Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70262.t1 | AET04670.2 | 91.8 | 256 | 21 | 0 | 1 | 256 | 1 | 256 | 1.10E-123 | 453 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70262.t1 | Q8VWK4 | 46.9 | 262 | 119 | 8 | 1 | 257 | 1 | 247 | 1.4e-50 | 201.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70262.t1 | G7LCB1 | 91.8 | 256 | 21 | 0 | 1 | 256 | 1 | 256 | 7.9e-124 | 453.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene70262.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70262.t1 | MTR_8g092810 | 94.862 | 253 | 13 | 0 | 1 | 253 | 1 | 253 | 5.00e-176 | 494 |
| MS.gene70262.t1 | MTR_2g031870 | 64.919 | 248 | 78 | 1 | 1 | 248 | 1 | 239 | 4.01e-109 | 319 |
| MS.gene70262.t1 | MTR_8g494240 | 64.400 | 250 | 74 | 4 | 1 | 248 | 1 | 237 | 1.66e-105 | 310 |
| MS.gene70262.t1 | MTR_8g494240 | 64.400 | 250 | 74 | 4 | 1 | 248 | 1 | 237 | 3.85e-105 | 309 |
| MS.gene70262.t1 | MTR_8g494240 | 64.400 | 250 | 74 | 4 | 1 | 248 | 1 | 237 | 6.01e-104 | 309 |
| MS.gene70262.t1 | MTR_8g494240 | 42.857 | 112 | 34 | 3 | 3 | 114 | 304 | 385 | 2.16e-15 | 76.3 |
| MS.gene70262.t1 | MTR_2g031870 | 56.048 | 248 | 74 | 2 | 1 | 248 | 1 | 213 | 6.15e-84 | 254 |
| MS.gene70262.t1 | MTR_0095s0040 | 66.883 | 154 | 49 | 1 | 1 | 152 | 1 | 154 | 6.52e-68 | 212 |
| MS.gene70262.t1 | MTR_4g097130 | 39.015 | 264 | 132 | 5 | 1 | 248 | 1 | 251 | 1.24e-53 | 177 |
| MS.gene70262.t1 | MTR_4g097130 | 39.015 | 264 | 132 | 5 | 1 | 248 | 1 | 251 | 1.48e-53 | 177 |
| MS.gene70262.t1 | MTR_4g097130 | 37.918 | 269 | 133 | 5 | 1 | 248 | 1 | 256 | 3.30e-52 | 174 |
| MS.gene70262.t1 | MTR_5g015340 | 44.884 | 303 | 153 | 4 | 1 | 302 | 1 | 290 | 1.59e-50 | 169 |
| MS.gene70262.t1 | MTR_5g015340 | 44.884 | 303 | 153 | 4 | 1 | 302 | 1 | 290 | 1.59e-50 | 169 |
| MS.gene70262.t1 | MTR_5g015340 | 44.884 | 303 | 153 | 4 | 1 | 302 | 1 | 290 | 2.14e-49 | 169 |
| MS.gene70262.t1 | MTR_1g088180 | 51.969 | 127 | 49 | 3 | 125 | 251 | 295 | 409 | 1.82e-31 | 122 |
| MS.gene70262.t1 | MTR_8g018410 | 32.459 | 305 | 164 | 9 | 1 | 296 | 1 | 272 | 1.12e-29 | 114 |
| MS.gene70262.t1 | MTR_2g099610 | 32.877 | 219 | 102 | 5 | 1 | 187 | 1 | 206 | 2.03e-26 | 105 |
| MS.gene70262.t1 | MTR_1g041765 | 67.188 | 64 | 21 | 0 | 1 | 64 | 1 | 64 | 5.71e-25 | 99.8 |
| MS.gene70262.t1 | MTR_2g031880 | 47.706 | 109 | 49 | 2 | 60 | 168 | 2 | 102 | 7.83e-19 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70262.t1 | AT1G49950 | 46.512 | 258 | 112 | 9 | 1 | 250 | 1 | 240 | 1.18e-65 | 208 |
| MS.gene70262.t1 | AT1G49950 | 46.512 | 258 | 112 | 9 | 1 | 250 | 1 | 240 | 1.18e-65 | 208 |
| MS.gene70262.t1 | AT1G49950 | 46.512 | 258 | 112 | 9 | 1 | 250 | 1 | 240 | 1.18e-65 | 208 |
| MS.gene70262.t1 | AT5G67580 | 42.384 | 302 | 160 | 5 | 1 | 299 | 1 | 291 | 1.16e-44 | 154 |
| MS.gene70262.t1 | AT5G67580 | 42.384 | 302 | 160 | 5 | 1 | 299 | 1 | 291 | 1.16e-44 | 154 |
| MS.gene70262.t1 | AT3G49850 | 36.530 | 219 | 137 | 2 | 1 | 219 | 1 | 217 | 1.44e-39 | 140 |
| MS.gene70262.t1 | AT3G49850 | 36.530 | 219 | 137 | 2 | 1 | 219 | 1 | 217 | 1.44e-39 | 140 |
| MS.gene70262.t1 | AT1G72740 | 36.316 | 190 | 113 | 3 | 1 | 187 | 1 | 185 | 9.16e-29 | 112 |
| MS.gene70262.t1 | AT1G72740 | 36.957 | 184 | 108 | 3 | 1 | 181 | 1 | 179 | 2.23e-27 | 108 |
| MS.gene70262.t1 | AT1G17520 | 35.638 | 188 | 116 | 1 | 1 | 183 | 1 | 188 | 1.01e-24 | 101 |
| MS.gene70262.t1 | AT1G17520 | 34.737 | 190 | 119 | 1 | 1 | 185 | 1 | 190 | 3.98e-24 | 99.8 |
| MS.gene70262.t1 | AT1G17520 | 35.979 | 189 | 115 | 2 | 1 | 183 | 1 | 189 | 8.52e-24 | 99.0 |
| MS.gene70262.t1 | AT1G17520 | 35.079 | 191 | 118 | 2 | 1 | 185 | 1 | 191 | 3.23e-23 | 97.1 |
Find 73 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAGATATGCTGGAAATTA+AGG | 0.140872 | 4.1:+8866596 | MS.gene70262:CDS |
| AACTATTGCTTCTTTCATTA+AGG | 0.194532 | 4.1:+8867548 | MS.gene70262:CDS |
| AAACCGACCCATGTTATTAT+TGG | 0.212298 | 4.1:+8869995 | MS.gene70262:CDS |
| ACTCTCAGCTAGCAATAAAA+AGG | 0.232134 | 4.1:+8866472 | MS.gene70262:CDS |
| TAGATATTGCTTCCACTATA+AGG | 0.286103 | 4.1:-8867494 | None:intergenic |
| TGTGGGTTGCATAGGATAAA+TGG | 0.335902 | 4.1:+8866406 | MS.gene70262:intron |
| TGAAGCATGGCGTAGGTAAA+TGG | 0.346059 | 4.1:+8866206 | MS.gene70262:CDS |
| TTCCTCTATCTGAATATGCT+TGG | 0.349369 | 4.1:-8869971 | None:intergenic |
| AAATAAGCTGTCAGCAAAAC+TGG | 0.353881 | 4.1:+8868980 | MS.gene70262:CDS |
| TCCTCTATCTGAATATGCTT+GGG | 0.366075 | 4.1:-8869970 | None:intergenic |
| GGCTGAGATAGACTTGGAAT+TGG | 0.370284 | 4.1:+8870103 | MS.gene70262:CDS |
| CTATTAAATCTGACAGGGGT+GGG | 0.403434 | 4.1:+8870036 | MS.gene70262:CDS |
| ACAGATATGCTGGAAATTAA+GGG | 0.415666 | 4.1:+8866597 | MS.gene70262:CDS |
| GAGGAAGCGGCTCTCAAAGC+TGG | 0.427705 | 4.1:+8866178 | MS.gene70262:CDS |
| ACGGAGTCGTCACGCTGTTC+TGG | 0.440395 | 4.1:-8866510 | None:intergenic |
| TATTAAATCTGACAGGGGTG+GGG | 0.448513 | 4.1:+8870037 | MS.gene70262:CDS |
| TCAAGTTAAAACAGATATGC+TGG | 0.453383 | 4.1:+8866587 | MS.gene70262:CDS |
| AATCTGCCGGTGCGCAGTAT+TGG | 0.455578 | 4.1:-8868953 | None:intergenic |
| ATTAAATCTGACAGGGGTGG+GGG | 0.463232 | 4.1:+8870038 | MS.gene70262:CDS |
| AAGCCTCTATTAAATCTGAC+AGG | 0.463302 | 4.1:+8870030 | MS.gene70262:CDS |
| AATATGAGTCTGAAGGCAAA+TGG | 0.474909 | 4.1:+8866432 | MS.gene70262:CDS |
| ACCCAAGCATATTCAGATAG+AGG | 0.477513 | 4.1:+8869969 | MS.gene70262:CDS |
| AGGCAAATGGATCATCCTCC+GGG | 0.485206 | 4.1:+8866445 | MS.gene70262:CDS |
| CGCCATGGCAGAAGCTGAAG+AGG | 0.487462 | 4.1:+8870196 | MS.gene70262:CDS |
| ACCCCTGTCAGATTTAATAG+AGG | 0.496957 | 4.1:-8870033 | None:intergenic |
| CCTCCCTTCCAATAATAACA+TGG | 0.497696 | 4.1:-8870003 | None:intergenic |
| TGCCTCTTCAGCTTCTGCCA+TGG | 0.502504 | 4.1:-8870198 | None:intergenic |
| AAGGCAAATGGATCATCCTC+CGG | 0.503120 | 4.1:+8866444 | MS.gene70262:CDS |
| CAGATTGGACAACCTTATAG+TGG | 0.503998 | 4.1:+8867482 | MS.gene70262:intron |
| CTGGTGGATCTTGTATCTAG+TGG | 0.509226 | 4.1:+8868999 | MS.gene70262:CDS |
| GTCCGGAAAGGTCTATCAAA+AGG | 0.511188 | 4.1:+8866619 | MS.gene70262:CDS |
| TATGCTGGAAATTAAGGGTC+CGG | 0.513448 | 4.1:+8866602 | MS.gene70262:CDS |
| TTATATTTCAGGTGAAACAT+AGG | 0.516350 | 4.1:+8869931 | MS.gene70262:intron |
| CGACCCATGTTATTATTGGA+AGG | 0.524027 | 4.1:+8869999 | MS.gene70262:CDS |
| ATCTAGTGGAAAACTGATCA+AGG | 0.537966 | 4.1:+8869013 | MS.gene70262:CDS |
| AAAGTCCATGTCTTTACAAG+AGG | 0.539777 | 4.1:+8870133 | MS.gene70262:CDS |
| TGCTGAAGCAGAAGCCGCCA+TGG | 0.540719 | 4.1:+8870181 | MS.gene70262:CDS |
| AGAGGCAACAAAGGAGGCAG+AGG | 0.547850 | 4.1:+8870214 | MS.gene70262:CDS |
| AGAAGCTGAAGAGGCAACAA+AGG | 0.557008 | 4.1:+8870205 | MS.gene70262:CDS |
| CCGCTCAAATATCGATCTCA+AGG | 0.560055 | 4.1:+8866273 | MS.gene70262:CDS |
| AAGAAAGGCTGAGATAGACT+TGG | 0.566957 | 4.1:+8870097 | MS.gene70262:CDS |
| CTCTTCAGCTTCTGCCATGG+CGG | 0.568303 | 4.1:-8870195 | None:intergenic |
| ATGGTCATCAGAAGAGGAAG+CGG | 0.577986 | 4.1:+8866165 | MS.gene70262:CDS |
| ACAGAAATGGTCATCAGAAG+AGG | 0.578108 | 4.1:+8866159 | MS.gene70262:CDS |
| AGCAATATCTAGCTTGAATG+AGG | 0.580943 | 4.1:+8867506 | MS.gene70262:CDS |
| GACCCATGTTATTATTGGAA+GGG | 0.581327 | 4.1:+8870000 | MS.gene70262:CDS |
| CTATCTGAATATGCTTGGGT+AGG | 0.584721 | 4.1:-8869966 | None:intergenic |
| ATGGAGAAATATGAGTCTGA+AGG | 0.599241 | 4.1:+8866425 | MS.gene70262:CDS |
| TGGGTGCTACTAGACAGAAA+TGG | 0.601772 | 4.1:+8866146 | MS.gene70262:CDS |
| AGCCTCTATTAAATCTGACA+GGG | 0.601960 | 4.1:+8870031 | MS.gene70262:CDS |
| CTTCCAATAATAACATGGGT+CGG | 0.603083 | 4.1:-8869998 | None:intergenic |
| CCATGTTATTATTGGAAGGG+AGG | 0.603196 | 4.1:+8870003 | MS.gene70262:CDS |
| GGAGTTGTGAAGCATGGCGT+AGG | 0.603718 | 4.1:+8866199 | MS.gene70262:CDS |
| TGCTAGCTGAGAGTTGTCCC+CGG | 0.606787 | 4.1:-8866463 | None:intergenic |
| CTCCCTTCCAATAATAACAT+GGG | 0.607660 | 4.1:-8870002 | None:intergenic |
| TCTATTAAATCTGACAGGGG+TGG | 0.615717 | 4.1:+8870035 | MS.gene70262:CDS |
| AGTAACAAAATTTACAGCCA+CGG | 0.615875 | 4.1:-8866529 | None:intergenic |
| AAAGCTGGAGTTGTGAAGCA+TGG | 0.620365 | 4.1:+8866193 | MS.gene70262:CDS |
| AGCTGAAGAGGCAACAAAGG+AGG | 0.624067 | 4.1:+8870208 | MS.gene70262:CDS |
| TAAGCTGTCAGCAAAACTGG+TGG | 0.625095 | 4.1:+8868983 | MS.gene70262:CDS |
| AGAAGCAGAAGCTGATGCAG+CGG | 0.627843 | 4.1:+8870241 | MS.gene70262:CDS |
| TACAACACATGGTTAAACTC+AGG | 0.630999 | 4.1:-8866247 | None:intergenic |
| CCTTGAGATCGATATTTGAG+CGG | 0.641849 | 4.1:-8866273 | None:intergenic |
| TGGAAATTAAGGGTCCGGAA+AGG | 0.649175 | 4.1:+8866607 | MS.gene70262:CDS |
| TCTAGCTTGAATGAGGTCGA+TGG | 0.649394 | 4.1:+8867513 | MS.gene70262:CDS |
| GTAGAACCAATACTGCGCAC+CGG | 0.653755 | 4.1:+8868947 | MS.gene70262:intron |
| GATTACCTCTTGTAAAGACA+TGG | 0.659824 | 4.1:-8870138 | None:intergenic |
| GCCTCTATTAAATCTGACAG+GGG | 0.668262 | 4.1:+8870032 | MS.gene70262:CDS |
| TAAATGGAGTAAGATACTCA+AGG | 0.669197 | 4.1:+8866222 | MS.gene70262:CDS |
| TTGAGCGGATATACAACACA+TGG | 0.677687 | 4.1:-8866258 | None:intergenic |
| AGAACAGCGTGACGACTCCG+TGG | 0.703510 | 4.1:+8866512 | MS.gene70262:CDS |
| TAGCTGAGAGTTGTCCCCGG+AGG | 0.710409 | 4.1:-8866460 | None:intergenic |
| GGCAAATGGATCATCCTCCG+GGG | 0.731603 | 4.1:+8866446 | MS.gene70262:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAGAAAAAAAAAAAAAG+TGG | - | chr4.1:8869584-8869603 | None:intergenic | 10.0% |
| !! | AATACATTATTATATGTAAA+GGG | - | chr4.1:8866342-8866361 | None:intergenic | 10.0% |
| !!! | TGCTTTTAAATTATTAAATT+TGG | + | chr4.1:8867608-8867627 | MS.gene70262:intron | 10.0% |
| !! | AAATTAAACAAATAACATCA+TGG | - | chr4.1:8867753-8867772 | None:intergenic | 15.0% |
| !! | ACTAAACAAAACAAAAAATA+TGG | - | chr4.1:8866651-8866670 | None:intergenic | 15.0% |
| !! | ATAATGTATTGAATAAATGT+TGG | + | chr4.1:8866352-8866371 | MS.gene70262:intron | 15.0% |
| !! | CAATACATTATTATATGTAA+AGG | - | chr4.1:8866343-8866362 | None:intergenic | 15.0% |
| !! | CTAAACAAAACAAAAAATAT+GGG | - | chr4.1:8866650-8866669 | None:intergenic | 15.0% |
| !! | TAAACAAAACAAAAAATATG+GGG | - | chr4.1:8866649-8866668 | None:intergenic | 15.0% |
| !! | TAGTATGGTAATTTATTTAA+TGG | + | chr4.1:8866667-8866686 | MS.gene70262:intron | 15.0% |
| !! | TATAAGATGCAATTAAATAA+GGG | - | chr4.1:8866850-8866869 | None:intergenic | 15.0% |
| !! | TCAAAATGAAAAATTTATCT+TGG | + | chr4.1:8866729-8866748 | MS.gene70262:intron | 15.0% |
| !! | TTCTTCATTTATATATATCA+AGG | + | chr4.1:8868119-8868138 | MS.gene70262:intron | 15.0% |
| !!! | ATTTTGATTAGTACAAAAAT+TGG | + | chr4.1:8867769-8867788 | MS.gene70262:intron | 15.0% |
| !!! | ATTTTTTGTTTTGTTTAGTA+TGG | + | chr4.1:8866652-8866671 | MS.gene70262:intron | 15.0% |
| !!! | GTTTTTGTTCTTTATATTTT+AGG | + | chr4.1:8869799-8869818 | MS.gene70262:intron | 15.0% |
| !! | AAATAGAACTTCTAATATCT+AGG | + | chr4.1:8869540-8869559 | MS.gene70262:intron | 20.0% |
| !! | AAGGTATAATTATGATTTCT+AGG | + | chr4.1:8867567-8867586 | MS.gene70262:intron | 20.0% |
| !! | AGATATTAGAAGTTCTATTT+AGG | - | chr4.1:8869540-8869559 | None:intergenic | 20.0% |
| !! | ATATAATTTAATTGTGCTAC+CGG | + | chr4.1:8867268-8867287 | MS.gene70262:intron | 20.0% |
| !! | CATAGATTATCAAAAAAGAA+AGG | + | chr4.1:8870082-8870101 | MS.gene70262:CDS | 20.0% |
| !! | CTATAAGATGCAATTAAATA+AGG | - | chr4.1:8866851-8866870 | None:intergenic | 20.0% |
| !!! | AACTTTTTAACAAATGTCTT+TGG | - | chr4.1:8866710-8866729 | None:intergenic | 20.0% |
| !!! | AATCTATGTCATACTTTTTA+GGG | - | chr4.1:8870070-8870089 | None:intergenic | 20.0% |
| !!! | ACTTTTTAACAAATGTCTTT+GGG | - | chr4.1:8866709-8866728 | None:intergenic | 20.0% |
| !!! | TAATCTATGTCATACTTTTT+AGG | - | chr4.1:8870071-8870090 | None:intergenic | 20.0% |
| !!! | TACATTTTCTAATGTTTACA+TGG | + | chr4.1:8869741-8869760 | MS.gene70262:intron | 20.0% |
| ! | AAAAATCACTAAAATCACTG+CGG | + | chr4.1:8870285-8870304 | MS.gene70262:CDS | 25.0% |
| ! | AAAGCAGAACAAATAAAAGT+TGG | - | chr4.1:8867594-8867613 | None:intergenic | 25.0% |
| ! | AACTATTGCTTCTTTCATTA+AGG | + | chr4.1:8867548-8867567 | MS.gene70262:CDS | 25.0% |
| ! | AAGCAGAACAAATAAAAGTT+GGG | - | chr4.1:8867593-8867612 | None:intergenic | 25.0% |
| ! | AGAAGAAAATGTAAGAAGTA+GGG | + | chr4.1:8868020-8868039 | MS.gene70262:intron | 25.0% |
| ! | ATAAACCAATAGGGATATTA+CGG | - | chr4.1:8866934-8866953 | None:intergenic | 25.0% |
| ! | ATTTATTGTGAGCGATATTT+GGG | + | chr4.1:8869854-8869873 | MS.gene70262:intron | 25.0% |
| ! | CAAAACAAGAGAATGAAATT+AGG | - | chr4.1:8867371-8867390 | None:intergenic | 25.0% |
| ! | CAATCTGTATAATGTAAACA+TGG | - | chr4.1:8867469-8867488 | None:intergenic | 25.0% |
| ! | CAATTAGAGATCTTACTAAT+GGG | + | chr4.1:8869901-8869920 | MS.gene70262:intron | 25.0% |
| ! | CATCAAATGATATTGAAACA+TGG | + | chr4.1:8869207-8869226 | MS.gene70262:intron | 25.0% |
| ! | CATGTTTACATTATACAGAT+TGG | + | chr4.1:8867467-8867486 | MS.gene70262:intron | 25.0% |
| ! | CTAAGTTAAGGATTCAAAAA+AGG | - | chr4.1:8866822-8866841 | None:intergenic | 25.0% |
| ! | TAGAAGAAAATGTAAGAAGT+AGG | + | chr4.1:8868019-8868038 | MS.gene70262:intron | 25.0% |
| ! | TAGCAAAATCAAAGCAATTA+TGG | - | chr4.1:8868512-8868531 | None:intergenic | 25.0% |
| ! | TCAATTAGAGATCTTACTAA+TGG | + | chr4.1:8869900-8869919 | MS.gene70262:intron | 25.0% |
| !! | AAAAAAAAAAGTGGCTTGTA+AGG | - | chr4.1:8869575-8869594 | None:intergenic | 25.0% |
| !! | TTATATTTCAGGTGAAACAT+AGG | + | chr4.1:8869931-8869950 | MS.gene70262:intron | 25.0% |
| !!! | AATATCCCTATTGGTTTATT+TGG | + | chr4.1:8866935-8866954 | MS.gene70262:intron | 25.0% |
| !!! | ATATCTGTTTTAACTTGAAG+AGG | - | chr4.1:8866585-8866604 | None:intergenic | 25.0% |
| !!! | ATGCTATTTCAACTTTCAAT+TGG | + | chr4.1:8868766-8868785 | MS.gene70262:intron | 25.0% |
| !!! | TTTCACAACGTATTTTTTTG+TGG | + | chr4.1:8869117-8869136 | MS.gene70262:intron | 25.0% |
| AAAATTATCTTCCACTTCCA+AGG | - | chr4.1:8867010-8867029 | None:intergenic | 30.0% | |
| AACAGATATGCTGGAAATTA+AGG | + | chr4.1:8866596-8866615 | MS.gene70262:CDS | 30.0% | |
| AAGTTCTATAGCATTCCATT+TGG | + | chr4.1:8868842-8868861 | MS.gene70262:intron | 30.0% | |
| ACAGATATGCTGGAAATTAA+GGG | + | chr4.1:8866597-8866616 | MS.gene70262:CDS | 30.0% | |
| AGTAACAAAATTTACAGCCA+CGG | - | chr4.1:8866532-8866551 | None:intergenic | 30.0% | |
| ATATACTAAGCTTCCATTCA+TGG | - | chr4.1:8868696-8868715 | None:intergenic | 30.0% | |
| ATCAAAGCAATTATGGTGTA+CGG | - | chr4.1:8868505-8868524 | None:intergenic | 30.0% | |
| ATCTCAATGTTTGGTTATGT+GGG | + | chr4.1:8866389-8866408 | MS.gene70262:intron | 30.0% | |
| ATTGCTTACACATGAATAGA+AGG | + | chr4.1:8868142-8868161 | MS.gene70262:intron | 30.0% | |
| CATTTATTGTGAGCGATATT+TGG | + | chr4.1:8869853-8869872 | MS.gene70262:intron | 30.0% | |
| TAAATGGAGTAAGATACTCA+AGG | + | chr4.1:8866222-8866241 | MS.gene70262:CDS | 30.0% | |
| TAGATATTGCTTCCACTATA+AGG | - | chr4.1:8867497-8867516 | None:intergenic | 30.0% | |
| TATTGTATGTTTGCATGAGA+TGG | - | chr4.1:8869074-8869093 | None:intergenic | 30.0% | |
| TCAAGTTAAAACAGATATGC+TGG | + | chr4.1:8866587-8866606 | MS.gene70262:CDS | 30.0% | |
| TCAATTGGCTAAATCTTATG+TGG | + | chr4.1:8868781-8868800 | MS.gene70262:intron | 30.0% | |
| TGAGATCTTCAAAAGATATC+CGG | + | chr4.1:8867029-8867048 | MS.gene70262:intron | 30.0% | |
| TTCGACCAAATAAACCAATA+GGG | - | chr4.1:8866943-8866962 | None:intergenic | 30.0% | |
| TTTCGACCAAATAAACCAAT+AGG | - | chr4.1:8866944-8866963 | None:intergenic | 30.0% | |
| ! | GTCAAACATTTACTCTAAAG+AGG | + | chr4.1:8869341-8869360 | MS.gene70262:intron | 30.0% |
| ! | GTTTTATATTTAGCGCTTCA+TGG | + | chr4.1:8869307-8869326 | MS.gene70262:intron | 30.0% |
| ! | TTTTATCCAATCACCAGTAT+CGG | + | chr4.1:8869140-8869159 | MS.gene70262:intron | 30.0% |
| !! | TAGAAAAGTATCCAACCAAA+TGG | - | chr4.1:8868860-8868879 | None:intergenic | 30.0% |
| !!! | AGCTTATTTTTGAAATCTGC+CGG | - | chr4.1:8868969-8868988 | None:intergenic | 30.0% |
| !!! | ATTGGTTTTTCCATCCAAAA+AGG | - | chr4.1:8868196-8868215 | None:intergenic | 30.0% |
| AAACCGACCCATGTTATTAT+TGG | + | chr4.1:8869995-8870014 | MS.gene70262:CDS | 35.0% | |
| AAATAAGCTGTCAGCAAAAC+TGG | + | chr4.1:8868980-8868999 | MS.gene70262:CDS | 35.0% | |
| AAGCATACACTGTCAAAATG+AGG | - | chr4.1:8867444-8867463 | None:intergenic | 35.0% | |
| AAGCCTCTATTAAATCTGAC+AGG | + | chr4.1:8870030-8870049 | MS.gene70262:CDS | 35.0% | |
| AAGGTGACTACCTTGTAATA+TGG | + | chr4.1:8867830-8867849 | MS.gene70262:intron | 35.0% | |
| AATATGAGTCTGAAGGCAAA+TGG | + | chr4.1:8866432-8866451 | MS.gene70262:CDS | 35.0% | |
| ACATTGAGATCCACATTTGA+CGG | - | chr4.1:8866379-8866398 | None:intergenic | 35.0% | |
| ACCTTCTACATAGAGTTCAA+AGG | - | chr4.1:8868273-8868292 | None:intergenic | 35.0% | |
| ACTCTCAGCTAGCAATAAAA+AGG | + | chr4.1:8866472-8866491 | MS.gene70262:CDS | 35.0% | |
| ACTTTACAACCCTATCCTAT+GGG | + | chr4.1:8869166-8869185 | MS.gene70262:intron | 35.0% | |
| AGATCTTCAAAAGATATCCG+GGG | + | chr4.1:8867031-8867050 | MS.gene70262:intron | 35.0% | |
| AGCCTCTATTAAATCTGACA+GGG | + | chr4.1:8870031-8870050 | MS.gene70262:CDS | 35.0% | |
| ATAAGGGTCATGCTAAGTTA+AGG | - | chr4.1:8866834-8866853 | None:intergenic | 35.0% | |
| ATCTAGTGGAAAACTGATCA+AGG | + | chr4.1:8869013-8869032 | MS.gene70262:CDS | 35.0% | |
| ATGGAGAAATATGAGTCTGA+AGG | + | chr4.1:8866425-8866444 | MS.gene70262:CDS | 35.0% | |
| ATGTTCCTACATTAACCCAT+AGG | - | chr4.1:8869184-8869203 | None:intergenic | 35.0% | |
| CAAATGTGGATCTCAATGTT+TGG | + | chr4.1:8866380-8866399 | MS.gene70262:intron | 35.0% | |
| CCTTCTACATAGAGTTCAAA+GGG | - | chr4.1:8868272-8868291 | None:intergenic | 35.0% | |
| CTACATTAACCCATAGGATA+GGG | - | chr4.1:8869178-8869197 | None:intergenic | 35.0% | |
| CTCCCTTCCAATAATAACAT+GGG | - | chr4.1:8870005-8870024 | None:intergenic | 35.0% | |
| CTCTCAGCTAGCAATAAAAA+GGG | + | chr4.1:8866473-8866492 | MS.gene70262:CDS | 35.0% | |
| CTTAGTATATCTTGACCCTT+TGG | + | chr4.1:8868706-8868725 | MS.gene70262:intron | 35.0% | |
| CTTCCAATAATAACATGGGT+CGG | - | chr4.1:8870001-8870020 | None:intergenic | 35.0% | |
| GAAAAACCAAAGTCTCACAT+TGG | + | chr4.1:8869381-8869400 | MS.gene70262:intron | 35.0% | |
| GACCCATGTTATTATTGGAA+GGG | + | chr4.1:8870000-8870019 | MS.gene70262:CDS | 35.0% | |
| GAGATCTTCAAAAGATATCC+GGG | + | chr4.1:8867030-8867049 | MS.gene70262:intron | 35.0% | |
| GATCTCAATGTTTGGTTATG+TGG | + | chr4.1:8866388-8866407 | MS.gene70262:intron | 35.0% | |
| TAAAGTCTCGTCTTGTGTAT+TGG | - | chr4.1:8867083-8867102 | None:intergenic | 35.0% | |
| TACAACACATGGTTAAACTC+AGG | - | chr4.1:8866250-8866269 | None:intergenic | 35.0% | |
| TACATCTATACTCACCTAGT+GGG | + | chr4.1:8867909-8867928 | MS.gene70262:intron | 35.0% | |
| TATGTCCTATTCTGCAAACA+AGG | - | chr4.1:8867249-8867268 | None:intergenic | 35.0% | |
| TCAAGCTTCTTTGTGCAAAT+AGG | - | chr4.1:8868612-8868631 | None:intergenic | 35.0% | |
| TCCTCTATCTGAATATGCTT+GGG | - | chr4.1:8869973-8869992 | None:intergenic | 35.0% | |
| TCTATAGCATTCCATTTGGT+TGG | + | chr4.1:8868846-8868865 | MS.gene70262:intron | 35.0% | |
| TGGTTTATTTGGTCGAAATG+CGG | + | chr4.1:8866946-8866965 | MS.gene70262:intron | 35.0% | |
| TTACATCTATACTCACCTAG+TGG | + | chr4.1:8867908-8867927 | MS.gene70262:intron | 35.0% | |
| TTCCTCTATCTGAATATGCT+TGG | - | chr4.1:8869974-8869993 | None:intergenic | 35.0% | |
| TTGTGAATTATCCTTGGAAG+TGG | + | chr4.1:8866996-8867015 | MS.gene70262:intron | 35.0% | |
| ! | AAAAAAAGTGGCTTGTAAGG+AGG | - | chr4.1:8869572-8869591 | None:intergenic | 35.0% |
| ! | AACCTTTTGATAGACCTTTC+CGG | - | chr4.1:8866624-8866643 | None:intergenic | 35.0% |
| ! | AGAGCTAGTTTAGAAGAAGA+AGG | + | chr4.1:8868552-8868571 | MS.gene70262:intron | 35.0% |
| ! | AGCAATATCTAGCTTGAATG+AGG | + | chr4.1:8867506-8867525 | MS.gene70262:CDS | 35.0% |
| ! | ATGAACCTTGTTTGCAGAAT+AGG | + | chr4.1:8867241-8867260 | MS.gene70262:intron | 35.0% |
| ! | CATTTACTCTAAAGAGGTAG+TGG | + | chr4.1:8869347-8869366 | MS.gene70262:intron | 35.0% |
| ! | GGCTTTTTGCAAAAAGATGA+CGG | + | chr4.1:8867115-8867134 | MS.gene70262:intron | 35.0% |
| ! | TATTTTCCGTGATCTGTGAT+TGG | + | chr4.1:8867204-8867223 | MS.gene70262:intron | 35.0% |
| ! | TCAAGGTTTGCTTATGATGT+TGG | + | chr4.1:8866290-8866309 | MS.gene70262:intron | 35.0% |
| ! | TGACTTGTGATTTCCATGAA+TGG | + | chr4.1:8868680-8868699 | MS.gene70262:intron | 35.0% |
| ! | TGGGTTGAGCTTTATATTTC+AGG | + | chr4.1:8869920-8869939 | MS.gene70262:intron | 35.0% |
| !! | AGAGGTAGTGGATTTGTATT+CGG | + | chr4.1:8869359-8869378 | MS.gene70262:intron | 35.0% |
| !! | CGAGTTTTGTGAATTATCCT+TGG | + | chr4.1:8866990-8867009 | MS.gene70262:intron | 35.0% |
| !! | TAACTTCTAAGGCTCTACTT+AGG | - | chr4.1:8869419-8869438 | None:intergenic | 35.0% |
| !!! | TTGGGTGCTATTCTCATTTT+TGG | + | chr4.1:8869872-8869891 | MS.gene70262:intron | 35.0% |
| AAAAACTCGTGCGTGAGATA+AGG | + | chr4.1:8869514-8869533 | MS.gene70262:intron | 40.0% | |
| AAATGTTGGACCGTCAAATG+TGG | + | chr4.1:8866366-8866385 | MS.gene70262:intron | 40.0% | |
| AACACAACATTCATGGACCT+AGG | + | chr4.1:8868223-8868242 | MS.gene70262:intron | 40.0% | |
| AACCCACTCTCAAAAGATAG+GGG | - | chr4.1:8869272-8869291 | None:intergenic | 40.0% | |
| AAGAAAGGCTGAGATAGACT+TGG | + | chr4.1:8870097-8870116 | MS.gene70262:CDS | 40.0% | |
| AAGATAGGGGATGTAAAGAC+AGG | - | chr4.1:8869259-8869278 | None:intergenic | 40.0% | |
| AAGCAATTATGGTGTACGGA+TGG | - | chr4.1:8868501-8868520 | None:intergenic | 40.0% | |
| AATCACAAGTCACAGTAACC+AGG | - | chr4.1:8868672-8868691 | None:intergenic | 40.0% | |
| AATGTTGTGTTTCCGAGGAT+TGG | - | chr4.1:8868214-8868233 | None:intergenic | 40.0% | |
| ACACATGAATAGAAGGCAAG+CGG | + | chr4.1:8868149-8868168 | MS.gene70262:intron | 40.0% | |
| ACACTACTGAACTTGGTTCA+TGG | - | chr4.1:8869471-8869490 | None:intergenic | 40.0% | |
| ACAGAAATGGTCATCAGAAG+AGG | + | chr4.1:8866159-8866178 | MS.gene70262:CDS | 40.0% | |
| ACCCAAGCATATTCAGATAG+AGG | + | chr4.1:8869969-8869988 | MS.gene70262:CDS | 40.0% | |
| ACCCCTGTCAGATTTAATAG+AGG | - | chr4.1:8870036-8870055 | None:intergenic | 40.0% | |
| AGAACACGCTTTCTCATGTT+TGG | + | chr4.1:8868360-8868379 | MS.gene70262:intron | 40.0% | |
| AGAACCCACTCTCAAAAGAT+AGG | - | chr4.1:8869274-8869293 | None:intergenic | 40.0% | |
| AGCAATTATGGTGTACGGAT+GGG | - | chr4.1:8868500-8868519 | None:intergenic | 40.0% | |
| ATAGATCGCATTCTACCACA+AGG | - | chr4.1:8868745-8868764 | None:intergenic | 40.0% | |
| ATAGCAATGTCATGTCTCCT+AGG | - | chr4.1:8868243-8868262 | None:intergenic | 40.0% | |
| ATCGACCGTAATATCCCTAT+TGG | + | chr4.1:8866926-8866945 | MS.gene70262:intron | 40.0% | |
| ATTAGGCAAGCATACTAGCA+AGG | - | chr4.1:8867354-8867373 | None:intergenic | 40.0% | |
| CAAAACTCGATTCCACCAAA+CGG | - | chr4.1:8866979-8866998 | None:intergenic | 40.0% | |
| CAATTCTACGACTGCAAACA+AGG | - | chr4.1:8867997-8868016 | None:intergenic | 40.0% | |
| CACAGTAACCAGGTTTCAAA+AGG | - | chr4.1:8868662-8868681 | None:intergenic | 40.0% | |
| CACTTTACAACCCTATCCTA+TGG | + | chr4.1:8869165-8869184 | MS.gene70262:intron | 40.0% | |
| CAGATTGGACAACCTTATAG+TGG | + | chr4.1:8867482-8867501 | MS.gene70262:intron | 40.0% | |
| CATTTATTACTCCAGTGCAC+AGG | - | chr4.1:8867937-8867956 | None:intergenic | 40.0% | |
| CCATGTTATTATTGGAAGGG+AGG | + | chr4.1:8870003-8870022 | MS.gene70262:CDS | 40.0% | |
| CCCTTTGAACTCTATGTAGA+AGG | + | chr4.1:8868269-8868288 | MS.gene70262:intron | 40.0% | |
| CCTAATTGAAAGACAATCGC+CGG | - | chr4.1:8867290-8867309 | None:intergenic | 40.0% | |
| CCTACATTAACCCATAGGAT+AGG | - | chr4.1:8869179-8869198 | None:intergenic | 40.0% | |
| CCTATGACCTCCATATTACA+AGG | - | chr4.1:8867843-8867862 | None:intergenic | 40.0% | |
| CCTCCCTTCCAATAATAACA+TGG | - | chr4.1:8870006-8870025 | None:intergenic | 40.0% | |
| CCTTGAGATCGATATTTGAG+CGG | - | chr4.1:8866276-8866295 | None:intergenic | 40.0% | |
| CCTTGTAATATGGAGGTCAT+AGG | + | chr4.1:8867840-8867859 | MS.gene70262:intron | 40.0% | |
| CGACCCATGTTATTATTGGA+AGG | + | chr4.1:8869999-8870018 | MS.gene70262:CDS | 40.0% | |
| CGGCGATTGTCTTTCAATTA+GGG | + | chr4.1:8867288-8867307 | MS.gene70262:intron | 40.0% | |
| CTATCTGAATATGCTTGGGT+AGG | - | chr4.1:8869969-8869988 | None:intergenic | 40.0% | |
| CTATTAAATCTGACAGGGGT+GGG | + | chr4.1:8870036-8870055 | MS.gene70262:CDS | 40.0% | |
| GAACCAAGTTCAGTAGTGTT+GGG | + | chr4.1:8869472-8869491 | MS.gene70262:intron | 40.0% | |
| GAACCCACTCTCAAAAGATA+GGG | - | chr4.1:8869273-8869292 | None:intergenic | 40.0% | |
| GATCTTCAAAAGATATCCGG+GGG | + | chr4.1:8867032-8867051 | MS.gene70262:intron | 40.0% | |
| GCCTCTATTAAATCTGACAG+GGG | + | chr4.1:8870032-8870051 | MS.gene70262:CDS | 40.0% | |
| GGAAAGGTCTATCAAAAGGT+TGG | + | chr4.1:8866623-8866642 | MS.gene70262:intron | 40.0% | |
| GGTTTATTTGGTCGAAATGC+GGG | + | chr4.1:8866947-8866966 | MS.gene70262:intron | 40.0% | |
| GTGACTACCTTGTAATATGG+AGG | + | chr4.1:8867833-8867852 | MS.gene70262:intron | 40.0% | |
| TAGAGCCTTAGAAGTTAGCT+TGG | + | chr4.1:8869422-8869441 | MS.gene70262:intron | 40.0% | |
| TAGATCGCATTCTACCACAA+GGG | - | chr4.1:8868744-8868763 | None:intergenic | 40.0% | |
| TATCACCACTTGTGGGATTA+GGG | - | chr4.1:8868441-8868460 | None:intergenic | 40.0% | |
| TATGCTGGAAATTAAGGGTC+CGG | + | chr4.1:8866602-8866621 | MS.gene70262:CDS | 40.0% | |
| TATTAAATCTGACAGGGGTG+GGG | + | chr4.1:8870037-8870056 | MS.gene70262:CDS | 40.0% | |
| TCTATTAAATCTGACAGGGG+TGG | + | chr4.1:8870035-8870054 | MS.gene70262:CDS | 40.0% | |
| TCTCACATTGGCCAGAAATA+AGG | + | chr4.1:8869393-8869412 | MS.gene70262:intron | 40.0% | |
| TGAACCAAGTTCAGTAGTGT+TGG | + | chr4.1:8869471-8869490 | MS.gene70262:intron | 40.0% | |
| TGGATGGAAAAACCAATCCT+CGG | + | chr4.1:8868199-8868218 | MS.gene70262:intron | 40.0% | |
| TTCACTTGTCTTTCAGCACA+TGG | - | chr4.1:8868589-8868608 | None:intergenic | 40.0% | |
| TTGAGCGGATATACAACACA+TGG | - | chr4.1:8866261-8866280 | None:intergenic | 40.0% | |
| TTTGCACAAAGAAGCTTGAG+TGG | + | chr4.1:8868613-8868632 | MS.gene70262:intron | 40.0% | |
| ! | AATAAAAAGGGTGCGTCATC+AGG | + | chr4.1:8866485-8866504 | MS.gene70262:CDS | 40.0% |
| ! | CCTATCCTATGGGTTAATGT+AGG | + | chr4.1:8869176-8869195 | MS.gene70262:intron | 40.0% |
| ! | TCATGTTTGGCCACTTTGTT+TGG | + | chr4.1:8868373-8868392 | MS.gene70262:intron | 40.0% |
| ! | TGTGGGTTGCATAGGATAAA+TGG | + | chr4.1:8866406-8866425 | MS.gene70262:intron | 40.0% |
| ! | TTTGGTTATGTGGGTTGCAT+AGG | + | chr4.1:8866398-8866417 | MS.gene70262:intron | 40.0% |
| !! | AAACTAGCTCTGCTTCATGA+TGG | - | chr4.1:8868543-8868562 | None:intergenic | 40.0% |
| !! | ATCCCCTATCTTTTGAGAGT+GGG | + | chr4.1:8869267-8869286 | MS.gene70262:intron | 40.0% |
| !! | CGGAAAGTGTCAAAAGCAAA+TGG | + | chr4.1:8868316-8868335 | MS.gene70262:intron | 40.0% |
| !! | CTCTACTTAGGCCTTATTTC+TGG | - | chr4.1:8869407-8869426 | None:intergenic | 40.0% |
| AAAGCTGGAGTTGTGAAGCA+TGG | + | chr4.1:8866193-8866212 | MS.gene70262:CDS | 45.0% | |
| AAGACGAGACTTTACCACAG+TGG | + | chr4.1:8867089-8867108 | MS.gene70262:intron | 45.0% | |
| AAGCATACTAGCAAGGAAGC+TGG | - | chr4.1:8867347-8867366 | None:intergenic | 45.0% | |
| AAGGCAAATGGATCATCCTC+CGG | + | chr4.1:8866444-8866463 | MS.gene70262:CDS | 45.0% | |
| ACACCCAACACTACTGAACT+TGG | - | chr4.1:8869478-8869497 | None:intergenic | 45.0% | |
| AGAAGCTGAAGAGGCAACAA+AGG | + | chr4.1:8870205-8870224 | MS.gene70262:CDS | 45.0% | |
| AGATCGCATTCTACCACAAG+GGG | - | chr4.1:8868743-8868762 | None:intergenic | 45.0% | |
| AGGAGGAAAACATGCATGTG+TGG | - | chr4.1:8868476-8868495 | None:intergenic | 45.0% | |
| ATCACCACTTGTGGGATTAG+GGG | - | chr4.1:8868440-8868459 | None:intergenic | 45.0% | |
| ATGCATGTGTGGACTTGACT+GGG | - | chr4.1:8868465-8868484 | None:intergenic | 45.0% | |
| ATGGTCATCAGAAGAGGAAG+CGG | + | chr4.1:8866165-8866184 | MS.gene70262:CDS | 45.0% | |
| ATTAAATCTGACAGGGGTGG+GGG | + | chr4.1:8870038-8870057 | MS.gene70262:CDS | 45.0% | |
| ATTATGGTGTACGGATGGGT+AGG | - | chr4.1:8868496-8868515 | None:intergenic | 45.0% | |
| CACATGAATAGAAGGCAAGC+GGG | + | chr4.1:8868150-8868169 | MS.gene70262:intron | 45.0% | |
| CCATGAATGTTGTGTTTCCG+AGG | - | chr4.1:8868219-8868238 | None:intergenic | 45.0% | |
| CCGCTCAAATATCGATCTCA+AGG | + | chr4.1:8866273-8866292 | MS.gene70262:CDS | 45.0% | |
| CCGGCGATTGTCTTTCAATT+AGG | + | chr4.1:8867287-8867306 | MS.gene70262:intron | 45.0% | |
| CCTCGGAAACACAACATTCA+TGG | + | chr4.1:8868216-8868235 | MS.gene70262:intron | 45.0% | |
| CTCCACCAAGCTAACTTCTA+AGG | - | chr4.1:8869430-8869449 | None:intergenic | 45.0% | |
| CTGGATGATCTTAACACGCT+TGG | - | chr4.1:8867328-8867347 | None:intergenic | 45.0% | |
| GATATCCCCATTTGTAGCAG+AGG | + | chr4.1:8869229-8869248 | MS.gene70262:intron | 45.0% | |
| GGCTGAGATAGACTTGGAAT+TGG | + | chr4.1:8870103-8870122 | MS.gene70262:CDS | 45.0% | |
| GTATCACCACTTGTGGGATT+AGG | - | chr4.1:8868442-8868461 | None:intergenic | 45.0% | |
| GTCCGGAAAGGTCTATCAAA+AGG | + | chr4.1:8866619-8866638 | MS.gene70262:CDS | 45.0% | |
| GTGTTGCCAATCACAGATCA+CGG | - | chr4.1:8867213-8867232 | None:intergenic | 45.0% | |
| TAAGCTGTCAGCAAAACTGG+TGG | + | chr4.1:8868983-8869002 | MS.gene70262:CDS | 45.0% | |
| TGAAGCATGGCGTAGGTAAA+TGG | + | chr4.1:8866206-8866225 | MS.gene70262:CDS | 45.0% | |
| TGGAAATTAAGGGTCCGGAA+AGG | + | chr4.1:8866607-8866626 | MS.gene70262:CDS | 45.0% | |
| TGTAGAAGGTTAACACCCTC+TGG | + | chr4.1:8868283-8868302 | MS.gene70262:intron | 45.0% | |
| TTCTGGCCAATGTGAGACTT+TGG | - | chr4.1:8869390-8869409 | None:intergenic | 45.0% | |
| ! | AGCCTTAGAAGTTAGCTTGG+TGG | + | chr4.1:8869425-8869444 | MS.gene70262:intron | 45.0% |
| ! | CTGGTGGATCTTGTATCTAG+TGG | + | chr4.1:8868999-8869018 | MS.gene70262:CDS | 45.0% |
| ! | GTTGTAAAGTGCACCGATAC+TGG | - | chr4.1:8869156-8869175 | None:intergenic | 45.0% |
| ! | TCTAGCTTGAATGAGGTCGA+TGG | + | chr4.1:8867513-8867532 | MS.gene70262:CDS | 45.0% |
| ! | TTTGTTTGGCGCGGCTTTTA+GGG | + | chr4.1:8868387-8868406 | MS.gene70262:intron | 45.0% |
| !! | CATCCCCTATCTTTTGAGAG+TGG | + | chr4.1:8869266-8869285 | MS.gene70262:intron | 45.0% |
| !! | TGGGTGCTACTAGACAGAAA+TGG | + | chr4.1:8866146-8866165 | MS.gene70262:CDS | 45.0% |
| !!! | ACTCGAAGCCTTTTGAAACC+TGG | + | chr4.1:8868651-8868670 | MS.gene70262:intron | 45.0% |
| AAAAGCCGCGCCAAACAAAG+TGG | - | chr4.1:8868386-8868405 | None:intergenic | 50.0% | |
| AAATGCGGGAAAGCTCCGTT+TGG | + | chr4.1:8866961-8866980 | MS.gene70262:intron | 50.0% | |
| AGAAGCAGAAGCTGATGCAG+CGG | + | chr4.1:8870241-8870260 | MS.gene70262:CDS | 50.0% | |
| AGCTGAAGAGGCAACAAAGG+AGG | + | chr4.1:8870208-8870227 | MS.gene70262:CDS | 50.0% | |
| AGGCAAATGGATCATCCTCC+GGG | + | chr4.1:8866445-8866464 | MS.gene70262:CDS | 50.0% | |
| AGGCCAACCTCTGCTACAAA+TGG | - | chr4.1:8869239-8869258 | None:intergenic | 50.0% | |
| CACTAGTCACAATGAACCCC+CGG | - | chr4.1:8867051-8867070 | None:intergenic | 50.0% | |
| CATGCATGTGTGGACTTGAC+TGG | - | chr4.1:8868466-8868485 | None:intergenic | 50.0% | |
| CGAACCTTGGCACATTGGTA+AGG | + | chr4.1:8867811-8867830 | MS.gene70262:intron | 50.0% | |
| CTTCATCTGCAAGCGAACCT+TGG | + | chr4.1:8867798-8867817 | MS.gene70262:intron | 50.0% | |
| GAGACTTTACCACAGTGGAG+TGG | + | chr4.1:8867094-8867113 | MS.gene70262:intron | 50.0% | |
| GCCAACCTCTGCTACAAATG+GGG | - | chr4.1:8869237-8869256 | None:intergenic | 50.0% | |
| GGCCAACCTCTGCTACAAAT+GGG | - | chr4.1:8869238-8869257 | None:intergenic | 50.0% | |
| GTAGAACCAATACTGCGCAC+CGG | + | chr4.1:8868947-8868966 | MS.gene70262:intron | 50.0% | |
| GTCACCTTACCAATGTGCCA+AGG | - | chr4.1:8867818-8867837 | None:intergenic | 50.0% | |
| TCCCCATTTGTAGCAGAGGT+TGG | + | chr4.1:8869233-8869252 | MS.gene70262:intron | 50.0% | |
| TGCAAAAAGCCACTCCACTG+TGG | - | chr4.1:8867106-8867125 | None:intergenic | 50.0% | |
| TGCATGTGTGGACTTGACTG+GGG | - | chr4.1:8868464-8868483 | None:intergenic | 50.0% | |
| ! | ACAGCTGCTGGTTGTGAGTT+TGG | + | chr4.1:8869695-8869714 | MS.gene70262:intron | 50.0% |
| ! | ACTGGGGTATCACCACTTGT+GGG | - | chr4.1:8868448-8868467 | None:intergenic | 50.0% |
| ! | AGTGCACCGATACTGGTGAT+TGG | - | chr4.1:8869149-8869168 | None:intergenic | 50.0% |
| ! | ATTAGGGGTCGGGGCTTTTA+TGG | - | chr4.1:8868425-8868444 | None:intergenic | 50.0% |
| ! | CAGCTGCTGGTTGTGAGTTT+GGG | + | chr4.1:8869696-8869715 | MS.gene70262:intron | 50.0% |
| ! | CGCTGCTAAGCCTTTTTGGA+TGG | + | chr4.1:8868183-8868202 | MS.gene70262:intron | 50.0% |
| ! | GGGGCATTTGAAGCACCAAA+GGG | - | chr4.1:8868724-8868743 | None:intergenic | 50.0% |
| ! | TGCTGCTTAGATACAGCTGC+TGG | + | chr4.1:8869683-8869702 | MS.gene70262:intron | 50.0% |
| ! | TTTGGCCACTTTGTTTGGCG+CGG | + | chr4.1:8868378-8868397 | MS.gene70262:intron | 50.0% |
| !! | AGGGGCATTTGAAGCACCAA+AGG | - | chr4.1:8868725-8868744 | None:intergenic | 50.0% |
| !! | CTTTGTTTGGCGCGGCTTTT+AGG | + | chr4.1:8868386-8868405 | MS.gene70262:intron | 50.0% |
| AATCTGCCGGTGCGCAGTAT+TGG | - | chr4.1:8868956-8868975 | None:intergenic | 55.0% | |
| ACTTGTGGGATTAGGGGTCG+GGG | - | chr4.1:8868434-8868453 | None:intergenic | 55.0% | |
| AGAGGCAACAAAGGAGGCAG+AGG | + | chr4.1:8870214-8870233 | MS.gene70262:CDS | 55.0% | |
| ATGGTGTACGGATGGGTAGG+AGG | - | chr4.1:8868493-8868512 | None:intergenic | 55.0% | |
| CAAGCGAAGAGGCTGTTGCA+AGG | - | chr4.1:8867873-8867892 | None:intergenic | 55.0% | |
| CACTTGTGGGATTAGGGGTC+GGG | - | chr4.1:8868435-8868454 | None:intergenic | 55.0% | |
| CCACTTGTGGGATTAGGGGT+CGG | - | chr4.1:8868436-8868455 | None:intergenic | 55.0% | |
| CTCTTCAGCTTCTGCCATGG+CGG | - | chr4.1:8870198-8870217 | None:intergenic | 55.0% | |
| GCAAGCGAACCTTGGCACAT+TGG | + | chr4.1:8867806-8867825 | MS.gene70262:intron | 55.0% | |
| GGAGTTGTGAAGCATGGCGT+AGG | + | chr4.1:8866199-8866218 | MS.gene70262:CDS | 55.0% | |
| GGCAAATGGATCATCCTCCG+GGG | + | chr4.1:8866446-8866465 | MS.gene70262:CDS | 55.0% | |
| GGTGCTTCAAATGCCCCTTG+TGG | + | chr4.1:8868727-8868746 | MS.gene70262:intron | 55.0% | |
| GGTTAACACCCTCTGGTGCT+AGG | + | chr4.1:8868290-8868309 | MS.gene70262:intron | 55.0% | |
| TGCAACAGCCTCTTCGCTTG+CGG | + | chr4.1:8867873-8867892 | MS.gene70262:intron | 55.0% | |
| TGCCTCTTCAGCTTCTGCCA+TGG | - | chr4.1:8870201-8870220 | None:intergenic | 55.0% | |
| TGCTAGCTGAGAGTTGTCCC+CGG | - | chr4.1:8866466-8866485 | None:intergenic | 55.0% | |
| TTCCGCTTCCTAGCACCAGA+GGG | - | chr4.1:8868301-8868320 | None:intergenic | 55.0% | |
| TTTCCGCTTCCTAGCACCAG+AGG | - | chr4.1:8868302-8868321 | None:intergenic | 55.0% | |
| ! | GACTGGGGTATCACCACTTG+TGG | - | chr4.1:8868449-8868468 | None:intergenic | 55.0% |
| ! | GCTGCGCTGCTAAGCCTTTT+TGG | + | chr4.1:8868179-8868198 | MS.gene70262:intron | 55.0% |
| ACGGAGTCGTCACGCTGTTC+TGG | - | chr4.1:8866513-8866532 | None:intergenic | 60.0% | |
| AGAACAGCGTGACGACTCCG+TGG | + | chr4.1:8866512-8866531 | MS.gene70262:CDS | 60.0% | |
| CCGACCCCTAATCCCACAAG+TGG | + | chr4.1:8868433-8868452 | MS.gene70262:intron | 60.0% | |
| CCTCTTCGCTTGCGGGTGTA+AGG | + | chr4.1:8867881-8867900 | MS.gene70262:intron | 60.0% | |
| CCTTACACCCGCAAGCGAAG+AGG | - | chr4.1:8867884-8867903 | None:intergenic | 60.0% | |
| CGCCATGGCAGAAGCTGAAG+AGG | + | chr4.1:8870196-8870215 | MS.gene70262:CDS | 60.0% | |
| GAGGAAGCGGCTCTCAAAGC+TGG | + | chr4.1:8866178-8866197 | MS.gene70262:CDS | 60.0% | |
| GCAACAGCCTCTTCGCTTGC+GGG | + | chr4.1:8867874-8867893 | MS.gene70262:intron | 60.0% | |
| TAGCTGAGAGTTGTCCCCGG+AGG | - | chr4.1:8866463-8866482 | None:intergenic | 60.0% | |
| TGCGGGAAAGCTCCGTTTGG+TGG | + | chr4.1:8866964-8866983 | MS.gene70262:intron | 60.0% | |
| TGCTGAAGCAGAAGCCGCCA+TGG | + | chr4.1:8870181-8870200 | MS.gene70262:CDS | 60.0% | |
| ! | CACCCTCTGGTGCTAGGAAG+CGG | + | chr4.1:8868296-8868315 | MS.gene70262:intron | 60.0% |
| ! | GGGGTCGGGGCTTTTATGGT+AGG | - | chr4.1:8868421-8868440 | None:intergenic | 60.0% |
| CCAGTGCACAGGCTCCCACT+AGG | - | chr4.1:8867926-8867945 | None:intergenic | 65.0% | |
| CCTAGTGGGAGCCTGTGCAC+TGG | + | chr4.1:8867923-8867942 | MS.gene70262:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 8866145 | 8870310 | 8866145 | ID=MS.gene70262 |
| chr4.1 | mRNA | 8866145 | 8870310 | 8866145 | ID=MS.gene70262.t1;Parent=MS.gene70262 |
| chr4.1 | exon | 8866145 | 8866294 | 8866145 | ID=MS.gene70262.t1.exon1;Parent=MS.gene70262.t1 |
| chr4.1 | CDS | 8866145 | 8866294 | 8866145 | ID=cds.MS.gene70262.t1;Parent=MS.gene70262.t1 |
| chr4.1 | exon | 8866420 | 8866640 | 8866420 | ID=MS.gene70262.t1.exon2;Parent=MS.gene70262.t1 |
| chr4.1 | CDS | 8866420 | 8866640 | 8866420 | ID=cds.MS.gene70262.t1;Parent=MS.gene70262.t1 |
| chr4.1 | exon | 8867485 | 8867569 | 8867485 | ID=MS.gene70262.t1.exon3;Parent=MS.gene70262.t1 |
| chr4.1 | CDS | 8867485 | 8867569 | 8867485 | ID=cds.MS.gene70262.t1;Parent=MS.gene70262.t1 |
| chr4.1 | exon | 8868951 | 8869034 | 8868951 | ID=MS.gene70262.t1.exon4;Parent=MS.gene70262.t1 |
| chr4.1 | CDS | 8868951 | 8869034 | 8868951 | ID=cds.MS.gene70262.t1;Parent=MS.gene70262.t1 |
| chr4.1 | exon | 8869942 | 8870310 | 8869942 | ID=MS.gene70262.t1.exon5;Parent=MS.gene70262.t1 |
| chr4.1 | CDS | 8869942 | 8870310 | 8869942 | ID=cds.MS.gene70262.t1;Parent=MS.gene70262.t1 |
| Gene Sequence |
| Protein sequence |
