TGG | - | chr4.1:7959011-7959030 | MS.gene70181:CDS | 30.0% |
| !! | GAGTTGATATTAGTACAAAG+AGG | - | chr4.1:7956037-7956056 | MS.gene70181:intron | 30.0% |
| !! | TGCTTTGATTTTTCTAAGTC+GGG | - | chr4.1:7956852-7956871 | MS.gene70181:intron | 30.0% |
| !! | TGGGTTGAGTTTTATATTTC+AGG | - | chr4.1:7958226-7958245 | MS.gene70181:intron | 30.0% |
| !!! | ACTGTTGTTTTTACCATTCA+CGG | - | chr4.1:7954929-7954948 | MS.gene70181:CDS | 30.0% |
| !!! | AGTTTGGCCCATATTTTTTT+TGG | - | chr4.1:7954847-7954866 | MS.gene70181:intron | 30.0% |
| !!! | CAGTTTTTTGCTAAAAGATG+AGG | - | chr4.1:7955160-7955179 | MS.gene70181:CDS | 30.0% |
| AAACCTCTATGAAATTGGAC+AGG | - | chr4.1:7958336-7958355 | MS.gene70181:intron | 35.0% | |
| AACCTCTATGAAATTGGACA+GGG | - | chr4.1:7958337-7958356 | MS.gene70181:intron | 35.0% | |
| AAGACCCATTTCCAAAATGT+GGG | - | chr4.1:7956135-7956154 | MS.gene70181:intron | 35.0% | |
| AAGGGTTTGTCTACTTTGTA+AGG | + | chr4.1:7957927-7957946 | None:intergenic | 35.0% | |
| AATCAAAAGGGTGAATCATC+CGG | - | chr4.1:7954680-7954699 | MS.gene70181:intron | 35.0% | |
| ACAATTTCATCATCATCGGA+TGG | + | chr4.1:7954753-7954772 | None:intergenic | 35.0% | |
| ACCGTTAAATGTGGATCTAA+TGG | - | chr4.1:7954570-7954589 | MS.gene70181:intron | 35.0% | |
| AGCAAAAAACTGTTCCATGA+TGG | + | chr4.1:7955152-7955171 | None:intergenic | 35.0% | |
| AGTCTCTTCGGATAGAAATA+AGG | - | chr4.1:7957610-7957629 | MS.gene70181:intron | 35.0% | |
| ATAGAGTTGTCATCCTGTTT+CGG | + | chr4.1:7954708-7954727 | None:intergenic | 35.0% | |
| ATCAGGACCAAAAAGACAAA+AGG | - | chr4.1:7957695-7957714 | MS.gene70181:CDS | 35.0% | |
| ATGGAGAAATTTGAGTGTGA+CGG | - | chr4.1:7954620-7954639 | MS.gene70181:intron | 35.0% | |
| ATTGCACACAGATTAAGGAA+TGG | + | chr4.1:7956718-7956737 | None:intergenic | 35.0% | |
| CACCCATGTTATTATTGGAA+GGG | - | chr4.1:7958306-7958325 | MS.gene70181:intron | 35.0% | |
| CATCATGGAATATGCCAATA+TGG | + | chr4.1:7955995-7956014 | None:intergenic | 35.0% | |
| CGGCTATTGTCTTTCAATTA+GGG | - | chr4.1:7955341-7955360 | MS.gene70181:intron | 35.0% | |
| CTAACCAGTATTTGTACTAG+AGG | + | chr4.1:7956217-7956236 | None:intergenic | 35.0% | |
| CTCAATTATCTTCCACTTTC+AGG | + | chr4.1:7955063-7955082 | None:intergenic | 35.0% | |
| CTCCCTTCCAATAATAACAT+GGG | + | chr4.1:7958311-7958330 | None:intergenic | 35.0% | |
| CTTCATCAAACCAACTTCTA+CGG | + | chr4.1:7957671-7957690 | None:intergenic | 35.0% | |
| CTTCCAATAATAACATGGGT+GGG | + | chr4.1:7958307-7958326 | None:intergenic | 35.0% | |
| GAAATGGGTCTTACATAAAG+TGG | + | chr4.1:7956127-7956146 | None:intergenic | 35.0% | |
| GATGTTCTATTCTGCAAACA+AGG | + | chr4.1:7955304-7955323 | None:intergenic | 35.0% | |
| GGATATCCCATTTATAGTAG+AGG | - | chr4.1:7957456-7957475 | MS.gene70181:intron | 35.0% | |
| GGCTATTGTCTTTCAATTAG+GGG | - | chr4.1:7955342-7955361 | MS.gene70181:intron | 35.0% | |
| GGGAAAAATCAAAGTCTCTT+CGG | - | chr4.1:7957598-7957617 | MS.gene70181:intron | 35.0% | |
| TAAGACCCATTTCCAAAATG+TGG | - | chr4.1:7956134-7956153 | MS.gene70181:intron | 35.0% | |
| TAATGTTGGACCGTTAAATG+TGG | - | chr4.1:7954561-7954580 | MS.gene70181:intron | 35.0% | |
| TCAGGACCAAAAAGACAAAA+GGG | - | chr4.1:7957696-7957715 | MS.gene70181:CDS | 35.0% | |
| TCATTCGATGAAATCCATGT+GGG | - | chr4.1:7956096-7956115 | MS.gene70181:intron | 35.0% | |
| TCGGCTATTGTCTTTCAATT+AGG | - | chr4.1:7955340-7955359 | MS.gene70181:intron | 35.0% | |
| TCTATCCTAGACACATGAAT+GGG | - | chr4.1:7957727-7957746 | MS.gene70181:CDS | 35.0% | |
| TCTCTCTTATTAGGTGAAAC+CGG | + | chr4.1:7956168-7956187 | None:intergenic | 35.0% | |
| TGGTTTGATGAAGTTGAATC+AGG | - | chr4.1:7957678-7957697 | MS.gene70181:intron | 35.0% | |
| TGTCTACTTTGTAAGGTTTG+AGG | + | chr4.1:7957920-7957939 | None:intergenic | 35.0% | |
| TTCCAACACTCTCTCTTATT+AGG | + | chr4.1:7956177-7956196 | None:intergenic | 35.0% | |
| TTCCTTAATCTGTGTGCAAT+TGG | - | chr4.1:7956718-7956737 | MS.gene70181:intron | 35.0% | |
| TTGCAAATTATCCCTGAAAG+TGG | - | chr4.1:7955048-7955067 | MS.gene70181:CDS | 35.0% | |
| ! | AAATGTGATTTTGTTGCGGA+GGG | - | chr4.1:7958833-7958852 | MS.gene70181:CDS | 35.0% |
| ! | AAGACGTAGTGGAATAGTAT+TGG | - | chr4.1:7957577-7957596 | MS.gene70181:intron | 35.0% |
| ! | AGACGTAGTGGAATAGTATT+GGG | - | chr4.1:7957578-7957597 | MS.gene70181:intron | 35.0% |
| ! | ATATCTAGCTTGAATGAGCT+TGG | - | chr4.1:7955750-7955769 | MS.gene70181:intron | 35.0% |
| ! | CAAATAGCTCTGCTTCATAA+TGG | + | chr4.1:7956879-7956898 | None:intergenic | 35.0% |
| ! | CTAATGCCCTTTTGTCTTTT+TGG | + | chr4.1:7957705-7957724 | None:intergenic | 35.0% |
| ! | CTTTACATCCCCTATCTTTT+GGG | - | chr4.1:7957488-7957507 | MS.gene70181:intron | 35.0% |
| ! | GATTTGCTTGCATTCTATAG+AGG | - | chr4.1:7955432-7955451 | MS.gene70181:intron | 35.0% |
| ! | GTATTTTGTAGGACCAATAC+CGG | - | chr4.1:7957227-7957246 | MS.gene70181:intron | 35.0% |
| ! | TCTAGGACTATAAACAAGGA+TGG | + | chr4.1:7956442-7956461 | None:intergenic | 35.0% |
| ! | TCTTTACATCCCCTATCTTT+TGG | - | chr4.1:7957487-7957506 | MS.gene70181:intron | 35.0% |
| ! | TGTGGTTTGGATAGGATAAA+TGG | - | chr4.1:7954601-7954620 | MS.gene70181:intron | 35.0% |
| ! | TTATATTTCAGGTGAAACGC+AGG | - | chr4.1:7958237-7958256 | MS.gene70181:intron | 35.0% |
| ! | TTTGGTTATGTGGTTTGGAT+AGG | - | chr4.1:7954593-7954612 | MS.gene70181:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr4.1:7956498-7956517 | None:intergenic | 35.0% |
| !! | AATGGTTTGGTTATGTGGTT+TGG | - | chr4.1:7954588-7954607 | MS.gene70181:intron | 35.0% |
| !! | GATCTAATGGTTTGGTTATG+TGG | - | chr4.1:7954583-7954602 | MS.gene70181:intron | 35.0% |
| !! | GCTCATATTGGTGTTAGATA+AGG | - | chr4.1:7957827-7957846 | MS.gene70181:intron | 35.0% |
| !! | GCTTTGATTTTTCTAAGTCG+GGG | - | chr4.1:7956853-7956872 | MS.gene70181:intron | 35.0% |
| !! | TCATTTACTCTAAGACGTAG+TGG | - | chr4.1:7957566-7957585 | MS.gene70181:intron | 35.0% |
| !!! | AACAACTTTTTGAAGTCTGC+TGG | + | chr4.1:7957256-7957275 | None:intergenic | 35.0% |
| !!! | GACACTTATTTTGAAACGGA+GGG | - | chr4.1:7956747-7956766 | MS.gene70181:intron | 35.0% |
| AACATGGTTAAGCATACGGT+TGG | + | chr4.1:7955640-7955659 | None:intergenic | 40.0% | |
| AAGATAGGGGATGTAAAGAC+AGG | + | chr4.1:7957486-7957505 | None:intergenic | 40.0% | |
| ACACCCACCCATGTTATTAT+TGG | - | chr4.1:7958301-7958320 | MS.gene70181:intron | 40.0% | |
| AGCTGCAATGAAAACACTGA+AGG | - | chr4.1:7958556-7958575 | MS.gene70181:intron | 40.0% | |
| AGGTCAGCCTCTACTATAAA+TGG | + | chr4.1:7957466-7957485 | None:intergenic | 40.0% | |
| AGTCTAAGGGAGCAATCAAA+AGG | - | chr4.1:7954667-7954686 | MS.gene70181:intron | 40.0% | |
| ATCCCTGTCCAATTTCATAG+AGG | + | chr4.1:7958342-7958361 | None:intergenic | 40.0% | |
| ATCTAGCGGAAAACTGATCA+AGG | - | chr4.1:7957300-7957319 | MS.gene70181:intron | 40.0% | |
| ATGTCTCTTGAGACTTGAAG+AGG | + | chr4.1:7954786-7954805 | None:intergenic | 40.0% | |
| ATTGCATCTAATAGCGGTAG+AGG | - | chr4.1:7954890-7954909 | MS.gene70181:intron | 40.0% | |
| ATTTATTACTCCAGCGCACA+AGG | + | chr4.1:7956384-7956403 | None:intergenic | 40.0% | |
| CAAATTTCGCTTTGCTACAG+TGG | + | chr4.1:7955221-7955240 | None:intergenic | 40.0% | |
| CACTCCTCTAGTACAAATAC+TGG | - | chr4.1:7956210-7956229 | MS.gene70181:CDS | 40.0% | |
| CCACCCATGTTATTATTGGA+AGG | - | chr4.1:7958305-7958324 | MS.gene70181:intron | 40.0% | |
| CCATGTTATTATTGGAAGGG+AGG | - | chr4.1:7958309-7958328 | MS.gene70181:intron | 40.0% | |
| CCTCCCTTCCAATAATAACA+TGG | + | chr4.1:7958312-7958331 | None:intergenic | 40.0% | |
| CCTTCCAATAATAACATGGG+TGG | + | chr4.1:7958308-7958327 | None:intergenic | 40.0% | |
| CTCATTCGATGAAATCCATG+TGG | - | chr4.1:7956095-7956114 | MS.gene70181:intron | 40.0% | |
| CTGCAATGAAAACACTGAAG+GGG | - | chr4.1:7958558-7958577 | MS.gene70181:intron | 40.0% | |
| GAAACAGGATGACAACTCTA+TGG | - | chr4.1:7954707-7954726 | MS.gene70181:intron | 40.0% | |
| GCTGCAATGAAAACACTGAA+GGG | - | chr4.1:7958557-7958576 | MS.gene70181:intron | 40.0% | |
| GGACTTTCACTTTACCATCA+TGG | - | chr4.1:7955135-7955154 | MS.gene70181:CDS | 40.0% | |
| GGATAGAAATAAGGCCTAAG+TGG | - | chr4.1:7957619-7957638 | MS.gene70181:intron | 40.0% | |
| GGTCAGCCTCTACTATAAAT+GGG | + | chr4.1:7957465-7957484 | None:intergenic | 40.0% | |
| GTACCTAGTTCAGTAGTGTT+GGG | - | chr4.1:7957766-7957785 | MS.gene70181:intron | 40.0% | |
| GTCTAAGGGAGCAATCAAAA+GGG | - | chr4.1:7954668-7954687 | MS.gene70181:intron | 40.0% | |
| GTCTATCCTAGACACATGAA+TGG | - | chr4.1:7957726-7957745 | MS.gene70181:CDS | 40.0% | |
| GTCTATGACCTCCATATCAA+TGG | + | chr4.1:7956284-7956303 | None:intergenic | 40.0% | |
| TAAGGTGGCTACCATTGATA+TGG | - | chr4.1:7956270-7956289 | MS.gene70181:intron | 40.0% | |
| TCCATATAACCTGCTTGTGA+GGG | - | chr4.1:7958765-7958784 | MS.gene70181:CDS | 40.0% | |
| TCTGATGTCCATTTCTGCTT+AGG | + | chr4.1:7954348-7954367 | None:intergenic | 40.0% | |
| TGCCAATTGCACACAGATTA+AGG | + | chr4.1:7956723-7956742 | None:intergenic | 40.0% | |
| TGGAGAAATTTGAGTGTGAC+GGG | - | chr4.1:7954621-7954640 | MS.gene70181:intron | 40.0% | |
| TGTACCTAGTTCAGTAGTGT+TGG | - | chr4.1:7957765-7957784 | MS.gene70181:intron | 40.0% | |
| TTCCATATAACCTGCTTGTG+AGG | - | chr4.1:7958764-7958783 | MS.gene70181:CDS | 40.0% | |
| TTCCTCTGTCTGAATATGCA+GGG | + | chr4.1:7958280-7958299 | None:intergenic | 40.0% | |
| TTGCATCTAATAGCGGTAGA+GGG | - | chr4.1:7954891-7954910 | MS.gene70181:intron | 40.0% | |
| ! | AATTTGAGTGTGACGGGAAA+TGG | - | chr4.1:7954627-7954646 | MS.gene70181:intron | 40.0% |
| ! | ACAATAGACCTTTTTGGACC+AGG | + | chr4.1:7954825-7954844 | None:intergenic | 40.0% |
| ! | CAAATGTGATTTTGTTGCGG+AGG | - | chr4.1:7958832-7958851 | MS.gene70181:CDS | 40.0% |
| ! | CACCTAATAAGAGAGAGTGT+TGG | - | chr4.1:7956172-7956191 | MS.gene70181:intron | 40.0% |
| ! | TGTGGTGGGATTTATCATTC+AGG | - | chr4.1:7959026-7959045 | MS.gene70181:CDS | 40.0% |
| ! | TTTTGTCCAATCACCAGTGT+GGG | - | chr4.1:7957428-7957447 | MS.gene70181:intron | 40.0% |
| ! | TTTTTGTCCAATCACCAGTG+TGG | - | chr4.1:7957427-7957446 | MS.gene70181:intron | 40.0% |
| !! | ATTTGTACTAGAGGAGTGCT+AGG | + | chr4.1:7956208-7956227 | None:intergenic | 40.0% |
| !! | CAACTCTACATTTTCTGGTG+TGG | - | chr4.1:7958056-7958075 | MS.gene70181:intron | 40.0% |
| !! | GGATCCCACATTTTGGAAAT+GGG | + | chr4.1:7956142-7956161 | None:intergenic | 40.0% |
| !! | TGGATCCCACATTTTGGAAA+TGG | + | chr4.1:7956143-7956162 | None:intergenic | 40.0% |
| !!! | AACTTTTTGAAGTCTGCTGG+TGG | + | chr4.1:7957253-7957272 | None:intergenic | 40.0% |
| !!! | CGACACTTATTTTGAAACGG+AGG | - | chr4.1:7956746-7956765 | MS.gene70181:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr4.1:7956494-7956513 | None:intergenic | 40.0% |
| !!! | TAACCAGGTTTTAGAAGGCA+TGG | + | chr4.1:7956943-7956962 | None:intergenic | 40.0% |
| !!! | TATTTTGAAACGGAGGGAGT+AGG | - | chr4.1:7956753-7956772 | MS.gene70181:intron | 40.0% |
| !!! | TTCTCTACAGTGCCGTTTTA+TGG | - | chr4.1:7957520-7957539 | MS.gene70181:intron | 40.0% |
| AAAGTGAAAGTCCCACCTTG+TGG | + | chr4.1:7955128-7955147 | None:intergenic | 45.0% | |
| AACCCACTCCCAAAAGATAG+GGG | + | chr4.1:7957499-7957518 | None:intergenic | 45.0% | |
| AAGTGGAGCTTGTAAAGCCT+GGG | - | chr4.1:7957636-7957655 | MS.gene70181:intron | 45.0% | |
| ACACCCAACACTACTGAACT+AGG | + | chr4.1:7957772-7957791 | None:intergenic | 45.0% | |
| AGAACCCACTCCCAAAAGAT+AGG | + | chr4.1:7957501-7957520 | None:intergenic | 45.0% | |
| AGGCTTTACAAGCTCCACTT+AGG | + | chr4.1:7957636-7957655 | None:intergenic | 45.0% | |
| AGGGACATTCGAAACAGCTA+AGG | + | chr4.1:7957011-7957030 | None:intergenic | 45.0% | |
| ATAAAGTGGTGAGACCCACA+TGG | + | chr4.1:7956113-7956132 | None:intergenic | 45.0% | |
| ATCATCGGATGGACCAGTAA+CGG | + | chr4.1:7954742-7954761 | None:intergenic | 45.0% | |
| CAATGTGACTACCATCGCTT+CGG | - | chr4.1:7955096-7955115 | MS.gene70181:CDS | 45.0% | |
| CTTATTAGGTGAAACCGGTG+TGG | + | chr4.1:7956163-7956182 | None:intergenic | 45.0% | |
| CTTCCTCTGTCTGAATATGC+AGG | + | chr4.1:7958281-7958300 | None:intergenic | 45.0% | |
| GAACCCACTCCCAAAAGATA+GGG | + | chr4.1:7957500-7957519 | None:intergenic | 45.0% | |
| GCAGAAATGGACATCAGAAG+AGG | - | chr4.1:7954350-7954369 | MS.gene70181:intron | 45.0% | |
| GCAGAGCTATTTGCACAATG+AGG | - | chr4.1:7956886-7956905 | MS.gene70181:intron | 45.0% | |
| GTGTGTGTTGAAATTTGGGG+CGG | - | chr4.1:7955609-7955628 | MS.gene70181:intron | 45.0% | |
| TAAGTGGAGCTTGTAAAGCC+TGG | - | chr4.1:7957635-7957654 | MS.gene70181:intron | 45.0% | |
| TCAAACCAACTTCTACGGTG+AGG | + | chr4.1:7957666-7957685 | None:intergenic | 45.0% | |
| TCCTCTGTCTGAATATGCAG+GGG | + | chr4.1:7958279-7958298 | None:intergenic | 45.0% | |
| TCGCTCAAATGTCGATCTCA+AGG | - | chr4.1:7954464-7954483 | MS.gene70181:intron | 45.0% | |
| TCTTGAGACTTGAAGAGGCT+GGG | + | chr4.1:7954781-7954800 | None:intergenic | 45.0% | |
| TTCAGGTGAAACGCAGGTAT+AGG | - | chr4.1:7958243-7958262 | MS.gene70181:intron | 45.0% | |
| TTGCTACAGTGGTAAACTGC+TGG | + | chr4.1:7955210-7955229 | None:intergenic | 45.0% | |
| TTGTCATCCTGTTTCGGTAC+CGG | + | chr4.1:7954702-7954721 | None:intergenic | 45.0% | |
| ! | AGCTGTTTCGAATGTCCCTT+TGG | - | chr4.1:7957012-7957031 | MS.gene70181:intron | 45.0% |
| ! | TCTAGCTTGAATGAGCTTGG+TGG | - | chr4.1:7955753-7955772 | MS.gene70181:intron | 45.0% |
| !! | ACTCCATGCCTTCTAAAACC+TGG | - | chr4.1:7956937-7956956 | MS.gene70181:intron | 45.0% |
| !! | ATCCCCTATCTTTTGGGAGT+GGG | - | chr4.1:7957494-7957513 | MS.gene70181:intron | 45.0% |
| !!! | CAGTGCCGTTTTATGGTTCA+TGG | - | chr4.1:7957527-7957546 | MS.gene70181:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr4.1:7956495-7956514 | None:intergenic | 45.0% |
| !!! | CGCAGTAACCAGGTTTTAGA+AGG | + | chr4.1:7956948-7956967 | None:intergenic | 45.0% |
| !! | AAAAACAAATAAAATAAAAA+TGG | + | chr4.1:7958925-7958944 | None:intergenic | 5.0% |
| !! | AAAAACAAATAAAATAAAAT+CGG | + | chr4.1:7958746-7958765 | None:intergenic | 5.0% |
| AAAGCTGGAGTTGCCAAGCA+TGG | - | chr4.1:7954384-7954403 | MS.gene70181:intron | 50.0% | |
| AAAGTCCCACCTTGTGGTGT+TGG | + | chr4.1:7955122-7955141 | None:intergenic | 50.0% | |
| AACCACAAGTCGCAGTAACC+AGG | + | chr4.1:7956958-7956977 | None:intergenic | 50.0% | |
| AACCTGGTTACTGCGACTTG+TGG | - | chr4.1:7956953-7956972 | MS.gene70181:intron | 50.0% | |
| AAGCTGGAGTTGCCAAGCAT+GGG | - | chr4.1:7954385-7954404 | MS.gene70181:intron | 50.0% | |
| AAGGTCCATGTCTGCTCAAG+AGG | - | chr4.1:7958412-7958431 | MS.gene70181:intron | 50.0% | |
| ACCCCTGCATATTCAGACAG+AGG | - | chr4.1:7958275-7958294 | MS.gene70181:intron | 50.0% | |
| ACCTCAGAGACGGTAAGTCT+TGG | - | chr4.1:7958587-7958606 | MS.gene70181:intron | 50.0% | |
| AGAAGCTGAAGAGGCAGCAA+AGG | - | chr4.1:7958484-7958503 | MS.gene70181:intron | 50.0% | |
| AGCTCCAGGGAGAAGTCTAA+GGG | - | chr4.1:7954654-7954673 | MS.gene70181:intron | 50.0% | |
| ATGGCTATCACTGCCGTTAC+TGG | - | chr4.1:7954726-7954745 | MS.gene70181:intron | 50.0% | |
| CAAGCAGAGAGGCTGTTACA+AGG | + | chr4.1:7956313-7956332 | None:intergenic | 50.0% | |
| CCAAAATGTGGGATCCACAC+CGG | - | chr4.1:7956146-7956165 | MS.gene70181:intron | 50.0% | |
| CCAAACACAACCCGACAAAG+CGG | + | chr4.1:7957897-7957916 | None:intergenic | 50.0% | |
| CGACTTGTGGTTTCTGTGAG+TGG | - | chr4.1:7956966-7956985 | MS.gene70181:intron | 50.0% | |
| CTCTTCAGCTTCTGCTATGG+CGG | + | chr4.1:7958477-7958496 | None:intergenic | 50.0% | |
| CTCTTGAGACTTGAAGAGGC+TGG | + | chr4.1:7954782-7954801 | None:intergenic | 50.0% | |
| CTGTCTGAATATGCAGGGGT+AGG | + | chr4.1:7958275-7958294 | None:intergenic | 50.0% | |
| GAGGAAGCAGCTCTTAAAGC+TGG | - | chr4.1:7954369-7954388 | MS.gene70181:intron | 50.0% | |
| GCAATCCTCACCGTAGAAGT+TGG | - | chr4.1:7957658-7957677 | MS.gene70181:intron | 50.0% | |
| GCCCTCACAAGCAGGTTATA+TGG | + | chr4.1:7958769-7958788 | None:intergenic | 50.0% | |
| GGTGGCTACCATTGATATGG+AGG | - | chr4.1:7956273-7956292 | MS.gene70181:intron | 50.0% | |
| TGCCTCTTCAGCTTCTGCTA+TGG | + | chr4.1:7958480-7958499 | None:intergenic | 50.0% | |
| TGCTTTATGCCCTCACAAGC+AGG | + | chr4.1:7958956-7958975 | None:intergenic | 50.0% | |
| TGGGTGCTCCTAAGCAGAAA+TGG | - | chr4.1:7954337-7954356 | MS.gene70181:intron | 50.0% | |
| TGTAACAGCCTCTCTGCTTG+CGG | - | chr4.1:7956313-7956332 | MS.gene70181:intron | 50.0% | |
| TTCCTGGTCCTGGTCCAAAA+AGG | - | chr4.1:7954814-7954833 | MS.gene70181:intron | 50.0% | |
| ! | AACCTGCTTGTGAGGGCATA+AGG | - | chr4.1:7958772-7958791 | MS.gene70181:CDS | 50.0% |
| ! | ACCTTTCAAGCCGCTTTGTC+GGG | - | chr4.1:7957884-7957903 | MS.gene70181:intron | 50.0% |
| ! | ATTTTGTATGAGGGCGAGCC+TGG | - | chr4.1:7956238-7956257 | MS.gene70181:CDS | 50.0% |
| ! | CACCTTTCAAGCCGCTTTGT+CGG | - | chr4.1:7957883-7957902 | MS.gene70181:intron | 50.0% |
| ! | GAATCATCCGGTACCGAAAC+AGG | - | chr4.1:7954692-7954711 | MS.gene70181:intron | 50.0% |
| ! | GTTCAGTAGTGTTGGGTGTG+AGG | - | chr4.1:7957773-7957792 | MS.gene70181:intron | 50.0% |
| ! | TTTTGTATGAGGGCGAGCCT+GGG | - | chr4.1:7956239-7956258 | MS.gene70181:CDS | 50.0% |
| !! | CATCCCCTATCTTTTGGGAG+TGG | - | chr4.1:7957493-7957512 | MS.gene70181:intron | 50.0% |
| !!! | TTTTGAAGTCTGCTGGTGGC+CGG | + | chr4.1:7957249-7957268 | None:intergenic | 50.0% |
| AAGGATCCCACGTGGGATCT+AGG | + | chr4.1:7956365-7956384 | None:intergenic | 55.0% | |
| ACCCGACAAAGCGGCTTGAA+AGG | + | chr4.1:7957888-7957907 | None:intergenic | 55.0% | |
| AGAGACATGCCGCACATTCC+TGG | - | chr4.1:7954798-7954817 | MS.gene70181:intron | 55.0% | |
| AGCTGAAGAGGCAGCAAAGG+AGG | - | chr4.1:7958487-7958506 | MS.gene70181:intron | 55.0% | |
| AGCTGGAGTTGCCAAGCATG+GGG | - | chr4.1:7954386-7954405 | MS.gene70181:intron | 55.0% | |
| AGGATCCCACGTGGGATCTA+GGG | + | chr4.1:7956364-7956383 | None:intergenic | 55.0% | |
| CAATCACCAGTGTGGGTGCA+TGG | - | chr4.1:7957435-7957454 | MS.gene70181:intron | 55.0% | |
| CATGCACCCACACTGGTGAT+TGG | + | chr4.1:7957437-7957456 | None:intergenic | 55.0% | |
| CCAAGCATGGGGTGGGAAAA+TGG | - | chr4.1:7954397-7954416 | MS.gene70181:intron | 55.0% | |
| CGCCATAGCAGAAGCTGAAG+AGG | - | chr4.1:7958475-7958494 | MS.gene70181:intron | 55.0% | |
| GACTGCTCGAGCAGCATATG+CGG | + | chr4.1:7958441-7958460 | None:intergenic | 55.0% | |
| GAGCTCCAGGGAGAAGTCTA+AGG | - | chr4.1:7954653-7954672 | MS.gene70181:intron | 55.0% | |
| GCCAAGACTTACCGTCTCTG+AGG | + | chr4.1:7958591-7958610 | None:intergenic | 55.0% | |
| GGATATCCATGCACCCACAC+TGG | + | chr4.1:7957444-7957463 | None:intergenic | 55.0% | |
| GGGAAATGGATCGAGCTCCA+GGG | - | chr4.1:7954641-7954660 | MS.gene70181:intron | 55.0% | |
| GGGGAGAAACACCTCAGAGA+CGG | - | chr4.1:7958577-7958596 | MS.gene70181:intron | 55.0% | |
| GGTGGCCCATTCATGTGTCT+AGG | + | chr4.1:7957735-7957754 | None:intergenic | 55.0% | |
| GTAACAGCCTCTCTGCTTGC+GGG | - | chr4.1:7956314-7956333 | MS.gene70181:intron | 55.0% | |
| TACTGCTTAGGCACAGCTGC+TGG | - | chr4.1:7958004-7958023 | MS.gene70181:intron | 55.0% | |
| TGCCTTATGCCCTCACAAGC+AGG | + | chr4.1:7958777-7958796 | None:intergenic | 55.0% | |
| TGCTCCCTTAGACTTCTCCC+TGG | + | chr4.1:7954661-7954680 | None:intergenic | 55.0% | |
| TTCGGCCAACACCACAAGGT+GGG | - | chr4.1:7955114-7955133 | MS.gene70181:CDS | 55.0% | |
| TTCTACGGTGAGGATTGCCC+AGG | + | chr4.1:7957656-7957675 | None:intergenic | 55.0% | |
| ! | ACAGCTGCTGGTTGTGGCTT+TGG | - | chr4.1:7958016-7958035 | MS.gene70181:intron | 55.0% |
| ! | CAGCTGCTGGTTGTGGCTTT+GGG | - | chr4.1:7958017-7958036 | MS.gene70181:intron | 55.0% |
| ! | CCATTTTCCCACCCCATGCT+TGG | + | chr4.1:7954400-7954419 | None:intergenic | 55.0% |
| ! | CCGCTTTGTCGGGTTGTGTT+TGG | - | chr4.1:7957894-7957913 | MS.gene70181:intron | 55.0% |
| ! | CCGGTGTGGATCCCACATTT+TGG | + | chr4.1:7956149-7956168 | None:intergenic | 55.0% |
| ! | GACCTTTTTGGACCAGGACC+AGG | + | chr4.1:7954819-7954838 | None:intergenic | 55.0% |
| ! | TTAGGCACAGCTGCTGGTTG+TGG | - | chr4.1:7958010-7958029 | MS.gene70181:intron | 55.0% |
| ACCCTCCCTAGATCCCACGT+GGG | - | chr4.1:7956356-7956375 | MS.gene70181:intron | 60.0% | |
| AGAGGCAGCAAAGGAGGCAG+AGG | - | chr4.1:7958493-7958512 | MS.gene70181:intron | 60.0% | |
| AGCGCACAAGGATCCCACGT+GGG | + | chr4.1:7956372-7956391 | None:intergenic | 60.0% | |
| AGTCTGCTGGTGGCCGGTAT+TGG | + | chr4.1:7957243-7957262 | None:intergenic | 60.0% | |
| ATCCCACGTGGGATCTAGGG+AGG | + | chr4.1:7956361-7956380 | None:intergenic | 60.0% | |
| ATGCCGCACATTCCTGGTCC+TGG | - | chr4.1:7954804-7954823 | MS.gene70181:intron | 60.0% | |
| CCTCTCTGCTTGCGGGTGTA+AGG | - | chr4.1:7956321-7956340 | MS.gene70181:intron | 60.0% | |
| CCTTACACCCGCAAGCAGAG+AGG | + | chr4.1:7956324-7956343 | None:intergenic | 60.0% | |
| CGAGCCTGGGCACAACGTTA+AGG | - | chr4.1:7956252-7956271 | MS.gene70181:intron | 60.0% | |
| CGGGAAATGGATCGAGCTCC+AGG | - | chr4.1:7954640-7954659 | MS.gene70181:intron | 60.0% | |
| CTTCGGCCAACACCACAAGG+TGG | - | chr4.1:7955113-7955132 | MS.gene70181:CDS | 60.0% | |
| GCCACCTTAACGTTGTGCCC+AGG | + | chr4.1:7956259-7956278 | None:intergenic | 60.0% | |
| GCCTGGGCACAACGTTAAGG+TGG | - | chr4.1:7956255-7956274 | MS.gene70181:intron | 60.0% | |
| GGACCAGGACCAGGAATGTG+CGG | + | chr4.1:7954810-7954829 | None:intergenic | 60.0% | |
| GGAGTTGCCAAGCATGGGGT+GGG | - | chr4.1:7954390-7954409 | MS.gene70181:intron | 60.0% | |
| GGCAGCCTCTTGAGCAGACA+TGG | + | chr4.1:7958420-7958439 | None:intergenic | 60.0% | |
| TACCCTCCCTAGATCCCACG+TGG | - | chr4.1:7956355-7956374 | MS.gene70181:intron | 60.0% | |
| TCCCACGTGGGATCTAGGGA+GGG | + | chr4.1:7956360-7956379 | None:intergenic | 60.0% | |
| TCGCTTCGGCCAACACCACA+AGG | - | chr4.1:7955110-7955129 | MS.gene70181:CDS | 60.0% | |
| TGGAGTTGCCAAGCATGGGG+TGG | - | chr4.1:7954389-7954408 | MS.gene70181:intron | 60.0% | |
| TTGGGTGTGAGGCTGTGAGC+AGG | - | chr4.1:7957784-7957803 | MS.gene70181:intron | 60.0% | |
| !! | TGTGGTGTTGGCCGAAGCGA+TGG | + | chr4.1:7955110-7955129 | None:intergenic | 60.0% |
| CACGTGGGATCCTTGTGCGC+TGG | - | chr4.1:7956371-7956390 | MS.gene70181:intron | 65.0% | |
| CAGCGCACAAGGATCCCACG+TGG | + | chr4.1:7956373-7956392 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 7954336 | 7959160 | 7954336 | ID=MS.gene70181 |
| chr4.1 | mRNA | 7954336 | 7959160 | 7954336 | ID=MS.gene70181.t1;Parent=MS.gene70181 |
| chr4.1 | exon | 7959011 | 7959160 | 7959011 | ID=MS.gene70181.t1.exon1;Parent=MS.gene70181.t1 |
| chr4.1 | CDS | 7959011 | 7959160 | 7959011 | ID=cds.MS.gene70181.t1;Parent=MS.gene70181.t1 |
| chr4.1 | exon | 7958661 | 7958881 | 7958661 | ID=MS.gene70181.t1.exon2;Parent=MS.gene70181.t1 |
| chr4.1 | CDS | 7958661 | 7958881 | 7958661 | ID=cds.MS.gene70181.t1;Parent=MS.gene70181.t1 |
| chr4.1 | exon | 7957687 | 7957771 | 7957687 | ID=MS.gene70181.t1.exon3;Parent=MS.gene70181.t1 |
| chr4.1 | CDS | 7957687 | 7957771 | 7957687 | ID=cds.MS.gene70181.t1;Parent=MS.gene70181.t1 |
| chr4.1 | exon | 7956175 | 7956258 | 7956175 | ID=MS.gene70181.t1.exon4;Parent=MS.gene70181.t1 |
| chr4.1 | CDS | 7956175 | 7956258 | 7956175 | ID=cds.MS.gene70181.t1;Parent=MS.gene70181.t1 |
| chr4.1 | exon | 7954898 | 7955248 | 7954898 | ID=MS.gene70181.t1.exon5;Parent=MS.gene70181.t1 |
| chr4.1 | CDS | 7954898 | 7955248 | 7954898 | ID=cds.MS.gene70181.t1;Parent=MS.gene70181.t1 |
| chr4.1 | exon | 7954336 | 7954350 | 7954336 | ID=MS.gene70181.t1.exon6;Parent=MS.gene70181.t1 |
| chr4.1 | CDS | 7954336 | 7954350 | 7954336 | ID=cds.MS.gene70181.t1;Parent=MS.gene70181.t1 |
| Gene Sequence |
| Protein sequence |
