Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70573.t1 | XP_013461072.1 | 93.6 | 642 | 24 | 7 | 1 | 638 | 1 | 629 | 0.00E+00 | 1162.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70573.t1 | O24606 | 62.5 | 557 | 180 | 10 | 3 | 553 | 1 | 534 | 2.6e-187 | 656.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70573.t1 | D0EXG5 | 93.6 | 642 | 24 | 7 | 1 | 638 | 1 | 629 | 0.0e+00 | 1162.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene70573.t1 | TF | EIL |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70573.t1 | MTR_3g078770 | 94.860 | 642 | 16 | 7 | 1 | 638 | 1 | 629 | 0.0 | 1244 |
| MS.gene70573.t1 | MTR_5g087790 | 68.682 | 645 | 160 | 18 | 2 | 636 | 1 | 613 | 0.0 | 836 |
| MS.gene70573.t1 | MTR_2g098470 | 63.399 | 306 | 98 | 4 | 41 | 334 | 27 | 330 | 7.26e-130 | 395 |
| MS.gene70573.t1 | MTR_3g087530 | 63.953 | 258 | 82 | 4 | 49 | 301 | 29 | 280 | 3.24e-112 | 343 |
| MS.gene70573.t1 | MTR_6g060600 | 38.370 | 503 | 264 | 9 | 26 | 520 | 17 | 481 | 3.93e-110 | 346 |
| MS.gene70573.t1 | MTR_6g460640 | 50.160 | 313 | 145 | 4 | 26 | 333 | 17 | 323 | 3.55e-107 | 338 |
| MS.gene70573.t1 | MTR_8g091370 | 60.232 | 259 | 97 | 3 | 46 | 301 | 16 | 271 | 1.54e-105 | 327 |
| MS.gene70573.t1 | MTR_3g010790 | 52.000 | 250 | 116 | 2 | 106 | 351 | 1 | 250 | 4.24e-89 | 286 |
| MS.gene70573.t1 | MTR_1g024420 | 44.660 | 103 | 55 | 1 | 48 | 148 | 6 | 108 | 1.77e-26 | 104 |
| MS.gene70573.t1 | MTR_7g095580 | 42.056 | 107 | 44 | 3 | 95 | 189 | 1 | 101 | 5.33e-19 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70573.t1 | AT3G20770 | 57.274 | 653 | 236 | 15 | 3 | 637 | 1 | 628 | 0.0 | 682 |
| MS.gene70573.t1 | AT2G27050 | 58.725 | 596 | 181 | 18 | 2 | 572 | 1 | 556 | 0.0 | 629 |
| MS.gene70573.t1 | AT1G73730 | 62.541 | 307 | 93 | 6 | 43 | 334 | 29 | 328 | 2.22e-126 | 385 |
| MS.gene70573.t1 | AT1G73730 | 62.541 | 307 | 93 | 6 | 43 | 334 | 17 | 316 | 2.48e-126 | 384 |
| MS.gene70573.t1 | AT5G21120 | 46.578 | 453 | 187 | 13 | 2 | 436 | 8 | 423 | 2.86e-119 | 365 |
| MS.gene70573.t1 | AT5G21120 | 46.578 | 453 | 187 | 13 | 2 | 436 | 1 | 416 | 3.66e-119 | 365 |
| MS.gene70573.t1 | AT5G21120 | 46.578 | 453 | 187 | 13 | 2 | 436 | 1 | 416 | 3.66e-119 | 365 |
| MS.gene70573.t1 | AT5G65100 | 44.208 | 423 | 191 | 11 | 47 | 432 | 33 | 447 | 2.86e-105 | 330 |
| MS.gene70573.t1 | AT5G10120 | 57.634 | 262 | 108 | 1 | 43 | 301 | 14 | 275 | 4.29e-103 | 322 |
Find 209 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTACAAGCTTGCGAATTT+TGG | 0.116142 | 3.1:-64592980 | None:intergenic |
| GGCTCTTCTTCATCTGATTT+TGG | 0.161207 | 3.1:+64593480 | MS.gene70573:CDS |
| ATCTTTCGGTAAACCGATTT+GGG | 0.200055 | 3.1:-64592860 | None:intergenic |
| AATAATTTCCATTTAATGTT+TGG | 0.231056 | 3.1:+64593960 | MS.gene70573:CDS |
| GTGGGGACCCAAACATTAAA+TGG | 0.259726 | 3.1:-64593968 | None:intergenic |
| CCAAGCTGACAATGCAATTC+CGG | 0.279173 | 3.1:+64592654 | MS.gene70573:CDS |
| GATCTTTCGGTAAACCGATT+TGG | 0.301097 | 3.1:-64592861 | None:intergenic |
| CCGATGTGAGCTTGGCTATA+AGG | 0.303939 | 3.1:-64593405 | None:intergenic |
| AATTCAAAGCTTTGAACCTT+TGG | 0.308642 | 3.1:-64593890 | None:intergenic |
| AATGGCTCAGCCGGTTAATA+TGG | 0.309330 | 3.1:+64593572 | MS.gene70573:CDS |
| ATAATTTCCATTTAATGTTT+GGG | 0.318681 | 3.1:+64593961 | MS.gene70573:CDS |
| GGTCACAGGCTTTCCTTTCT+CGG | 0.320948 | 3.1:-64592551 | None:intergenic |
| CATGTGATGATGATTGTTAT+TGG | 0.322259 | 3.1:-64593841 | None:intergenic |
| ACCGGCTGAGCCATTGGTTT+CGG | 0.323642 | 3.1:-64593564 | None:intergenic |
| GGTGCTTCTCAAGCGATTAA+AGG | 0.326570 | 3.1:+64592366 | MS.gene70573:CDS |
| GTCAGCTTGGTACTTGGATA+TGG | 0.327342 | 3.1:-64592641 | None:intergenic |
| CGTTCCTCCACATCAAAATT+CGG | 0.328270 | 3.1:-64593186 | None:intergenic |
| AGGCTCAAGGGTTTGTTTAC+GGG | 0.333360 | 3.1:+64592521 | MS.gene70573:CDS |
| CCAAAATTCGCAAGCTTGTA+AGG | 0.334057 | 3.1:+64592980 | MS.gene70573:CDS |
| CAGATATTTCTTCATCAGTA+TGG | 0.343697 | 3.1:+64594066 | MS.gene70573:CDS |
| AAGGCTCAAGGGTTTGTTTA+CGG | 0.347915 | 3.1:+64592520 | MS.gene70573:CDS |
| GGCGGAGGACCTTGATCTTT+CGG | 0.355023 | 3.1:-64592874 | None:intergenic |
| CCTCCTCCATGGTGGCCTAC+AGG | 0.364645 | 3.1:+64592820 | MS.gene70573:CDS |
| GATGAAGAAGAGCCTCTATA+TGG | 0.374646 | 3.1:-64593471 | None:intergenic |
| AAAGGTCCAGCTGCGACAAA+TGG | 0.377442 | 3.1:-64593114 | None:intergenic |
| TTGATTGACGATTGCAAGCC+AGG | 0.380797 | 3.1:-64593049 | None:intergenic |
| GTCACAGGCTTTCCTTTCTC+GGG | 0.386577 | 3.1:-64592550 | None:intergenic |
| TTCTTCATCAATCCAACATT+GGG | 0.399620 | 3.1:+64593223 | MS.gene70573:CDS |
| GAGGAGGATGTGGAGGGATA+AGG | 0.401050 | 3.1:+64592345 | MS.gene70573:CDS |
| TGCATTGTCAGCTTGGTACT+TGG | 0.401725 | 3.1:-64592647 | None:intergenic |
| CCACCTTCCATCGATATAAC+TGG | 0.402818 | 3.1:+64593597 | MS.gene70573:CDS |
| CATATCTCCCTTGAACTCAT+AGG | 0.404451 | 3.1:-64594006 | None:intergenic |
| AGATCATGAGGTTTCTTGTA+AGG | 0.405253 | 3.1:-64592895 | None:intergenic |
| ATTGCGAAAGTCTGCTGAAA+TGG | 0.405530 | 3.1:-64593276 | None:intergenic |
| TTTCCTCCTTGCCTGTTCCT+GGG | 0.410461 | 3.1:-64592437 | None:intergenic |
| CAAGCTGACAATGCAATTCC+GGG | 0.413671 | 3.1:+64592655 | MS.gene70573:CDS |
| AAGGTCCAGCTGCGACAAAT+GGG | 0.416033 | 3.1:-64593113 | None:intergenic |
| TTTGTCGCAGCTGGACCTTT+CGG | 0.419285 | 3.1:+64593117 | MS.gene70573:CDS |
| TTGCCTCTGCTTGGCCGCAT+CGG | 0.422356 | 3.1:-64592413 | None:intergenic |
| TCGCCTCAGGTTCAGTTAGC+CGG | 0.423673 | 3.1:-64592273 | None:intergenic |
| GATTGATGAAGAAGATTCTC+AGG | 0.425025 | 3.1:-64593213 | None:intergenic |
| CATACTGATGAAGAAATATC+TGG | 0.429090 | 3.1:-64594065 | None:intergenic |
| TCAATCCAACATTGGGATGA+TGG | 0.429901 | 3.1:+64593230 | MS.gene70573:CDS |
| CCGGAATTGCATTGTCAGCT+TGG | 0.430474 | 3.1:-64592654 | None:intergenic |
| GCCGCATCGGATCCTTCCTT+CGG | 0.430698 | 3.1:-64592400 | None:intergenic |
| GATCATGAGATGGCTCTATC+TGG | 0.431769 | 3.1:+64592196 | MS.gene70573:CDS |
| GGCAACATGAATTTAACTTC+TGG | 0.433244 | 3.1:+64593690 | MS.gene70573:CDS |
| CCCTCAGAGGCGGTTTCCAT+TGG | 0.434105 | 3.1:+64592786 | MS.gene70573:CDS |
| ACCTCATTAGCATGAAAACT+TGG | 0.436185 | 3.1:-64593507 | None:intergenic |
| TTCCTGGGATTGCCTCTGCT+TGG | 0.439634 | 3.1:-64592422 | None:intergenic |
| GCAGCTCTTGCAAGGTGTGA+GGG | 0.439936 | 3.1:-64592711 | None:intergenic |
| CCGCGAATGGTGGAAGGATA+AGG | 0.449952 | 3.1:+64592591 | MS.gene70573:CDS |
| GCAGAGGCAATCCCAGGAAC+AGG | 0.451574 | 3.1:+64592426 | MS.gene70573:CDS |
| CTCCTCCATGGTGGCCTACA+GGG | 0.453443 | 3.1:+64592821 | MS.gene70573:CDS |
| CCTTATCCTTCCACCATTCG+CGG | 0.453482 | 3.1:-64592591 | None:intergenic |
| GTGAGGAAGCGGAAGATCTC+TGG | 0.455579 | 3.1:+64593330 | MS.gene70573:CDS |
| TACGGGATCATTCCCGAGAA+AGG | 0.459725 | 3.1:+64592538 | MS.gene70573:CDS |
| GAAGGTGGAACCATATTAAC+CGG | 0.463028 | 3.1:-64593582 | None:intergenic |
| CTTCTTCATCAATCCAACAT+TGG | 0.463424 | 3.1:+64593222 | MS.gene70573:CDS |
| AGCAGCATGAGAATTACTTC+AGG | 0.465101 | 3.1:+64593769 | MS.gene70573:CDS |
| TCAGCAGACTTTCGCAATGA+AGG | 0.468808 | 3.1:+64593281 | MS.gene70573:CDS |
| ATGATTGTTATTGGACATGT+TGG | 0.474263 | 3.1:-64593832 | None:intergenic |
| TGCAGCTCTTGCAAGGTGTG+AGG | 0.478278 | 3.1:-64592712 | None:intergenic |
| GAGAAAGGAAAGCCTGTGAC+CGG | 0.478282 | 3.1:+64592553 | MS.gene70573:CDS |
| ATATTAACCGGCTGAGCCAT+TGG | 0.478420 | 3.1:-64593570 | None:intergenic |
| GTATCCCTAGAAGCCCTGTC+TGG | 0.478900 | 3.1:-64593432 | None:intergenic |
| GTCTATGATTCAGATATTCA+AGG | 0.479340 | 3.1:+64593669 | MS.gene70573:CDS |
| TCACACCTTGCAAGAGCTGC+AGG | 0.479872 | 3.1:+64592714 | MS.gene70573:CDS |
| CGCCTCAGGTTCAGTTAGCC+GGG | 0.481589 | 3.1:-64592272 | None:intergenic |
| GATGGCTCTATCTGGTGATC+TGG | 0.482695 | 3.1:+64592204 | MS.gene70573:CDS |
| TCTTGCAAGGTGTGAGGGGT+TGG | 0.482958 | 3.1:-64592706 | None:intergenic |
| CACATGTTTGCAAGAGATGA+AGG | 0.486109 | 3.1:+64593858 | MS.gene70573:CDS |
| GCTCCCCAACCCCAAGTTGA+GGG | 0.486678 | 3.1:+64592238 | MS.gene70573:CDS |
| TGCTCCCCAACCCCAAGTTG+AGG | 0.487998 | 3.1:+64592237 | MS.gene70573:CDS |
| TCCTTCCCTGTAGGCCACCA+TGG | 0.488917 | 3.1:-64592826 | None:intergenic |
| CTCTGGTGAATTTAACATGA+TGG | 0.489439 | 3.1:+64593347 | MS.gene70573:CDS |
| GAGAATTACTTCAGGGGTCA+AGG | 0.490089 | 3.1:+64593777 | MS.gene70573:CDS |
| CATGCCTTCTTCAGATCATG+AGG | 0.490321 | 3.1:-64592907 | None:intergenic |
| GGCCAAGCAGAGGCAATCCC+AGG | 0.494536 | 3.1:+64592420 | MS.gene70573:CDS |
| TTTCTGAAGATGGTGAGAAA+AGG | 0.494881 | 3.1:+64593628 | MS.gene70573:CDS |
| CCAATGGAAACCGCCTCTGA+GGG | 0.495394 | 3.1:-64592786 | None:intergenic |
| CCGAGCTTGAGAGGAGGATG+TGG | 0.496132 | 3.1:+64592335 | MS.gene70573:CDS |
| AATGGTGGAAGGATAAGGTT+AGG | 0.496339 | 3.1:+64592596 | MS.gene70573:CDS |
| GCAATTCCGGGGAAGAATGA+TGG | 0.501691 | 3.1:+64592667 | MS.gene70573:CDS |
| TTTGACATCCTATGAGTTCA+AGG | 0.502925 | 3.1:+64593998 | MS.gene70573:CDS |
| CGGATAATCTCCGCGAATGG+TGG | 0.504192 | 3.1:+64592581 | MS.gene70573:CDS |
| ACCGAAACCAATGGCTCAGC+CGG | 0.505945 | 3.1:+64593563 | MS.gene70573:CDS |
| TCTTCGTCAACCATCGCCTC+AGG | 0.506692 | 3.1:-64592286 | None:intergenic |
| GGACTTGGAGTTTCTGAAGA+TGG | 0.507451 | 3.1:+64593618 | MS.gene70573:CDS |
| CTGAAGAAGGCATGGAAGGT+TGG | 0.507865 | 3.1:+64592916 | MS.gene70573:CDS |
| TTATCCGATGCCCCGGTCAC+AGG | 0.510724 | 3.1:-64592565 | None:intergenic |
| TCTCTCCATCATCCCAATGT+TGG | 0.511441 | 3.1:-64593235 | None:intergenic |
| AGAAGGGTGTTCCTCCTCCA+TGG | 0.516637 | 3.1:+64592809 | MS.gene70573:CDS |
| ATGGAGGTTTGCAAGGCTCA+AGG | 0.517295 | 3.1:+64592508 | MS.gene70573:CDS |
| GGAAGAGGCTGTGACCAACT+TGG | 0.519473 | 3.1:+64593302 | MS.gene70573:CDS |
| AGGATAAAGCTCCCGCGCTA+AGG | 0.520455 | 3.1:-64593079 | None:intergenic |
| GAGCTGCAGGACACAACCTT+GGG | 0.520799 | 3.1:+64592727 | MS.gene70573:CDS |
| ACTTGGATTTCGTGAGGAAG+CGG | 0.521923 | 3.1:+64593319 | MS.gene70573:CDS |
| CAATTGAGTTGTCCATATAG+AGG | 0.522292 | 3.1:+64593459 | MS.gene70573:CDS |
| AAAGCCTGTGACCGGGGCAT+CGG | 0.525234 | 3.1:+64592561 | MS.gene70573:CDS |
| GGACCTTTCGGCATCAATGA+AGG | 0.525234 | 3.1:+64593129 | MS.gene70573:CDS |
| AGAAAGGAAAGCCTGTGACC+GGG | 0.526532 | 3.1:+64592554 | MS.gene70573:CDS |
| TGTGTCCTGCAGCTCTTGCA+AGG | 0.529578 | 3.1:-64592719 | None:intergenic |
| TGATTGTGATTGTTCTCAAA+GGG | 0.531892 | 3.1:-64593915 | None:intergenic |
| ATCGGTTTACCGAAAGATCA+AGG | 0.532949 | 3.1:+64592865 | MS.gene70573:CDS |
| GAGGCGGTTTCCATTGGAGA+AGG | 0.533081 | 3.1:+64592792 | MS.gene70573:CDS |
| CTGGAAAACCGATGTGAGCT+TGG | 0.533885 | 3.1:-64593413 | None:intergenic |
| GAAGAGTGGTGGCCCCAAAT+CGG | 0.536945 | 3.1:+64592847 | MS.gene70573:CDS |
| CGGCTAAGGAAAGTGCAACC+TGG | 0.537233 | 3.1:+64593031 | MS.gene70573:CDS |
| TCAAGATAAAATGACGGCTA+AGG | 0.537615 | 3.1:+64593017 | MS.gene70573:CDS |
| TGCTGAATGCTGCTAGCTTG+CGG | 0.538137 | 3.1:-64593747 | None:intergenic |
| TGAGGTTTCTTGTAAGGCGG+AGG | 0.540347 | 3.1:-64592889 | None:intergenic |
| GAAGTACATGCTGAAAATGA+TGG | 0.543075 | 3.1:+64592489 | MS.gene70573:CDS |
| GTGTGAGGGGTTGGACCGAT+CGG | 0.543206 | 3.1:-64592697 | None:intergenic |
| GAAAGGAAAGCCTGTGACCG+GGG | 0.544653 | 3.1:+64592555 | MS.gene70573:CDS |
| GACTTTCGCAATGAAGGAAG+AGG | 0.546905 | 3.1:+64593287 | MS.gene70573:CDS |
| TTGCCTCCATCATTCTTCCC+CGG | 0.547718 | 3.1:-64592673 | None:intergenic |
| CTCATGATCTGAAGAAGGCA+TGG | 0.547916 | 3.1:+64592908 | MS.gene70573:CDS |
| TTGATGTTGCCGAGCTTGAG+AGG | 0.548157 | 3.1:+64592326 | MS.gene70573:CDS |
| GCAATGAGTATGATGTCGAT+GGG | 0.548446 | 3.1:+64593151 | MS.gene70573:CDS |
| GAAACCTCATGATCTGAAGA+AGG | 0.550430 | 3.1:+64592903 | MS.gene70573:CDS |
| TGGTACTTGGATATGGCAGC+AGG | 0.551180 | 3.1:-64592634 | None:intergenic |
| AGAGCTGCAGGACACAACCT+TGG | 0.551353 | 3.1:+64592726 | MS.gene70573:CDS |
| GCAGCATGAGAATTACTTCA+GGG | 0.554925 | 3.1:+64593770 | MS.gene70573:CDS |
| TAATCTCCGCGAATGGTGGA+AGG | 0.556888 | 3.1:+64592585 | MS.gene70573:CDS |
| CACCACTCTTCCTTCCCTGT+AGG | 0.558000 | 3.1:-64592835 | None:intergenic |
| GTGATTGTGATTGTTCTCAA+AGG | 0.561089 | 3.1:-64593916 | None:intergenic |
| AGCTTGAGAGGAGGATGTGG+AGG | 0.561978 | 3.1:+64592338 | MS.gene70573:CDS |
| TGCAGATAAGAGAGAACCCA+AGG | 0.562468 | 3.1:-64592743 | None:intergenic |
| TCCAAGTCCAGTTATATCGA+TGG | 0.562663 | 3.1:-64593604 | None:intergenic |
| CCTGTAGGCCACCATGGAGG+AGG | 0.564770 | 3.1:-64592820 | None:intergenic |
| GGCAATCCCAGGAACAGGCA+AGG | 0.565695 | 3.1:+64592431 | MS.gene70573:CDS |
| TCCAATGGAAACCGCCTCTG+AGG | 0.567003 | 3.1:-64592787 | None:intergenic |
| CAGCTCTTGCAAGGTGTGAG+GGG | 0.568677 | 3.1:-64592710 | None:intergenic |
| TGGAGGTTTGCAAGGCTCAA+GGG | 0.571141 | 3.1:+64592509 | MS.gene70573:CDS |
| TGATCTGAAGAAGGCATGGA+AGG | 0.572466 | 3.1:+64592912 | MS.gene70573:CDS |
| TATGCATGGAGTAGGCATCA+TGG | 0.573987 | 3.1:+64594025 | MS.gene70573:CDS |
| ATGAAGGTCAATTTGACCAA+AGG | 0.575029 | 3.1:+64593874 | MS.gene70573:CDS |
| GGCCTACAGGGAAGGAAGAG+TGG | 0.575468 | 3.1:+64592833 | MS.gene70573:CDS |
| TCCATCGATATAACTGGACT+TGG | 0.575840 | 3.1:+64593603 | MS.gene70573:CDS |
| GGTCCAGCTGCGACAAATGG+GGG | 0.576693 | 3.1:-64593111 | None:intergenic |
| AAGGGAGATATGCATGGAGT+AGG | 0.577953 | 3.1:+64594017 | MS.gene70573:CDS |
| TTACTTCAGGGGTCAAGGAA+TGG | 0.577986 | 3.1:+64593782 | MS.gene70573:CDS |
| GATCCGATGCGGCCAAGCAG+AGG | 0.578212 | 3.1:+64592410 | MS.gene70573:CDS |
| GGAGGAACACCCTTCTCCAA+TGG | 0.579400 | 3.1:-64592802 | None:intergenic |
| AGGTCCAGCTGCGACAAATG+GGG | 0.579864 | 3.1:-64593112 | None:intergenic |
| GCTAACTGAACCTGAGGCGA+TGG | 0.580269 | 3.1:+64592276 | MS.gene70573:CDS |
| AGGATGTCAAATCACAATGT+GGG | 0.580845 | 3.1:-64593986 | None:intergenic |
| CTCCCCAACCCCAAGTTGAG+GGG | 0.581721 | 3.1:+64592239 | MS.gene70573:CDS |
| CTTCCTCACGAAATCCAAGT+TGG | 0.583208 | 3.1:-64593316 | None:intergenic |
| AATGGAAACCGCCTCTGAGG+GGG | 0.586396 | 3.1:-64592784 | None:intergenic |
| GAGTTCAAGGGAGATATGCA+TGG | 0.587678 | 3.1:+64594011 | MS.gene70573:CDS |
| TCAAGAGGAGGCCTTAGCGC+GGG | 0.589414 | 3.1:+64593068 | MS.gene70573:CDS |
| TCCATGGTGGCCTACAGGGA+AGG | 0.589968 | 3.1:+64592825 | MS.gene70573:CDS |
| TTGACATCCTATGAGTTCAA+GGG | 0.590024 | 3.1:+64593999 | MS.gene70573:CDS |
| GAAAATGATGGAGGTTTGCA+AGG | 0.591397 | 3.1:+64592501 | MS.gene70573:CDS |
| AAGATGTCAAGGGCTCAAGA+TGG | 0.596334 | 3.1:+64592460 | MS.gene70573:CDS |
| GGTCAAGGAATGGTGATGGA+AGG | 0.597963 | 3.1:+64593792 | MS.gene70573:CDS |
| CAGGGGTCAAGGAATGGTGA+TGG | 0.599899 | 3.1:+64593788 | MS.gene70573:CDS |
| TTGCCTTCATTGATGCCGAA+AGG | 0.600278 | 3.1:-64593132 | None:intergenic |
| GAAGATGGTGAGAAAAGGAT+TGG | 0.601828 | 3.1:+64593633 | MS.gene70573:CDS |
| GAGCAAGTCAAACCGAAGGA+AGG | 0.602432 | 3.1:+64592388 | MS.gene70573:CDS |
| AAGGTTAGGTTTGACCGCAA+CGG | 0.602662 | 3.1:+64592610 | MS.gene70573:CDS |
| AATGACTGAGGATATATGAC+TGG | 0.604420 | 3.1:-64593534 | None:intergenic |
| CCAGTTATATCGATGGAAGG+TGG | 0.610149 | 3.1:-64593597 | None:intergenic |
| TCCCCAACCCCAAGTTGAGG+GGG | 0.613156 | 3.1:+64592240 | MS.gene70573:CDS |
| CGCCCGGCTAACTGAACCTG+AGG | 0.614118 | 3.1:+64592270 | MS.gene70573:CDS |
| CCACATCCTCCTCTCAAGCT+CGG | 0.615219 | 3.1:-64592335 | None:intergenic |
| GGCAATGAGTATGATGTCGA+TGG | 0.618237 | 3.1:+64593150 | MS.gene70573:CDS |
| AGGCGGTTTCCATTGGAGAA+GGG | 0.619284 | 3.1:+64592793 | MS.gene70573:CDS |
| CATCGGATAATCTCCGCGAA+TGG | 0.620613 | 3.1:+64592578 | MS.gene70573:CDS |
| TCTTTCGGTAAACCGATTTG+GGG | 0.621358 | 3.1:-64592859 | None:intergenic |
| GCGGAGATTATCCGATGCCC+CGG | 0.628966 | 3.1:-64592572 | None:intergenic |
| TAGGATGTCAAATCACAATG+TGG | 0.629786 | 3.1:-64593987 | None:intergenic |
| TCATGAGGTTTCTTGTAAGG+CGG | 0.630329 | 3.1:-64592892 | None:intergenic |
| GATGATGTTTGATCATGAGA+TGG | 0.631968 | 3.1:+64592186 | MS.gene70573:CDS |
| AATGATGGAGGCAATCCGAT+CGG | 0.634526 | 3.1:+64592682 | MS.gene70573:CDS |
| GCTTGCAATCGTCAATCAAG+AGG | 0.634856 | 3.1:+64593053 | MS.gene70573:CDS |
| ATCAAGAGGAGGCCTTAGCG+CGG | 0.637665 | 3.1:+64593067 | MS.gene70573:CDS |
| GCTTGAGAGGAGGATGTGGA+GGG | 0.637705 | 3.1:+64592339 | MS.gene70573:CDS |
| TGACCAACTTGGATTTCGTG+AGG | 0.639847 | 3.1:+64593313 | MS.gene70573:CDS |
| TGCAATCGTCAATCAAGAGG+AGG | 0.640235 | 3.1:+64593056 | MS.gene70573:CDS |
| CCTTATAGCCAAGCTCACAT+CGG | 0.641231 | 3.1:+64593405 | MS.gene70573:CDS |
| ATTCGTTCAACCGAAACCAA+TGG | 0.641894 | 3.1:+64593554 | MS.gene70573:CDS |
| AGTCCAGTTATATCGATGGA+AGG | 0.642356 | 3.1:-64593600 | None:intergenic |
| ATGCCTTCAAGATAAAATGA+CGG | 0.643938 | 3.1:+64593011 | MS.gene70573:CDS |
| GGATGTCAAATCACAATGTG+GGG | 0.645049 | 3.1:-64593985 | None:intergenic |
| AAAGGAGCAAGTCAAACCGA+AGG | 0.648111 | 3.1:+64592384 | MS.gene70573:CDS |
| GATGGTGAGAAAAGGATTGG+TGG | 0.649012 | 3.1:+64593636 | MS.gene70573:CDS |
| ATATGGCAGCAGGACCGTTG+CGG | 0.650469 | 3.1:-64592624 | None:intergenic |
| TATAAGGACATGTTGAGTGT+TGG | 0.651109 | 3.1:-64593389 | None:intergenic |
| AGGGTGTTCCTCCTCCATGG+TGG | 0.653236 | 3.1:+64592812 | MS.gene70573:CDS |
| TTCGGTTGAACGAATGACTG+AGG | 0.658942 | 3.1:-64593546 | None:intergenic |
| CAATGGAAACCGCCTCTGAG+GGG | 0.659298 | 3.1:-64592785 | None:intergenic |
| GTCCAGCTGCGACAAATGGG+GGG | 0.662952 | 3.1:-64593110 | None:intergenic |
| CTACAGGGAAGGAAGAGTGG+TGG | 0.665816 | 3.1:+64592836 | MS.gene70573:CDS |
| CAATGAGTATGATGTCGATG+GGG | 0.670997 | 3.1:+64593152 | MS.gene70573:CDS |
| AATGAGTATGATGTCGATGG+GGG | 0.671000 | 3.1:+64593153 | MS.gene70573:CDS |
| AATCCCAGGAACAGGCAAGG+AGG | 0.672658 | 3.1:+64592434 | MS.gene70573:CDS |
| TTCCCTGTAGGCCACCATGG+AGG | 0.673523 | 3.1:-64592823 | None:intergenic |
| ATGTTGCCGAGCTTGAGAGG+AGG | 0.673867 | 3.1:+64592329 | MS.gene70573:CDS |
| ATTCCGGGGAAGAATGATGG+AGG | 0.679869 | 3.1:+64592670 | MS.gene70573:CDS |
| AAGCTGACAATGCAATTCCG+GGG | 0.692590 | 3.1:+64592656 | MS.gene70573:CDS |
| CTGAATCATAGACAGTCATG+AGG | 0.695799 | 3.1:-64593659 | None:intergenic |
| CAGCATGAGAATTACTTCAG+GGG | 0.700026 | 3.1:+64593771 | MS.gene70573:CDS |
| CTCAGGTTCAGTTAGCCGGG+CGG | 0.704152 | 3.1:-64592269 | None:intergenic |
| TGGCAGCCACTTAACCGCAG+CGG | 0.706818 | 3.1:+64593710 | MS.gene70573:CDS |
| ACCGAAGGAAGGATCCGATG+CGG | 0.718950 | 3.1:+64592399 | MS.gene70573:CDS |
| GTACATGCTGAAAATGATGG+AGG | 0.724912 | 3.1:+64592492 | MS.gene70573:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATTTCCATTTAATGTT+TGG | + | chr3.1:64593960-64593979 | MS.gene70573:CDS | 15.0% |
| !! | ATAATTTCCATTTAATGTTT+GGG | + | chr3.1:64593961-64593980 | MS.gene70573:CDS | 15.0% |
| ATGCCTTCAAGATAAAATGA+CGG | + | chr3.1:64593011-64593030 | MS.gene70573:CDS | 30.0% | |
| CAGATATTTCTTCATCAGTA+TGG | + | chr3.1:64594066-64594085 | MS.gene70573:CDS | 30.0% | |
| CATACTGATGAAGAAATATC+TGG | - | chr3.1:64594068-64594087 | None:intergenic | 30.0% | |
| GTCTATGATTCAGATATTCA+AGG | + | chr3.1:64593669-64593688 | MS.gene70573:CDS | 30.0% | |
| TGATTGTGATTGTTCTCAAA+GGG | - | chr3.1:64593918-64593937 | None:intergenic | 30.0% | |
| TTCTTCATCAATCCAACATT+GGG | + | chr3.1:64593223-64593242 | MS.gene70573:CDS | 30.0% | |
| ! | ATGATTGTTATTGGACATGT+TGG | - | chr3.1:64593835-64593854 | None:intergenic | 30.0% |
| ! | CATGTGATGATGATTGTTAT+TGG | - | chr3.1:64593844-64593863 | None:intergenic | 30.0% |
| ! | TGTTGGCAAGTGAAAATTTT+AGG | - | chr3.1:64593375-64593394 | None:intergenic | 30.0% |
| !! | AATTCAAAGCTTTGAACCTT+TGG | - | chr3.1:64593893-64593912 | None:intergenic | 30.0% |
| !!! | CATTTTATCTTGAAGGCATT+TGG | - | chr3.1:64593010-64593029 | None:intergenic | 30.0% |
| AAGGAGGAAAAAGATGTCAA+GGG | + | chr3.1:64592450-64592469 | MS.gene70573:CDS | 35.0% | |
| AATGACTGAGGATATATGAC+TGG | - | chr3.1:64593537-64593556 | None:intergenic | 35.0% | |
| ACCTCATTAGCATGAAAACT+TGG | - | chr3.1:64593510-64593529 | None:intergenic | 35.0% | |
| AGATCATGAGGTTTCTTGTA+AGG | - | chr3.1:64592898-64592917 | None:intergenic | 35.0% | |
| AGGATGTCAAATCACAATGT+GGG | - | chr3.1:64593989-64594008 | None:intergenic | 35.0% | |
| ATGAAGGTCAATTTGACCAA+AGG | + | chr3.1:64593874-64593893 | MS.gene70573:CDS | 35.0% | |
| CTCTGGTGAATTTAACATGA+TGG | + | chr3.1:64593347-64593366 | MS.gene70573:CDS | 35.0% | |
| CTTCTTCATCAATCCAACAT+TGG | + | chr3.1:64593222-64593241 | MS.gene70573:CDS | 35.0% | |
| GAAGTACATGCTGAAAATGA+TGG | + | chr3.1:64592489-64592508 | MS.gene70573:CDS | 35.0% | |
| GATGATGTTTGATCATGAGA+TGG | + | chr3.1:64592186-64592205 | MS.gene70573:CDS | 35.0% | |
| GATTGATGAAGAAGATTCTC+AGG | - | chr3.1:64593216-64593235 | None:intergenic | 35.0% | |
| GTGATTGTGATTGTTCTCAA+AGG | - | chr3.1:64593919-64593938 | None:intergenic | 35.0% | |
| TAGGATGTCAAATCACAATG+TGG | - | chr3.1:64593990-64594009 | None:intergenic | 35.0% | |
| TATAAGGACATGTTGAGTGT+TGG | - | chr3.1:64593392-64593411 | None:intergenic | 35.0% | |
| TCAAGATAAAATGACGGCTA+AGG | + | chr3.1:64593017-64593036 | MS.gene70573:CDS | 35.0% | |
| TTGACATCCTATGAGTTCAA+GGG | + | chr3.1:64593999-64594018 | MS.gene70573:CDS | 35.0% | |
| TTTGACATCCTATGAGTTCA+AGG | + | chr3.1:64593998-64594017 | MS.gene70573:CDS | 35.0% | |
| ! | ATCTTTCGGTAAACCGATTT+GGG | - | chr3.1:64592863-64592882 | None:intergenic | 35.0% |
| ! | CAATTGAGTTGTCCATATAG+AGG | + | chr3.1:64593459-64593478 | MS.gene70573:CDS | 35.0% |
| ! | GGCAACATGAATTTAACTTC+TGG | + | chr3.1:64593690-64593709 | MS.gene70573:CDS | 35.0% |
| ! | TCCAAGTTTTCATGCTAATG+AGG | + | chr3.1:64593506-64593525 | MS.gene70573:CDS | 35.0% |
| ! | TCTTCTTCATCTGATTTTGG+TGG | + | chr3.1:64593483-64593502 | MS.gene70573:CDS | 35.0% |
| ! | TTTCTGAAGATGGTGAGAAA+AGG | + | chr3.1:64593628-64593647 | MS.gene70573:CDS | 35.0% |
| !! | TAGCCGTCATTTTATCTTGA+AGG | - | chr3.1:64593017-64593036 | None:intergenic | 35.0% |
| AATGAGTATGATGTCGATGG+GGG | + | chr3.1:64593153-64593172 | MS.gene70573:CDS | 40.0% | |
| ACAAATGGGGGGATATAATC+AGG | - | chr3.1:64593102-64593121 | None:intergenic | 40.0% | |
| AGCAGCATGAGAATTACTTC+AGG | + | chr3.1:64593769-64593788 | MS.gene70573:CDS | 40.0% | |
| AGTCCAGTTATATCGATGGA+AGG | - | chr3.1:64593603-64593622 | None:intergenic | 40.0% | |
| ATTCGTTCAACCGAAACCAA+TGG | + | chr3.1:64593554-64593573 | MS.gene70573:CDS | 40.0% | |
| ATTGCGAAAGTCTGCTGAAA+TGG | - | chr3.1:64593279-64593298 | None:intergenic | 40.0% | |
| CAAGGAGGAAAAAGATGTCA+AGG | + | chr3.1:64592449-64592468 | MS.gene70573:CDS | 40.0% | |
| CAATGAGTATGATGTCGATG+GGG | + | chr3.1:64593152-64593171 | MS.gene70573:CDS | 40.0% | |
| CACATGTTTGCAAGAGATGA+AGG | + | chr3.1:64593858-64593877 | MS.gene70573:CDS | 40.0% | |
| CAGCATGAGAATTACTTCAG+GGG | + | chr3.1:64593771-64593790 | MS.gene70573:CDS | 40.0% | |
| CATATCTCCCTTGAACTCAT+AGG | - | chr3.1:64594009-64594028 | None:intergenic | 40.0% | |
| CCAAAATTCGCAAGCTTGTA+AGG | + | chr3.1:64592980-64592999 | MS.gene70573:CDS | 40.0% | |
| CGTTCCTCCACATCAAAATT+CGG | - | chr3.1:64593189-64593208 | None:intergenic | 40.0% | |
| CTGAATCATAGACAGTCATG+AGG | - | chr3.1:64593662-64593681 | None:intergenic | 40.0% | |
| GAAACCTCATGATCTGAAGA+AGG | + | chr3.1:64592903-64592922 | MS.gene70573:CDS | 40.0% | |
| GAAGATGGTGAGAAAAGGAT+TGG | + | chr3.1:64593633-64593652 | MS.gene70573:CDS | 40.0% | |
| GAAGGTGGAACCATATTAAC+CGG | - | chr3.1:64593585-64593604 | None:intergenic | 40.0% | |
| GATCTTTCGGTAAACCGATT+TGG | - | chr3.1:64592864-64592883 | None:intergenic | 40.0% | |
| GATGAAGAAGAGCCTCTATA+TGG | - | chr3.1:64593474-64593493 | None:intergenic | 40.0% | |
| GCAATGAGTATGATGTCGAT+GGG | + | chr3.1:64593151-64593170 | MS.gene70573:CDS | 40.0% | |
| GCAGCATGAGAATTACTTCA+GGG | + | chr3.1:64593770-64593789 | MS.gene70573:CDS | 40.0% | |
| GGATGTCAAATCACAATGTG+GGG | - | chr3.1:64593988-64594007 | None:intergenic | 40.0% | |
| GTACATGCTGAAAATGATGG+AGG | + | chr3.1:64592492-64592511 | MS.gene70573:CDS | 40.0% | |
| TCAATCCAACATTGGGATGA+TGG | + | chr3.1:64593230-64593249 | MS.gene70573:CDS | 40.0% | |
| TCATGAGGTTTCTTGTAAGG+CGG | - | chr3.1:64592895-64592914 | None:intergenic | 40.0% | |
| TCCAAGTCCAGTTATATCGA+TGG | - | chr3.1:64593607-64593626 | None:intergenic | 40.0% | |
| TCCATCGATATAACTGGACT+TGG | + | chr3.1:64593603-64593622 | MS.gene70573:CDS | 40.0% | |
| ! | AAGGCTCAAGGGTTTGTTTA+CGG | + | chr3.1:64592520-64592539 | MS.gene70573:CDS | 40.0% |
| ! | AATGGTGGAAGGATAAGGTT+AGG | + | chr3.1:64592596-64592615 | MS.gene70573:CDS | 40.0% |
| ! | ATCGGTTTACCGAAAGATCA+AGG | + | chr3.1:64592865-64592884 | MS.gene70573:CDS | 40.0% |
| ! | CCTTACAAGCTTGCGAATTT+TGG | - | chr3.1:64592983-64593002 | None:intergenic | 40.0% |
| ! | GAAAATGATGGAGGTTTGCA+AGG | + | chr3.1:64592501-64592520 | MS.gene70573:CDS | 40.0% |
| ! | GGCTCTTCTTCATCTGATTT+TGG | + | chr3.1:64593480-64593499 | MS.gene70573:CDS | 40.0% |
| ! | TAAGATGTGATTTTCCGCTG+CGG | - | chr3.1:64593727-64593746 | None:intergenic | 40.0% |
| !! | CGAATTTTGATGTGGAGGAA+CGG | + | chr3.1:64593187-64593206 | MS.gene70573:CDS | 40.0% |
| !! | CTTGCGAATTTTGGCAATGT+CGG | - | chr3.1:64592974-64592993 | None:intergenic | 40.0% |
| !! | TCTTTCGGTAAACCGATTTG+GGG | - | chr3.1:64592862-64592881 | None:intergenic | 40.0% |
| !! | TTGCGAATTTTGGCAATGTC+GGG | - | chr3.1:64592973-64592992 | None:intergenic | 40.0% |
| AAAGGAGCAAGTCAAACCGA+AGG | + | chr3.1:64592384-64592403 | MS.gene70573:CDS | 45.0% | |
| AAGATGTCAAGGGCTCAAGA+TGG | + | chr3.1:64592460-64592479 | MS.gene70573:CDS | 45.0% | |
| AAGCTGACAATGCAATTCCG+GGG | + | chr3.1:64592656-64592675 | MS.gene70573:CDS | 45.0% | |
| AAGGGAGATATGCATGGAGT+AGG | + | chr3.1:64594017-64594036 | MS.gene70573:CDS | 45.0% | |
| AAGGTTAGGTTTGACCGCAA+CGG | + | chr3.1:64592610-64592629 | MS.gene70573:CDS | 45.0% | |
| AATGGCTCAGCCGGTTAATA+TGG | + | chr3.1:64593572-64593591 | MS.gene70573:CDS | 45.0% | |
| ACTTGGATTTCGTGAGGAAG+CGG | + | chr3.1:64593319-64593338 | MS.gene70573:CDS | 45.0% | |
| ATATTAACCGGCTGAGCCAT+TGG | - | chr3.1:64593573-64593592 | None:intergenic | 45.0% | |
| CAAGCTGACAATGCAATTCC+GGG | + | chr3.1:64592655-64592674 | MS.gene70573:CDS | 45.0% | |
| CATGCCTTCTTCAGATCATG+AGG | - | chr3.1:64592910-64592929 | None:intergenic | 45.0% | |
| CCAAGCTGACAATGCAATTC+CGG | + | chr3.1:64592654-64592673 | MS.gene70573:CDS | 45.0% | |
| CCACCTTCCATCGATATAAC+TGG | + | chr3.1:64593597-64593616 | MS.gene70573:CDS | 45.0% | |
| CCAGTTATATCGATGGAAGG+TGG | - | chr3.1:64593600-64593619 | None:intergenic | 45.0% | |
| CCTTATAGCCAAGCTCACAT+CGG | + | chr3.1:64593405-64593424 | MS.gene70573:CDS | 45.0% | |
| CTCATGATCTGAAGAAGGCA+TGG | + | chr3.1:64592908-64592927 | MS.gene70573:CDS | 45.0% | |
| CTTCCTCACGAAATCCAAGT+TGG | - | chr3.1:64593319-64593338 | None:intergenic | 45.0% | |
| GACTTTCGCAATGAAGGAAG+AGG | + | chr3.1:64593287-64593306 | MS.gene70573:CDS | 45.0% | |
| GAGAATTACTTCAGGGGTCA+AGG | + | chr3.1:64593777-64593796 | MS.gene70573:CDS | 45.0% | |
| GAGTTCAAGGGAGATATGCA+TGG | + | chr3.1:64594011-64594030 | MS.gene70573:CDS | 45.0% | |
| GATGGTGAGAAAAGGATTGG+TGG | + | chr3.1:64593636-64593655 | MS.gene70573:CDS | 45.0% | |
| GCTTGCAATCGTCAATCAAG+AGG | + | chr3.1:64593053-64593072 | MS.gene70573:CDS | 45.0% | |
| GGCAATGAGTATGATGTCGA+TGG | + | chr3.1:64593150-64593169 | MS.gene70573:CDS | 45.0% | |
| GGTAATATCCCCCTCAACTT+GGG | - | chr3.1:64592251-64592270 | None:intergenic | 45.0% | |
| GGTGCTTCTCAAGCGATTAA+AGG | + | chr3.1:64592366-64592385 | MS.gene70573:CDS | 45.0% | |
| GTAATATCCCCCTCAACTTG+GGG | - | chr3.1:64592250-64592269 | None:intergenic | 45.0% | |
| GTCAGCTTGGTACTTGGATA+TGG | - | chr3.1:64592644-64592663 | None:intergenic | 45.0% | |
| GTGGGGACCCAAACATTAAA+TGG | - | chr3.1:64593971-64593990 | None:intergenic | 45.0% | |
| TATGCATGGAGTAGGCATCA+TGG | + | chr3.1:64594025-64594044 | MS.gene70573:CDS | 45.0% | |
| TCAGCAGACTTTCGCAATGA+AGG | + | chr3.1:64593281-64593300 | MS.gene70573:CDS | 45.0% | |
| TCTCTCCATCATCCCAATGT+TGG | - | chr3.1:64593238-64593257 | None:intergenic | 45.0% | |
| TGACCAACTTGGATTTCGTG+AGG | + | chr3.1:64593313-64593332 | MS.gene70573:CDS | 45.0% | |
| TGCAATCGTCAATCAAGAGG+AGG | + | chr3.1:64593056-64593075 | MS.gene70573:CDS | 45.0% | |
| TGCAGATAAGAGAGAACCCA+AGG | - | chr3.1:64592746-64592765 | None:intergenic | 45.0% | |
| TGCATTGTCAGCTTGGTACT+TGG | - | chr3.1:64592650-64592669 | None:intergenic | 45.0% | |
| TTACTTCAGGGGTCAAGGAA+TGG | + | chr3.1:64593782-64593801 | MS.gene70573:CDS | 45.0% | |
| TTCGGTTGAACGAATGACTG+AGG | - | chr3.1:64593549-64593568 | None:intergenic | 45.0% | |
| TTGATTGACGATTGCAAGCC+AGG | - | chr3.1:64593052-64593071 | None:intergenic | 45.0% | |
| TTGCCTTCATTGATGCCGAA+AGG | - | chr3.1:64593135-64593154 | None:intergenic | 45.0% | |
| ! | AATGATGGAGGCAATCCGAT+CGG | + | chr3.1:64592682-64592701 | MS.gene70573:CDS | 45.0% |
| ! | AGGCTCAAGGGTTTGTTTAC+GGG | + | chr3.1:64592521-64592540 | MS.gene70573:CDS | 45.0% |
| ! | GATCATGAGATGGCTCTATC+TGG | + | chr3.1:64592196-64592215 | MS.gene70573:CDS | 45.0% |
| ! | GGACTTGGAGTTTCTGAAGA+TGG | + | chr3.1:64593618-64593637 | MS.gene70573:CDS | 45.0% |
| ! | TGATCTGAAGAAGGCATGGA+AGG | + | chr3.1:64592912-64592931 | MS.gene70573:CDS | 45.0% |
| ! | TTTTCCAGACAGGGCTTCTA+GGG | + | chr3.1:64593428-64593447 | MS.gene70573:CDS | 45.0% |
| !! | AGAGGAGCCGAATTTTGATG+TGG | + | chr3.1:64593179-64593198 | MS.gene70573:CDS | 45.0% |
| !!! | TCACATCGGTTTTCCAGACA+GGG | + | chr3.1:64593419-64593438 | MS.gene70573:CDS | 45.0% |
| AAAGGTCCAGCTGCGACAAA+TGG | - | chr3.1:64593117-64593136 | None:intergenic | 50.0% | |
| AAGGTCCAGCTGCGACAAAT+GGG | - | chr3.1:64593116-64593135 | None:intergenic | 50.0% | |
| AGAAAGGAAAGCCTGTGACC+GGG | + | chr3.1:64592554-64592573 | MS.gene70573:CDS | 50.0% | |
| AGGCGGTTTCCATTGGAGAA+GGG | + | chr3.1:64592793-64592812 | MS.gene70573:CDS | 50.0% | |
| ATGGAGGTTTGCAAGGCTCA+AGG | + | chr3.1:64592508-64592527 | MS.gene70573:CDS | 50.0% | |
| ATTCCGGGGAAGAATGATGG+AGG | + | chr3.1:64592670-64592689 | MS.gene70573:CDS | 50.0% | |
| CATCGGATAATCTCCGCGAA+TGG | + | chr3.1:64592578-64592597 | MS.gene70573:CDS | 50.0% | |
| CCGATGTGAGCTTGGCTATA+AGG | - | chr3.1:64593408-64593427 | None:intergenic | 50.0% | |
| CCGGAATTGCATTGTCAGCT+TGG | - | chr3.1:64592657-64592676 | None:intergenic | 50.0% | |
| CCTTATCCTTCCACCATTCG+CGG | - | chr3.1:64592594-64592613 | None:intergenic | 50.0% | |
| CGGTAATATCCCCCTCAACT+TGG | - | chr3.1:64592252-64592271 | None:intergenic | 50.0% | |
| CTGGAAAACCGATGTGAGCT+TGG | - | chr3.1:64593416-64593435 | None:intergenic | 50.0% | |
| GAGAAAGGAAAGCCTGTGAC+CGG | + | chr3.1:64592553-64592572 | MS.gene70573:CDS | 50.0% | |
| GAGCAAGTCAAACCGAAGGA+AGG | + | chr3.1:64592388-64592407 | MS.gene70573:CDS | 50.0% | |
| GCAATTCCGGGGAAGAATGA+TGG | + | chr3.1:64592667-64592686 | MS.gene70573:CDS | 50.0% | |
| GGACCTTTCGGCATCAATGA+AGG | + | chr3.1:64593129-64593148 | MS.gene70573:CDS | 50.0% | |
| GGTCACAGGCTTTCCTTTCT+CGG | - | chr3.1:64592554-64592573 | None:intergenic | 50.0% | |
| GTCACAGGCTTTCCTTTCTC+GGG | - | chr3.1:64592553-64592572 | None:intergenic | 50.0% | |
| TACGGGATCATTCCCGAGAA+AGG | + | chr3.1:64592538-64592557 | MS.gene70573:CDS | 50.0% | |
| TGAGGTTTCTTGTAAGGCGG+AGG | - | chr3.1:64592892-64592911 | None:intergenic | 50.0% | |
| TGGAGGTTTGCAAGGCTCAA+GGG | + | chr3.1:64592509-64592528 | MS.gene70573:CDS | 50.0% | |
| TGGTACTTGGATATGGCAGC+AGG | - | chr3.1:64592637-64592656 | None:intergenic | 50.0% | |
| TTGATGTTGCCGAGCTTGAG+AGG | + | chr3.1:64592326-64592345 | MS.gene70573:CDS | 50.0% | |
| TTGCCTCCATCATTCTTCCC+CGG | - | chr3.1:64592676-64592695 | None:intergenic | 50.0% | |
| TTTCCTCCTTGCCTGTTCCT+GGG | - | chr3.1:64592440-64592459 | None:intergenic | 50.0% | |
| TTTGTCGCAGCTGGACCTTT+CGG | + | chr3.1:64593117-64593136 | MS.gene70573:CDS | 50.0% | |
| ! | CTGAAGAAGGCATGGAAGGT+TGG | + | chr3.1:64592916-64592935 | MS.gene70573:CDS | 50.0% |
| ! | GATGGCTCTATCTGGTGATC+TGG | + | chr3.1:64592204-64592223 | MS.gene70573:CDS | 50.0% |
| ! | GATTTTCCGCTGCGGTTAAG+TGG | - | chr3.1:64593719-64593738 | None:intergenic | 50.0% |
| ! | GTTTTCCAGACAGGGCTTCT+AGG | + | chr3.1:64593427-64593446 | MS.gene70573:CDS | 50.0% |
| ! | TAATCTCCGCGAATGGTGGA+AGG | + | chr3.1:64592585-64592604 | MS.gene70573:CDS | 50.0% |
| ! | TGCTGAATGCTGCTAGCTTG+CGG | - | chr3.1:64593750-64593769 | None:intergenic | 50.0% |
| ! | TTTTCCTCCTTGCCTGTTCC+TGG | - | chr3.1:64592441-64592460 | None:intergenic | 50.0% |
| !! | GGAGCCGAATTTTGATGTGG+AGG | + | chr3.1:64593182-64593201 | MS.gene70573:CDS | 50.0% |
| !! | GGTCAAGGAATGGTGATGGA+AGG | + | chr3.1:64593792-64593811 | MS.gene70573:CDS | 50.0% |
| !!! | CTCACATCGGTTTTCCAGAC+AGG | + | chr3.1:64593418-64593437 | MS.gene70573:CDS | 50.0% |
| AACACTGTGATCCCCCTCAG+AGG | + | chr3.1:64592773-64592792 | MS.gene70573:CDS | 55.0% | |
| AATCCCAGGAACAGGCAAGG+AGG | + | chr3.1:64592434-64592453 | MS.gene70573:CDS | 55.0% | |
| ACCGAAACCAATGGCTCAGC+CGG | + | chr3.1:64593563-64593582 | MS.gene70573:CDS | 55.0% | |
| ACCGAAGGAAGGATCCGATG+CGG | + | chr3.1:64592399-64592418 | MS.gene70573:CDS | 55.0% | |
| AGAGCTGCAGGACACAACCT+TGG | + | chr3.1:64592726-64592745 | MS.gene70573:CDS | 55.0% | |
| AGCTTGAGAGGAGGATGTGG+AGG | + | chr3.1:64592338-64592357 | MS.gene70573:CDS | 55.0% | |
| AGGATAAAGCTCCCGCGCTA+AGG | - | chr3.1:64593082-64593101 | None:intergenic | 55.0% | |
| AGGTCCAGCTGCGACAAATG+GGG | - | chr3.1:64593115-64593134 | None:intergenic | 55.0% | |
| ATATGGCAGCAGGACCGTTG+CGG | - | chr3.1:64592627-64592646 | None:intergenic | 55.0% | |
| ATCAAGAGGAGGCCTTAGCG+CGG | + | chr3.1:64593067-64593086 | MS.gene70573:CDS | 55.0% | |
| ATCCCCCTCAACTTGGGGTT+GGG | - | chr3.1:64592245-64592264 | None:intergenic | 55.0% | |
| ATGTTGCCGAGCTTGAGAGG+AGG | + | chr3.1:64592329-64592348 | MS.gene70573:CDS | 55.0% | |
| CAATGGAAACCGCCTCTGAG+GGG | - | chr3.1:64592788-64592807 | None:intergenic | 55.0% | |
| CACCACTCTTCCTTCCCTGT+AGG | - | chr3.1:64592838-64592857 | None:intergenic | 55.0% | |
| CAGCTCTTGCAAGGTGTGAG+GGG | - | chr3.1:64592713-64592732 | None:intergenic | 55.0% | |
| CAGGGGTCAAGGAATGGTGA+TGG | + | chr3.1:64593788-64593807 | MS.gene70573:CDS | 55.0% | |
| CCAATGGAAACCGCCTCTGA+GGG | - | chr3.1:64592789-64592808 | None:intergenic | 55.0% | |
| CCACATCCTCCTCTCAAGCT+CGG | - | chr3.1:64592338-64592357 | None:intergenic | 55.0% | |
| CGGATAATCTCCGCGAATGG+TGG | + | chr3.1:64592581-64592600 | MS.gene70573:CDS | 55.0% | |
| CTACAGGGAAGGAAGAGTGG+TGG | + | chr3.1:64592836-64592855 | MS.gene70573:CDS | 55.0% | |
| GAAAGGAAAGCCTGTGACCG+GGG | + | chr3.1:64592555-64592574 | MS.gene70573:CDS | 55.0% | |
| GAAGAGTGGTGGCCCCAAAT+CGG | + | chr3.1:64592847-64592866 | MS.gene70573:CDS | 55.0% | |
| GAGCTGCAGGACACAACCTT+GGG | + | chr3.1:64592727-64592746 | MS.gene70573:CDS | 55.0% | |
| GAGGAGGATGTGGAGGGATA+AGG | + | chr3.1:64592345-64592364 | MS.gene70573:CDS | 55.0% | |
| GAGGCGGTTTCCATTGGAGA+AGG | + | chr3.1:64592792-64592811 | MS.gene70573:CDS | 55.0% | |
| GCAGCTCTTGCAAGGTGTGA+GGG | - | chr3.1:64592714-64592733 | None:intergenic | 55.0% | |
| GCTAACTGAACCTGAGGCGA+TGG | + | chr3.1:64592276-64592295 | MS.gene70573:CDS | 55.0% | |
| GCTTGAGAGGAGGATGTGGA+GGG | + | chr3.1:64592339-64592358 | MS.gene70573:CDS | 55.0% | |
| GGAAGAGGCTGTGACCAACT+TGG | + | chr3.1:64593302-64593321 | MS.gene70573:CDS | 55.0% | |
| GGAGGAACACCCTTCTCCAA+TGG | - | chr3.1:64592805-64592824 | None:intergenic | 55.0% | |
| GGCGGAGGACCTTGATCTTT+CGG | - | chr3.1:64592877-64592896 | None:intergenic | 55.0% | |
| GTATCCCTAGAAGCCCTGTC+TGG | - | chr3.1:64593435-64593454 | None:intergenic | 55.0% | |
| GTGAGGAAGCGGAAGATCTC+TGG | + | chr3.1:64593330-64593349 | MS.gene70573:CDS | 55.0% | |
| TATCCCCCTCAACTTGGGGT+TGG | - | chr3.1:64592246-64592265 | None:intergenic | 55.0% | |
| TCACACCTTGCAAGAGCTGC+AGG | + | chr3.1:64592714-64592733 | MS.gene70573:CDS | 55.0% | |
| TCCAATGGAAACCGCCTCTG+AGG | - | chr3.1:64592790-64592809 | None:intergenic | 55.0% | |
| TCGCCTCAGGTTCAGTTAGC+CGG | - | chr3.1:64592276-64592295 | None:intergenic | 55.0% | |
| TCTTCGTCAACCATCGCCTC+AGG | - | chr3.1:64592289-64592308 | None:intergenic | 55.0% | |
| TCTTGCAAGGTGTGAGGGGT+TGG | - | chr3.1:64592709-64592728 | None:intergenic | 55.0% | |
| TGATGTCGATGGGGGAGAAG+AGG | + | chr3.1:64593161-64593180 | MS.gene70573:CDS | 55.0% | |
| TGCAGCTCTTGCAAGGTGTG+AGG | - | chr3.1:64592715-64592734 | None:intergenic | 55.0% | |
| TGTGTCCTGCAGCTCTTGCA+AGG | - | chr3.1:64592722-64592741 | None:intergenic | 55.0% | |
| TTCCTGGGATTGCCTCTGCT+TGG | - | chr3.1:64592425-64592444 | None:intergenic | 55.0% | |
| TTGAGGGGGATATTACCGCC+CGG | + | chr3.1:64592254-64592273 | MS.gene70573:CDS | 55.0% | |
| ! | AATGGAAACCGCCTCTGAGG+GGG | - | chr3.1:64592787-64592806 | None:intergenic | 55.0% |
| ! | CCGCGAATGGTGGAAGGATA+AGG | + | chr3.1:64592591-64592610 | MS.gene70573:CDS | 55.0% |
| ! | CGGCTAAGGAAAGTGCAACC+TGG | + | chr3.1:64593031-64593050 | MS.gene70573:CDS | 55.0% |
| !! | ACCGGCTGAGCCATTGGTTT+CGG | - | chr3.1:64593567-64593586 | None:intergenic | 55.0% |
| !! | AGAAGGGTGTTCCTCCTCCA+TGG | + | chr3.1:64592809-64592828 | MS.gene70573:CDS | 55.0% |
| AAAGCCTGTGACCGGGGCAT+CGG | + | chr3.1:64592561-64592580 | MS.gene70573:CDS | 60.0% | |
| ACTGTGATCCCCCTCAGAGG+CGG | + | chr3.1:64592776-64592795 | MS.gene70573:CDS | 60.0% | |
| ATCCCCCCATTTGTCGCAGC+TGG | + | chr3.1:64593108-64593127 | MS.gene70573:CDS | 60.0% | |
| CCCTCAGAGGCGGTTTCCAT+TGG | + | chr3.1:64592786-64592805 | MS.gene70573:CDS | 60.0% | |
| CCGAGCTTGAGAGGAGGATG+TGG | + | chr3.1:64592335-64592354 | MS.gene70573:CDS | 60.0% | |
| CGCCTCAGGTTCAGTTAGCC+GGG | - | chr3.1:64592275-64592294 | None:intergenic | 60.0% | |
| CTCAGGTTCAGTTAGCCGGG+CGG | - | chr3.1:64592272-64592291 | None:intergenic | 60.0% | |
| CTCCTCCATGGTGGCCTACA+GGG | + | chr3.1:64592821-64592840 | MS.gene70573:CDS | 60.0% | |
| GCAGAGGCAATCCCAGGAAC+AGG | + | chr3.1:64592426-64592445 | MS.gene70573:CDS | 60.0% | |
| GCCGCATCGGATCCTTCCTT+CGG | - | chr3.1:64592403-64592422 | None:intergenic | 60.0% | |
| GCGGAGATTATCCGATGCCC+CGG | - | chr3.1:64592575-64592594 | None:intergenic | 60.0% | |
| GGCAATCCCAGGAACAGGCA+AGG | + | chr3.1:64592431-64592450 | MS.gene70573:CDS | 60.0% | |
| GGCCTACAGGGAAGGAAGAG+TGG | + | chr3.1:64592833-64592852 | MS.gene70573:CDS | 60.0% | |
| GGTCCAGCTGCGACAAATGG+GGG | - | chr3.1:64593114-64593133 | None:intergenic | 60.0% | |
| GTCCAGCTGCGACAAATGGG+GGG | - | chr3.1:64593113-64593132 | None:intergenic | 60.0% | |
| GTGTGAGGGGTTGGACCGAT+CGG | - | chr3.1:64592700-64592719 | None:intergenic | 60.0% | |
| TCAAGAGGAGGCCTTAGCGC+GGG | + | chr3.1:64593068-64593087 | MS.gene70573:CDS | 60.0% | |
| TCCATGGTGGCCTACAGGGA+AGG | + | chr3.1:64592825-64592844 | MS.gene70573:CDS | 60.0% | |
| TCCCCCTCAACTTGGGGTTG+GGG | - | chr3.1:64592244-64592263 | None:intergenic | 60.0% | |
| TCCTTCCCTGTAGGCCACCA+TGG | - | chr3.1:64592829-64592848 | None:intergenic | 60.0% | |
| TGCTCCCCAACCCCAAGTTG+AGG | + | chr3.1:64592237-64592256 | MS.gene70573:CDS | 60.0% | |
| TGGCAGCCACTTAACCGCAG+CGG | + | chr3.1:64593710-64593729 | MS.gene70573:CDS | 60.0% | |
| TTATCCGATGCCCCGGTCAC+AGG | - | chr3.1:64592568-64592587 | None:intergenic | 60.0% | |
| TTCCCTGTAGGCCACCATGG+AGG | - | chr3.1:64592826-64592845 | None:intergenic | 60.0% | |
| TTGCCTCTGCTTGGCCGCAT+CGG | - | chr3.1:64592416-64592435 | None:intergenic | 60.0% | |
| ! | AGGGTGTTCCTCCTCCATGG+TGG | + | chr3.1:64592812-64592831 | MS.gene70573:CDS | 60.0% |
| ! | CTCCCCAACCCCAAGTTGAG+GGG | + | chr3.1:64592239-64592258 | MS.gene70573:CDS | 60.0% |
| ! | GCTCCCCAACCCCAAGTTGA+GGG | + | chr3.1:64592238-64592257 | MS.gene70573:CDS | 60.0% |
| ! | TCCCCAACCCCAAGTTGAGG+GGG | + | chr3.1:64592240-64592259 | MS.gene70573:CDS | 60.0% |
| CCTCCTCCATGGTGGCCTAC+AGG | + | chr3.1:64592820-64592839 | MS.gene70573:CDS | 65.0% | |
| CCTGTAGGCCACCATGGAGG+AGG | - | chr3.1:64592823-64592842 | None:intergenic | 65.0% | |
| CGCCCGGCTAACTGAACCTG+AGG | + | chr3.1:64592270-64592289 | MS.gene70573:CDS | 65.0% | |
| GATCCGATGCGGCCAAGCAG+AGG | + | chr3.1:64592410-64592429 | MS.gene70573:CDS | 65.0% | |
| GGCCAAGCAGAGGCAATCCC+AGG | + | chr3.1:64592420-64592439 | MS.gene70573:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 64592181 | 64594097 | 64592181 | ID=MS.gene70573 |
| chr3.1 | mRNA | 64592181 | 64594097 | 64592181 | ID=MS.gene70573.t1;Parent=MS.gene70573 |
| chr3.1 | exon | 64592181 | 64594097 | 64592181 | ID=MS.gene70573.t1.exon1;Parent=MS.gene70573.t1 |
| chr3.1 | CDS | 64592181 | 64594097 | 64592181 | ID=cds.MS.gene70573.t1;Parent=MS.gene70573.t1 |
| Gene Sequence |
| Protein sequence |
