AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene70634

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70634.t1 MTR_3g077650 98.507 335 5 0 1 335 113 447 0.0 695
MS.gene70634.t1 MTR_4g105660 58.438 320 119 6 1 314 111 422 3.51e-124 363
MS.gene70634.t1 MTR_5g049190 57.986 288 70 8 36 318 1 242 4.29e-108 315
MS.gene70634.t1 MTR_4g088015 71.756 131 37 0 63 193 215 345 4.35e-60 199
MS.gene70634.t1 MTR_7g037260 70.866 127 37 0 63 189 139 265 1.35e-59 195
MS.gene70634.t1 MTR_3g463400 53.723 188 76 3 15 192 75 261 1.05e-58 196
MS.gene70634.t1 MTR_7g451170 73.228 127 34 0 63 189 185 311 1.95e-58 194
MS.gene70634.t1 MTR_5g070020 61.379 145 48 2 54 191 108 251 1.95e-56 187
MS.gene70634.t1 MTR_7g037130 66.142 127 43 0 63 189 139 265 7.27e-54 181
MS.gene70634.t1 MTR_7g035350 53.205 156 72 1 62 216 218 373 1.67e-48 169
MS.gene70634.t1 MTR_7g450950 58.696 138 55 2 59 194 147 284 1.17e-47 164
MS.gene70634.t1 MTR_1g057980 44.131 213 108 4 5 216 17 219 2.03e-47 162
MS.gene70634.t1 MTR_7g061330 59.649 114 46 0 67 180 111 224 5.98e-41 150
MS.gene70634.t1 MTR_7g461410 59.649 114 46 0 67 180 111 224 5.98e-41 150
MS.gene70634.t1 MTR_7g061330 59.649 114 46 0 67 180 75 188 9.36e-41 149
MS.gene70634.t1 MTR_1g026870 58.252 103 43 0 67 169 83 185 4.03e-39 147
MS.gene70634.t1 MTR_3g110028 59.223 103 42 0 67 169 83 185 7.85e-39 146
MS.gene70634.t1 MTR_5g010650 57.143 98 42 0 66 163 107 204 2.30e-35 134
MS.gene70634.t1 MTR_4g094982 53.704 108 50 0 68 175 4 111 1.08e-34 128
MS.gene70634.t1 MTR_3g101290 39.869 153 90 1 62 214 30 180 1.23e-33 124
MS.gene70634.t1 MTR_5g016510 52.885 104 49 0 68 171 4 107 1.44e-33 126
MS.gene70634.t1 MTR_4g019370 53.922 102 47 0 68 169 37 138 3.31e-33 126
MS.gene70634.t1 MTR_5g082910 53.061 98 46 0 68 165 18 115 1.29e-30 117
MS.gene70634.t1 MTR_6g015455 49.038 104 53 0 68 171 4 107 4.13e-29 118
MS.gene70634.t1 MTR_3g052450 46.610 118 58 3 64 179 37 151 2.54e-28 115
MS.gene70634.t1 MTR_6g027340 47.525 101 53 0 69 169 16 116 1.05e-27 107
MS.gene70634.t1 MTR_4g100720 47.321 112 56 2 54 164 2 111 1.37e-27 106
MS.gene70634.t1 MTR_5g079670 47.059 119 58 3 56 172 2 117 1.65e-27 107
MS.gene70634.t1 MTR_3g052430 46.552 116 57 3 66 179 40 152 1.66e-27 112
MS.gene70634.t1 MTR_6g074860 44.800 125 67 1 69 193 4 126 4.02e-27 107
MS.gene70634.t1 MTR_2g089450 35.023 217 113 8 69 266 14 221 6.03e-27 107
MS.gene70634.t1 MTR_4g082040 43.548 124 68 1 69 192 105 226 1.02e-26 109
MS.gene70634.t1 MTR_5g041570 40.136 147 84 2 52 198 117 259 1.02e-26 109
MS.gene70634.t1 MTR_2g011660 48.039 102 52 1 69 169 15 116 1.47e-26 108
MS.gene70634.t1 MTR_6g027360 47.525 101 53 0 69 169 78 178 2.27e-26 106
MS.gene70634.t1 MTR_3g461490 44.545 110 60 1 63 171 8 117 2.63e-26 107
MS.gene70634.t1 MTR_5g062790 39.597 149 78 4 69 207 11 157 2.64e-26 106
MS.gene70634.t1 MTR_2g089620 48.039 102 52 1 69 169 14 115 2.96e-26 106
MS.gene70634.t1 MTR_8g042410 37.415 147 82 3 41 186 18 155 4.50e-26 108
MS.gene70634.t1 MTR_5g007370 47.573 103 51 2 69 169 14 115 4.59e-26 105
MS.gene70634.t1 MTR_8g027345 47.059 102 53 1 64 164 9 110 5.67e-26 105
MS.gene70634.t1 MTR_4g073420 49.533 107 51 2 69 173 14 119 6.02e-26 105
MS.gene70634.t1 MTR_3g011610 43.443 122 64 3 61 180 31 149 8.34e-26 107
MS.gene70634.t1 MTR_5g029840 43.636 110 61 1 64 172 9 118 9.24e-26 105
MS.gene70634.t1 MTR_1g112760 43.925 107 57 2 69 173 15 120 1.16e-25 103
MS.gene70634.t1 MTR_2g089420 34.694 196 109 6 69 259 13 194 1.19e-25 107
MS.gene70634.t1 MTR_8g020490 47.170 106 55 1 69 173 10 115 1.25e-25 103
MS.gene70634.t1 MTR_7g086960 43.651 126 71 0 69 194 89 214 1.73e-25 105
MS.gene70634.t1 MTR_3g077110 43.925 107 57 2 69 173 14 119 1.95e-25 105
MS.gene70634.t1 MTR_0008s0390 41.026 117 65 3 55 169 2 116 2.12e-25 103
MS.gene70634.t1 MTR_4g091490 47.059 102 53 1 69 169 15 116 2.21e-25 105
MS.gene70634.t1 MTR_4g125520 29.876 241 138 7 56 280 3 228 2.52e-25 103
MS.gene70634.t1 MTR_1g043050 33.880 183 108 3 69 248 14 186 2.60e-25 102
MS.gene70634.t1 MTR_3g097450 48.598 107 51 3 69 172 14 119 2.73e-25 103
MS.gene70634.t1 MTR_4g485530 44.167 120 63 3 56 173 2 119 2.93e-25 100
MS.gene70634.t1 MTR_5g078140 44.144 111 59 2 64 172 9 118 3.50e-25 103
MS.gene70634.t1 MTR_6g009430 42.727 110 62 1 64 172 9 118 3.63e-25 103
MS.gene70634.t1 MTR_4g478180 47.573 103 51 2 69 169 15 116 3.88e-25 104
MS.gene70634.t1 MTR_4g121460 44.444 108 59 1 63 169 8 115 4.33e-25 103
MS.gene70634.t1 MTR_3g089045 47.368 114 57 1 69 179 16 129 4.41e-25 102
MS.gene70634.t1 MTR_8g095390 43.802 121 62 4 55 172 2 119 4.45e-25 103
MS.gene70634.t1 MTR_1g043080 45.098 102 55 1 69 169 14 115 4.51e-25 102
MS.gene70634.t1 MTR_7g117730 46.078 102 54 1 64 164 9 110 5.15e-25 102
MS.gene70634.t1 MTR_4g102380 43.243 111 60 2 64 172 9 118 5.89e-25 102
MS.gene70634.t1 MTR_4g105130 39.683 126 74 2 69 193 14 138 6.26e-25 103
MS.gene70634.t1 MTR_1g045610 30.213 235 123 7 69 275 23 244 6.32e-25 101
MS.gene70634.t1 MTR_1g110460 43.137 102 57 1 69 169 28 129 7.12e-25 102
MS.gene70634.t1 MTR_1g085040 44.660 103 54 2 69 169 14 115 9.94e-25 103
MS.gene70634.t1 MTR_0008s0470 41.176 102 59 1 69 169 15 116 1.04e-24 102
MS.gene70634.t1 MTR_3g065440 43.243 111 60 2 64 172 9 118 1.06e-24 102
MS.gene70634.t1 MTR_5g088080 44.737 114 59 3 69 180 14 125 1.16e-24 101
MS.gene70634.t1 MTR_5g088150 44.737 114 59 3 69 180 14 125 1.16e-24 101
MS.gene70634.t1 MTR_5g488210 44.737 114 59 3 69 180 14 125 1.16e-24 101
MS.gene70634.t1 MTR_5g088640 44.737 114 59 3 69 180 14 125 1.36e-24 101
MS.gene70634.t1 MTR_3g028740 43.443 122 61 2 56 169 4 125 1.51e-24 102
MS.gene70634.t1 MTR_5g088610 43.860 114 60 3 69 180 11 122 1.86e-24 102
MS.gene70634.t1 MTR_2g097910 45.098 102 55 1 69 169 22 123 1.91e-24 101
MS.gene70634.t1 MTR_0251s0050 39.655 116 68 2 55 169 2 116 2.04e-24 100
MS.gene70634.t1 MTR_2g064160 43.689 103 55 2 69 169 13 114 2.08e-24 101
MS.gene70634.t1 MTR_7g096930 44.660 103 56 1 63 164 8 110 2.21e-24 100
MS.gene70634.t1 MTR_5g488170 44.737 114 59 3 69 180 14 125 2.59e-24 99.8
MS.gene70634.t1 MTR_4g065017 42.857 119 63 2 56 169 2 120 3.84e-24 101
MS.gene70634.t1 MTR_7g115650 40.541 111 65 1 63 172 8 118 4.21e-24 98.2
MS.gene70634.t1 MTR_7g111290 48.454 97 47 2 69 163 14 109 4.56e-24 101
MS.gene70634.t1 MTR_6g027370 47.059 102 54 0 68 169 98 199 5.23e-24 101
MS.gene70634.t1 MTR_5g042030 42.727 110 62 1 61 169 1 110 6.57e-24 99.8
MS.gene70634.t1 MTR_1g073170 47.917 96 47 2 69 162 22 116 7.61e-24 99.0
MS.gene70634.t1 MTR_7g011170 42.342 111 63 1 63 172 8 118 8.39e-24 99.8
MS.gene70634.t1 MTR_3g074520 46.602 103 52 2 69 169 14 115 8.44e-24 100
MS.gene70634.t1 MTR_1g076150 39.831 118 68 2 63 178 8 124 9.51e-24 98.6
MS.gene70634.t1 MTR_1g085640 41.667 108 61 2 69 175 14 120 1.10e-23 100
MS.gene70634.t1 MTR_7g110830 42.593 108 60 2 69 175 14 120 1.14e-23 100
MS.gene70634.t1 MTR_2g034790 42.593 108 61 1 63 169 8 115 1.40e-23 99.8
MS.gene70634.t1 MTR_1g021230 43.363 113 58 2 69 180 59 166 1.42e-23 100
MS.gene70634.t1 MTR_8g017440 39.474 114 66 2 69 180 14 126 1.45e-23 99.8
MS.gene70634.t1 MTR_2g088170 46.774 124 61 3 59 180 21 141 1.72e-23 100
MS.gene70634.t1 MTR_5g010020 45.361 97 52 1 69 164 14 110 1.83e-23 99.4
MS.gene70634.t1 MTR_8g031360 47.170 106 48 4 64 164 10 112 2.05e-23 98.6
MS.gene70634.t1 MTR_8g098860 30.851 188 106 3 69 232 14 201 2.53e-23 98.6
MS.gene70634.t1 MTR_1g100653 41.593 113 64 2 69 180 14 125 2.65e-23 98.2
MS.gene70634.t1 MTR_8g006470 46.078 102 53 2 69 168 12 113 3.26e-23 97.8
MS.gene70634.t1 MTR_7g035075 45.263 95 51 1 69 162 16 110 3.87e-23 95.5
MS.gene70634.t1 MTR_8g017540 42.718 103 56 2 69 169 60 161 6.36e-23 98.6
MS.gene70634.t1 MTR_5g079290 33.929 168 104 4 69 234 19 181 1.17e-22 95.9
MS.gene70634.t1 MTR_4g063100 42.056 107 61 1 69 174 9 115 1.20e-22 95.5
MS.gene70634.t1 MTR_7g076740 35.928 167 77 6 69 230 14 155 1.20e-22 96.7
MS.gene70634.t1 MTR_2g099740 42.718 103 56 2 69 169 14 115 1.58e-22 97.4
MS.gene70634.t1 MTR_4g082230 37.324 142 78 4 63 194 8 148 2.10e-22 97.4
MS.gene70634.t1 MTR_0063s0090 42.373 118 60 3 69 184 14 125 2.16e-22 94.0
MS.gene70634.t1 MTR_7g017260 41.129 124 69 2 65 184 23 146 2.85e-22 94.7
MS.gene70634.t1 MTR_4g082290 36.879 141 80 3 63 194 8 148 3.04e-22 97.1
MS.gene70634.t1 MTR_8g017340 44.144 111 56 4 62 169 9 116 3.89e-22 97.1
MS.gene70634.t1 MTR_4g029540 44.118 102 55 2 69 168 12 113 4.09e-22 94.7
MS.gene70634.t1 MTR_8g017500 41.748 103 57 2 69 169 14 115 4.22e-22 95.9
MS.gene70634.t1 MTR_1g062940 39.655 116 67 2 66 179 5 119 4.30e-22 93.2
MS.gene70634.t1 MTR_5g079220 42.056 107 59 2 69 173 23 128 5.70e-22 94.0
MS.gene70634.t1 MTR_1g008970 59.459 74 29 1 92 164 113 186 6.10e-22 93.6
MS.gene70634.t1 MTR_6g012690 41.818 110 63 1 64 172 9 118 6.25e-22 95.5
MS.gene70634.t1 MTR_6g006030 40.741 108 63 1 56 162 3 110 7.74e-22 92.0
MS.gene70634.t1 MTR_8g017390 41.441 111 59 4 62 169 9 116 8.24e-22 96.3
MS.gene70634.t1 MTR_7g087130 41.441 111 64 1 63 172 8 118 8.63e-22 94.7
MS.gene70634.t1 MTR_4g097570 44.660 103 54 2 64 163 9 111 8.73e-22 94.0
MS.gene70634.t1 MTR_0247s0040 44.000 100 55 1 69 167 9 108 9.00e-22 91.3
MS.gene70634.t1 MTR_5g078910 42.718 103 56 2 69 169 9 110 9.12e-22 94.0
MS.gene70634.t1 MTR_6g055910 39.831 118 69 2 58 174 6 122 1.14e-21 93.2
MS.gene70634.t1 MTR_3g083540 39.216 102 61 1 64 164 38 139 1.51e-21 93.6
MS.gene70634.t1 MTR_8g017350 43.243 111 57 4 62 169 9 116 1.53e-21 95.9
MS.gene70634.t1 MTR_7g010210 41.121 107 62 1 69 174 14 120 1.58e-21 93.6
MS.gene70634.t1 MTR_7g010210 41.905 105 60 1 69 172 14 118 1.66e-21 92.8
MS.gene70634.t1 MTR_5g078950 40.000 100 59 1 69 167 9 108 1.70e-21 92.4
MS.gene70634.t1 MTR_3g039990 41.441 111 64 1 63 172 9 119 1.73e-21 93.6
MS.gene70634.t1 MTR_3g103570 42.982 114 62 3 64 174 9 122 1.78e-21 94.0
MS.gene70634.t1 MTR_0197s0010 47.368 95 47 2 72 164 6 99 1.93e-21 91.7
MS.gene70634.t1 MTR_1g017140 37.594 133 74 3 64 187 9 141 2.09e-21 93.6
MS.gene70634.t1 MTR_6g090405 40.171 117 66 3 56 170 3 117 2.55e-21 91.7
MS.gene70634.t1 MTR_0140s0030 39.640 111 66 1 63 172 9 119 2.93e-21 93.2
MS.gene70634.t1 MTR_0489s0020 39.640 111 66 1 63 172 9 119 2.93e-21 93.2
MS.gene70634.t1 MTR_0001s0360 39.623 106 63 1 69 173 9 114 3.29e-21 91.7
MS.gene70634.t1 MTR_5g078860 42.056 107 59 2 69 173 9 114 3.57e-21 92.4
MS.gene70634.t1 MTR_5g079120 38.346 133 70 3 60 184 54 182 3.64e-21 92.4
MS.gene70634.t1 MTR_5g038910 42.982 114 62 2 59 170 17 129 4.67e-21 94.0
MS.gene70634.t1 MTR_6g012180 44.330 97 53 1 69 164 14 110 6.27e-21 92.0
MS.gene70634.t1 MTR_1g017000 38.938 113 61 3 59 169 10 116 7.67e-21 90.5
MS.gene70634.t1 MTR_2g096380 41.667 108 60 2 69 174 8 114 8.49e-21 90.1
MS.gene70634.t1 MTR_4g097570 44.118 102 55 2 64 163 9 110 8.78e-21 91.3
MS.gene70634.t1 MTR_5g038910 43.564 101 55 1 72 170 29 129 9.68e-21 92.4
MS.gene70634.t1 MTR_7g109320 39.216 153 90 2 63 212 8 160 1.18e-20 91.7
MS.gene70634.t1 MTR_5g078800 41.121 107 60 2 69 173 9 114 1.27e-20 90.1
MS.gene70634.t1 MTR_5g014990 41.667 108 61 2 64 169 9 116 1.89e-20 90.5
MS.gene70634.t1 MTR_1g100667 40.000 105 62 1 69 172 15 119 2.62e-20 89.4
MS.gene70634.t1 MTR_2g095520 43.689 103 56 2 64 164 9 111 2.97e-20 90.1
MS.gene70634.t1 MTR_1g086510 40.187 107 63 1 69 174 23 129 4.24e-20 88.6
MS.gene70634.t1 MTR_0193s0090 41.584 101 58 1 69 168 9 109 4.35e-20 87.4
MS.gene70634.t1 MTR_1g086530 39.815 108 62 2 69 174 35 141 4.79e-20 89.0
MS.gene70634.t1 MTR_5g078930 43.878 98 52 2 69 164 11 107 5.52e-20 87.4
MS.gene70634.t1 MTR_8g468380 38.776 98 60 0 72 169 25 122 5.62e-20 90.5
MS.gene70634.t1 MTR_8g060940 41.237 97 56 1 69 164 9 105 7.52e-20 87.4
MS.gene70634.t1 MTR_2g033170 37.838 111 67 2 64 173 21 130 1.47e-19 88.2
MS.gene70634.t1 MTR_4g128670 43.689 103 56 2 64 164 9 111 1.62e-19 88.6
MS.gene70634.t1 MTR_1g083630 40.566 106 62 1 65 169 10 115 1.89e-19 89.7
MS.gene70634.t1 MTR_0008s0280 39.175 97 58 1 69 164 14 110 2.20e-19 85.9
MS.gene70634.t1 MTR_7g035300 36.364 165 76 5 28 175 18 170 2.35e-19 85.9
MS.gene70634.t1 MTR_2g067420 42.268 97 55 1 69 164 16 112 7.96e-19 86.3
MS.gene70634.t1 MTR_4g128190 43.564 101 44 3 69 168 13 101 1.02e-18 84.3
MS.gene70634.t1 MTR_4g057635 39.815 108 63 2 64 169 9 116 1.50e-18 85.5
MS.gene70634.t1 MTR_7g102110 38.889 108 64 2 64 169 9 116 3.21e-18 83.6
MS.gene70634.t1 MTR_4g123040 41.000 100 56 2 65 162 22 120 3.69e-18 84.0
MS.gene70634.t1 MTR_7g111290 54.839 62 28 0 102 163 6 67 3.93e-18 84.3
MS.gene70634.t1 MTR_7g061550 40.741 108 61 2 71 175 9 116 5.25e-17 81.3
MS.gene70634.t1 MTR_3g045430 35.294 102 65 1 72 172 18 119 5.36e-17 80.5
MS.gene70634.t1 MTR_6g055910 43.836 73 41 0 102 174 21 93 7.89e-17 79.3
MS.gene70634.t1 MTR_4g063100 41.463 82 47 1 93 174 6 86 2.76e-16 77.0
MS.gene70634.t1 MTR_1g085880 38.739 111 64 3 72 180 17 125 1.83e-15 74.3
MS.gene70634.t1 MTR_1g085770 38.739 111 64 3 72 180 17 125 5.03e-15 75.1
MS.gene70634.t1 MTR_2g096380 39.726 73 44 0 102 174 23 95 4.80e-14 70.9
MS.gene70634.t1 MTR_6g080360 34.711 121 78 1 69 189 530 649 4.17e-13 70.9
MS.gene70634.t1 MTR_6g080360 35.052 97 62 1 66 162 476 571 3.18e-11 65.1
MS.gene70634.t1 MTR_5g007300 42.667 75 42 1 69 142 66 140 6.04e-13 65.9
MS.gene70634.t1 MTR_6g080360 34.711 121 78 1 69 189 310 429 9.44e-13 69.7
MS.gene70634.t1 MTR_6g080360 35.052 97 62 1 66 162 256 351 6.93e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70634.t1 AT4G18770 53.265 291 115 5 3 281 145 426 5.37e-95 288
MS.gene70634.t1 AT3G27785 64.000 150 50 2 53 198 173 322 3.53e-60 199
MS.gene70634.t1 AT5G58850 62.329 146 42 2 60 192 96 241 5.25e-55 186
MS.gene70634.t1 AT5G11050 45.064 233 115 5 66 292 102 327 2.60e-53 181
MS.gene70634.t1 AT5G40360 58.696 138 55 1 62 197 151 288 2.49e-50 171
MS.gene70634.t1 AT3G09370 59.167 120 47 1 66 183 127 246 1.57e-41 151
MS.gene70634.t1 AT3G09370 59.167 120 47 1 66 183 132 251 1.74e-41 151
MS.gene70634.t1 AT3G09370 59.167 120 47 1 66 183 140 259 1.93e-41 151
MS.gene70634.t1 AT5G02320 61.165 103 40 0 67 169 125 227 1.27e-39 147
MS.gene70634.t1 AT5G02320 61.165 103 40 0 67 169 125 227 1.27e-39 147
MS.gene70634.t1 AT5G02320 61.165 103 40 0 67 169 65 167 1.36e-39 145
MS.gene70634.t1 AT2G25230 48.529 136 70 0 60 195 17 152 5.81e-39 138
MS.gene70634.t1 AT5G11510 53.279 122 51 1 67 188 79 194 2.38e-38 145
MS.gene70634.t1 AT5G11510 53.279 122 51 1 67 188 79 194 2.38e-38 145
MS.gene70634.t1 AT5G11510 53.279 122 51 1 67 188 79 194 2.38e-38 145
MS.gene70634.t1 AT5G11510 53.279 122 51 1 67 188 79 194 3.13e-38 145
MS.gene70634.t1 AT5G11510 53.279 122 51 1 67 188 79 194 3.25e-38 144
MS.gene70634.t1 AT4G32730 55.000 120 49 1 67 186 85 199 3.28e-38 145
MS.gene70634.t1 AT4G32730 55.000 120 49 1 67 186 85 199 3.28e-38 145
MS.gene70634.t1 AT4G32730 55.000 120 49 1 67 186 85 199 3.28e-38 145
MS.gene70634.t1 AT4G32730 55.000 120 49 1 67 186 85 199 3.28e-38 145
MS.gene70634.t1 AT4G32730 55.000 120 49 1 67 186 85 199 4.68e-38 144
MS.gene70634.t1 AT3G55730 45.833 144 76 1 68 209 55 198 1.73e-36 135
MS.gene70634.t1 AT5G40430 46.154 143 74 3 60 201 45 185 2.11e-35 129
MS.gene70634.t1 AT4G37260 51.351 111 54 0 61 171 5 115 1.06e-33 126
MS.gene70634.t1 AT4G00540 59.615 104 39 1 69 169 103 206 1.74e-33 128
MS.gene70634.t1 AT2G23290 51.351 111 54 0 61 171 5 115 2.35e-33 125
MS.gene70634.t1 AT4G00540 59.615 104 39 1 69 169 101 204 5.00e-33 127
MS.gene70634.t1 AT3G09230 53.398 103 48 0 68 170 54 156 1.29e-31 122
MS.gene70634.t1 AT3G50060 48.077 104 54 0 68 171 5 108 4.55e-30 116
MS.gene70634.t1 AT5G67300 50.000 102 51 0 68 169 5 106 6.99e-30 116
MS.gene70634.t1 AT3G29020 50.000 106 50 1 69 171 65 170 1.04e-28 111
MS.gene70634.t1 AT3G29020 50.000 106 50 1 69 171 67 172 3.54e-28 111
MS.gene70634.t1 AT3G11440 46.491 114 56 3 69 180 43 153 6.52e-28 113
MS.gene70634.t1 AT2G39880 49.020 102 52 0 68 169 49 150 8.75e-28 111
MS.gene70634.t1 AT5G26660 36.527 167 100 4 69 233 14 176 1.30e-27 110
MS.gene70634.t1 AT3G11440 43.077 130 65 4 69 196 43 165 1.42e-27 113
MS.gene70634.t1 AT3G11440 43.077 130 65 4 69 196 43 165 1.42e-27 113
MS.gene70634.t1 AT3G11440 43.077 130 65 4 69 196 43 165 1.42e-27 113
MS.gene70634.t1 AT5G14750 40.000 120 71 1 67 185 16 135 1.72e-27 107
MS.gene70634.t1 AT3G28470 37.013 154 95 2 64 216 9 161 2.65e-27 109
MS.gene70634.t1 AT1G22640 48.673 113 55 2 63 173 8 119 2.70e-27 108
MS.gene70634.t1 AT2G26960 35.484 186 95 4 64 248 17 178 3.03e-27 111
MS.gene70634.t1 AT1G69560 41.549 142 75 2 44 179 92 231 3.17e-27 109
MS.gene70634.t1 AT1G69560 41.549 142 75 2 44 179 76 215 3.42e-27 109
MS.gene70634.t1 AT1G74430 46.226 106 56 1 69 173 14 119 4.88e-27 107
MS.gene70634.t1 AT4G28110 49.020 102 51 1 69 169 14 115 4.91e-27 108
MS.gene70634.t1 AT4G26930 44.248 113 60 2 69 180 21 131 1.14e-26 108
MS.gene70634.t1 AT2G32460 47.826 115 53 4 69 180 8 118 1.15e-26 110
MS.gene70634.t1 AT4G38620 50.467 107 50 2 69 173 14 119 1.17e-26 107
MS.gene70634.t1 AT2G32460 47.826 115 53 4 69 180 20 130 1.19e-26 110
MS.gene70634.t1 AT5G06100 44.737 114 58 3 69 180 34 144 1.53e-26 109
MS.gene70634.t1 AT1G26780 46.154 117 61 1 69 185 98 212 1.55e-26 106
MS.gene70634.t1 AT5G55020 44.248 113 60 2 69 180 28 138 1.61e-26 110
MS.gene70634.t1 AT4G05100 46.018 113 60 1 61 172 7 119 1.81e-26 107
MS.gene70634.t1 AT1G26780 46.154 117 61 1 69 185 98 212 2.25e-26 107
MS.gene70634.t1 AT5G06100 44.737 114 58 3 69 180 34 144 3.50e-26 108
MS.gene70634.t1 AT5G06100 44.737 114 58 3 69 180 34 144 3.50e-26 108
MS.gene70634.t1 AT5G06100 44.737 114 58 3 69 180 34 144 3.50e-26 108
MS.gene70634.t1 AT5G06100 44.737 114 58 3 69 180 34 144 3.50e-26 108
MS.gene70634.t1 AT2G26950 43.200 125 60 3 61 180 10 128 3.91e-26 107
MS.gene70634.t1 AT4G33450 42.748 131 73 1 63 193 13 141 3.94e-26 104
MS.gene70634.t1 AT4G21440 49.020 102 51 1 69 169 14 115 4.15e-26 107
MS.gene70634.t1 AT5G40330 34.503 171 95 4 63 226 8 168 5.26e-26 103
MS.gene70634.t1 AT3G27920 45.455 99 53 1 67 164 14 112 5.95e-26 103
MS.gene70634.t1 AT5G12870 45.714 105 56 1 69 172 20 124 7.17e-26 104
MS.gene70634.t1 AT5G56110 45.455 110 59 1 63 171 8 117 8.05e-26 105
MS.gene70634.t1 AT4G22680 45.045 111 58 2 64 172 9 118 8.45e-26 104
MS.gene70634.t1 AT1G57560 44.860 107 56 2 69 173 14 119 8.91e-26 105
MS.gene70634.t1 AT1G57560 44.860 107 56 2 69 173 14 119 9.40e-26 104
MS.gene70634.t1 AT1G09540 44.860 107 56 2 69 173 14 119 1.22e-25 105
MS.gene70634.t1 AT5G07690 48.649 111 54 2 55 164 2 110 1.68e-25 105
MS.gene70634.t1 AT5G54230 38.333 180 95 6 69 237 14 188 3.07e-25 103
MS.gene70634.t1 AT3G12720 45.192 104 54 2 69 170 24 126 3.17e-25 103
MS.gene70634.t1 AT4G09460 48.039 102 52 1 69 169 14 115 3.65e-25 102
MS.gene70634.t1 AT1G66230 43.243 111 60 2 64 172 9 118 3.81e-25 102
MS.gene70634.t1 AT5G35550 45.217 115 58 3 69 181 16 127 4.14e-25 102
MS.gene70634.t1 AT5G17800 42.241 116 67 0 69 184 93 208 1.02e-24 102
MS.gene70634.t1 AT4G34990 47.222 108 55 2 69 175 14 120 1.06e-24 101
MS.gene70634.t1 AT5G61420 44.828 116 61 2 55 169 2 115 1.46e-24 102
MS.gene70634.t1 AT2G16720 47.107 121 58 4 55 172 2 119 1.60e-24 100
MS.gene70634.t1 AT1G17950 42.017 119 66 1 69 184 5 123 1.78e-24 100
MS.gene70634.t1 AT5G60890 48.148 108 54 2 69 175 14 120 1.86e-24 101
MS.gene70634.t1 AT3G61250 37.736 159 74 4 64 220 9 144 1.97e-24 101
MS.gene70634.t1 AT1G35515 41.964 112 64 1 63 173 8 119 2.00e-24 99.4
MS.gene70634.t1 AT5G07700 47.059 102 53 1 69 169 14 115 2.09e-24 102
MS.gene70634.t1 AT5G07700 47.059 102 53 1 69 169 14 115 2.09e-24 102
MS.gene70634.t1 AT3G27810 33.133 166 91 2 69 233 22 168 2.58e-24 99.4
MS.gene70634.t1 AT4G12350 43.243 111 60 2 64 172 9 118 3.86e-24 100
MS.gene70634.t1 AT5G16600 43.243 111 60 2 64 172 9 118 4.75e-24 100
MS.gene70634.t1 AT2G47190 46.078 102 54 1 69 169 22 123 4.76e-24 99.8
MS.gene70634.t1 AT3G13540 37.607 117 72 1 54 169 10 126 5.77e-24 99.0
MS.gene70634.t1 AT3G24310 45.946 111 52 3 69 177 20 124 7.33e-24 99.0
MS.gene70634.t1 AT1G63910 39.062 128 72 2 69 195 14 136 7.38e-24 100
MS.gene70634.t1 AT3G23250 41.667 108 62 1 63 169 8 115 8.02e-24 99.4
MS.gene70634.t1 AT5G16770 46.078 102 54 1 69 169 14 115 9.40e-24 100
MS.gene70634.t1 AT5G16770 46.078 102 54 1 69 169 14 115 9.40e-24 100
MS.gene70634.t1 AT5G14340 32.710 214 113 8 55 263 14 201 9.94e-24 99.0
MS.gene70634.t1 AT1G18570 42.478 113 64 1 62 173 8 120 9.96e-24 100
MS.gene70634.t1 AT5G16770 46.078 102 54 1 69 169 14 115 1.21e-23 99.8
MS.gene70634.t1 AT5G16770 46.078 102 54 1 69 169 14 115 1.21e-23 99.8
MS.gene70634.t1 AT4G13480 40.496 121 69 2 69 187 8 127 1.59e-23 98.2
MS.gene70634.t1 AT1G06180 42.982 114 60 3 63 172 8 120 1.90e-23 97.4
MS.gene70634.t1 AT5G10280 45.631 103 53 2 69 169 14 115 1.99e-23 99.4
MS.gene70634.t1 AT3G02940 45.098 102 55 1 69 169 14 115 2.70e-23 98.6
MS.gene70634.t1 AT3G08500 44.118 102 56 1 69 169 32 133 3.01e-23 99.0
MS.gene70634.t1 AT1G74080 40.602 133 77 2 69 200 14 145 3.43e-23 98.6
MS.gene70634.t1 AT4G01680 41.509 106 61 1 69 173 14 119 3.47e-23 96.7
MS.gene70634.t1 AT3G02940 45.098 102 55 1 69 169 14 115 3.70e-23 98.2
MS.gene70634.t1 AT3G02940 45.098 102 55 1 69 169 14 115 3.70e-23 98.2
MS.gene70634.t1 AT1G73410 46.729 107 54 1 69 172 6 112 4.71e-23 96.3
MS.gene70634.t1 AT5G62320 33.854 192 113 5 54 236 2 188 4.80e-23 96.3
MS.gene70634.t1 AT5G65230 45.631 103 53 2 69 169 14 115 4.82e-23 97.8
MS.gene70634.t1 AT3G13890 41.176 102 59 1 69 169 14 115 4.85e-23 98.6
MS.gene70634.t1 AT4G01680 41.509 106 61 1 69 173 14 119 5.32e-23 98.2
MS.gene70634.t1 AT1G73410 46.729 107 54 1 69 172 6 112 6.10e-23 95.1
MS.gene70634.t1 AT3G30210 44.545 110 56 2 69 177 29 134 6.12e-23 96.7
MS.gene70634.t1 AT5G40350 41.818 110 62 2 69 177 19 127 8.66e-23 94.7
MS.gene70634.t1 AT1G68320 42.157 102 58 1 69 169 21 122 8.92e-23 96.7
MS.gene70634.t1 AT3G62610 41.667 108 62 1 63 169 8 115 9.14e-23 97.4
MS.gene70634.t1 AT3G01530 44.118 102 56 1 69 169 27 128 1.00e-22 94.4
MS.gene70634.t1 AT1G25340 38.346 133 62 2 69 200 20 133 1.44e-22 95.9
MS.gene70634.t1 AT5G62470 40.909 110 65 0 63 172 8 117 1.46e-22 97.1
MS.gene70634.t1 AT4G17785 43.689 103 55 2 69 169 15 116 1.53e-22 97.1
MS.gene70634.t1 AT2G31180 39.640 111 66 1 63 172 8 118 1.71e-22 95.1
MS.gene70634.t1 AT4G17785 43.689 103 55 2 69 169 15 116 1.81e-22 97.1
MS.gene70634.t1 AT3G60460 44.348 115 60 3 56 168 2 114 1.99e-22 95.9
MS.gene70634.t1 AT3G13890 39.640 111 57 1 69 169 14 124 2.25e-22 96.7
MS.gene70634.t1 AT5G15310 41.818 110 63 1 64 172 9 118 2.45e-22 95.9
MS.gene70634.t1 AT5G15310 41.818 110 63 1 64 172 9 118 2.64e-22 94.4
MS.gene70634.t1 AT5G15310 41.818 110 63 1 64 172 9 118 2.64e-22 95.9
MS.gene70634.t1 AT5G59780 40.367 109 64 1 67 174 8 116 3.52e-22 94.0
MS.gene70634.t1 AT1G66370 40.870 115 59 2 69 178 10 120 4.52e-22 93.6
MS.gene70634.t1 AT1G18710 42.593 108 60 2 69 175 14 120 4.99e-22 94.0
MS.gene70634.t1 AT5G26660 36.364 132 81 2 102 233 17 145 5.35e-22 95.1
MS.gene70634.t1 AT1G25340 37.879 132 59 2 69 200 20 128 5.42e-22 94.4
MS.gene70634.t1 AT1G48000 44.444 99 54 1 65 162 30 128 6.20e-22 93.2
MS.gene70634.t1 AT3G46130 42.593 108 59 2 69 174 11 117 7.02e-22 93.6
MS.gene70634.t1 AT1G56160 39.831 118 66 3 56 171 5 119 8.37e-22 94.0
MS.gene70634.t1 AT5G52600 41.121 107 62 1 69 174 14 120 8.58e-22 92.0
MS.gene70634.t1 AT3G01140 41.818 110 63 1 64 172 9 118 9.21e-22 94.7
MS.gene70634.t1 AT1G25340 37.879 132 59 2 69 200 20 128 9.56e-22 94.0
MS.gene70634.t1 AT3G53200 42.623 122 63 3 62 181 4 120 1.01e-21 92.4
MS.gene70634.t1 AT3G01140 41.818 110 63 1 64 172 52 161 1.04e-21 95.1
MS.gene70634.t1 AT4G01680 38.983 118 59 2 69 173 14 131 1.47e-21 94.4
MS.gene70634.t1 AT1G08810 42.727 110 62 1 64 172 9 118 1.71e-21 92.8
MS.gene70634.t1 AT2G47460 39.815 108 64 1 63 169 8 115 1.84e-21 94.4
MS.gene70634.t1 AT1G34670 43.137 102 57 1 69 169 14 115 3.24e-21 93.6
MS.gene70634.t1 AT3G47600 40.909 110 64 1 64 172 9 118 3.28e-21 93.2
MS.gene70634.t1 AT3G48920 43.564 101 56 1 69 168 20 120 3.46e-21 91.7
MS.gene70634.t1 AT5G39700 35.802 162 96 3 14 175 9 162 4.06e-21 89.7
MS.gene70634.t1 AT5G62470 40.541 111 65 1 63 172 8 118 5.31e-21 92.8
MS.gene70634.t1 AT1G16490 39.450 109 65 1 64 171 11 119 5.68e-21 91.3
MS.gene70634.t1 AT1G79180 37.288 118 73 1 64 180 11 128 7.73e-21 91.3
MS.gene70634.t1 AT1G66380 47.525 101 44 2 69 164 10 106 9.24e-21 87.4
MS.gene70634.t1 AT4G37780 37.838 111 67 2 69 177 14 124 9.45e-21 91.3
MS.gene70634.t1 AT4G25560 39.815 108 64 1 69 175 12 119 9.90e-21 90.9
MS.gene70634.t1 AT5G49330 39.815 108 64 1 63 169 8 115 1.41e-20 91.3
MS.gene70634.t1 AT3G28910 41.905 105 60 1 69 172 14 118 1.61e-20 90.9
MS.gene70634.t1 AT1G74650 40.741 108 63 1 63 169 8 115 1.90e-20 90.9
MS.gene70634.t1 AT5G49620 39.130 115 68 2 60 173 19 132 3.59e-20 89.7
MS.gene70634.t1 AT5G65790 39.062 128 75 3 64 189 9 135 5.48e-20 90.1
MS.gene70634.t1 AT5G57620 40.708 113 65 2 64 174 9 121 9.16e-20 89.0
MS.gene70634.t1 AT5G35550 48.750 80 39 1 102 181 53 130 1.32e-19 87.4
MS.gene70634.t1 AT5G14750 39.326 89 52 1 99 185 13 101 1.88e-19 84.7
MS.gene70634.t1 AT1G14350 40.860 93 55 0 72 164 28 120 4.44e-19 88.2
MS.gene70634.t1 AT1G14350 40.860 93 55 0 72 164 28 120 4.44e-19 88.2
MS.gene70634.t1 AT1G56650 46.535 101 45 2 69 164 10 106 4.54e-19 85.5
MS.gene70634.t1 AT3G49690 41.667 108 61 2 64 169 9 116 5.58e-19 86.3
MS.gene70634.t1 AT3G12820 39.252 107 62 2 69 173 16 121 7.55e-19 84.7
MS.gene70634.t1 AT5G52260 42.453 106 58 2 69 172 14 118 9.97e-19 85.1
MS.gene70634.t1 AT2G02820 40.659 91 54 0 72 162 33 123 2.61e-18 84.7
MS.gene70634.t1 AT5G23000 41.026 117 63 3 56 169 3 116 2.70e-18 84.7
MS.gene70634.t1 AT2G02820 39.785 93 56 0 72 164 33 125 4.01e-18 85.5
MS.gene70634.t1 AT2G02820 39.785 93 56 0 72 164 33 125 5.02e-18 85.1
MS.gene70634.t1 AT3G06490 37.273 110 66 2 55 162 7 115 1.29e-17 82.8
MS.gene70634.t1 AT1G66390 42.991 107 52 2 69 170 10 112 1.39e-17 81.3
MS.gene70634.t1 AT1G79180 44.304 79 44 0 102 180 83 161 1.76e-17 82.4
MS.gene70634.t1 AT3G27810 32.576 132 70 1 102 233 7 119 4.00e-17 78.6
MS.gene70634.t1 AT5G49620 34.884 129 68 3 60 173 19 146 8.44e-17 80.5
MS.gene70634.t1 AT3G53200 47.500 80 38 1 102 181 12 87 9.60e-17 78.2
MS.gene70634.t1 AT2G36890 38.889 108 64 2 64 169 9 116 1.09e-16 79.7
MS.gene70634.t1 AT2G36890 38.889 108 64 2 64 169 50 157 1.33e-16 80.1
MS.gene70634.t1 AT3G12820 45.833 72 39 0 102 173 2 73 2.05e-16 77.0
MS.gene70634.t1 AT2G37630 42.056 107 59 2 71 174 6 112 2.20e-16 79.7
MS.gene70634.t1 AT3G18100 40.426 94 56 0 69 162 546 639 4.18e-16 79.7
MS.gene70634.t1 AT3G18100 29.032 155 102 4 9 162 441 588 4.92e-13 70.5
MS.gene70634.t1 AT3G18100 40.426 94 56 0 69 162 498 591 4.82e-16 79.7
MS.gene70634.t1 AT3G18100 29.032 155 102 4 9 162 393 540 4.28e-13 70.9
MS.gene70634.t1 AT3G18100 40.426 94 56 0 69 162 385 478 6.63e-16 79.0
MS.gene70634.t1 AT3G18100 29.032 155 102 4 9 162 280 427 8.23e-13 69.7
MS.gene70634.t1 AT3G18100 40.426 94 56 0 69 162 333 426 6.72e-16 79.0
MS.gene70634.t1 AT3G18100 29.032 155 102 4 9 162 228 375 8.29e-13 69.7
MS.gene70634.t1 AT5G40350 44.737 76 41 1 102 177 8 82 1.24e-15 73.9
MS.gene70634.t1 AT1G22640 52.459 61 29 0 113 173 2 62 2.15e-15 74.3
MS.gene70634.t1 AT5G59780 41.096 73 43 0 102 174 23 95 2.16e-15 74.3
MS.gene70634.t1 AT3G46130 41.096 73 43 0 102 174 23 95 6.42e-15 73.6
MS.gene70634.t1 AT3G46130 41.096 73 43 0 102 174 13 85 6.73e-15 73.2
MS.gene70634.t1 AT1G71030 41.176 68 40 0 105 172 5 72 2.90e-14 70.5
MS.gene70634.t1 AT1G71030 41.176 68 40 0 105 172 19 86 3.14e-14 70.9
MS.gene70634.t1 AT3G47600 36.842 95 49 1 78 172 29 112 4.71e-14 72.4
MS.gene70634.t1 AT5G14750 35.616 73 47 0 113 185 2 74 6.60e-14 68.6
MS.gene70634.t1 AT5G14750 35.616 73 47 0 113 185 2 74 6.60e-14 68.6
MS.gene70634.t1 AT1G66380 50.794 63 31 0 102 164 11 73 3.43e-13 65.5
MS.gene70634.t1 AT3G23250 45.614 57 31 0 113 169 2 58 1.06e-11 64.3

Find 56 sgRNAs with CRISPR-Local

Find 92 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTAAATGGAAAATAATTT+TGG 0.166549 3.1:-63838781 None:intergenic
AAGAAGATCAACTTTATAAA+AGG 0.205425 3.1:+63838947 MS.gene70634:CDS
GTTTCTTGAGAAATATTAAA+TGG 0.212262 3.1:-63838794 None:intergenic
GATGAGAATTTGTTTCAAAA+TGG 0.230233 3.1:+63840144 MS.gene70634:CDS
CTTTGATCTACCCTTTCTTT+TGG 0.231362 3.1:-63839899 None:intergenic
AGAAATGCCACTAGATATTA+TGG 0.284041 3.1:+63840254 MS.gene70634:CDS
TCATCTAAAGCCTGACATTA+AGG 0.317779 3.1:+63839258 MS.gene70634:CDS
GAGAACATGGTTTGAGAAAA+TGG 0.322172 3.1:+63839173 MS.gene70634:CDS
TAAGAAGGAGATGGATTTGA+TGG 0.326017 3.1:+63840299 MS.gene70634:CDS
TTTGTAGAAGAGTTCCTTTA+GGG 0.335398 3.1:-63839924 None:intergenic
TGGCATGAACAGAAATAATA+AGG 0.340684 3.1:+63838886 MS.gene70634:CDS
TGCTGAAGCTGATCAAATTA+TGG 0.373684 3.1:+63840203 MS.gene70634:CDS
TTCTCTTTGTTGCATTCCAA+TGG 0.381694 3.1:-63839867 None:intergenic
GGTACCAAACACTGATCATT+AGG 0.389697 3.1:-63840084 None:intergenic
ATGAGAATTTGTTTCAAAAT+GGG 0.396459 3.1:+63840145 MS.gene70634:CDS
AAACAGGTTGTTGGTTCAGC+TGG 0.412723 3.1:+63839147 MS.gene70634:intron
GAGAATTTGCCTGGTAGAAT+AGG 0.417263 3.1:+63839208 MS.gene70634:CDS
AATGGGCGGAGATAGCTAAA+AGG 0.422785 3.1:+63839812 MS.gene70634:CDS
TCAGGCTTTCTAGAGGCATA+AGG 0.428609 3.1:-63838914 None:intergenic
ATGAAGAGATAGGAAACAAA+TGG 0.432519 3.1:+63839794 MS.gene70634:CDS
GTTCAGCTGGTTGGAGAACA+TGG 0.436361 3.1:+63839160 MS.gene70634:CDS
GGAGATGGATTTGATGGAGA+TGG 0.438443 3.1:+63840305 MS.gene70634:CDS
GAATAATCAAATGGAAATGA+TGG 0.445628 3.1:+63838751 None:intergenic
CCTTATTGCAGAAGGACATA+TGG 0.449990 3.1:+63839737 MS.gene70634:intron
AAGACAATACTCCAAAAGAA+AGG 0.464183 3.1:+63839888 MS.gene70634:CDS
TAAGAATTCACCTTAATGTC+AGG 0.466977 3.1:-63839268 None:intergenic
AGAAGATCAACTTTATAAAA+GGG 0.467069 3.1:+63838948 MS.gene70634:CDS
GGACATATGGAGTGAGGAAG+AGG 0.467712 3.1:+63839750 MS.gene70634:CDS
CATATTGCTGAGAATTTGCC+TGG 0.468585 3.1:+63839199 MS.gene70634:CDS
ATCAAAGCACATGAAGAGAT+AGG 0.469111 3.1:+63839784 MS.gene70634:CDS
GTGAATTATTACAAAAGAGT+TGG 0.476372 3.1:+63838866 MS.gene70634:CDS
TACAACACTATTCAAAGGCT+TGG 0.480870 3.1:-63838816 None:intergenic
GATATGCATGAGACTTCATC+TGG 0.491162 3.1:-63838839 None:intergenic
GCTTGGAGTTGAAGTTAAGA+AGG 0.493540 3.1:+63840284 MS.gene70634:CDS
AGTTGAAGTTAAGAAGGAGA+TGG 0.502240 3.1:+63840290 MS.gene70634:CDS
GATATTATGGAATCTATGCT+TGG 0.512953 3.1:+63840267 MS.gene70634:CDS
TTTGGTAATGACATCAACAT+TGG 0.526123 3.1:+63840366 MS.gene70634:CDS
TTTCTTCTATAATCTTTCGG+AGG 0.530747 3.1:-63839979 None:intergenic
GGTAGATCAAAGTACCCTAA+AGG 0.542452 3.1:+63839910 MS.gene70634:CDS
AGGTTGTTGGTTCAGCTGGT+TGG 0.546665 3.1:+63839151 MS.gene70634:intron
AGACAATACTCCAAAAGAAA+GGG 0.551275 3.1:+63839889 MS.gene70634:CDS
TGAAGAGATAGGAAACAAAT+GGG 0.553849 3.1:+63839795 MS.gene70634:CDS
TCTGGTACAACACTATTCAA+AGG 0.554355 3.1:-63838821 None:intergenic
TTCTTCTATAATCTTTCGGA+GGG 0.559200 3.1:-63839978 None:intergenic
AACTTTCTCAGGCTTTCTAG+AGG 0.574016 3.1:-63838921 None:intergenic
GAGATAGCTAAAAGGTTACC+AGG 0.574186 3.1:+63839820 MS.gene70634:CDS
TTCAGTTTGTTGAGACTGAG+AGG 0.582327 3.1:-63840052 None:intergenic
GGATAATGTTGTGCATCTGT+TGG 0.585302 3.1:-63840031 None:intergenic
GAAGCTGATCAAATTATGGA+AGG 0.586708 3.1:+63840207 MS.gene70634:CDS
ACATCATCAAAATCACAAGT+TGG 0.586726 3.1:-63840105 None:intergenic
TCAACTTTATAAAAGGGCAA+TGG 0.588167 3.1:+63838954 MS.gene70634:CDS
GAAAACAATGCAGAGAGAGA+TGG 0.604304 3.1:+63839230 MS.gene70634:CDS
AATGGACAGTAGAAGAAGAT+CGG 0.617069 3.1:+63838972 MS.gene70634:CDS
ATAGATTCCATAATATCTAG+TGG 0.637129 3.1:-63840261 None:intergenic
GCAGAAGGACATATGGAGTG+AGG 0.656245 3.1:+63839744 MS.gene70634:intron
AGAGATAGGAAACAAATGGG+CGG 0.736615 3.1:+63839798 MS.gene70634:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTAAATGGAAAATAATTT+TGG - chr3.1:63838784-63838803 None:intergenic 10.0%
!!! AAAAAAAAAGTACCTATAAA+AGG - chr3.1:63839074-63839093 None:intergenic 15.0%
!!! AAAAAGTACAAATAATAATG+TGG + chr3.1:63839470-63839489 MS.gene70634:intron 15.0%
!! AAGAAGATCAACTTTATAAA+AGG + chr3.1:63838947-63838966 MS.gene70634:CDS 20.0%
!! AGAAGATCAACTTTATAAAA+GGG + chr3.1:63838948-63838967 MS.gene70634:CDS 20.0%
!! GTTTCTTGAGAAATATTAAA+TGG - chr3.1:63838797-63838816 None:intergenic 20.0%
!! TTTAGATCAAAATTCCAAAT+TGG - chr3.1:63839098-63839117 None:intergenic 20.0%
!!! ATGAGAATTTGTTTCAAAAT+GGG + chr3.1:63840145-63840164 MS.gene70634:CDS 20.0%
!!! GTACTTTTTTTTTACCAATT+TGG + chr3.1:63839081-63839100 MS.gene70634:intron 20.0%
!!! TTTGGAATTTTGATCTAAAA+AGG + chr3.1:63839099-63839118 MS.gene70634:intron 20.0%
! AAAACTCAATCAAAAACCAT+TGG + chr3.1:63839851-63839870 MS.gene70634:CDS 25.0%
! ATAGATTCCATAATATCTAG+TGG - chr3.1:63840264-63840283 None:intergenic 25.0%
! GTGAATTATTACAAAAGAGT+TGG + chr3.1:63838866-63838885 MS.gene70634:CDS 25.0%
! TAATAAATCTTCGTTGAAGT+TGG + chr3.1:63839397-63839416 MS.gene70634:intron 25.0%
! TGTTTGCAATAAGATGTTTA+AGG + chr3.1:63839510-63839529 MS.gene70634:intron 25.0%
!! GATGAGAATTTGTTTCAAAA+TGG + chr3.1:63840144-63840163 MS.gene70634:CDS 25.0%
!! GGTTTTCTTCTATAATCTTT+CGG - chr3.1:63839985-63840004 None:intergenic 25.0%
!! TCTTTTGTAATAATTCACTG+AGG - chr3.1:63838864-63838883 None:intergenic 25.0%
!!! ATCTTCTTTTTAACTTTCTC+AGG - chr3.1:63838935-63838954 None:intergenic 25.0%
!!! TACTTCACATTTCTTGTTTT+TGG + chr3.1:63839539-63839558 MS.gene70634:intron 25.0%
AAGACAATACTCCAAAAGAA+AGG + chr3.1:63839888-63839907 MS.gene70634:CDS 30.0%
ACATCATCAAAATCACAAGT+TGG - chr3.1:63840108-63840127 None:intergenic 30.0%
ACTTCTTTATAGTCTATCGA+AGG - chr3.1:63839373-63839392 None:intergenic 30.0%
AGAAATGCCACTAGATATTA+TGG + chr3.1:63840254-63840273 MS.gene70634:CDS 30.0%
AGACAATACTCCAAAAGAAA+GGG + chr3.1:63839889-63839908 MS.gene70634:CDS 30.0%
AGATGAGACATACATTTGTT+AGG - chr3.1:63839431-63839450 None:intergenic 30.0%
ATGAAGAGATAGGAAACAAA+TGG + chr3.1:63839794-63839813 MS.gene70634:CDS 30.0%
CTTCTTTATAGTCTATCGAA+GGG - chr3.1:63839372-63839391 None:intergenic 30.0%
GATATTATGGAATCTATGCT+TGG + chr3.1:63840267-63840286 MS.gene70634:CDS 30.0%
TAAGAATTCACCTTAATGTC+AGG - chr3.1:63839271-63839290 None:intergenic 30.0%
TATTGCAAACACATGTGTAT+CGG - chr3.1:63839501-63839520 None:intergenic 30.0%
TCAACTTTATAAAAGGGCAA+TGG + chr3.1:63838954-63838973 MS.gene70634:CDS 30.0%
TGAAGAGATAGGAAACAAAT+GGG + chr3.1:63839795-63839814 MS.gene70634:CDS 30.0%
TGGCATGAACAGAAATAATA+AGG + chr3.1:63838886-63838905 MS.gene70634:CDS 30.0%
TTCTCATCGAAAGAAAAATC+CGG - chr3.1:63840132-63840151 None:intergenic 30.0%
TTCTTCTATAATCTTTCGGA+GGG - chr3.1:63839981-63840000 None:intergenic 30.0%
TTTCTTCTATAATCTTTCGG+AGG - chr3.1:63839982-63840001 None:intergenic 30.0%
TTTGTAGAAGAGTTCCTTTA+GGG - chr3.1:63839927-63839946 None:intergenic 30.0%
! GATGAGACATACATTTGTTA+GGG - chr3.1:63839430-63839449 None:intergenic 30.0%
! TGCAATAAGATGTTTAAGGT+AGG + chr3.1:63839514-63839533 MS.gene70634:intron 30.0%
! TTTTCCTAATGATCAGTGTT+TGG + chr3.1:63840080-63840099 MS.gene70634:CDS 30.0%
! TTTTGTAGAAGAGTTCCTTT+AGG - chr3.1:63839928-63839947 None:intergenic 30.0%
! TTTTTCATAGCATTAGCTGA+AGG - chr3.1:63840006-63840025 None:intergenic 30.0%
!! GTGACTGTTTTTCCTTTTAT+AGG + chr3.1:63839059-63839078 MS.gene70634:intron 30.0%
!! TTTGGTAATGACATCAACAT+TGG + chr3.1:63840366-63840385 MS.gene70634:CDS 30.0%
!!! TTTTCAGGTGACTCATATTT+TGG + chr3.1:63840348-63840367 MS.gene70634:CDS 30.0%
AATGGACAGTAGAAGAAGAT+CGG + chr3.1:63838972-63838991 MS.gene70634:CDS 35.0%
AGTTGAAGTTAAGAAGGAGA+TGG + chr3.1:63840290-63840309 MS.gene70634:CDS 35.0%
ATATGTGTGCATGCAAAAAC+AGG + chr3.1:63839131-63839150 MS.gene70634:intron 35.0%
ATCAAAGCACATGAAGAGAT+AGG + chr3.1:63839784-63839803 MS.gene70634:CDS 35.0%
GAAGCTGATCAAATTATGGA+AGG + chr3.1:63840207-63840226 MS.gene70634:CDS 35.0%
GAGAACATGGTTTGAGAAAA+TGG + chr3.1:63839173-63839192 MS.gene70634:CDS 35.0%
TAAATCTTCGTTGAAGTTGG+TGG + chr3.1:63839400-63839419 MS.gene70634:intron 35.0%
TACAACACTATTCAAAGGCT+TGG - chr3.1:63838819-63838838 None:intergenic 35.0%
TCTCATCGAAAGAAAAATCC+GGG - chr3.1:63840131-63840150 None:intergenic 35.0%
TCTGGTACAACACTATTCAA+AGG - chr3.1:63838824-63838843 None:intergenic 35.0%
TGCTGAAGCTGATCAAATTA+TGG + chr3.1:63840203-63840222 MS.gene70634:CDS 35.0%
TTCTCTTTGTTGCATTCCAA+TGG - chr3.1:63839870-63839889 None:intergenic 35.0%
! ATTGAGTTTTCAGTTCTTCC+TGG - chr3.1:63839841-63839860 None:intergenic 35.0%
! CATTGTTTTCCTATTCTACC+AGG - chr3.1:63839220-63839239 None:intergenic 35.0%
! CTTTGATCTACCCTTTCTTT+TGG - chr3.1:63839902-63839921 None:intergenic 35.0%
! TAAGAAGGAGATGGATTTGA+TGG + chr3.1:63840299-63840318 MS.gene70634:CDS 35.0%
! TCAGGTCAACGAAAATTTTC+AGG + chr3.1:63840333-63840352 MS.gene70634:CDS 35.0%
! TCATCTAAAGCCTGACATTA+AGG + chr3.1:63839258-63839277 MS.gene70634:CDS 35.0%
!!! TTGATGGAGATGGTTTTTTC+AGG + chr3.1:63840315-63840334 MS.gene70634:CDS 35.0%
!!! TTGTGATTTTGATGATGTCC+CGG + chr3.1:63840110-63840129 MS.gene70634:CDS 35.0%
AACTTTCTCAGGCTTTCTAG+AGG - chr3.1:63838924-63838943 None:intergenic 40.0%
AGAGATAGGAAACAAATGGG+CGG + chr3.1:63839798-63839817 MS.gene70634:CDS 40.0%
CATATTGCTGAGAATTTGCC+TGG + chr3.1:63839199-63839218 MS.gene70634:CDS 40.0%
CCATATGTCCTTCTGCAATA+AGG - chr3.1:63839740-63839759 None:intergenic 40.0%
CCTTATTGCAGAAGGACATA+TGG + chr3.1:63839737-63839756 MS.gene70634:intron 40.0%
GAAAACAATGCAGAGAGAGA+TGG + chr3.1:63839230-63839249 MS.gene70634:CDS 40.0%
GAGAATTTGCCTGGTAGAAT+AGG + chr3.1:63839208-63839227 MS.gene70634:CDS 40.0%
GAGATAGCTAAAAGGTTACC+AGG + chr3.1:63839820-63839839 MS.gene70634:CDS 40.0%
GATATGCATGAGACTTCATC+TGG - chr3.1:63838842-63838861 None:intergenic 40.0%
GCTTGGAGTTGAAGTTAAGA+AGG + chr3.1:63840284-63840303 MS.gene70634:CDS 40.0%
GGATAATGTTGTGCATCTGT+TGG - chr3.1:63840034-63840053 None:intergenic 40.0%
GGTACCAAACACTGATCATT+AGG - chr3.1:63840087-63840106 None:intergenic 40.0%
TGCATGCAAAAACAGGTTGT+TGG + chr3.1:63839138-63839157 MS.gene70634:intron 40.0%
! ATGTTGTGCCTTATTGCAGA+AGG + chr3.1:63839729-63839748 MS.gene70634:intron 40.0%
! GGTAGATCAAAGTACCCTAA+AGG + chr3.1:63839910-63839929 MS.gene70634:CDS 40.0%
!! TAGCACATTAGCACTGACTT+AGG + chr3.1:63839329-63839348 MS.gene70634:intron 40.0%
!! TTCAGTTTGTTGAGACTGAG+AGG - chr3.1:63840055-63840074 None:intergenic 40.0%
AATGGGCGGAGATAGCTAAA+AGG + chr3.1:63839812-63839831 MS.gene70634:CDS 45.0%
! GGAGATGGATTTGATGGAGA+TGG + chr3.1:63840305-63840324 MS.gene70634:CDS 45.0%
! TCAGGCTTTCTAGAGGCATA+AGG - chr3.1:63838917-63838936 None:intergenic 45.0%
!! AAACAGGTTGTTGGTTCAGC+TGG + chr3.1:63839147-63839166 MS.gene70634:intron 45.0%
GCAGAAGGACATATGGAGTG+AGG + chr3.1:63839744-63839763 MS.gene70634:intron 50.0%
GGACATATGGAGTGAGGAAG+AGG + chr3.1:63839750-63839769 MS.gene70634:CDS 50.0%
GTTCAGCTGGTTGGAGAACA+TGG + chr3.1:63839160-63839179 MS.gene70634:CDS 50.0%
! CTTTCGGAGGGTTTTCGTCT+AGG - chr3.1:63839969-63839988 None:intergenic 50.0%
!! AGGTTGTTGGTTCAGCTGGT+TGG + chr3.1:63839151-63839170 MS.gene70634:intron 50.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 63838761 63840395 63838761 ID=MS.gene70634
chr3.1 mRNA 63838761 63840395 63838761 ID=MS.gene70634.t1;Parent=MS.gene70634
chr3.1 exon 63838761 63838993 63838761 ID=MS.gene70634.t1.exon1;Parent=MS.gene70634.t1
chr3.1 CDS 63838761 63838993 63838761 ID=cds.MS.gene70634.t1;Parent=MS.gene70634.t1
chr3.1 exon 63839153 63839279 63839153 ID=MS.gene70634.t1.exon2;Parent=MS.gene70634.t1
chr3.1 CDS 63839153 63839279 63839153 ID=cds.MS.gene70634.t1;Parent=MS.gene70634.t1
chr3.1 exon 63839748 63840395 63839748 ID=MS.gene70634.t1.exon3;Parent=MS.gene70634.t1
chr3.1 CDS 63839748 63840395 63839748 ID=cds.MS.gene70634.t1;Parent=MS.gene70634.t1
Gene Sequence

>MS.gene70634

ATGGAAATGATGGTTACAAACCAAAATTATTTTCCATTTAATATTTCTCAAGAAACCAAGCCTTTGAATAGTGTTGTACCAGATGAAGTCTCATGCATATCCTCAGTGAATTATTACAAAAGAGTTGGCATGAACAGAAATAATAAGGCATATCCTTATGCCTCTAGAAAGCCTGAGAAAGTTAAAAAGAAGATCAACTTTATAAAAGGGCAATGGACAGTAGAAGAAGATCGGTACATACATAAAAACATGAAACATTTTTTTTTCTTACTATTATTTATCAGTTACTTTTTAATTTGTGACTGTTTTTCCTTTTATAGGTACTTTTTTTTTACCAATTTGGAATTTTGATCTAAAAAGGTTATGATGTATATGTGTGCATGCAAAAACAGGTTGTTGGTTCAGCTGGTTGGAGAACATGGTTTGAGAAAATGGTCTCATATTGCTGAGAATTTGCCTGGTAGAATAGGAAAACAATGCAGAGAGAGATGGCATAATCATCTAAAGCCTGACATTAAGGTGAATTCTTATTTACTATATTATATACATATACTTTTATCACTTAGCTTAGCACATTAGCACTGACTTAGGTTCAAATTTGACATTCTCCCTTCGATAGACTATAAAGAAGTTATATAATAAATCTTCGTTGAAGTTGGTGGTTTTCCCTAACAAATGTATGTCTCATCTAATCTAAATTTTTATCGATAAAAAGTACAAATAATAATGTGGAAATACCGATACACATGTGTTTGCAATAAGATGTTTAAGGTAGGTTTACTTCACATTTCTTGTTTTTGGTTTTTATTTTCAAATCAACTAATAAACATTATACGATATAGATTTAAAATTGAACTCGCTATTTTCTTTTACATTTTGTTCACTATTTGAGTCTTTCATCGCTTCTTAACAATTTAAAACGAATACAAATTTTAGATATCGAAACTAAAAAATATTTTTTTCAATTCATGTTGTGCCTTATTGCAGAAGGACATATGGAGTGAGGAAGAGGACAACATATTGATCAAAGCACATGAAGAGATAGGAAACAAATGGGCGGAGATAGCTAAAAGGTTACCAGGAAGAACTGAAAACTCAATCAAAAACCATTGGAATGCAACAAAGAGAAGACAATACTCCAAAAGAAAGGGTAGATCAAAGTACCCTAAAGGAACTCTTCTACAAAAATATATCAAGAGCTTAAACCTAGACGAAAACCCTCCGAAAGATTATAGAAGAAAACCTTCAGCTAATGCTATGAAAAACAAAACCAACAGATGCACAACATTATCCTCTCAGTCTCAACAAACTGAACAATTTTTTCCTAATGATCAGTGTTTGGTACCAACTTGTGATTTTGATGATGTCCCGGATTTTTCTTTCGATGAGAATTTGTTTCAAAATGGGTGTAGCATTGATTCTCTACTAGATGATATGCAATGTGCTGAAGCTGATCAAATTATGGAAGGAAAAAAACATTTTGATGTTGAGACAGAAATGCCACTAGATATTATGGAATCTATGCTTGGAGTTGAAGTTAAGAAGGAGATGGATTTGATGGAGATGGTTTTTTCAGGTCAACGAAAATTTTCAGGTGACTCATATTTTGGTAATGACATCAACATTGGTTTGTGA
Protein sequence

>MS.gene70634.t1

MEMMVTNQNYFPFNISQETKPLNSVVPDEVSCISSVNYYKRVGMNRNNKAYPYASRKPEKVKKKINFIKGQWTVEEDRLLVQLVGEHGLRKWSHIAENLPGRIGKQCRERWHNHLKPDIKKDIWSEEEDNILIKAHEEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQYSKRKGRSKYPKGTLLQKYIKSLNLDENPPKDYRRKPSANAMKNKTNRCTTLSSQSQQTEQFFPNDQCLVPTCDFDDVPDFSFDENLFQNGCSIDSLLDDMQCAEADQIMEGKKHFDVETEMPLDIMESMLGVEVKKEMDLMEMVFSGQRKFSGDSYFGNDINIGL