Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70390.t1 | XP_013457215.2 | 92.5 | 388 | 21 | 3 | 7 | 392 | 1 | 382 | 3.40E-149 | 538.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70390.t1 | A0A396IAU5 | 92.5 | 388 | 21 | 3 | 7 | 392 | 1 | 382 | 2.4e-149 | 538.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene70390.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70390.t1 | MTR_4g094292 | 88.773 | 383 | 35 | 3 | 12 | 392 | 1 | 377 | 0.0 | 636 |
| MS.gene70390.t1 | MTR_4g094298 | 71.739 | 92 | 22 | 3 | 303 | 390 | 9 | 100 | 1.66e-36 | 129 |
| MS.gene70390.t1 | MTR_4g094358 | 72.727 | 66 | 16 | 1 | 303 | 366 | 9 | 74 | 4.09e-24 | 97.4 |
| MS.gene70390.t1 | MTR_6g033835 | 77.778 | 36 | 8 | 0 | 114 | 149 | 72 | 107 | 7.93e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 119 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATTCAATTCTCCGATTTA+TGG | 0.116513 | 4.3:-20082764 | MS.gene70390:CDS |
| GCTTTCTTCAATTGAGAATT+TGG | 0.178850 | 4.3:-20082642 | MS.gene70390:CDS |
| TACCTCAGATTTACTCTTCA+TGG | 0.246210 | 4.3:+20079174 | None:intergenic |
| TCAGTTACTTCAGCGGTTTC+AGG | 0.298068 | 4.3:+20078854 | None:intergenic |
| TCAGCTACTTCAGCGGATTC+AGG | 0.301044 | 4.3:+20078968 | None:intergenic |
| GCATGAGTGCGATGAGGTTC+AGG | 0.301934 | 4.3:+20078899 | None:intergenic |
| CCGTACTCCGGCAACAGTTC+AGG | 0.302302 | 4.3:-20082710 | MS.gene70390:CDS |
| TATTGTGATGGATGATATTC+AGG | 0.326560 | 4.3:-20082558 | MS.gene70390:CDS |
| ACAGGGGTACGATGAGATTC+AGG | 0.375993 | 4.3:+20078782 | None:intergenic |
| TCAGGAACAATGCGGCTATC+CGG | 0.378472 | 4.3:+20078872 | None:intergenic |
| AGGTTCAGGGGAAGCTGGTT+GGG | 0.378719 | 4.3:+20078913 | None:intergenic |
| GGAACTCTGTCTGAACCATT+TGG | 0.381458 | 4.3:+20078701 | None:intergenic |
| CTGTTCTTTCCTCCTGACAT+TGG | 0.382703 | 4.3:+20082530 | None:intergenic |
| TCAGGAACAATGCGGCTATC+CGG | 0.382821 | 4.3:+20078986 | None:intergenic |
| CTGGACTCATCGTTGTTGAT+TGG | 0.383003 | 4.3:+20082891 | None:intergenic |
| GCGGGAACAAACCTGGCATT+TGG | 0.389416 | 4.3:+20082361 | None:intergenic |
| GCCGAGAACTTCGACGTTAC+CGG | 0.389780 | 4.3:-20082851 | MS.gene70390:CDS |
| TGAAGAAGGTTTCCAAGTTA+AGG | 0.391044 | 4.3:-20082979 | MS.gene70390:CDS |
| TCCGCTGAAGTAGCTGAATC+TGG | 0.412882 | 4.3:-20078962 | MS.gene70390:CDS |
| CTGATGGTGTTGGGATTGAC+AGG | 0.416902 | 4.3:+20078764 | None:intergenic |
| TGCAGAGCATGGGAGGAATC+TGG | 0.420303 | 4.3:-20082401 | MS.gene70390:CDS |
| CTCGTTCGAAGTCCTTAACT+TGG | 0.422674 | 4.3:+20082967 | None:intergenic |
| GAACTCTGTCTGAACCATTT+GGG | 0.424835 | 4.3:+20078702 | None:intergenic |
| CTTTATTGTGTAGGCACAGA+TGG | 0.426300 | 4.3:-20079047 | MS.gene70390:intron |
| GCCGGTAACGTCGAAGTTCT+CGG | 0.438838 | 4.3:+20082850 | None:intergenic |
| TCTTCTTCTTCTTCCGGTAG+AGG | 0.439147 | 4.3:-20082479 | MS.gene70390:CDS |
| GCGGCGTAGGGTTGAAAACC+TGG | 0.445857 | 4.3:+20082872 | None:intergenic |
| TACTTACTGGAGCCATAAAT+CGG | 0.446103 | 4.3:+20082752 | None:intergenic |
| AGATTCAGGCGAAGTTGGTT+GGG | 0.446519 | 4.3:+20078796 | None:intergenic |
| CTTAAACAACACACTCTTCG+AGG | 0.446531 | 4.3:+20082433 | None:intergenic |
| CAGGAACAATGCGGCTATCC+GGG | 0.448018 | 4.3:+20078873 | None:intergenic |
| AACAATGCGGCTATCCGGGC+TGG | 0.449752 | 4.3:+20078877 | None:intergenic |
| CGATGAGATTCAGGCGAAGT+TGG | 0.457573 | 4.3:+20078791 | None:intergenic |
| CAGCCTCAATGCCATCATCC+AGG | 0.459441 | 4.3:+20078729 | None:intergenic |
| AGAAGGAGGTTTGCAGAGCA+TGG | 0.460342 | 4.3:-20082412 | MS.gene70390:CDS |
| CCTGAACTGTTGCCGGAGTA+CGG | 0.462019 | 4.3:+20082710 | None:intergenic |
| ATTGAGGCTGTCCTCCCAAA+TGG | 0.462042 | 4.3:-20078716 | MS.gene70390:CDS |
| CTCTTCATGGAGAGACGACT+TGG | 0.464197 | 4.3:+20079187 | None:intergenic |
| GAGTGTGTTGTTTAAGAAGG+AGG | 0.464562 | 4.3:-20082426 | MS.gene70390:CDS |
| TGACCAGTCGCTGATGGTGT+TGG | 0.464996 | 4.3:+20078754 | None:intergenic |
| CAGGAACAATGCGGCTATCC+GGG | 0.468329 | 4.3:+20078987 | None:intergenic |
| GAGATTCAGGCGAAGTTGGT+TGG | 0.470052 | 4.3:+20078795 | None:intergenic |
| AGCAAGCTGCGACGGCGAGC+CGG | 0.471289 | 4.3:+20082832 | None:intergenic |
| AGTGTTTGCGGCACTTTGCG+AGG | 0.476892 | 4.3:-20078609 | MS.gene70390:CDS |
| GACCAGTCGCTGATGGTGTT+GGG | 0.478745 | 4.3:+20078755 | None:intergenic |
| TCACTGGATTTAGCAGAAAT+CGG | 0.480187 | 4.3:+20082788 | None:intergenic |
| GTGTTTGCGGCACTTTGCGA+GGG | 0.482529 | 4.3:-20078608 | MS.gene70390:CDS |
| TCGAAGTTCTCGGCGGCGTA+GGG | 0.488149 | 4.3:+20082860 | None:intergenic |
| GAGGTTCAGGGGAAGCTGGT+TGG | 0.489551 | 4.3:+20078912 | None:intergenic |
| AAGAAGACTACCAGTGTTTG+CGG | 0.493423 | 4.3:-20078621 | MS.gene70390:CDS |
| CGGAGAATTGAATGAGTCAC+TGG | 0.498104 | 4.3:+20082772 | None:intergenic |
| CGATGAGGTTCAGGGGAAGC+TGG | 0.498810 | 4.3:+20078908 | None:intergenic |
| GATGTATCAAACGCCGGTGA+AGG | 0.504339 | 4.3:-20082594 | MS.gene70390:CDS |
| GATGAAGCTCTTCTCTTCCG+TGG | 0.504434 | 4.3:+20079209 | None:intergenic |
| GAAGAGTGTGTTGTTTAAGA+AGG | 0.506801 | 4.3:-20082429 | MS.gene70390:CDS |
| CATGAGTGCGATGAGGTTCA+GGG | 0.509014 | 4.3:+20078900 | None:intergenic |
| GACTGGTCACCCCTGGATGA+TGG | 0.509897 | 4.3:-20078740 | MS.gene70390:CDS |
| CGTACTCCGGCAACAGTTCA+GGG | 0.510086 | 4.3:-20082709 | MS.gene70390:CDS |
| GTCGAAGTTCTCGGCGGCGT+AGG | 0.512563 | 4.3:+20082859 | None:intergenic |
| GAAGGAGGTTTGCAGAGCAT+GGG | 0.513507 | 4.3:-20082411 | MS.gene70390:CDS |
| TCATCCAACTCGATCATCAA+TGG | 0.518876 | 4.3:+20082935 | None:intergenic |
| CATCAGCGACTGGTCACCCC+TGG | 0.525662 | 4.3:-20078747 | MS.gene70390:CDS |
| GGAAGATGAAGAGCCTCTAC+CGG | 0.530743 | 4.3:+20082466 | None:intergenic |
| CTTGCAAGTCTTGTGACTAA+AGG | 0.531988 | 4.3:+20078938 | None:intergenic |
| ATTCAGGTGAGGCCAATGTC+AGG | 0.532076 | 4.3:-20082542 | MS.gene70390:CDS |
| ATGAAGCTCTTCTCTTCCGT+GGG | 0.538111 | 4.3:+20079210 | None:intergenic |
| GTTCAGACAGAGTTCCCTCT+AGG | 0.542921 | 4.3:-20078694 | MS.gene70390:CDS |
| GGAGGTTTGCAGAGCATGGG+AGG | 0.543989 | 4.3:-20082408 | MS.gene70390:CDS |
| TTTATGGCTCCAGTAAGTAC+AGG | 0.546704 | 4.3:-20082748 | MS.gene70390:CDS |
| TCATCGCACTCATGCCAGCC+CGG | 0.549587 | 4.3:-20078891 | MS.gene70390:CDS |
| CCGCTATGACTCCAAATGCC+AGG | 0.551499 | 4.3:-20082372 | MS.gene70390:intron |
| TTCGCCATTGATGATCGAGT+TGG | 0.551669 | 4.3:-20082939 | MS.gene70390:CDS |
| AAGTATTTAGCAAGCTGCGA+CGG | 0.553986 | 4.3:+20082824 | None:intergenic |
| CAGGGGTGACCAGTCGCTGA+TGG | 0.559234 | 4.3:+20078748 | None:intergenic |
| AGCCTCAATGCCATCATCCA+GGG | 0.563569 | 4.3:+20078730 | None:intergenic |
| CAATCAACAACGATGAGTCC+AGG | 0.566783 | 4.3:-20082890 | MS.gene70390:CDS |
| GAACAACAGCAAGATGAAGA+AGG | 0.574444 | 4.3:-20082993 | MS.gene70390:CDS |
| TTTATTGTGTAGGCACAGAT+GGG | 0.575555 | 4.3:-20079046 | MS.gene70390:intron |
| AGCTGATTCAGTTACTTCAG+CGG | 0.577232 | 4.3:+20078847 | None:intergenic |
| TACTCCGGCAACAGTTCAGG+GGG | 0.579941 | 4.3:-20082707 | MS.gene70390:CDS |
| TCGCAAAGTGCCGCAAACAC+TGG | 0.580686 | 4.3:+20078611 | None:intergenic |
| AAATTCTCAATTGAAGAAAG+CGG | 0.583951 | 4.3:+20082644 | None:intergenic |
| ATGTATCAAACGCCGGTGAA+GGG | 0.585801 | 4.3:-20082593 | MS.gene70390:CDS |
| TTCAGACAGAGTTCCCTCTA+GGG | 0.586505 | 4.3:-20078693 | MS.gene70390:CDS |
| ACTCTTCGAGGACGAAGAAG+AGG | 0.590723 | 4.3:+20082445 | None:intergenic |
| ATCCCAACACCATCAGCGAC+TGG | 0.592240 | 4.3:-20078757 | MS.gene70390:CDS |
| GCTGAAGTAACTGAATCAGC+TGG | 0.597625 | 4.3:-20078845 | MS.gene70390:CDS |
| ACCCCTGGATGATGGCATTG+AGG | 0.599820 | 4.3:-20078732 | MS.gene70390:CDS |
| ACTTCCTCACCACCCTTCAC+CGG | 0.613181 | 4.3:+20082581 | None:intergenic |
| GCATCAACTTCCTCCCTAGA+GGG | 0.614358 | 4.3:+20078680 | None:intergenic |
| CTCTGTCTGAACCATTTGGG+AGG | 0.615742 | 4.3:+20078705 | None:intergenic |
| CTCCATGAAGAGTAAATCTG+AGG | 0.616657 | 4.3:-20079176 | MS.gene70390:intron |
| AACGCCGGTGAAGGGTGGTG+AGG | 0.621390 | 4.3:-20082585 | MS.gene70390:CDS |
| TGCATCAACTTCCTCCCTAG+AGG | 0.621656 | 4.3:+20078679 | None:intergenic |
| TGTTTGCGGCACTTTGCGAG+GGG | 0.624671 | 4.3:-20078607 | MS.gene70390:CDS |
| AGGACTGTGCTTGTATGACC+CGG | 0.627217 | 4.3:-20079005 | MS.gene70390:CDS |
| TATCAAACGCCGGTGAAGGG+TGG | 0.628960 | 4.3:-20082590 | MS.gene70390:CDS |
| TGGTGAGGAAGTTATTGTGA+TGG | 0.633081 | 4.3:-20082570 | MS.gene70390:CDS |
| TCCAGATTCAGCTACTTCAG+CGG | 0.639551 | 4.3:+20078961 | None:intergenic |
| AGACAGAGTTCCCTCTAGGG+AGG | 0.648644 | 4.3:-20078690 | MS.gene70390:CDS |
| GCCTCAATGCCATCATCCAG+GGG | 0.652087 | 4.3:+20078731 | None:intergenic |
| TGATGGTGTTGGGATTGACA+GGG | 0.653379 | 4.3:+20078765 | None:intergenic |
| GTACTCCGGCAACAGTTCAG+GGG | 0.653779 | 4.3:-20082708 | MS.gene70390:CDS |
| GCCGCGGATGTATCAAACGC+CGG | 0.663612 | 4.3:-20082600 | MS.gene70390:CDS |
| AATAATAGCTTCAGTTCTCG+CGG | 0.664385 | 4.3:-20082683 | MS.gene70390:CDS |
| ATGAGTGCGATGAGGTTCAG+GGG | 0.671572 | 4.3:+20078901 | None:intergenic |
| GGGCTGGCATGAGTGCGATG+AGG | 0.673771 | 4.3:+20078893 | None:intergenic |
| CAGGTGAGGCCAATGTCAGG+AGG | 0.674041 | 4.3:-20082539 | MS.gene70390:CDS |
| ACCGGCGTTTGATACATCCG+CGG | 0.676422 | 4.3:+20082599 | None:intergenic |
| AGAAGCAGCTCTCGTCGCCG+CGG | 0.683033 | 4.3:-20082616 | MS.gene70390:CDS |
| GAACTGTTGCCGGAGTACGG+TGG | 0.688179 | 4.3:+20082713 | None:intergenic |
| GATGGTGTTGGGATTGACAG+GGG | 0.706471 | 4.3:+20078766 | None:intergenic |
| CCTGGCATTTGGAGTCATAG+CGG | 0.709847 | 4.3:+20082372 | None:intergenic |
| ATCGAGTTGGATGATAACAG+AGG | 0.715067 | 4.3:-20082926 | MS.gene70390:CDS |
| CAGCGGTTTCAGGAACAATG+CGG | 0.725745 | 4.3:+20078864 | None:intergenic |
| TGATGGATGATATTCAGGTG+AGG | 0.744981 | 4.3:-20082553 | MS.gene70390:CDS |
| CAGCGGATTCAGGAACAATG+CGG | 0.756023 | 4.3:+20078978 | None:intergenic |
| GGTAACGTCGAAGTTCTCGG+CGG | 0.777146 | 4.3:+20082853 | None:intergenic |
| ACTCCGGCAACAGTTCAGGG+GGG | 0.786022 | 4.3:-20082706 | MS.gene70390:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAAGTAAATAAAAAAG+TGG | - | chr4.3:20081938-20081957 | MS.gene70390:intron | 10.0% |
| !! | TACAACTTATTAAAATTATT+TGG | - | chr4.3:20081730-20081749 | MS.gene70390:intron | 10.0% |
| !! | TATCTTATTAAATTTGATAT+AGG | + | chr4.3:20080981-20081000 | None:intergenic | 10.0% |
| !!! | AAAAACTTTTGATTTTATTT+AGG | - | chr4.3:20079395-20079414 | MS.gene70390:intron | 10.0% |
| !!! | AAAACTTTTGATTTTATTTA+GGG | - | chr4.3:20079396-20079415 | MS.gene70390:intron | 10.0% |
| !!! | TTTATCTTTTGTTATAAAAA+TGG | - | chr4.3:20081759-20081778 | MS.gene70390:intron | 10.0% |
| !! | ATAGAACAAATTTAAATCAT+TGG | - | chr4.3:20081036-20081055 | MS.gene70390:intron | 15.0% |
| !! | GATGATTGTAATTAAAATTT+GGG | + | chr4.3:20080850-20080869 | None:intergenic | 15.0% |
| !! | TAAAGAAAATTAAGAAGTAA+AGG | + | chr4.3:20081225-20081244 | None:intergenic | 15.0% |
| !! | TAAGAAAGAATATATTAAGA+TGG | - | chr4.3:20080431-20080450 | MS.gene70390:intron | 15.0% |
| !! | TGATGATTGTAATTAAAATT+TGG | + | chr4.3:20080851-20080870 | None:intergenic | 15.0% |
| !! | TGTCTATTTAAATTAGAATT+AGG | + | chr4.3:20081084-20081103 | None:intergenic | 15.0% |
| !!! | TAATGGAATATTTCTATTTT+AGG | + | chr4.3:20079461-20079480 | None:intergenic | 15.0% |
| !!! | TATGATTAAGATAATTTTTG+TGG | - | chr4.3:20082156-20082175 | MS.gene70390:intron | 15.0% |
| !! | AAGTCAATAATATCTTATAC+AGG | + | chr4.3:20082308-20082327 | None:intergenic | 20.0% |
| !! | AGAATTGTATTCATCTTAAT+TGG | - | chr4.3:20079372-20079391 | MS.gene70390:intron | 20.0% |
| !! | ATAAATATTCCATTTCCATT+AGG | - | chr4.3:20079721-20079740 | MS.gene70390:intron | 20.0% |
| !! | ATTTAACCATTTATCCAAAT+AGG | - | chr4.3:20081830-20081849 | MS.gene70390:intron | 20.0% |
| !! | CATTGAATTCATAATAGTTA+TGG | + | chr4.3:20079278-20079297 | None:intergenic | 20.0% |
| !!! | AACGAAAATAGATTGTATTT+TGG | - | chr4.3:20081110-20081129 | MS.gene70390:intron | 20.0% |
| !!! | TAAGATATTATTGACTTCTA+TGG | - | chr4.3:20082311-20082330 | MS.gene70390:intron | 20.0% |
| !!! | TTTTAGATTTAGCATTTGTT+TGG | - | chr4.3:20079968-20079987 | MS.gene70390:intron | 20.0% |
| ! | AAAACACAATTTGCAAACAA+GGG | - | chr4.3:20079780-20079799 | MS.gene70390:intron | 25.0% |
| ! | AAATCAGAATAACCTATACA+TGG | + | chr4.3:20080571-20080590 | None:intergenic | 25.0% |
| ! | AAATTACTTTCCCAAAAACA+AGG | - | chr4.3:20080631-20080650 | MS.gene70390:intron | 25.0% |
| ! | AAATTCTCAATTGAAGAAAG+CGG | + | chr4.3:20078973-20078992 | None:intergenic | 25.0% |
| ! | ACTTATAGCATAAGTTCTTA+TGG | + | chr4.3:20081805-20081824 | None:intergenic | 25.0% |
| ! | AGATTCTTAATCAAACTATC+TGG | + | chr4.3:20081452-20081471 | None:intergenic | 25.0% |
| ! | ATGCACTTAATAGTTAATAC+AGG | + | chr4.3:20079619-20079638 | None:intergenic | 25.0% |
| ! | CAAACAAACTGACTATAAAT+TGG | - | chr4.3:20080307-20080326 | MS.gene70390:intron | 25.0% |
| ! | CATAATAAACACCTAATTAG+CGG | - | chr4.3:20082499-20082518 | MS.gene70390:CDS | 25.0% |
| ! | GATAGTTTGATTAAGAATCT+TGG | - | chr4.3:20081452-20081471 | MS.gene70390:intron | 25.0% |
| ! | GTTGAATGCACAAATATTAA+TGG | + | chr4.3:20079478-20079497 | None:intergenic | 25.0% |
| ! | TAAAACACAATTTGCAAACA+AGG | - | chr4.3:20079779-20079798 | MS.gene70390:intron | 25.0% |
| ! | TCTGTAGAATTGTATATTGA+GGG | - | chr4.3:20081536-20081555 | MS.gene70390:intron | 25.0% |
| ! | TGAATTCATAATAGTTATGG+CGG | + | chr4.3:20079275-20079294 | None:intergenic | 25.0% |
| ! | TTAACTATTAAGTGCATGTT+TGG | - | chr4.3:20079622-20079641 | MS.gene70390:intron | 25.0% |
| ! | TTAGGTGTTTATTATGCTTA+AGG | + | chr4.3:20082495-20082514 | None:intergenic | 25.0% |
| !! | AATTCAATGATTCCTGTTTT+TGG | - | chr4.3:20079289-20079308 | MS.gene70390:intron | 25.0% |
| !! | ATTTCATGGAGCAATAATTT+TGG | - | chr4.3:20080732-20080751 | MS.gene70390:intron | 25.0% |
| !! | CACAAGTTTCTTGTTTAATT+GGG | - | chr4.3:20080513-20080532 | MS.gene70390:intron | 25.0% |
| !! | GTATAGGTTATTCTGATTTT+GGG | - | chr4.3:20080572-20080591 | MS.gene70390:intron | 25.0% |
| !! | TCAATGTAGAAACTTTTTGT+TGG | + | chr4.3:20079539-20079558 | None:intergenic | 25.0% |
| !! | TCACAAGTTTCTTGTTTAAT+TGG | - | chr4.3:20080512-20080531 | MS.gene70390:intron | 25.0% |
| !! | TGTATAGGTTATTCTGATTT+TGG | - | chr4.3:20080571-20080590 | MS.gene70390:intron | 25.0% |
| !! | TTAGCATTTGTTTGGAATTA+CGG | - | chr4.3:20079976-20079995 | MS.gene70390:intron | 25.0% |
| !!! | AAATTGTGTTTTAGTCCTTT+GGG | + | chr4.3:20079772-20079791 | None:intergenic | 25.0% |
| !!! | GCATTTTTTCTTTATTGTGT+AGG | - | chr4.3:20082558-20082577 | MS.gene70390:CDS | 25.0% |
| !!! | TAGTAAATTTGCTGAAATCA+CGG | + | chr4.3:20079681-20079700 | None:intergenic | 25.0% |
| !!! | TGGTTGTTTTAAAAATTACG+AGG | - | chr4.3:20080451-20080470 | MS.gene70390:intron | 25.0% |
| !!! | TGTTGTTTCATTATAAACCT+AGG | - | chr4.3:20080655-20080674 | MS.gene70390:intron | 25.0% |
| !!! | TTGTTTTTGGGAAAGTAATT+TGG | + | chr4.3:20080632-20080651 | None:intergenic | 25.0% |
| AAAAAGTGGCATAGAATGAT+AGG | - | chr4.3:20081952-20081971 | MS.gene70390:intron | 30.0% | |
| AAAAGTGGCATAGAATGATA+GGG | - | chr4.3:20081953-20081972 | MS.gene70390:intron | 30.0% | |
| ACATTACAGTTAGTGAGTTA+TGG | - | chr4.3:20082070-20082089 | MS.gene70390:intron | 30.0% | |
| ATCTTATCACAGAACATCTA+TGG | - | chr4.3:20082263-20082282 | MS.gene70390:intron | 30.0% | |
| ATGACACTGTAACTAATTGA+TGG | - | chr4.3:20082036-20082055 | MS.gene70390:intron | 30.0% | |
| ATTAGGCTGTAGTTGTTTAA+AGG | - | chr4.3:20079738-20079757 | MS.gene70390:intron | 30.0% | |
| CTCTGTAGAATTGTATATTG+AGG | - | chr4.3:20081535-20081554 | MS.gene70390:intron | 30.0% | |
| GAAATACTTAACCGCTAATT+AGG | + | chr4.3:20082513-20082532 | None:intergenic | 30.0% | |
| GAATTCATAATAGTTATGGC+GGG | + | chr4.3:20079274-20079293 | None:intergenic | 30.0% | |
| GATCATATATCGCACTTTAT+AGG | + | chr4.3:20080149-20080168 | None:intergenic | 30.0% | |
| GCTTTCTTCAATTGAGAATT+TGG | - | chr4.3:20078972-20078991 | MS.gene70390:CDS | 30.0% | |
| GTATAGAACTATAGATGTCA+AGG | + | chr4.3:20081248-20081267 | None:intergenic | 30.0% | |
| GTGATTTCAGCAAATTTACT+AGG | - | chr4.3:20079680-20079699 | MS.gene70390:intron | 30.0% | |
| GTGTTAGGCTTTCTATATAA+GGG | - | chr4.3:20082109-20082128 | MS.gene70390:intron | 30.0% | |
| GTTTATTATGCTTAAGGACA+AGG | + | chr4.3:20082489-20082508 | None:intergenic | 30.0% | |
| TATCCAGCAATTCAACATTT+AGG | + | chr4.3:20081857-20081876 | None:intergenic | 30.0% | |
| TATTGCTCCATGAAATTAAC+CGG | + | chr4.3:20080728-20080747 | None:intergenic | 30.0% | |
| TCATTCAATTCTCCGATTTA+TGG | - | chr4.3:20078850-20078869 | MS.gene70390:CDS | 30.0% | |
| TGTAGTTATGCAGAATTCTA+TGG | - | chr4.3:20081642-20081661 | MS.gene70390:intron | 30.0% | |
| TGTGTTAGGCTTTCTATATA+AGG | - | chr4.3:20082108-20082127 | MS.gene70390:intron | 30.0% | |
| TTAACCAGACTATGATACTA+GGG | - | chr4.3:20081413-20081432 | MS.gene70390:intron | 30.0% | |
| TTAGGTCCTATTTGGATAAA+TGG | + | chr4.3:20081839-20081858 | None:intergenic | 30.0% | |
| TTCAACATTTAGGTCCTATT+TGG | + | chr4.3:20081847-20081866 | None:intergenic | 30.0% | |
| TTCTATATAAGGGAGTCATA+AGG | - | chr4.3:20082119-20082138 | MS.gene70390:intron | 30.0% | |
| TTGTATATTGAGGGTCTATT+TGG | - | chr4.3:20081545-20081564 | MS.gene70390:intron | 30.0% | |
| TTTAAACAACTACAGCCTAA+TGG | + | chr4.3:20079739-20079758 | None:intergenic | 30.0% | |
| TTTGGGAAAGTAATTTGGTT+TGG | + | chr4.3:20080627-20080646 | None:intergenic | 30.0% | |
| ! | AAATTGCGTTTAGAAAGCAT+TGG | - | chr4.3:20080054-20080073 | MS.gene70390:intron | 30.0% |
| ! | ACTATTTAGAGACCTTTTCT+TGG | - | chr4.3:20079823-20079842 | MS.gene70390:intron | 30.0% |
| ! | CTATTTAGAGACCTTTTCTT+GGG | - | chr4.3:20079824-20079843 | MS.gene70390:intron | 30.0% |
| ! | TTGGGAAAGTAATTTGGTTT+GGG | + | chr4.3:20080626-20080645 | None:intergenic | 30.0% |
| !! | AATTGCGTTTAGAAAGCATT+GGG | - | chr4.3:20080055-20080074 | MS.gene70390:intron | 30.0% |
| !! | AGTTAGTTGTTTGTTGTGTT+AGG | - | chr4.3:20082094-20082113 | MS.gene70390:intron | 30.0% |
| !! | GTTGGTTTCTTTTCGTTTTT+TGG | - | chr4.3:20081298-20081317 | MS.gene70390:intron | 30.0% |
| !! | TATTGTGATGGATGATATTC+AGG | - | chr4.3:20079056-20079075 | MS.gene70390:intron | 30.0% |
| !! | TTAGATCTTTTGAGTCCATT+GGG | + | chr4.3:20080913-20080932 | None:intergenic | 30.0% |
| !! | TTTAGATCTTTTGAGTCCAT+TGG | + | chr4.3:20080914-20080933 | None:intergenic | 30.0% |
| !!! | CAAATTGTGTTTTAGTCCTT+TGG | + | chr4.3:20079773-20079792 | None:intergenic | 30.0% |
| !!! | GAAACAACAACCTTGTTTTT+GGG | + | chr4.3:20080644-20080663 | None:intergenic | 30.0% |
| !!! | GAAGTTGATGCATACATTTT+TGG | - | chr4.3:20082946-20082965 | MS.gene70390:CDS | 30.0% |
| !!! | TGAAACAACAACCTTGTTTT+TGG | + | chr4.3:20080645-20080664 | None:intergenic | 30.0% |
| AAAGTGGCATAGAATGATAG+GGG | - | chr4.3:20081954-20081973 | MS.gene70390:intron | 35.0% | |
| AAGCACCTGTAAAACTGTTT+GGG | - | chr4.3:20081598-20081617 | MS.gene70390:intron | 35.0% | |
| AATAATAGCTTCAGTTCTCG+CGG | - | chr4.3:20078931-20078950 | MS.gene70390:CDS | 35.0% | |
| ATAGGATGAAACAACAACCT+AGG | + | chr4.3:20080675-20080694 | None:intergenic | 35.0% | |
| ATATCGTAATGCGTGTTCTA+AGG | + | chr4.3:20080217-20080236 | None:intergenic | 35.0% | |
| ATTGCTCCATGAAATTAACC+GGG | + | chr4.3:20080727-20080746 | None:intergenic | 35.0% | |
| CAACTGTATACCTTCCTAAT+AGG | + | chr4.3:20081990-20082009 | None:intergenic | 35.0% | |
| CACAAATACAACCCAAGAAA+AGG | + | chr4.3:20079838-20079857 | None:intergenic | 35.0% | |
| GACATTCCTTATGCACTAAA+AGG | + | chr4.3:20081326-20081345 | None:intergenic | 35.0% | |
| GTCATAAGGTTAGTAGTAGA+AGG | - | chr4.3:20082133-20082152 | MS.gene70390:intron | 35.0% | |
| GTTAACCAGACTATGATACT+AGG | - | chr4.3:20081412-20081431 | MS.gene70390:intron | 35.0% | |
| TAAGCACCTGTAAAACTGTT+TGG | - | chr4.3:20081597-20081616 | MS.gene70390:intron | 35.0% | |
| TACATTTGGATGCTAGAGTT+TGG | - | chr4.3:20081908-20081927 | MS.gene70390:intron | 35.0% | |
| TACCTCAGATTTACTCTTCA+TGG | + | chr4.3:20082443-20082462 | None:intergenic | 35.0% | |
| TACTTACTGGAGCCATAAAT+CGG | + | chr4.3:20078865-20078884 | None:intergenic | 35.0% | |
| TATCGCACTTTATAGGTGTT+TGG | + | chr4.3:20080142-20080161 | None:intergenic | 35.0% | |
| TCACTGGATTTAGCAGAAAT+CGG | + | chr4.3:20078829-20078848 | None:intergenic | 35.0% | |
| TCGTTCATAGCATTCATTCT+AGG | + | chr4.3:20080698-20080717 | None:intergenic | 35.0% | |
| TCTTCTTCTTCTTCTTCTTC+CGG | - | chr4.3:20079117-20079136 | MS.gene70390:intron | 35.0% | |
| TGAAAACTGTCTCCTTGAAT+TGG | + | chr4.3:20081171-20081190 | None:intergenic | 35.0% | |
| TGAAGAAGGTTTCCAAGTTA+AGG | - | chr4.3:20078635-20078654 | MS.gene70390:CDS | 35.0% | |
| TGTAAGAGTAAAGTTCTCTC+CGG | + | chr4.3:20080241-20080260 | None:intergenic | 35.0% | |
| TTAATATATGGGTACCCCAA+TGG | - | chr4.3:20080895-20080914 | MS.gene70390:intron | 35.0% | |
| TTATTTCCATTTGCGCTCAA+TGG | - | chr4.3:20081688-20081707 | MS.gene70390:intron | 35.0% | |
| TTGAATTCTGCAATCTCTGT+TGG | - | chr4.3:20081280-20081299 | MS.gene70390:intron | 35.0% | |
| TTGCATCAAAAGCCAAAAAC+AGG | + | chr4.3:20079304-20079323 | None:intergenic | 35.0% | |
| TTTATTGTGTAGGCACAGAT+GGG | - | chr4.3:20082568-20082587 | MS.gene70390:CDS | 35.0% | |
| ! | AGATAATTTTTGTGGAGTCC+AGG | - | chr4.3:20082164-20082183 | MS.gene70390:intron | 35.0% |
| ! | AGTAGTTCATTTTGTCCTGA+TGG | - | chr4.3:20079915-20079934 | MS.gene70390:intron | 35.0% |
| ! | CTATAGTTCTATACGCAGTT+GGG | - | chr4.3:20081254-20081273 | MS.gene70390:intron | 35.0% |
| ! | CTATTAGGAAGGTATACAGT+TGG | - | chr4.3:20081988-20082007 | MS.gene70390:intron | 35.0% |
| ! | GTAGTTCATTTTGTCCTGAT+GGG | - | chr4.3:20079916-20079935 | MS.gene70390:intron | 35.0% |
| ! | TCTATAGTTCTATACGCAGT+TGG | - | chr4.3:20081253-20081272 | MS.gene70390:intron | 35.0% |
| ! | TTGGTTCCTTTTAGTGCATA+AGG | - | chr4.3:20081317-20081336 | MS.gene70390:intron | 35.0% |
| ! | TTTTGCTAACCTGTACTTAC+TGG | + | chr4.3:20078878-20078897 | None:intergenic | 35.0% |
| !! | ACTGCTTGTTGATTTCTGAA+TGG | - | chr4.3:20081876-20081895 | MS.gene70390:intron | 35.0% |
| !! | AGGTTATTCTGATTTTGGGA+TGG | - | chr4.3:20080576-20080595 | MS.gene70390:intron | 35.0% |
| !! | CATAGCATTCATTCTAGGAT+AGG | + | chr4.3:20080693-20080712 | None:intergenic | 35.0% |
| !! | CTGCTTGTTGATTTCTGAAT+GGG | - | chr4.3:20081877-20081896 | MS.gene70390:intron | 35.0% |
| !! | GAAGAGTGTGTTGTTTAAGA+AGG | - | chr4.3:20079185-20079204 | MS.gene70390:CDS | 35.0% |
| !! | TAGATCTTTTGAGTCCATTG+GGG | + | chr4.3:20080912-20080931 | None:intergenic | 35.0% |
| !! | TGCTTGTTGATTTCTGAATG+GGG | - | chr4.3:20081878-20081897 | MS.gene70390:intron | 35.0% |
| !!! | ACAGGAGCACTTTTACTTTA+AGG | + | chr4.3:20079601-20079620 | None:intergenic | 35.0% |
| !!! | CAGGAGCACTTTTACTTTAA+GGG | + | chr4.3:20079600-20079619 | None:intergenic | 35.0% |
| !!! | GGTTATTCTGATTTTGGGAT+GGG | - | chr4.3:20080577-20080596 | MS.gene70390:intron | 35.0% |
| AAACTACCATTGAGCGCAAA+TGG | + | chr4.3:20081697-20081716 | None:intergenic | 40.0% | |
| AAACTGTCTCCTTGAATTGG+TGG | + | chr4.3:20081168-20081187 | None:intergenic | 40.0% | |
| AAGAAGACTACCAGTGTTTG+CGG | - | chr4.3:20082993-20083012 | MS.gene70390:CDS | 40.0% | |
| AAGTATTTAGCAAGCTGCGA+CGG | + | chr4.3:20078793-20078812 | None:intergenic | 40.0% | |
| AATGGGGAATGTGGTACATT+TGG | - | chr4.3:20081894-20081913 | MS.gene70390:intron | 40.0% | |
| ACTAGGATCTCCTATTAGGA+AGG | - | chr4.3:20081977-20081996 | MS.gene70390:intron | 40.0% | |
| AGGCTGTAGTTGTTTAAAGG+AGG | - | chr4.3:20079741-20079760 | MS.gene70390:intron | 40.0% | |
| AGGTGCGATGATTTACTTCA+CGG | + | chr4.3:20080363-20080382 | None:intergenic | 40.0% | |
| ATCACTGAGATGCCAATATC+AGG | + | chr4.3:20080767-20080786 | None:intergenic | 40.0% | |
| ATTGCTTAACATGTGCCCTT+AGG | + | chr4.3:20079438-20079457 | None:intergenic | 40.0% | |
| CAACTACAGCCTAATGGAAA+TGG | + | chr4.3:20079733-20079752 | None:intergenic | 40.0% | |
| CAATTCTACAGAGAGAGAGT+CGG | + | chr4.3:20081528-20081547 | None:intergenic | 40.0% | |
| CTAAAACAATCGCGCATTAG+AGG | + | chr4.3:20079954-20079973 | None:intergenic | 40.0% | |
| CTCCATGAAGAGTAAATCTG+AGG | - | chr4.3:20082438-20082457 | MS.gene70390:CDS | 40.0% | |
| CTTAAACAACACACTCTTCG+AGG | + | chr4.3:20079184-20079203 | None:intergenic | 40.0% | |
| CTTGTTTAATTGGGCCAGAT+AGG | - | chr4.3:20080522-20080541 | MS.gene70390:intron | 40.0% | |
| CTTTATTGTGTAGGCACAGA+TGG | - | chr4.3:20082567-20082586 | MS.gene70390:CDS | 40.0% | |
| GAACAACAGCAAGATGAAGA+AGG | - | chr4.3:20078621-20078640 | MS.gene70390:CDS | 40.0% | |
| GAACACGCATTACGATATAC+CGG | - | chr4.3:20080219-20080238 | MS.gene70390:intron | 40.0% | |
| GAACTCTGTCTGAACCATTT+GGG | + | chr4.3:20082915-20082934 | None:intergenic | 40.0% | |
| GAAGTAAATCATCGCACCTA+CGG | - | chr4.3:20080364-20080383 | MS.gene70390:intron | 40.0% | |
| GACTATAAATTGGACCATCC+TGG | - | chr4.3:20080317-20080336 | MS.gene70390:intron | 40.0% | |
| GGACCTAAATGTTGAATTGC+TGG | - | chr4.3:20081851-20081870 | MS.gene70390:intron | 40.0% | |
| GGCATAAATAATGTCCCATC+AGG | + | chr4.3:20079933-20079952 | None:intergenic | 40.0% | |
| TAGGTGTTTGGACACAGATA+AGG | + | chr4.3:20080130-20080149 | None:intergenic | 40.0% | |
| TCATCCAACTCGATCATCAA+TGG | + | chr4.3:20078682-20078701 | None:intergenic | 40.0% | |
| TGATTTCTGAATGGGGAATG+TGG | - | chr4.3:20081885-20081904 | MS.gene70390:intron | 40.0% | |
| TGGTGAGGAAGTTATTGTGA+TGG | - | chr4.3:20079044-20079063 | MS.gene70390:intron | 40.0% | |
| TTAAAGGAGGATTGTCCCAA+AGG | - | chr4.3:20079754-20079773 | MS.gene70390:intron | 40.0% | |
| TTGCTTAACATGTGCCCTTA+GGG | + | chr4.3:20079437-20079456 | None:intergenic | 40.0% | |
| TTTATGGCTCCAGTAAGTAC+AGG | - | chr4.3:20078866-20078885 | MS.gene70390:CDS | 40.0% | |
| ! | AAGGAGACAGTTTTCACACA+AGG | - | chr4.3:20081175-20081194 | MS.gene70390:intron | 40.0% |
| ! | AGCTGATTCAGTTACTTCAG+CGG | + | chr4.3:20082770-20082789 | None:intergenic | 40.0% |
| ! | ATCCTTTTACAGTTTGCCCA+CGG | - | chr4.3:20082388-20082407 | MS.gene70390:CDS | 40.0% |
| ! | CACTGGTAGTCTTCTTTTAG+TGG | + | chr4.3:20082989-20083008 | None:intergenic | 40.0% |
| ! | CATTTGTTTGGAATTACGGC+GGG | - | chr4.3:20079980-20079999 | MS.gene70390:intron | 40.0% |
| ! | CTATAGCTTTTGCCAAATCC+CGG | - | chr4.3:20079648-20079667 | MS.gene70390:intron | 40.0% |
| ! | CTGGTAGTGATTCCATGTAT+AGG | - | chr4.3:20080556-20080575 | MS.gene70390:intron | 40.0% |
| ! | CTTGCAAGTCTTGTGACTAA+AGG | + | chr4.3:20082679-20082698 | None:intergenic | 40.0% |
| ! | GACAGTTTTCACACAAGGTT+TGG | - | chr4.3:20081180-20081199 | MS.gene70390:intron | 40.0% |
| ! | GCATTTGTTTGGAATTACGG+CGG | - | chr4.3:20079979-20079998 | MS.gene70390:intron | 40.0% |
| ! | GGTAGTCTTCTTTTAGTGGT+CGG | + | chr4.3:20082985-20083004 | None:intergenic | 40.0% |
| ! | TAGGAAGGTATACAGTTGGA+GGG | - | chr4.3:20081992-20082011 | MS.gene70390:intron | 40.0% |
| ! | TGAGTCTTTGTTGTCATTGC+TGG | - | chr4.3:20081379-20081398 | MS.gene70390:intron | 40.0% |
| ! | TGATGGATGATATTCAGGTG+AGG | - | chr4.3:20079061-20079080 | MS.gene70390:intron | 40.0% |
| ! | TTAGGAAGGTATACAGTTGG+AGG | - | chr4.3:20081991-20082010 | MS.gene70390:intron | 40.0% |
| ! | TTTCTAGTCAATCGCGCATT+AGG | + | chr4.3:20080013-20080032 | None:intergenic | 40.0% |
| !! | AATGCGTGTTCTAAGGTGTT+TGG | + | chr4.3:20080210-20080229 | None:intergenic | 40.0% |
| !! | AATGTTAACTTGTGCCCTCA+AGG | + | chr4.3:20079576-20079595 | None:intergenic | 40.0% |
| !! | ACTCATTAACTTGTGCCTTG+AGG | - | chr4.3:20079558-20079577 | MS.gene70390:intron | 40.0% |
| !! | ATCGAGTTGGATGATAACAG+AGG | - | chr4.3:20078688-20078707 | MS.gene70390:CDS | 40.0% |
| !! | CTCATTAACTTGTGCCTTGA+GGG | - | chr4.3:20079559-20079578 | MS.gene70390:intron | 40.0% |
| !! | CTTGCAAGTTTTGTGACTAC+AGG | + | chr4.3:20082796-20082815 | None:intergenic | 40.0% |
| !! | CTTGTTAACTTGTGCCCTAA+GGG | - | chr4.3:20079420-20079439 | MS.gene70390:intron | 40.0% |
| !! | GAGTGTGTTGTTTAAGAAGG+AGG | - | chr4.3:20079188-20079207 | MS.gene70390:CDS | 40.0% |
| !! | GGATGCTTTACTGACTTGTT+TGG | + | chr4.3:20080109-20080128 | None:intergenic | 40.0% |
| !! | TCTTGTTAACTTGTGCCCTA+AGG | - | chr4.3:20079419-20079438 | MS.gene70390:intron | 40.0% |
| AAGATCTCCGGTTCAAATCC+AGG | + | chr4.3:20080338-20080357 | None:intergenic | 45.0% | |
| ACTGAGATGCCAATATCAGG+CGG | + | chr4.3:20080764-20080783 | None:intergenic | 45.0% | |
| AGGTATACAGTTGGAGGGAT+AGG | - | chr4.3:20081997-20082016 | MS.gene70390:intron | 45.0% | |
| ATACAGTTGGAGGGATAGGA+GGG | - | chr4.3:20082001-20082020 | MS.gene70390:intron | 45.0% | |
| ATGAAGCTCTTCTCTTCCGT+GGG | + | chr4.3:20082407-20082426 | None:intergenic | 45.0% | |
| ATGTATCAAACGCCGGTGAA+GGG | - | chr4.3:20079021-20079040 | MS.gene70390:CDS | 45.0% | |
| ATGTCCATAAGCGTGTAACG+TGG | - | chr4.3:20080266-20080285 | MS.gene70390:intron | 45.0% | |
| CAAACTATCTGGCCACACTT+TGG | + | chr4.3:20081441-20081460 | None:intergenic | 45.0% | |
| CAATCAACAACGATGAGTCC+AGG | - | chr4.3:20078724-20078743 | MS.gene70390:CDS | 45.0% | |
| CACCTACGGTCTATCCAATT+GGG | - | chr4.3:20080378-20080397 | MS.gene70390:intron | 45.0% | |
| CAGATAGGAAATTTGCCTGC+TGG | - | chr4.3:20080537-20080556 | MS.gene70390:intron | 45.0% | |
| CAGCAGGCAAATTTCCTATC+TGG | + | chr4.3:20080539-20080558 | None:intergenic | 45.0% | |
| CCAGACACATACACCCTTAT+TGG | + | chr4.3:20079880-20079899 | None:intergenic | 45.0% | |
| CGGAGAATTGAATGAGTCAC+TGG | + | chr4.3:20078845-20078864 | None:intergenic | 45.0% | |
| CGTTGCGACAAAATTTCTCG+CGG | + | chr4.3:20080081-20080100 | None:intergenic | 45.0% | |
| CTCGTTCGAAGTCCTTAACT+TGG | + | chr4.3:20078650-20078669 | None:intergenic | 45.0% | |
| CTGCAACCCGGTTAATTTCA+TGG | - | chr4.3:20080718-20080737 | MS.gene70390:intron | 45.0% | |
| CTGGACTCATCGTTGTTGAT+TGG | + | chr4.3:20078726-20078745 | None:intergenic | 45.0% | |
| CTGTTCTTTCCTCCTGACAT+TGG | + | chr4.3:20079087-20079106 | None:intergenic | 45.0% | |
| GATACTAGGGATCCAAAGTG+TGG | - | chr4.3:20081426-20081445 | MS.gene70390:intron | 45.0% | |
| GCATAGAATGATAGGGGACT+AGG | - | chr4.3:20081960-20081979 | MS.gene70390:intron | 45.0% | |
| GCTGAAGTAACTGAATCAGC+TGG | - | chr4.3:20082769-20082788 | MS.gene70390:CDS | 45.0% | |
| GCTGCAATGTTCTGTCATTC+TGG | - | chr4.3:20081500-20081519 | MS.gene70390:intron | 45.0% | |
| GGAACTCTGTCTGAACCATT+TGG | + | chr4.3:20082916-20082935 | None:intergenic | 45.0% | |
| GGATCCCTAGTATCATAGTC+TGG | + | chr4.3:20081420-20081439 | None:intergenic | 45.0% | |
| GGTTTCCTTCCACCAATTCA+AGG | - | chr4.3:20081156-20081175 | MS.gene70390:intron | 45.0% | |
| GTAACAGAATGTCAGAGACC+TGG | + | chr4.3:20082185-20082204 | None:intergenic | 45.0% | |
| GTTACACGCTTATGGACATC+TGG | + | chr4.3:20080265-20080284 | None:intergenic | 45.0% | |
| TACATGGAATCACTACCAGC+AGG | + | chr4.3:20080555-20080574 | None:intergenic | 45.0% | |
| TACTTCACGGACAAGATCTC+CGG | + | chr4.3:20080350-20080369 | None:intergenic | 45.0% | |
| TATACAGTTGGAGGGATAGG+AGG | - | chr4.3:20082000-20082019 | MS.gene70390:intron | 45.0% | |
| TCAGTTACTTCAGCGGTTTC+AGG | + | chr4.3:20082763-20082782 | None:intergenic | 45.0% | |
| TCATCCACGTTACACGCTTA+TGG | + | chr4.3:20080273-20080292 | None:intergenic | 45.0% | |
| TCCAGATTCAGCTACTTCAG+CGG | + | chr4.3:20082656-20082675 | None:intergenic | 45.0% | |
| TCTTCTTCTTCTTCCGGTAG+AGG | - | chr4.3:20079135-20079154 | MS.gene70390:intron | 45.0% | |
| TGACGTCACGACTCCAATAA+GGG | - | chr4.3:20079864-20079883 | MS.gene70390:intron | 45.0% | |
| TGGTATGATCCGCCTGATAT+TGG | - | chr4.3:20080752-20080771 | MS.gene70390:intron | 45.0% | |
| TGTCATTGCTGGACACGTAT+TGG | - | chr4.3:20081390-20081409 | MS.gene70390:intron | 45.0% | |
| TGTCTCCTTGAATTGGTGGA+AGG | + | chr4.3:20081164-20081183 | None:intergenic | 45.0% | |
| TTCAGACAGAGTTCCCTCTA+GGG | - | chr4.3:20082921-20082940 | MS.gene70390:CDS | 45.0% | |
| TTCCGTGGGCAAACTGTAAA+AGG | + | chr4.3:20082393-20082412 | None:intergenic | 45.0% | |
| TTGGTGGAAGGAAACCTACA+AGG | + | chr4.3:20081152-20081171 | None:intergenic | 45.0% | |
| ! | AGATTCAGGCGAAGTTGGTT+GGG | + | chr4.3:20082821-20082840 | None:intergenic | 45.0% |
| ! | CCAATAAGGGTGTATGTGTC+TGG | - | chr4.3:20079877-20079896 | MS.gene70390:intron | 45.0% |
| ! | GCTCTCCCAAACAGTTTTAC+AGG | + | chr4.3:20081606-20081625 | None:intergenic | 45.0% |
| ! | TGATGGTGTTGGGATTGACA+GGG | + | chr4.3:20082852-20082871 | None:intergenic | 45.0% |
| ! | TTCGCCATTGATGATCGAGT+TGG | - | chr4.3:20078675-20078694 | MS.gene70390:CDS | 45.0% |
| !! | AAAAATAAGATATTAATATA+TGG | - | chr4.3:20080883-20080902 | MS.gene70390:intron | 5.0% |
| !! | AAAATAAGATATTAATATAT+GGG | - | chr4.3:20080884-20080903 | MS.gene70390:intron | 5.0% |
| ACTCTTCGAGGACGAAGAAG+AGG | + | chr4.3:20079172-20079191 | None:intergenic | 50.0% | |
| AGAAGGAGGTTTGCAGAGCA+TGG | - | chr4.3:20079202-20079221 | MS.gene70390:CDS | 50.0% | |
| AGCCTCAATGCCATCATCCA+GGG | + | chr4.3:20082887-20082906 | None:intergenic | 50.0% | |
| AGGACTGTGCTTGTATGACC+CGG | - | chr4.3:20082609-20082628 | MS.gene70390:CDS | 50.0% | |
| ATGAGTGCGATGAGGTTCAG+GGG | + | chr4.3:20082716-20082735 | None:intergenic | 50.0% | |
| ATTCAGGTGAGGCCAATGTC+AGG | - | chr4.3:20079072-20079091 | MS.gene70390:intron | 50.0% | |
| ATTGAGGCTGTCCTCCCAAA+TGG | - | chr4.3:20082898-20082917 | MS.gene70390:CDS | 50.0% | |
| CAGCGGTTTCAGGAACAATG+CGG | + | chr4.3:20082753-20082772 | None:intergenic | 50.0% | |
| CATGAGTGCGATGAGGTTCA+GGG | + | chr4.3:20082717-20082736 | None:intergenic | 50.0% | |
| CGATGAGATTCAGGCGAAGT+TGG | + | chr4.3:20082826-20082845 | None:intergenic | 50.0% | |
| CTCCCAATTGGATAGACCGT+AGG | + | chr4.3:20080383-20080402 | None:intergenic | 50.0% | |
| CTCTGTCTGAACCATTTGGG+AGG | + | chr4.3:20082912-20082931 | None:intergenic | 50.0% | |
| CTCTTCATGGAGAGACGACT+TGG | + | chr4.3:20082430-20082449 | None:intergenic | 50.0% | |
| GAAGGAGGTTTGCAGAGCAT+GGG | - | chr4.3:20079203-20079222 | MS.gene70390:CDS | 50.0% | |
| GATGAAGCTCTTCTCTTCCG+TGG | + | chr4.3:20082408-20082427 | None:intergenic | 50.0% | |
| GATGTATCAAACGCCGGTGA+AGG | - | chr4.3:20079020-20079039 | MS.gene70390:CDS | 50.0% | |
| GCACCTACGGTCTATCCAAT+TGG | - | chr4.3:20080377-20080396 | MS.gene70390:intron | 50.0% | |
| GCATCAACTTCCTCCCTAGA+GGG | + | chr4.3:20082937-20082956 | None:intergenic | 50.0% | |
| GGAAGATGAAGAGCCTCTAC+CGG | + | chr4.3:20079151-20079170 | None:intergenic | 50.0% | |
| GGACCATCCTGGATTTGAAC+CGG | - | chr4.3:20080328-20080347 | MS.gene70390:intron | 50.0% | |
| GGGGACTAGGATCTCCTATT+AGG | - | chr4.3:20081973-20081992 | MS.gene70390:intron | 50.0% | |
| GGTCTATCCAATTGGGAGTG+AGG | - | chr4.3:20080385-20080404 | MS.gene70390:intron | 50.0% | |
| GTGACGTCACGACTCCAATA+AGG | - | chr4.3:20079863-20079882 | MS.gene70390:intron | 50.0% | |
| GTTCAGACAGAGTTCCCTCT+AGG | - | chr4.3:20082920-20082939 | MS.gene70390:CDS | 50.0% | |
| TCAGGAACAATGCGGCTATC+CGG | + | chr4.3:20082631-20082650 | None:intergenic | 50.0% | |
| TCCGCTGAAGTAGCTGAATC+TGG | - | chr4.3:20082652-20082671 | MS.gene70390:CDS | 50.0% | |
| TCTCCGGTTCAAATCCAGGA+TGG | + | chr4.3:20080334-20080353 | None:intergenic | 50.0% | |
| TGCATCAACTTCCTCCCTAG+AGG | + | chr4.3:20082938-20082957 | None:intergenic | 50.0% | |
| TGCTATGAACGACTGCAACC+CGG | - | chr4.3:20080706-20080725 | MS.gene70390:intron | 50.0% | |
| TTGCAAGCAAGCGTCCTTGT+AGG | - | chr4.3:20081135-20081154 | MS.gene70390:intron | 50.0% | |
| ! | ACAGGGGTACGATGAGATTC+AGG | + | chr4.3:20082835-20082854 | None:intergenic | 50.0% |
| ! | AGTTATGGCGGGAACAAACC+TGG | + | chr4.3:20079263-20079282 | None:intergenic | 50.0% |
| ! | CAGCGGATTCAGGAACAATG+CGG | + | chr4.3:20082639-20082658 | None:intergenic | 50.0% |
| ! | CCTGGCATTTGGAGTCATAG+CGG | + | chr4.3:20079245-20079264 | None:intergenic | 50.0% |
| ! | CTGATGGTGTTGGGATTGAC+AGG | + | chr4.3:20082853-20082872 | None:intergenic | 50.0% |
| ! | GAGATTCAGGCGAAGTTGGT+TGG | + | chr4.3:20082822-20082841 | None:intergenic | 50.0% |
| ! | GATGGTGTTGGGATTGACAG+GGG | + | chr4.3:20082851-20082870 | None:intergenic | 50.0% |
| ! | TAAGGGTGTATGTGTCTGGC+AGG | - | chr4.3:20079881-20079900 | MS.gene70390:intron | 50.0% |
| ! | TCAGCTACTTCAGCGGATTC+AGG | + | chr4.3:20082649-20082668 | None:intergenic | 50.0% |
| ACCGGCGTTTGATACATCCG+CGG | + | chr4.3:20079018-20079037 | None:intergenic | 55.0% | |
| ACTTCCTCACCACCCTTCAC+CGG | + | chr4.3:20079036-20079055 | None:intergenic | 55.0% | |
| AGGTTCAGGGGAAGCTGGTT+GGG | + | chr4.3:20082704-20082723 | None:intergenic | 55.0% | |
| AGTGTTTGCGGCACTTTGCG+AGG | - | chr4.3:20083005-20083024 | MS.gene70390:CDS | 55.0% | |
| ATACCTGACTGCCGCAAGAG+CGG | + | chr4.3:20080485-20080504 | None:intergenic | 55.0% | |
| ATCCCAACACCATCAGCGAC+TGG | - | chr4.3:20082857-20082876 | MS.gene70390:CDS | 55.0% | |
| ATTCCCCCCTGAACTGTTGC+CGG | + | chr4.3:20078914-20078933 | None:intergenic | 55.0% | |
| CAGCCTCAATGCCATCATCC+AGG | + | chr4.3:20082888-20082907 | None:intergenic | 55.0% | |
| CAGGAACAATGCGGCTATCC+GGG | + | chr4.3:20082630-20082649 | None:intergenic | 55.0% | |
| CCGCTATGACTCCAAATGCC+AGG | - | chr4.3:20079242-20079261 | MS.gene70390:intron | 55.0% | |
| CCTGAACTGTTGCCGGAGTA+CGG | + | chr4.3:20078907-20078926 | None:intergenic | 55.0% | |
| CGTACTCCGGCAACAGTTCA+GGG | - | chr4.3:20078905-20078924 | MS.gene70390:CDS | 55.0% | |
| CTGAAATCACGGTGAGACGC+CGG | + | chr4.3:20079670-20079689 | None:intergenic | 55.0% | |
| GCAAAAACGCCACCGTACTC+CGG | - | chr4.3:20078892-20078911 | MS.gene70390:CDS | 55.0% | |
| GCATGAGTGCGATGAGGTTC+AGG | + | chr4.3:20082718-20082737 | None:intergenic | 55.0% | |
| GCCGAGAACTTCGACGTTAC+CGG | - | chr4.3:20078763-20078782 | MS.gene70390:CDS | 55.0% | |
| GCCGGTAACGTCGAAGTTCT+CGG | + | chr4.3:20078767-20078786 | None:intergenic | 55.0% | |
| GCCTCAATGCCATCATCCAG+GGG | + | chr4.3:20082886-20082905 | None:intergenic | 55.0% | |
| GCGGGAACAAACCTGGCATT+TGG | + | chr4.3:20079256-20079275 | None:intergenic | 55.0% | |
| GGTAACGTCGAAGTTCTCGG+CGG | + | chr4.3:20078764-20078783 | None:intergenic | 55.0% | |
| GTACTCCGGCAACAGTTCAG+GGG | - | chr4.3:20078906-20078925 | MS.gene70390:CDS | 55.0% | |
| GTGTTTGCGGCACTTTGCGA+GGG | - | chr4.3:20083006-20083025 | MS.gene70390:CDS | 55.0% | |
| TACTCCGGCAACAGTTCAGG+GGG | - | chr4.3:20078907-20078926 | MS.gene70390:CDS | 55.0% | |
| TATCAAACGCCGGTGAAGGG+TGG | - | chr4.3:20079024-20079043 | MS.gene70390:CDS | 55.0% | |
| TGAAATCACGGTGAGACGCC+GGG | + | chr4.3:20079669-20079688 | None:intergenic | 55.0% | |
| TGCAGAGCATGGGAGGAATC+TGG | - | chr4.3:20079213-20079232 | MS.gene70390:CDS | 55.0% | |
| TGTTTGCGGCACTTTGCGAG+GGG | - | chr4.3:20083007-20083026 | MS.gene70390:CDS | 55.0% | |
| TTGCTCGCCTCACTCCCAAT+TGG | + | chr4.3:20080395-20080414 | None:intergenic | 55.0% | |
| ! | ACCCCTGGATGATGGCATTG+AGG | - | chr4.3:20082882-20082901 | MS.gene70390:CDS | 55.0% |
| ! | AGACAGAGTTCCCTCTAGGG+AGG | - | chr4.3:20082924-20082943 | MS.gene70390:CDS | 55.0% |
| ! | GACCAGTCGCTGATGGTGTT+GGG | + | chr4.3:20082862-20082881 | None:intergenic | 55.0% |
| ! | TGACCAGTCGCTGATGGTGT+TGG | + | chr4.3:20082863-20082882 | None:intergenic | 55.0% |
| !! | TCGCAAAGTGCCGCAAACAC+TGG | + | chr4.3:20083006-20083025 | None:intergenic | 55.0% |
| AACAATGCGGCTATCCGGGC+TGG | + | chr4.3:20082740-20082759 | None:intergenic | 60.0% | |
| ACTCCGGCAACAGTTCAGGG+GGG | - | chr4.3:20078908-20078927 | MS.gene70390:CDS | 60.0% | |
| AGGTTCCCTCACCGCTCTTG+CGG | - | chr4.3:20080471-20080490 | MS.gene70390:intron | 60.0% | |
| CAGGTGAGGCCAATGTCAGG+AGG | - | chr4.3:20079075-20079094 | MS.gene70390:intron | 60.0% | |
| CCGTACTCCGGCAACAGTTC+AGG | - | chr4.3:20078904-20078923 | MS.gene70390:CDS | 60.0% | |
| CGATGAGGTTCAGGGGAAGC+TGG | + | chr4.3:20082709-20082728 | None:intergenic | 60.0% | |
| GAACTGTTGCCGGAGTACGG+TGG | + | chr4.3:20078904-20078923 | None:intergenic | 60.0% | |
| GAGGTTCAGGGGAAGCTGGT+TGG | + | chr4.3:20082705-20082724 | None:intergenic | 60.0% | |
| GCCGCGGATGTATCAAACGC+CGG | - | chr4.3:20079014-20079033 | MS.gene70390:CDS | 60.0% | |
| GCGGCGTAGGGTTGAAAACC+TGG | + | chr4.3:20078745-20078764 | None:intergenic | 60.0% | |
| GGAGGTTTGCAGAGCATGGG+AGG | - | chr4.3:20079206-20079225 | MS.gene70390:CDS | 60.0% | |
| TCATCGCACTCATGCCAGCC+CGG | - | chr4.3:20082723-20082742 | MS.gene70390:CDS | 60.0% | |
| TCGAAGTTCTCGGCGGCGTA+GGG | + | chr4.3:20078757-20078776 | None:intergenic | 60.0% | |
| ! | GACTGGTCACCCCTGGATGA+TGG | - | chr4.3:20082874-20082893 | MS.gene70390:CDS | 60.0% |
| AACGCCGGTGAAGGGTGGTG+AGG | - | chr4.3:20079029-20079048 | MS.gene70390:CDS | 65.0% | |
| AGAAGCAGCTCTCGTCGCCG+CGG | - | chr4.3:20078998-20079017 | MS.gene70390:CDS | 65.0% | |
| CACGGTGAGACGCCGGGATT+TGG | + | chr4.3:20079663-20079682 | None:intergenic | 65.0% | |
| CAGGGGTGACCAGTCGCTGA+TGG | + | chr4.3:20082869-20082888 | None:intergenic | 65.0% | |
| GACTGCCGCAAGAGCGGTGA+GGG | + | chr4.3:20080479-20080498 | None:intergenic | 65.0% | |
| GTCGAAGTTCTCGGCGGCGT+AGG | + | chr4.3:20078758-20078777 | None:intergenic | 65.0% | |
| TCACCGCTCTTGCGGCAGTC+AGG | - | chr4.3:20080479-20080498 | MS.gene70390:intron | 65.0% | |
| TGACTGCCGCAAGAGCGGTG+AGG | + | chr4.3:20080480-20080499 | None:intergenic | 65.0% | |
| ! | CATCAGCGACTGGTCACCCC+TGG | - | chr4.3:20082867-20082886 | MS.gene70390:CDS | 65.0% |
| ! | GGGCTGGCATGAGTGCGATG+AGG | + | chr4.3:20082724-20082743 | None:intergenic | 65.0% |
| AGCAAGCTGCGACGGCGAGC+CGG | + | chr4.3:20078785-20078804 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 20078601 | 20083035 | 20078601 | ID=MS.gene70390 |
| chr4.3 | mRNA | 20078601 | 20083035 | 20078601 | ID=MS.gene70390.t1;Parent=MS.gene70390 |
| chr4.3 | exon | 20082373 | 20083035 | 20082373 | ID=MS.gene70390.t1.exon1;Parent=MS.gene70390.t1 |
| chr4.3 | CDS | 20082373 | 20083035 | 20082373 | ID=cds.MS.gene70390.t1;Parent=MS.gene70390.t1 |
| chr4.3 | exon | 20079177 | 20079236 | 20079177 | ID=MS.gene70390.t1.exon2;Parent=MS.gene70390.t1 |
| chr4.3 | CDS | 20079177 | 20079236 | 20079177 | ID=cds.MS.gene70390.t1;Parent=MS.gene70390.t1 |
| chr4.3 | exon | 20078601 | 20079056 | 20078601 | ID=MS.gene70390.t1.exon3;Parent=MS.gene70390.t1 |
| chr4.3 | CDS | 20078601 | 20079056 | 20078601 | ID=cds.MS.gene70390.t1;Parent=MS.gene70390.t1 |
| Gene Sequence |
| Protein sequence |
