AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene70404

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70404.t1 MTR_7g446060 72.527 91 25 0 122 212 2 92 1.76e-40 145
MS.gene70404.t1 MTR_6g051425 32.967 273 174 4 47 310 19 291 2.14e-37 144
MS.gene70404.t1 MTR_2g090105 43.434 198 78 6 623 814 16 185 4.43e-35 132
MS.gene70404.t1 MTR_7g031620 79.268 82 17 0 50 131 1 82 1.31e-34 127
MS.gene70404.t1 MTR_5g023310 40.764 157 26 2 176 332 16 105 4.83e-28 109
MS.gene70404.t1 MTR_0558s0020 29.070 258 155 7 50 281 41 296 1.70e-24 105
MS.gene70404.t1 MTR_4g035820 30.375 293 182 10 7 285 40 324 5.59e-24 108
MS.gene70404.t1 MTR_0856s0010 37.008 127 79 1 45 170 34 160 1.22e-19 87.0
MS.gene70404.t1 MTR_8g446020 29.282 181 122 3 105 281 78 256 2.45e-19 89.0
MS.gene70404.t1 MTR_1g008290 37.209 129 78 2 109 237 19 144 4.94e-17 79.3
MS.gene70404.t1 MTR_6g090505 28.889 180 122 3 105 280 53 230 5.95e-16 80.9
MS.gene70404.t1 MTR_1g083640 26.638 229 140 7 50 252 56 282 8.97e-16 79.0
MS.gene70404.t1 MTR_1g070355 28.322 286 175 11 7 275 37 309 1.83e-15 80.9
MS.gene70404.t1 MTR_6g022070 27.397 146 102 1 335 480 1 142 1.96e-13 72.8
MS.gene70404.t1 MTR_7g446480 32.530 166 107 4 127 289 151 314 3.50e-13 72.0
MS.gene70404.t1 MTR_1g013060 29.108 213 136 6 41 241 20 229 4.24e-13 70.1
MS.gene70404.t1 MTR_8g465780 32.456 114 71 2 411 523 1 109 5.86e-13 68.6
MS.gene70404.t1 MTR_7g446510 31.928 166 108 4 127 289 166 329 1.14e-12 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70404.t1 AT4G15090 31.301 738 467 11 45 775 51 755 5.84e-124 393
MS.gene70404.t1 AT4G15090 31.301 738 467 11 45 775 51 755 5.84e-124 393
MS.gene70404.t1 AT4G15090 31.301 738 467 11 45 775 51 755 5.84e-124 393
MS.gene70404.t1 AT4G15090 31.301 738 467 11 45 775 51 755 5.84e-124 393
MS.gene70404.t1 AT4G15090 31.301 738 467 11 45 775 51 755 5.84e-124 393
MS.gene70404.t1 AT1G76320 31.537 761 462 17 51 788 3 727 1.59e-115 368
MS.gene70404.t1 AT1G76320 31.537 761 462 17 51 788 3 727 1.59e-115 368
MS.gene70404.t1 AT1G76320 32.016 759 459 18 51 788 3 725 1.66e-115 368
MS.gene70404.t1 AT1G76320 36.602 571 326 11 51 609 3 549 1.88e-115 365
MS.gene70404.t1 AT4G38180 34.856 591 356 11 32 604 55 634 4.76e-112 360
MS.gene70404.t1 AT1G52520 34.032 620 370 15 12 607 37 641 7.38e-110 352
MS.gene70404.t1 AT3G22170 34.079 581 336 9 45 607 70 621 1.40e-109 355
MS.gene70404.t1 AT3G22170 34.079 581 336 9 45 607 70 621 1.40e-109 355
MS.gene70404.t1 AT1G80010 32.929 577 362 13 45 605 95 662 3.83e-99 324
MS.gene70404.t1 AT4G19990 34.188 585 318 13 48 609 24 564 6.52e-96 316
MS.gene70404.t1 AT4G19990 34.188 585 318 13 48 609 24 564 6.52e-96 316
MS.gene70404.t1 AT4G19990 34.188 585 318 13 48 609 24 564 7.53e-96 316
MS.gene70404.t1 AT4G19990 34.188 585 318 13 48 609 24 564 8.30e-96 317
MS.gene70404.t1 AT4G19990 34.188 585 318 13 48 609 24 564 8.30e-96 317
MS.gene70404.t1 AT4G19990 34.188 585 318 13 48 609 38 578 8.56e-96 316
MS.gene70404.t1 AT4G19990 35.248 505 277 9 111 609 47 507 2.04e-90 300
MS.gene70404.t1 AT2G27110 31.433 614 351 18 20 604 7 579 2.20e-86 293
MS.gene70404.t1 AT2G27110 31.433 614 351 18 20 604 7 579 2.20e-86 293
MS.gene70404.t1 AT2G32250 34.624 439 272 6 221 656 176 602 1.01e-83 284
MS.gene70404.t1 AT2G32250 34.624 439 272 6 221 656 135 561 1.25e-83 283
MS.gene70404.t1 AT2G32250 34.624 439 272 6 221 656 135 561 1.48e-83 283
MS.gene70404.t1 AT2G32250 34.624 439 272 6 221 656 176 602 2.34e-83 284
MS.gene70404.t1 AT2G32250 34.624 439 272 6 221 656 176 602 2.34e-83 284
MS.gene70404.t1 AT2G32250 34.624 439 272 6 221 656 176 602 2.63e-83 283
MS.gene70404.t1 AT2G32250 34.624 439 272 6 221 656 176 602 2.63e-83 283
MS.gene70404.t1 AT2G32250 34.624 439 272 6 221 656 176 602 2.63e-83 283
MS.gene70404.t1 AT2G27110 34.685 444 259 11 169 604 14 434 5.88e-81 275
MS.gene70404.t1 AT3G06250 30.069 582 350 12 25 602 174 702 4.69e-77 265
MS.gene70404.t1 AT3G06250 30.069 582 350 12 25 602 174 702 4.69e-77 265
MS.gene70404.t1 AT3G06250 30.069 582 350 12 25 602 174 702 4.69e-77 265
MS.gene70404.t1 AT5G18960 30.906 563 337 14 45 602 211 726 7.99e-77 265
MS.gene70404.t1 AT5G18960 30.906 563 337 14 45 602 211 726 7.99e-77 265
MS.gene70404.t1 AT4G38170 33.981 412 254 8 210 616 13 411 8.90e-77 259
MS.gene70404.t1 AT1G10240 27.869 610 361 22 31 601 35 604 4.15e-65 231
MS.gene70404.t1 AT1G10240 27.869 610 361 22 31 601 35 604 4.15e-65 231
MS.gene70404.t1 AT5G28530 25.484 620 402 20 15 602 24 615 3.30e-48 182
MS.gene70404.t1 AT5G28530 25.484 620 402 20 15 602 24 615 3.30e-48 182
MS.gene70404.t1 AT5G28530 25.481 624 401 21 15 602 24 619 2.07e-47 180
MS.gene70404.t1 AT5G28530 23.481 609 365 23 15 602 24 552 3.46e-30 127
MS.gene70404.t1 AT5G28530 23.491 613 364 24 15 602 24 556 2.31e-29 124

Find 120 sgRNAs with CRISPR-Local

Find 243 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCATTGGTGAATGCTTTC+TGG 0.174694 3.1:-67772852 None:intergenic
CCATCTTCTTCTATAATTTC+AGG 0.175398 3.1:-67773366 None:intergenic
TATCAAAACCACATTTAATA+AGG 0.185554 3.1:-67773188 None:intergenic
CTAAAATAGCGTGCTTTGTT+AGG 0.188876 3.1:-67771794 None:intergenic
CATATGTGAGAGACACATTT+TGG 0.193584 3.1:+67772626 MS.gene70404:CDS
AAGGAAAACATGTCTGATTT+TGG 0.198510 3.1:+67772775 MS.gene70404:CDS
TCATCTTCATGAACACTATT+TGG 0.200020 3.1:-67771470 None:intergenic
TCACTCATAAGTATTGAATT+TGG 0.202186 3.1:-67773858 None:intergenic
CAACCTCCACTTGAAATTCT+TGG 0.215469 3.1:-67772879 None:intergenic
CACCATCGATGGCGAGCTTT+TGG 0.238537 3.1:-67772394 None:intergenic
GTTGTTTACGGAATGTATTT+TGG 0.248308 3.1:+67772089 MS.gene70404:CDS
TTTGAGTAAAAGTGATTTCA+TGG 0.249102 3.1:+67772513 MS.gene70404:CDS
ATAGCTTGTGTAAGTCATTT+TGG 0.262515 3.1:+67772814 MS.gene70404:CDS
CGTAGAAGCAACTTCGTAAA+AGG 0.287052 3.1:-67773259 None:intergenic
TTCATGACTTGAGGATAAAA+TGG 0.287642 3.1:-67773976 None:intergenic
TGATCAATTATTATGGCATT+TGG 0.287902 3.1:-67772334 None:intergenic
CTTTGTGTGCTTAAGCTAAC+AGG 0.298887 3.1:+67773096 MS.gene70404:CDS
TATGCCCGGTCTATAGGTTT+TGG 0.300318 3.1:+67771554 MS.gene70404:CDS
GTCTCCGCACTTTATCTATA+TGG 0.324818 3.1:-67771964 None:intergenic
TGGTGAATGCTTTCTGGAAT+TGG 0.326923 3.1:-67772846 None:intergenic
AGGGCTGCATATGAATATTT+TGG 0.330794 3.1:+67772127 MS.gene70404:CDS
AAGTGCGGAGACTGCGACTT+GGG 0.331491 3.1:+67771975 MS.gene70404:CDS
TTGATGATAAAAGTTGTTTA+CGG 0.332175 3.1:+67772077 MS.gene70404:CDS
TTTGTGGCATATAATGAAAA+AGG 0.344495 3.1:+67772417 MS.gene70404:CDS
AGTATGAACTCATTCTTTGA+TGG 0.348820 3.1:+67772679 MS.gene70404:CDS
CTCAGAGTCTTTCTCATTGA+AGG 0.353579 3.1:-67773019 None:intergenic
CACAGTGGAGGAAGGATATA+AGG 0.358221 3.1:+67773154 MS.gene70404:CDS
AAGAGTTATGCCCGGTCTAT+AGG 0.361091 3.1:+67771548 MS.gene70404:CDS
TTTGATGATTTCCACTTCCT+TGG 0.375605 3.1:-67773527 None:intergenic
ATTGTCTTGATCAATTATTA+TGG 0.376901 3.1:-67772341 None:intergenic
ACTTATGAGTGAAGTATATC+AGG 0.377433 3.1:+67773869 MS.gene70404:CDS
TCATGCTTGCTTTGATAGAT+TGG 0.388712 3.1:+67772918 MS.gene70404:CDS
ATCAAAACCACATTTAATAA+GGG 0.391774 3.1:-67773187 None:intergenic
CATCTTCTTCTATAATTTCA+GGG 0.405722 3.1:-67773365 None:intergenic
CCTTTACTTTGAGTCGGTAC+AGG 0.411703 3.1:-67773423 None:intergenic
AAGGGCGTCCTCCTTCAAAA+AGG 0.415773 3.1:+67773442 MS.gene70404:CDS
ATTTGATGAAAGAAATCATT+GGG 0.419005 3.1:+67772597 MS.gene70404:CDS
GGAGGAAGTATTTGTATCTT+CGG 0.428709 3.1:+67771397 MS.gene70404:CDS
TAAAATAGCGTGCTTTGTTA+GGG 0.448123 3.1:-67771793 None:intergenic
AAAGTGATTTCATGGAAAAG+TGG 0.450883 3.1:+67772521 MS.gene70404:CDS
AAGTATTGAATTTGGATTGA+AGG 0.452798 3.1:-67773850 None:intergenic
CTCGCCATCGATGGTGTTTG+TGG 0.452930 3.1:+67772401 MS.gene70404:CDS
GAATATGACATTTGGTGAAA+AGG 0.456326 3.1:+67771931 MS.gene70404:CDS
CCATGGTCAATCTGTGTTGT+TGG 0.460551 3.1:+67772228 MS.gene70404:CDS
AATTAAAGACATAGTGTTTG+AGG 0.465732 3.1:+67772993 MS.gene70404:CDS
CATGGTCAATCTGTGTTGTT+GGG 0.466450 3.1:+67772229 MS.gene70404:CDS
CTAAATATAGTTCCAACCTT+AGG 0.468412 3.1:-67771497 None:intergenic
ACTCCAACAAAAGGAGCAAA+TGG 0.472118 3.1:-67772199 None:intergenic
TGTTGTTTGTTTCAATTCAA+AGG 0.475247 3.1:+67773054 MS.gene70404:CDS
CCACTGTGAGAAAATATAAG+AGG 0.477523 3.1:-67773139 None:intergenic
TTTGGGCAGATGCGAGATGT+AGG 0.483477 3.1:+67772107 MS.gene70404:CDS
AGTATTGAATTTGGATTGAA+GGG 0.484124 3.1:-67773849 None:intergenic
TTGGCTGTTCACAACATGGT+TGG 0.487761 3.1:+67772291 MS.gene70404:CDS
CCTGAAATTATAGAAGAAGA+TGG 0.488011 3.1:+67773366 MS.gene70404:CDS
TATCCTCAAGTCATGAATCA+TGG 0.488967 3.1:+67773982 MS.gene70404:CDS
CTGTACCGACTCAAAGTAAA+GGG 0.491734 3.1:+67773424 MS.gene70404:CDS
CGGAGACTGCGACTTGGGGT+TGG 0.494185 3.1:+67771980 MS.gene70404:CDS
GTTCAAGTAGTTGATAAAGT+TGG 0.495312 3.1:+67773661 MS.gene70404:CDS
AATGCATGTATTTCTTTAGA+CGG 0.501759 3.1:+67771722 MS.gene70404:CDS
CTATAGTTGTTGAAGCGAAT+GGG 0.503159 3.1:+67771903 MS.gene70404:CDS
CATTCAATCTAGCCTTGCAC+TGG 0.503380 3.1:-67771703 None:intergenic
TATTTGATGAAAGAAATCAT+TGG 0.505297 3.1:+67772596 MS.gene70404:CDS
AAGTGATTTCATGGAAAAGT+GGG 0.506412 3.1:+67772522 MS.gene70404:CDS
TCTATAGTTGTTGAAGCGAA+TGG 0.507984 3.1:+67771902 MS.gene70404:CDS
GCTTGCTTTGATAGATTGGA+AGG 0.517556 3.1:+67772922 MS.gene70404:CDS
AATGTGTCTCTCACATATGT+AGG 0.518863 3.1:-67772622 None:intergenic
CTTTACTTTGAGTCGGTACA+GGG 0.521344 3.1:-67773422 None:intergenic
GTGGAGCTTTGAATATGCTA+AGG 0.523480 3.1:+67769887 None:intergenic
TGGTGATTTACTCCAACAAA+AGG 0.525957 3.1:-67772208 None:intergenic
TCAGGATAACGAATGGTTGA+AGG 0.526171 3.1:+67772570 MS.gene70404:CDS
TGGATCCTCGTTTGAAAAGG+AGG 0.528466 3.1:+67771831 MS.gene70404:CDS
GGGTATGAGAATATGACATT+TGG 0.528947 3.1:+67771923 MS.gene70404:CDS
GAAGATGAAATACCTAAGGT+TGG 0.529175 3.1:+67771485 MS.gene70404:CDS
TTCCAAAAGCTCGCCATCGA+TGG 0.531681 3.1:+67772392 MS.gene70404:CDS
TTGGGCAGATGCGAGATGTA+GGG 0.538615 3.1:+67772108 MS.gene70404:CDS
TGTTGTGAACAGCCAAGTAA+AGG 0.547394 3.1:-67772284 None:intergenic
TAACTCCAAAACCTATAGAC+CGG 0.548272 3.1:-67771559 None:intergenic
AGGATACTAAGACCTTTACT+TGG 0.548532 3.1:+67772272 MS.gene70404:CDS
CAGGATAACGAATGGTTGAA+GGG 0.548682 3.1:+67772571 MS.gene70404:CDS
CTTTATCTATATGGTTCCTA+CGG 0.551458 3.1:-67771955 None:intergenic
GAAGGAAATAATAGATGTGA+TGG 0.552319 3.1:+67771437 MS.gene70404:CDS
AGGCATACCCTTATTAAATG+TGG 0.553411 3.1:+67773180 MS.gene70404:CDS
TTACTTGGCTGTTCACAACA+TGG 0.555090 3.1:+67772287 MS.gene70404:CDS
ATTCCAAGAATTTCAAGTGG+AGG 0.555252 3.1:+67772876 MS.gene70404:CDS
TTCAGGGCATGTTTCTTGAG+AGG 0.556231 3.1:-67773349 None:intergenic
ATTTGTATCTTCGGATGAAG+AGG 0.560669 3.1:+67771406 MS.gene70404:CDS
ATTGAAAGATAAAGTTGAGA+AGG 0.561801 3.1:+67772756 MS.gene70404:CDS
TTAGAACTCAATGATCAAGC+TGG 0.567016 3.1:+67771854 MS.gene70404:CDS
CCTGTACCGACTCAAAGTAA+AGG 0.567989 3.1:+67773423 MS.gene70404:CDS
AAAGTGCGGAGACTGCGACT+TGG 0.575984 3.1:+67771974 MS.gene70404:CDS
TCGCTTCAACAACTATAGAT+CGG 0.588019 3.1:-67771898 None:intergenic
CGTGTTATTGATGACGACGA+TGG 0.590569 3.1:-67774140 None:intergenic
GAATATGCTAAGGAAAGGAA+CGG 0.591118 3.1:+67769897 None:intergenic
ACATGGTTGGAATGCATGCA+TGG 0.592737 3.1:+67772304 MS.gene70404:CDS
TTGAACTTCAGGATAACGAA+TGG 0.592982 3.1:+67772563 MS.gene70404:CDS
ACACCATGATTCATGACTTG+AGG 0.597741 3.1:-67773985 None:intergenic
GGACGCCCTTTACTTTGAGT+CGG 0.601736 3.1:-67773429 None:intergenic
TCATGAAGATGAAATACCTA+AGG 0.606940 3.1:+67771481 MS.gene70404:CDS
AACTCCAAAACCTATAGACC+GGG 0.618933 3.1:-67771558 None:intergenic
AAAGGAACGGATGACAATGA+AGG 0.622220 3.1:+67769910 MS.gene70404:CDS
CTGTTAGCTTAAGCACACAA+AGG 0.625605 3.1:-67773095 None:intergenic
GCTTTGAATATGCTAAGGAA+AGG 0.627917 3.1:+67769892 None:intergenic
AGTATTACAAGAGTTATGCC+CGG 0.630025 3.1:+67771540 MS.gene70404:CDS
AGTGCGGAGACTGCGACTTG+GGG 0.633117 3.1:+67771976 MS.gene70404:CDS
TATGCCACAAACACCATCGA+TGG 0.638359 3.1:-67772405 None:intergenic
TTTACTCTAGCATGTAGTCG+TGG 0.642195 3.1:+67771623 MS.gene70404:CDS
AAAATTCCAAGAATTTCAAG+TGG 0.644675 3.1:+67772873 MS.gene70404:CDS
ACTTGGGGTTGGAGATGCTG+AGG 0.644897 3.1:+67771991 MS.gene70404:CDS
AAATCATCAAAGTCAACAAG+AGG 0.645487 3.1:+67773539 MS.gene70404:CDS
GGAGGAAGGATATAAGGCGA+AGG 0.647816 3.1:+67773160 MS.gene70404:CDS
AGGATAACGAATGGTTGAAG+GGG 0.650586 3.1:+67772572 MS.gene70404:CDS
CATTTGGTGAAAAGGACCGT+AGG 0.656494 3.1:+67771939 MS.gene70404:CDS
TGTGAGAAAATATAAGAGGA+CGG 0.656653 3.1:-67773135 None:intergenic
TTTGTTGGAGTAAATCACCA+TGG 0.661689 3.1:+67772211 MS.gene70404:CDS
CTTGCAATTTAGATGCACAC+AGG 0.664144 3.1:-67773633 None:intergenic
TTTAGGAGGAATGAACATGG+TGG 0.670141 3.1:+67773810 MS.gene70404:CDS
ATGTGCTTTACTGTCAAGCG+AGG 0.675011 3.1:+67772252 MS.gene70404:CDS
CCAACAACACAGATTGACCA+TGG 0.675112 3.1:-67772228 None:intergenic
GATGAAGAGGAAATCAACGA+AGG 0.688631 3.1:+67771419 MS.gene70404:CDS
GGAACCATATAGATAAAGTG+CGG 0.699737 3.1:+67771960 MS.gene70404:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAAATGAAAAAAAGT+TGG - chr3.1:67770860-67770879 None:intergenic 10.0%
!! ACATAAATAAATATAAAATG+AGG + chr3.1:67770884-67770903 MS.gene70404:intron 10.0%
!! TTAATTAAAAAAAACATAAG+AGG - chr3.1:67774051-67774070 None:intergenic 10.0%
!! AAAAAGTAAATAAAACAAAC+AGG - chr3.1:67771351-67771370 None:intergenic 15.0%
!! AAAAGTAAATAAAACAAACA+GGG - chr3.1:67771350-67771369 None:intergenic 15.0%
!! ACTAAAAATATAAGTGATAT+AGG - chr3.1:67771309-67771328 None:intergenic 15.0%
!! AGTAAATTGTATTGAATTAA+TGG - chr3.1:67770210-67770229 None:intergenic 15.0%
!!! ATTTTTATGCAATTAGATAT+TGG - chr3.1:67769962-67769981 None:intergenic 15.0%
!!! TTCATATTTTGAATTATTAC+AGG + chr3.1:67774008-67774027 MS.gene70404:CDS 15.0%
!!! TTTTAGAAGTAATAAGATTT+TGG + chr3.1:67771811-67771830 MS.gene70404:CDS 15.0%
!! AAAAGAAATATATCTACTAG+TGG - chr3.1:67770374-67770393 None:intergenic 20.0%
!! AACAACTTAGAAACATTATT+AGG - chr3.1:67770348-67770367 None:intergenic 20.0%
!! ATCAAAACCACATTTAATAA+GGG - chr3.1:67773190-67773209 None:intergenic 20.0%
!! ATTGTCTTGATCAATTATTA+TGG - chr3.1:67772344-67772363 None:intergenic 20.0%
!! ATTTGATGAAAGAAATCATT+GGG + chr3.1:67772597-67772616 MS.gene70404:CDS 20.0%
!! CTAATGCAATAAATTCAAAA+AGG - chr3.1:67771376-67771395 None:intergenic 20.0%
!! TAAAAATATATGCTAAGGAA+AGG + chr3.1:67769975-67769994 MS.gene70404:intron 20.0%
!! TAAGACTAATCAATACAATA+TGG + chr3.1:67770141-67770160 MS.gene70404:intron 20.0%
!! TAAGTAATGGTTATGTAAAT+TGG - chr3.1:67770507-67770526 None:intergenic 20.0%
!! TATCAAAACCACATTTAATA+AGG - chr3.1:67773191-67773210 None:intergenic 20.0%
!! TATTTGATGAAAGAAATCAT+TGG + chr3.1:67772596-67772615 MS.gene70404:CDS 20.0%
!! TTGCATAAAAATATATGCTA+AGG + chr3.1:67769970-67769989 MS.gene70404:intron 20.0%
!!! ATTTGATTTAGAAACTGATA+TGG + chr3.1:67771242-67771261 MS.gene70404:intron 20.0%
!!! CAATATCAATGAAGATTTTA+TGG + chr3.1:67770001-67770020 MS.gene70404:intron 20.0%
!!! GTCTAATTTTCAATATTTGA+TGG + chr3.1:67773605-67773624 MS.gene70404:intron 20.0%
!!! TAGTAGATATATTTCTTTTG+AGG + chr3.1:67770375-67770394 MS.gene70404:intron 20.0%
!!! TGATTTTGGTTCATTTAATA+CGG + chr3.1:67772789-67772808 MS.gene70404:CDS 20.0%
!!! TGTCATTTTTTTCTTTTTGA+AGG + chr3.1:67774097-67774116 MS.gene70404:intron 20.0%
!!! TTGATGATAAAAGTTGTTTA+CGG + chr3.1:67772077-67772096 MS.gene70404:CDS 20.0%
!!! TTGTTACATGTATGTTTTTA+GGG + chr3.1:67773774-67773793 MS.gene70404:intron 20.0%
!!! TTTGTTACATGTATGTTTTT+AGG + chr3.1:67773773-67773792 MS.gene70404:intron 20.0%
!!! TTTTGAATTTATTGCATTAG+TGG + chr3.1:67771376-67771395 MS.gene70404:intron 20.0%
! AAAATTCCAAGAATTTCAAG+TGG + chr3.1:67772873-67772892 MS.gene70404:CDS 25.0%
! AAATTAACAGATTGCTAGAT+AGG - chr3.1:67770666-67770685 None:intergenic 25.0%
! AATGCATGTATTTCTTTAGA+CGG + chr3.1:67771722-67771741 MS.gene70404:CDS 25.0%
! AATTAAAGACATAGTGTTTG+AGG + chr3.1:67772993-67773012 MS.gene70404:CDS 25.0%
! ACTAAACTTAGTAGCAAAAA+TGG + chr3.1:67771581-67771600 MS.gene70404:CDS 25.0%
! ATTGAAAGATAAAGTTGAGA+AGG + chr3.1:67772756-67772775 MS.gene70404:CDS 25.0%
! CATCTTCTTCTATAATTTCA+GGG - chr3.1:67773368-67773387 None:intergenic 25.0%
! TAAAATGGAACCTAAATAAC+AGG - chr3.1:67773964-67773983 None:intergenic 25.0%
! TCTTGATTATTAACCAAGTA+AGG + chr3.1:67770298-67770317 MS.gene70404:intron 25.0%
! TGAATAAACTTGCAAAAAAG+AGG + chr3.1:67773490-67773509 MS.gene70404:CDS 25.0%
! TGATCAATTATTATGGCATT+TGG - chr3.1:67772337-67772356 None:intergenic 25.0%
! TTAGAAACATTATTAGGATG+TGG - chr3.1:67770342-67770361 None:intergenic 25.0%
! TTTGAGTAAAAGTGATTTCA+TGG + chr3.1:67772513-67772532 MS.gene70404:CDS 25.0%
! TTTGTAAAACCTTATGTGTT+AGG + chr3.1:67770927-67770946 MS.gene70404:intron 25.0%
! TTTGTGGCATATAATGAAAA+AGG + chr3.1:67772417-67772436 MS.gene70404:CDS 25.0%
!! AAATTCTTGGAATTTTGCAT+TGG - chr3.1:67772869-67772888 None:intergenic 25.0%
!! AAGTATGTTTCCTGTTATTT+AGG + chr3.1:67773951-67773970 MS.gene70404:intron 25.0%
!! AGTATTGAATTTGGATTGAA+GGG - chr3.1:67773852-67773871 None:intergenic 25.0%
!! GTAGAATTTGCTTTAGTTTA+GGG - chr3.1:67770998-67771017 None:intergenic 25.0%
!! TGTAGAATTTGCTTTAGTTT+AGG - chr3.1:67770999-67771018 None:intergenic 25.0%
!! TGTTGTTTGTTTCAATTCAA+AGG + chr3.1:67773054-67773073 MS.gene70404:CDS 25.0%
!! TTGTTTACGGAATGTATTTT+GGG + chr3.1:67772090-67772109 MS.gene70404:CDS 25.0%
!!! AAGACTCTTTTGATTACAAT+TGG + chr3.1:67770176-67770195 MS.gene70404:intron 25.0%
!!! AAGTATTGAATTTGGATTGA+AGG - chr3.1:67773853-67773872 None:intergenic 25.0%
!!! AATTTTCAATATTTGATGGC+AGG + chr3.1:67773609-67773628 MS.gene70404:intron 25.0%
!!! TCACTCATAAGTATTGAATT+TGG - chr3.1:67773861-67773880 None:intergenic 25.0%
!!! TGTGGTTTTGATAATTTAGT+TGG + chr3.1:67773198-67773217 MS.gene70404:CDS 25.0%
!!! TGTTACATGTATGTTTTTAG+GGG + chr3.1:67773775-67773794 MS.gene70404:intron 25.0%
!!! TTTCTGGAACATTATTATTG+TGG + chr3.1:67773920-67773939 MS.gene70404:intron 25.0%
AAAGTGATTTCATGGAAAAG+TGG + chr3.1:67772521-67772540 MS.gene70404:CDS 30.0%
AAATCATCAAAGTCAACAAG+AGG + chr3.1:67773539-67773558 MS.gene70404:CDS 30.0%
AAGTGATTTCATGGAAAAGT+GGG + chr3.1:67772522-67772541 MS.gene70404:CDS 30.0%
ACTGATATTATGTCCTATAC+AGG - chr3.1:67770277-67770296 None:intergenic 30.0%
ACTTATGAGTGAAGTATATC+AGG + chr3.1:67773869-67773888 MS.gene70404:CDS 30.0%
AGTATGAACTCATTCTTTGA+TGG + chr3.1:67772679-67772698 MS.gene70404:CDS 30.0%
CAATACAATATGGTAGTACA+AGG + chr3.1:67770151-67770170 MS.gene70404:intron 30.0%
CATAACCATTACTTATGATG+CGG + chr3.1:67770512-67770531 MS.gene70404:intron 30.0%
CCATCTTCTTCTATAATTTC+AGG - chr3.1:67773369-67773388 None:intergenic 30.0%
CCTGAAATTATAGAAGAAGA+TGG + chr3.1:67773366-67773385 MS.gene70404:CDS 30.0%
CTAAATATAGTTCCAACCTT+AGG - chr3.1:67771500-67771519 None:intergenic 30.0%
CTATACAGGTCAATGTAAAA+AGG - chr3.1:67770263-67770282 None:intergenic 30.0%
CTTTATCTATATGGTTCCTA+CGG - chr3.1:67771958-67771977 None:intergenic 30.0%
GAAGGAAATAATAGATGTGA+TGG + chr3.1:67771437-67771456 MS.gene70404:CDS 30.0%
GTAAGTTCACTCCTATATAT+TGG + chr3.1:67771153-67771172 MS.gene70404:intron 30.0%
TATAACAAAAATCCAGTGCA+AGG + chr3.1:67771691-67771710 MS.gene70404:CDS 30.0%
TATTATGAGTGCTTCATGTT+GGG - chr3.1:67770588-67770607 None:intergenic 30.0%
TCATCTTCATGAACACTATT+TGG - chr3.1:67771473-67771492 None:intergenic 30.0%
TCATGAAGATGAAATACCTA+AGG + chr3.1:67771481-67771500 MS.gene70404:CDS 30.0%
TGAATTTATTGCATTAGTGG+AGG + chr3.1:67771379-67771398 MS.gene70404:intron 30.0%
TGGATGATAAGCCAATATAT+AGG - chr3.1:67771167-67771186 None:intergenic 30.0%
TGTGAGAAAATATAAGAGGA+CGG - chr3.1:67773138-67773157 None:intergenic 30.0%
TTAGGATAACAATAGCTCTT+TGG + chr3.1:67770064-67770083 MS.gene70404:intron 30.0%
TTATTATGAGTGCTTCATGT+TGG - chr3.1:67770589-67770608 None:intergenic 30.0%
TTCATGACTTGAGGATAAAA+TGG - chr3.1:67773979-67773998 None:intergenic 30.0%
! AAGGAAAACATGTCTGATTT+TGG + chr3.1:67772775-67772794 MS.gene70404:CDS 30.0%
! ATACATGGTACTTTTAATGG+TGG + chr3.1:67770538-67770557 MS.gene70404:intron 30.0%
! ATATGTGAGAGACACATTTT+GGG + chr3.1:67772627-67772646 MS.gene70404:CDS 30.0%
! ATCTGCAATTGCATTTTTCA+TGG - chr3.1:67772368-67772387 None:intergenic 30.0%
! ATTTTCCTGTCACAGTTTTA+CGG - chr3.1:67771080-67771099 None:intergenic 30.0%
! CACAATTTGATCAACTTTTG+AGG - chr3.1:67773472-67773491 None:intergenic 30.0%
! CCTATACATGGTACTTTTAA+TGG + chr3.1:67770535-67770554 MS.gene70404:intron 30.0%
! CTTTTTACATTGACCTGTAT+AGG + chr3.1:67770261-67770280 MS.gene70404:intron 30.0%
! GAATATGACATTTGGTGAAA+AGG + chr3.1:67771931-67771950 MS.gene70404:CDS 30.0%
! GATTGAAGATTTTGAACTTC+AGG + chr3.1:67772552-67772571 MS.gene70404:CDS 30.0%
! GTTGTTTACGGAATGTATTT+TGG + chr3.1:67772089-67772108 MS.gene70404:CDS 30.0%
! GTTTGTTGACATGTAGAAAA+AGG + chr3.1:67770464-67770483 MS.gene70404:intron 30.0%
! TAAAATAGCGTGCTTTGTTA+GGG - chr3.1:67771796-67771815 None:intergenic 30.0%
! TTTTCTACATGTCAACAAAC+AGG - chr3.1:67770464-67770483 None:intergenic 30.0%
!! ATAGCTTGTGTAAGTCATTT+TGG + chr3.1:67772814-67772833 MS.gene70404:CDS 30.0%
!! CCATTAAAAGTACCATGTAT+AGG - chr3.1:67770538-67770557 None:intergenic 30.0%
!! GTTCAAGTAGTTGATAAAGT+TGG + chr3.1:67773661-67773680 MS.gene70404:CDS 30.0%
!! TTGCACTGGATTTTTGTTAT+AGG - chr3.1:67771692-67771711 None:intergenic 30.0%
!!! GTTACATGTATGTTTTTAGG+GGG + chr3.1:67773776-67773795 MS.gene70404:intron 30.0%
!!! TTACATGTATGTTTTTAGGG+GGG + chr3.1:67773777-67773796 MS.gene70404:intron 30.0%
AAAAAGGTTCCAGAAAAGCT+AGG + chr3.1:67772433-67772452 MS.gene70404:CDS 35.0%
AAATGCAGAAAAGCCTTACT+TGG - chr3.1:67770314-67770333 None:intergenic 35.0%
AATGTGTCTCTCACATATGT+AGG - chr3.1:67772625-67772644 None:intergenic 35.0%
AGGATACTAAGACCTTTACT+TGG + chr3.1:67772272-67772291 MS.gene70404:CDS 35.0%
AGGCATACCCTTATTAAATG+TGG + chr3.1:67773180-67773199 MS.gene70404:CDS 35.0%
AGTAGCAAAAATGGAGATGA+TGG + chr3.1:67771590-67771609 MS.gene70404:CDS 35.0%
AGTATTACAAGAGTTATGCC+CGG + chr3.1:67771540-67771559 MS.gene70404:CDS 35.0%
ATTTGTATCTTCGGATGAAG+AGG + chr3.1:67771406-67771425 MS.gene70404:CDS 35.0%
CCACTGTGAGAAAATATAAG+AGG - chr3.1:67773142-67773161 None:intergenic 35.0%
CTATAGTTGTTGAAGCGAAT+GGG + chr3.1:67771903-67771922 MS.gene70404:CDS 35.0%
CTATTTCAACTACACTTCTG+AGG - chr3.1:67771112-67771131 None:intergenic 35.0%
GAAGATGAAATACCTAAGGT+TGG + chr3.1:67771485-67771504 MS.gene70404:CDS 35.0%
GATTACAATTTAGTACAGCC+TGG + chr3.1:67770086-67770105 MS.gene70404:intron 35.0%
GGAACCATATAGATAAAGTG+CGG + chr3.1:67771960-67771979 MS.gene70404:CDS 35.0%
GGGTATGAGAATATGACATT+TGG + chr3.1:67771923-67771942 MS.gene70404:CDS 35.0%
TAACTCCAAAACCTATAGAC+CGG - chr3.1:67771562-67771581 None:intergenic 35.0%
TATCATGTCATCATCACGTT+AGG + chr3.1:67770046-67770065 MS.gene70404:intron 35.0%
TATCCTCAAGTCATGAATCA+TGG + chr3.1:67773982-67774001 MS.gene70404:CDS 35.0%
TATGAGGGAGGAAGAAATTA+TGG + chr3.1:67770742-67770761 MS.gene70404:intron 35.0%
TCATGCTTGCTTTGATAGAT+TGG + chr3.1:67772918-67772937 MS.gene70404:CDS 35.0%
TCGCTTCAACAACTATAGAT+CGG - chr3.1:67771901-67771920 None:intergenic 35.0%
TCTATAGTTGTTGAAGCGAA+TGG + chr3.1:67771902-67771921 MS.gene70404:CDS 35.0%
TGGTGATTTACTCCAACAAA+AGG - chr3.1:67772211-67772230 None:intergenic 35.0%
TTAATCACTTGATAGAGCGA+TGG - chr3.1:67771187-67771206 None:intergenic 35.0%
TTAGAACTCAATGATCAAGC+TGG + chr3.1:67771854-67771873 MS.gene70404:CDS 35.0%
TTGAACTTCAGGATAACGAA+TGG + chr3.1:67772563-67772582 MS.gene70404:CDS 35.0%
TTTGTTGGAGTAAATCACCA+TGG + chr3.1:67772211-67772230 MS.gene70404:CDS 35.0%
! AGGGCTGCATATGAATATTT+TGG + chr3.1:67772127-67772146 MS.gene70404:CDS 35.0%
! ATGAGGTGTCAAGTTATTAG+TGG + chr3.1:67770901-67770920 MS.gene70404:intron 35.0%
! ATTCCAAGAATTTCAAGTGG+AGG + chr3.1:67772876-67772895 MS.gene70404:CDS 35.0%
! CATATGTGAGAGACACATTT+TGG + chr3.1:67772626-67772645 MS.gene70404:CDS 35.0%
! CCTCTTATATTTTCTCACAG+TGG + chr3.1:67773139-67773158 MS.gene70404:CDS 35.0%
! CTAAAATAGCGTGCTTTGTT+AGG - chr3.1:67771797-67771816 None:intergenic 35.0%
! CTTATATTTTCTCACAGTGG+AGG + chr3.1:67773142-67773161 MS.gene70404:CDS 35.0%
! CTTTTACGAAGTTGCTTCTA+CGG + chr3.1:67773260-67773279 MS.gene70404:CDS 35.0%
! GCTTTAGTTTAGGGATTAGT+GGG - chr3.1:67770989-67771008 None:intergenic 35.0%
! GGACAACATTGATTATGAAG+AGG - chr3.1:67770242-67770261 None:intergenic 35.0%
! TGCTTTAGTTTAGGGATTAG+TGG - chr3.1:67770990-67771009 None:intergenic 35.0%
! TTTGAGGACTTCCTTTTTGA+AGG - chr3.1:67773456-67773475 None:intergenic 35.0%
! TTTGATGATTTCCACTTCCT+TGG - chr3.1:67773530-67773549 None:intergenic 35.0%
! TTTTGGATCCTCGTTTGAAA+AGG + chr3.1:67771828-67771847 MS.gene70404:CDS 35.0%
!! ATGACAATGAAGGTGTTGAT+TGG + chr3.1:67769920-67769939 MS.gene70404:intron 35.0%
!! GGAGGAAGTATTTGTATCTT+CGG + chr3.1:67771397-67771416 MS.gene70404:CDS 35.0%
!!! ACTTCCTTGGCTTCTTTTTT+GGG - chr3.1:67773517-67773536 None:intergenic 35.0%
!!! AGTTTTAGGAGGAATGAACA+TGG + chr3.1:67773807-67773826 MS.gene70404:CDS 35.0%
AAAGGAACGGATGACAATGA+AGG + chr3.1:67769910-67769929 MS.gene70404:CDS 40.0%
AACTCCAAAACCTATAGACC+GGG - chr3.1:67771561-67771580 None:intergenic 40.0%
ACACCATGATTCATGACTTG+AGG - chr3.1:67773988-67774007 None:intergenic 40.0%
ACTCCAACAAAAGGAGCAAA+TGG - chr3.1:67772202-67772221 None:intergenic 40.0%
AGGATAACGAATGGTTGAAG+GGG + chr3.1:67772572-67772591 MS.gene70404:CDS 40.0%
ATAGGCCGCATCATAAGTAA+TGG - chr3.1:67770520-67770539 None:intergenic 40.0%
CAAAAAAGAAGCCAAGGAAG+TGG + chr3.1:67773516-67773535 MS.gene70404:CDS 40.0%
CAAAAGAATCTTGCACTACC+AGG - chr3.1:67770107-67770126 None:intergenic 40.0%
CAACCTCCACTTGAAATTCT+TGG - chr3.1:67772882-67772901 None:intergenic 40.0%
CAGGATAACGAATGGTTGAA+GGG + chr3.1:67772571-67772590 MS.gene70404:CDS 40.0%
CGTAGAAGCAACTTCGTAAA+AGG - chr3.1:67773262-67773281 None:intergenic 40.0%
CTCAGAGTCTTTCTCATTGA+AGG - chr3.1:67773022-67773041 None:intergenic 40.0%
CTTGCAATTTAGATGCACAC+AGG - chr3.1:67773636-67773655 None:intergenic 40.0%
CTTTACTTTGAGTCGGTACA+GGG - chr3.1:67773425-67773444 None:intergenic 40.0%
CTTTGTGTGCTTAAGCTAAC+AGG + chr3.1:67773096-67773115 MS.gene70404:CDS 40.0%
GATGAAGAGGAAATCAACGA+AGG + chr3.1:67771419-67771438 MS.gene70404:CDS 40.0%
GCTTGCTTTGATAGATTGGA+AGG + chr3.1:67772922-67772941 MS.gene70404:CDS 40.0%
GGAATATTGAGACAGTTGTC+AGG + chr3.1:67770396-67770415 MS.gene70404:intron 40.0%
GTCTCCGCACTTTATCTATA+TGG - chr3.1:67771967-67771986 None:intergenic 40.0%
TCAATCCGTAAAACTGTGAC+AGG + chr3.1:67771072-67771091 MS.gene70404:intron 40.0%
TCAGGATAACGAATGGTTGA+AGG + chr3.1:67772570-67772589 MS.gene70404:CDS 40.0%
TCATGTTGGGAAACTTGTGT+TGG - chr3.1:67770575-67770594 None:intergenic 40.0%
TGTTGTGAACAGCCAAGTAA+AGG - chr3.1:67772287-67772306 None:intergenic 40.0%
TTACTTGGCTGTTCACAACA+TGG + chr3.1:67772287-67772306 MS.gene70404:CDS 40.0%
TTTACTCTAGCATGTAGTCG+TGG + chr3.1:67771623-67771642 MS.gene70404:CDS 40.0%
TTTAGGAGGAATGAACATGG+TGG + chr3.1:67773810-67773829 MS.gene70404:CDS 40.0%
! CATGGTCAATCTGTGTTGTT+GGG + chr3.1:67772229-67772248 MS.gene70404:CDS 40.0%
! CTGTTAGCTTAAGCACACAA+AGG - chr3.1:67773098-67773117 None:intergenic 40.0%
! TATTTTCTCACAGTGGAGGA+AGG + chr3.1:67773146-67773165 MS.gene70404:CDS 40.0%
! TCCAGAAAACTAAAGAGCAC+TGG - chr3.1:67773908-67773927 None:intergenic 40.0%
! TCTAACCTCCTTTTCAAACG+AGG - chr3.1:67771839-67771858 None:intergenic 40.0%
! TTGCATTGGTGAATGCTTTC+TGG - chr3.1:67772855-67772874 None:intergenic 40.0%
!! AAGATGGGTTGGTGATATGA+GGG + chr3.1:67770727-67770746 MS.gene70404:intron 40.0%
!! ATGCCATTTGCTCCTTTTGT+TGG + chr3.1:67772196-67772215 MS.gene70404:CDS 40.0%
!! CTGTACCGACTCAAAGTAAA+GGG + chr3.1:67773424-67773443 MS.gene70404:CDS 40.0%
!! TCACAGTTTTACGGATTGAG+AGG - chr3.1:67771071-67771090 None:intergenic 40.0%
!! TGGTGAATGCTTTCTGGAAT+TGG - chr3.1:67772849-67772868 None:intergenic 40.0%
!!! CACTTCCTTGGCTTCTTTTT+TGG - chr3.1:67773518-67773537 None:intergenic 40.0%
!!! TCCAGTGCTCTTTAGTTTTC+TGG + chr3.1:67773904-67773923 MS.gene70404:intron 40.0%
AAGAGTTATGCCCGGTCTAT+AGG + chr3.1:67771548-67771567 MS.gene70404:CDS 45.0%
ACATGGTTGGAATGCATGCA+TGG + chr3.1:67772304-67772323 MS.gene70404:CDS 45.0%
AGCATTTCTTTCTCGTGTGG+TGG - chr3.1:67770826-67770845 None:intergenic 45.0%
AGGACCCAAAAAAGAAGCCA+AGG + chr3.1:67773510-67773529 MS.gene70404:CDS 45.0%
ATGTGCTTTACTGTCAAGCG+AGG + chr3.1:67772252-67772271 MS.gene70404:CDS 45.0%
CACAGTGGAGGAAGGATATA+AGG + chr3.1:67773154-67773173 MS.gene70404:CDS 45.0%
CCAACAACACAGATTGACCA+TGG - chr3.1:67772231-67772250 None:intergenic 45.0%
CCATGGTCAATCTGTGTTGT+TGG + chr3.1:67772228-67772247 MS.gene70404:CDS 45.0%
CCTTTACTTTGAGTCGGTAC+AGG - chr3.1:67773426-67773445 None:intergenic 45.0%
CTTATGATGCGGCCTATACA+TGG + chr3.1:67770523-67770542 MS.gene70404:intron 45.0%
GCAAACGCACCTAACACATA+AGG - chr3.1:67770939-67770958 None:intergenic 45.0%
GCAAAGTGACGACACAAGAT+GGG + chr3.1:67770712-67770731 MS.gene70404:intron 45.0%
TATGCCACAAACACCATCGA+TGG - chr3.1:67772408-67772427 None:intergenic 45.0%
TGCAAAGTGACGACACAAGA+TGG + chr3.1:67770711-67770730 MS.gene70404:intron 45.0%
TGCAGCATTTCTTTCTCGTG+TGG - chr3.1:67770829-67770848 None:intergenic 45.0%
TGGATCCTCGTTTGAAAAGG+AGG + chr3.1:67771831-67771850 MS.gene70404:CDS 45.0%
TTCAGGGCATGTTTCTTGAG+AGG - chr3.1:67773352-67773371 None:intergenic 45.0%
TTGGCTGTTCACAACATGGT+TGG + chr3.1:67772291-67772310 MS.gene70404:CDS 45.0%
! CATTTGGTGAAAAGGACCGT+AGG + chr3.1:67771939-67771958 MS.gene70404:CDS 45.0%
! CTTTCTCGTGTGGTGGAAAA+CGG - chr3.1:67770819-67770838 None:intergenic 45.0%
! TATGCCCGGTCTATAGGTTT+TGG + chr3.1:67771554-67771573 MS.gene70404:CDS 45.0%
! TGTGAGAGACACATTTTGGG+CGG + chr3.1:67772630-67772649 MS.gene70404:CDS 45.0%
!! CAAGATGGGTTGGTGATATG+AGG + chr3.1:67770726-67770745 MS.gene70404:intron 45.0%
!! CATTCAATCTAGCCTTGCAC+TGG - chr3.1:67771706-67771725 None:intergenic 45.0%
!! CCTGTACCGACTCAAAGTAA+AGG + chr3.1:67773423-67773442 MS.gene70404:CDS 45.0%
!! CGTGTTATTGATGACGACGA+TGG - chr3.1:67774143-67774162 None:intergenic 45.0%
!! CTGTGTGCATTTGACTTGTG+TGG - chr3.1:67770638-67770657 None:intergenic 45.0%
!! GAGGACTTCCTTTTTGAAGG+AGG - chr3.1:67773453-67773472 None:intergenic 45.0%
!! GAGTGTCTACCTAGCTTTTC+TGG - chr3.1:67772445-67772464 None:intergenic 45.0%
!! GTTTTACGGATTGAGAGGAG+TGG - chr3.1:67771066-67771085 None:intergenic 45.0%
!!! AGGGGGGACACATTAGTTTT+AGG + chr3.1:67773793-67773812 MS.gene70404:intron 45.0%
!!! GGGGACACATTAGTTTTAGG+AGG + chr3.1:67773796-67773815 MS.gene70404:CDS 45.0%
AGTGACGACACAAGATGGGT+TGG + chr3.1:67770716-67770735 MS.gene70404:intron 50.0%
GAGAGGAGTGGAAAAACCGT+CGG - chr3.1:67771054-67771073 None:intergenic 50.0%
GGACGCCCTTTACTTTGAGT+CGG - chr3.1:67773432-67773451 None:intergenic 50.0%
GGAGGAAGGATATAAGGCGA+AGG + chr3.1:67773160-67773179 MS.gene70404:CDS 50.0%
TTCCAAAAGCTCGCCATCGA+TGG + chr3.1:67772392-67772411 MS.gene70404:CDS 50.0%
TTGGGCAGATGCGAGATGTA+GGG + chr3.1:67772108-67772127 MS.gene70404:CDS 50.0%
TTTGGGCAGATGCGAGATGT+AGG + chr3.1:67772107-67772126 MS.gene70404:CDS 50.0%
! GTGAGAGACACATTTTGGGC+GGG + chr3.1:67772631-67772650 MS.gene70404:CDS 50.0%
!! AAGGGCGTCCTCCTTCAAAA+AGG + chr3.1:67773442-67773461 MS.gene70404:CDS 50.0%
!! ATGGGTTGGTGATATGAGGG+AGG + chr3.1:67770730-67770749 MS.gene70404:intron 50.0%
AAAGTGCGGAGACTGCGACT+TGG + chr3.1:67771974-67771993 MS.gene70404:CDS 55.0%
AAGTGCGGAGACTGCGACTT+GGG + chr3.1:67771975-67771994 MS.gene70404:CDS 55.0%
ACTTGGGGTTGGAGATGCTG+AGG + chr3.1:67771991-67772010 MS.gene70404:CDS 55.0%
CTCGCCATCGATGGTGTTTG+TGG + chr3.1:67772401-67772420 MS.gene70404:CDS 55.0%
! CACCATCGATGGCGAGCTTT+TGG - chr3.1:67772397-67772416 None:intergenic 55.0%
AGTGCGGAGACTGCGACTTG+GGG + chr3.1:67771976-67771995 MS.gene70404:CDS 60.0%
AAACCGTCGGCGCATGCGCA+AGG - chr3.1:67771041-67771060 None:intergenic 65.0%
ACTCCTTGCGCATGCGCCGA+CGG + chr3.1:67771035-67771054 MS.gene70404:intron 65.0%
TCGGCGCATGCGCAAGGAGT+GGG - chr3.1:67771035-67771054 None:intergenic 65.0%
! CGGAGACTGCGACTTGGGGT+TGG + chr3.1:67771980-67771999 MS.gene70404:CDS 65.0%
GTCGGCGCATGCGCAAGGAG+TGG - chr3.1:67771036-67771055 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 67769901 67774172 67769901 ID=MS.gene70404
chr3.1 mRNA 67769901 67774172 67769901 ID=MS.gene70404.t1;Parent=MS.gene70404
chr3.1 exon 67769901 67769931 67769901 ID=MS.gene70404.t1.exon1;Parent=MS.gene70404.t1
chr3.1 CDS 67769901 67769931 67769901 ID=cds.MS.gene70404.t1;Parent=MS.gene70404.t1
chr3.1 exon 67771396 67773560 67771396 ID=MS.gene70404.t1.exon2;Parent=MS.gene70404.t1
chr3.1 CDS 67771396 67773560 67771396 ID=cds.MS.gene70404.t1;Parent=MS.gene70404.t1
chr3.1 exon 67773631 67773702 67773631 ID=MS.gene70404.t1.exon3;Parent=MS.gene70404.t1
chr3.1 CDS 67773631 67773702 67773631 ID=cds.MS.gene70404.t1;Parent=MS.gene70404.t1
chr3.1 exon 67773795 67773890 67773795 ID=MS.gene70404.t1.exon4;Parent=MS.gene70404.t1
chr3.1 CDS 67773795 67773890 67773795 ID=cds.MS.gene70404.t1;Parent=MS.gene70404.t1
chr3.1 exon 67773973 67774029 67773973 ID=MS.gene70404.t1.exon5;Parent=MS.gene70404.t1
chr3.1 CDS 67773973 67774029 67773973 ID=cds.MS.gene70404.t1;Parent=MS.gene70404.t1
chr3.1 exon 67774119 67774172 67774119 ID=MS.gene70404.t1.exon6;Parent=MS.gene70404.t1
chr3.1 CDS 67774119 67774172 67774119 ID=cds.MS.gene70404.t1;Parent=MS.gene70404.t1
Gene Sequence

>MS.gene70404

ATGCTAAGGAAAGGAACGGATGACAATGAAGGTGTTGATTGGATGATCTATTGAGATACCAATATCTAATTGCATAAAAATATATGCTAAGGAAAGGAATCAATATCAATGAAGATTTTATGGAGCTTCTAATTGCTTAAAAATATATCATGTCATCATCACGTTAGGATAACAATAGCTCTTTGGATTACAATTTAGTACAGCCTGGTAGTGCAAGATTCTTTTGATTACAACTTAGTATAAGACTAATCAATACAATATGGTAGTACAAGGCTAAGACTCTTTTGATTACAATTGGAATTTCTTCCATTAATTCAATACAATTTACTTGAATGCTTCCTCTTCATAATCAATGTTGTCCTTTTTACATTGACCTGTATAGGACATAATATCAGTGTCTTGATTATTAACCAAGTAAGGCTTTTCTGCATTTTGAATCCACATCCTAATAATGTTTCTAAGTTGTTGTTCCACTAGTAGATATATTTCTTTTGAGGAATATTGAGACAGTTGTCAGGACATAATCTTTGCAACATACAAGAAACAACATTATAAAGTCTCCTGTTTGTTGACATGTAGAAAAAGGTCAAAATTTATTTGCTTCCAATTTACATAACCATTACTTATGATGCGGCCTATACATGGTACTTTTAATGGTGGTCTTAAATTGACCAACACAAGTTTCCCAACATGAAGCACTCATAATAACATCATCAAGCAATAAGTTTTAATAACCACACAAGTCAAATGCACACAGTGAATCCTATCTAGCAATCTGTTAATTTTGTTTAGACAAGAAGCAAAAACAGTTGCAAAGTGACGACACAAGATGGGTTGGTGATATGAGGGAGGAAGAAATTATGGAAATAGCTTGCTTTAATAGTTATACAGAAGAGAAAACAAAAGAAGAAAAAACCGTTTTCCACCACACGAGAAAGAAATGCTGCACGATATTTCCAACTTTTTTTCATTTTATTTTTTTAACATAAATAAATATAAAATGAGGTGTCAAGTTATTAGTGGTTGTTTGTAAAACCTTATGTGTTAGGTGCGTTTGCGTGCAAGAATTTCTCTTAGTAATCATACCCACTAATCCCTAAACTAAAGCAAATTCTACAATACTCTCACAGACCCACTCCTTGCGCATGCGCCGACGGTTTTTCCACTCCTCTCAATCCGTAAAACTGTGACAGGAAAATAACAAAACTCCTCAGAAGTGTAGTTGAAATAGTAACAAATCAGCAAAAATCAAGTAAGTTCACTCCTATATATTGGCTTATCATCCATCGCTCTATCAAGTGATTAAACTATCTTTATGATTAATTCAATTGTGATTTTAAAATTTGATTTAGAAACTGATATGGATTAGTCTAAATTTGTATTTAAAGCTTATTCTGATGTTGTTCCTATATCACTTATATTTTTAGTTGATTATCATAAGTTTCTCCCTGTTTGTTTTATTTACTTTTTTTCCTTTTTGAATTTATTGCATTAGTGGAGGAAGTATTTGTATCTTCGGATGAAGAGGAAATCAACGAAGGAAATAATAGATGTGATGGTAGTTTAGAACCAAATAGTGTTCATGAAGATGAAATACCTAAGGTTGGAACTATATTTAGCTCTAAAGAAGAACTTGAAGAGTATTACAAGAGTTATGCCCGGTCTATAGGTTTTGGAGTTACTAAACTTAGTAGCAAAAATGGAGATGATGGAAAAAAGTATTTTACTCTAGCATGTAGTCGTGGAACAAAGTATGTGAGTAAATCAAAGAAGCTTTTGAAGTCAAATCCTATAACAAAAATCCAGTGCAAGGCTAGATTGAATGCATGTATTTCTTTAGACGGAACAGTTACTATTTCAAAAATTGCTCTTGAGCATAATCATGATCTAAGCCCTAACAAAGCACGCTATTTTAGAAGTAATAAGATTTTGGATCCTCGTTTGAAAAGGAGGTTAGAACTCAATGATCAAGCTGGAATAAATGTGAGCAGAAATTTCCGATCTATAGTTGTTGAAGCGAATGGGTATGAGAATATGACATTTGGTGAAAAGGACCGTAGGAACCATATAGATAAAGTGCGGAGACTGCGACTTGGGGTTGGAGATGCTGAGGCGATTCAAAATTATTTTGTTAAAATGCAAAAGCAAAATAGTCAATTCTATTATGTAATAGACATTGATGATAAAAGTTGTTTACGGAATGTATTTTGGGCAGATGCGAGATGTAGGGCTGCATATGAATATTTTGGTGATGTCGTAACATTTGACACTACTTACTTAACAAATAAATATGACATGCCATTTGCTCCTTTTGTTGGAGTAAATCACCATGGTCAATCTGTGTTGTTGGGATGTGCTTTACTGTCAAGCGAGGATACTAAGACCTTTACTTGGCTGTTCACAACATGGTTGGAATGCATGCATGGACGTGCTCCAAATGCCATAATAATTGATCAAGACAATGCCATGAAAAATGCAATTGCAGATGTTTTTCCAAAAGCTCGCCATCGATGGTGTTTGTGGCATATAATGAAAAAGGTTCCAGAAAAGCTAGGTAGACACTCTCATTATGAGTCTATCAAAGAACTTTTGCATGATGCTGTATACGATTCTTTGAGTAAAAGTGATTTCATGGAAAAGTGGGAAAGAATGATTGAAGATTTTGAACTTCAGGATAACGAATGGTTGAAGGGGCTATTTGATGAAAGAAATCATTGGGTTCCTACATATGTGAGAGACACATTTTGGGCGGGCATGTCAACGACTCAAAGAAGTGAAAGTATGAACTCATTCTTTGATGGTTATGTAAATTCAAAGATAACATTGAAGCAATTTGTTGAACAATATGACAATGCATTGAAAGATAAAGTTGAGAAGGAAAACATGTCTGATTTTGGTTCATTTAATACGGTGATAGCTTGTGTAAGTCATTTTGGCTTTGAGTTCCAATTCCAGAAAGCATTCACCAATGCAAAATTCCAAGAATTTCAAGTGGAGGTTGCTTCTATGATTTATTGTCATGCTTGCTTTGATAGATTGGAAGGATCGAATTCTATATATTCTGTTATAGAAAGCAAGAAAAAATTTGACACAATTAAAGACATAGTGTTTGAGGTATCCTTCAATGAGAAAGACTCTGAGTTACAATGTATGTGTTGTTTGTTTCAATTCAAAGGTATTTTATGCAGACACATCCTTTGTGTGCTTAAGCTAACAGGAAAAACAGAGTCATTGCCGTCCTCTTATATTTTCTCACAGTGGAGGAAGGATATAAGGCGAAGGCATACCCTTATTAAATGTGGTTTTGATAATTTAGTTGGAAATGCTGAATTGCAAAGAGTTGATAAAGCTTGTTCTGCCTTTTACGAAGTTGCTTCTACGGTGATAAATAACGATAATGATTTGTCGAAAATGATGAATCTAATCAAGAAAATAAAAAGTGAGTTTACCTCTCAAGAAACATGCCCTGAAATTATAGAAGAAGATGGTTTAGTTCATAATCAAGTGACTAAAATTCTTGACCCTGTACCGACTCAAAGTAAAGGGCGTCCTCCTTCAAAAAGGAAGTCCTCAAAAGTTGATCAAATTGTGAATAAACTTGCAAAAAAGAGGACCCAAAAAAGAAGCCAAGGAAGTGGAAATCATCAAAGTCAACAAGAGGTAATTTAAGATACATGTACATCTAAATTAATAATTTTGAATATGTCTAATTTTCAATATTTGATGGCAGGACCTGTGTGCATCTAAATTGCAAGAGAGTGTTCAAGTAGTTGATAAAGTTGGCACACAAGAGAGCATTCAAGTAAGTAATTTTATTTATTCTCAGCTTTAGTTTTAAACAATCAATGAGAACTACATACTGATTGTCTATGTTTGTTACATGTATGTTTTTAGGGGGGACACATTAGTTTTAGGAGGAATGAACATGGTGGAGTAAATAATTTAGCTCCCTTCAATCCAAATTCAATACTTATGAGTGAAGTATATCAGGTGCAAGCATAAATCCAGTGCTCTTTAGTTTTCTGGAACATTATTATTGTGGATTCTAACAAGTATGTTTCCTGTTATTTAGGTTCCATTTTATCCTCAAGTCATGAATCATGGTGTTTCATATTTTGAATTATTACAGGTACTTGATCTTTATCGTCCTCTTATGTTTTTTTTAATTAAATATTTTGATATAAATTCATCAACTCTGTCATTTTTTTCTTTTTGAAGGCACAACATCATGTGAATGATCCATCGTCGTCATCAATAACACGTGAATCATAA
Protein sequence

>MS.gene70404.t1

MLRKGTDDNEVEEVFVSSDEEEINEGNNRCDGSLEPNSVHEDEIPKVGTIFSSKEELEEYYKSYARSIGFGVTKLSSKNGDDGKKYFTLACSRGTKYVSKSKKLLKSNPITKIQCKARLNACISLDGTVTISKIALEHNHDLSPNKARYFRSNKILDPRLKRRLELNDQAGINVSRNFRSIVVEANGYENMTFGEKDRRNHIDKVRRLRLGVGDAEAIQNYFVKMQKQNSQFYYVIDIDDKSCLRNVFWADARCRAAYEYFGDVVTFDTTYLTNKYDMPFAPFVGVNHHGQSVLLGCALLSSEDTKTFTWLFTTWLECMHGRAPNAIIIDQDNAMKNAIADVFPKARHRWCLWHIMKKVPEKLGRHSHYESIKELLHDAVYDSLSKSDFMEKWERMIEDFELQDNEWLKGLFDERNHWVPTYVRDTFWAGMSTTQRSESMNSFFDGYVNSKITLKQFVEQYDNALKDKVEKENMSDFGSFNTVIACVSHFGFEFQFQKAFTNAKFQEFQVEVASMIYCHACFDRLEGSNSIYSVIESKKKFDTIKDIVFEVSFNEKDSELQCMCCLFQFKGILCRHILCVLKLTGKTESLPSSYIFSQWRKDIRRRHTLIKCGFDNLVGNAELQRVDKACSAFYEVASTVINNDNDLSKMMNLIKKIKSEFTSQETCPEIIEEDGLVHNQVTKILDPVPTQSKGRPPSKRKSSKVDQIVNKLAKKRTQKRSQGSGNHQSQQEDLCASKLQESVQVVDKVGTQESIQGGHISFRRNEHGGVNNLAPFNPNSILMSEVYQVPFYPQVMNHGVSYFELLQAQHHVNDPSSSSITRES