AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene70802

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70802.t1 MTR_1g081560 91.755 376 30 1 1 376 1 375 0.0 634
MS.gene70802.t1 MTR_1g081580 32.249 338 171 10 81 372 45 370 8.11e-41 148
MS.gene70802.t1 MTR_7g114600 44.444 171 76 7 72 229 42 206 1.60e-28 115
MS.gene70802.t1 MTR_7g114600 38.793 116 48 5 277 373 323 434 3.10e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70802.t1 AT5G28040 35.393 356 150 16 93 373 72 422 6.83e-44 157
MS.gene70802.t1 AT5G28040 35.393 356 150 16 93 373 72 422 6.83e-44 157
MS.gene70802.t1 AT3G04930 32.817 323 137 9 127 373 133 451 1.79e-34 132
MS.gene70802.t1 AT3G04930 47.581 124 51 5 127 240 133 252 1.30e-26 110
MS.gene70802.t1 AT1G11510 35.606 132 69 4 108 229 105 230 3.47e-13 70.5
MS.gene70802.t1 AT1G11510 39.394 99 53 2 132 229 109 201 4.74e-13 69.7

Find 92 sgRNAs with CRISPR-Local

Find 105 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGAATTCCACGCTGAATT+TGG 0.173148 1.2:-61020891 None:intergenic
TGCTTTCACCATTGGTTTCT+TGG 0.184831 1.2:+61020369 MS.gene70802:CDS
TCGAAATTTCCCACAAGATT+TGG 0.203495 1.2:+61021026 MS.gene70802:CDS
CGAAATTTCCCACAAGATTT+GGG 0.213735 1.2:+61021027 MS.gene70802:CDS
CTTGTGGGAAATTTCGAAAA+TGG 0.256771 1.2:-61021020 None:intergenic
AGAAGTTACGTAGGTTAAAA+AGG 0.283260 1.2:+61020930 MS.gene70802:CDS
TCAATAAGATCAGGACTTTC+AGG 0.284560 1.2:-61021100 None:intergenic
ACCATTGTTGAAGGAACTAT+TGG 0.296222 1.2:+61021297 MS.gene70802:CDS
TGAACTGTTGAAGGGATATC+TGG 0.305389 1.2:+61020793 MS.gene70802:CDS
ATGGTTAAAACGGAGGATTT+TGG 0.338805 1.2:+61021390 MS.gene70802:CDS
TGACACCGACCATGACGTTT+TGG 0.344618 1.2:+61021054 MS.gene70802:CDS
TGGTCTTCATCCACATTGTA+TGG 0.361996 1.2:-61020554 None:intergenic
GCCATGGCCACCGTCACAAC+GGG 0.369780 1.2:-61020620 None:intergenic
GACGCACTGGGTGGCTCTAC+TGG 0.372415 1.2:-61021328 None:intergenic
CTCAACAATGCTTTCACCAT+TGG 0.374554 1.2:+61020361 None:intergenic
TATCATCCACATTGTCCATT+TGG 0.374861 1.2:-61020508 None:intergenic
CATTGTATGGACATAGAAAA+TGG 0.389529 1.2:-61020541 None:intergenic
TGGTGAGAAACAAGACTTCA+TGG 0.394662 1.2:-61021278 None:intergenic
GCCGTGTTTGTGTCATCTGC+GGG 0.417687 1.2:-61020647 None:intergenic
TAGTAGCATTGCCATTGTTC+CGG 0.431642 1.2:-61021231 None:intergenic
TGAGGGATCTTGAAAGAAAT+CGG 0.433564 1.2:-61020989 None:intergenic
TTGTTTCTCACCATTGTTGA+AGG 0.439029 1.2:+61021288 MS.gene70802:CDS
TAACAACATCGGCGACGCAC+TGG 0.453222 1.2:-61021341 None:intergenic
AGATCAGGACTTTCAGGAAC+AGG 0.454735 1.2:-61021094 None:intergenic
CAATGGGAATGTTGTCCATT+TGG 0.457011 1.2:-61020574 None:intergenic
CCCCGTTGTGACGGTGGCCA+TGG 0.457760 1.2:+61020619 MS.gene70802:CDS
TCGCCGATGTTGTTATCGAC+AGG 0.458917 1.2:+61021349 MS.gene70802:CDS
TGACAATGTTGAAGACCAAA+TGG 0.469140 1.2:+61020493 MS.gene70802:CDS
AATTCAGCGTGGAATTCAAC+AGG 0.472407 1.2:+61020894 MS.gene70802:CDS
TATTGACAATGTTAAGATGA+AGG 0.472539 1.2:+61021117 MS.gene70802:CDS
AGTGGTAGTAGCCGCGGTGG+TGG 0.484827 1.2:-61020681 None:intergenic
TCAGAAACGGCAAGTGCAAT+GGG 0.486716 1.2:-61020590 None:intergenic
GGACGAGATTGAACTGTTGA+AGG 0.488252 1.2:+61020784 MS.gene70802:CDS
AAGGAAACACAAGATGACTT+TGG 0.497734 1.2:+61020949 MS.gene70802:CDS
CAATGTGGATGAAGACCAAA+TGG 0.497943 1.2:+61020559 MS.gene70802:CDS
ATCAGAAACGGCAAGTGCAA+TGG 0.502613 1.2:-61020591 None:intergenic
TTAAACAATATCAGAGGCTA+TGG 0.508336 1.2:+61020753 MS.gene70802:CDS
TCAGATCAAGGCTAGGTTGG+AGG 0.516669 1.2:+61021453 MS.gene70802:CDS
TCGAAAATGGCTTGTTCCTG+AGG 0.518443 1.2:-61021007 None:intergenic
TTAACATTGTCAATAAGATC+AGG 0.519347 1.2:-61021109 None:intergenic
GGAGGTGTATTTGAATCGGT+TGG 0.520311 1.2:+61021417 MS.gene70802:CDS
GTCATTGCCCCAAATCTTGT+GGG 0.523632 1.2:-61021035 None:intergenic
AACTGGAGGTGTATTTGAAT+CGG 0.526700 1.2:+61021413 MS.gene70802:CDS
CGAAAATGGCTTGTTCCTGA+GGG 0.533678 1.2:-61021006 None:intergenic
CAATGTGGATGATAACGAAA+AGG 0.535070 1.2:+61020517 MS.gene70802:CDS
GATTTCTTTCAAGATCCCTC+AGG 0.542535 1.2:+61020991 MS.gene70802:CDS
TGTCATTGCCCCAAATCTTG+TGG 0.546121 1.2:-61021036 None:intergenic
AATCGGTTGGAGTTGTTGCA+AGG 0.547050 1.2:+61021430 MS.gene70802:CDS
AACAACATCGGCGACGCACT+GGG 0.551267 1.2:-61021340 None:intergenic
TCCAATAGTTCCTTCAACAA+TGG 0.555130 1.2:-61021298 None:intergenic
ATGGCAATGCTACTAGCATA+CGG 0.556871 1.2:+61021239 MS.gene70802:CDS
TGGCAATGCTACTAGCATAC+GGG 0.563532 1.2:+61021240 MS.gene70802:CDS
GGGATGAACAATGGTTAAAA+CGG 0.566430 1.2:+61021380 MS.gene70802:CDS
CGCCGATGTTGTTATCGACA+GGG 0.567511 1.2:+61021350 MS.gene70802:CDS
TGCCGTGTTTGTGTCATCTG+CGG 0.578987 1.2:-61020648 None:intergenic
AGCCATGGCCACCGTCACAA+CGG 0.580091 1.2:-61020621 None:intergenic
GACTTTGGACAAAGGCAAAG+AGG 0.584181 1.2:+61020964 MS.gene70802:CDS
TACGTAACTTCTCAACAAGC+TGG 0.586441 1.2:-61020919 None:intergenic
GTTGTTGCAAGGTCAGATCA+AGG 0.586461 1.2:+61021441 MS.gene70802:CDS
GACAAAATCCAAGAAACCAA+TGG 0.589116 1.2:-61020377 None:intergenic
TCAGAGGCTATGGACAAAGC+AGG 0.591463 1.2:+61020763 MS.gene70802:CDS
AGGTCAGATCAAGGCTAGGT+TGG 0.595411 1.2:+61021450 MS.gene70802:CDS
TGTTATCGACAGGGGAAGTG+AGG 0.599112 1.2:+61021359 MS.gene70802:CDS
TTCTTCTTCGGATGACGAAG+AGG 0.605501 1.2:-61020414 None:intergenic
GAAATTTCCCACAAGATTTG+GGG 0.610345 1.2:+61021028 MS.gene70802:CDS
GTTATCGACAGGGGAAGTGA+GGG 0.615083 1.2:+61021360 MS.gene70802:CDS
CTGGATTACATTAAACAGCA+AGG 0.616623 1.2:+61020812 MS.gene70802:CDS
CCCCGCAGATGACACAAACA+CGG 0.617705 1.2:+61020646 MS.gene70802:CDS
GACGAGATTGAACTGTTGAA+GGG 0.620700 1.2:+61020785 MS.gene70802:CDS
CACAAGATGACTTTGGACAA+AGG 0.621465 1.2:+61020956 MS.gene70802:CDS
CGTGTTTGTGTCATCTGCGG+GGG 0.627292 1.2:-61020645 None:intergenic
AACATCCAAAACGTCATGGT+CGG 0.630878 1.2:-61021059 None:intergenic
TGACGAAGAGGAAGATGATG+AGG 0.633419 1.2:-61020402 None:intergenic
CCGTGTTTGTGTCATCTGCG+GGG 0.639190 1.2:-61020646 None:intergenic
CATCAACATCCAAAACGTCA+TGG 0.640991 1.2:-61021063 None:intergenic
TGCAAGGTCAGATCAAGGCT+AGG 0.648837 1.2:+61021446 MS.gene70802:CDS
GGCAATGCTACTAGCATACG+GGG 0.651150 1.2:+61021241 MS.gene70802:CDS
TGTTATAGTGGTAGTAGCCG+CGG 0.655252 1.2:-61020687 None:intergenic
GCCGATGTTGTTATCGACAG+GGG 0.669203 1.2:+61021351 MS.gene70802:CDS
ATGAACAATGGTTAAAACGG+AGG 0.670080 1.2:+61021383 MS.gene70802:CDS
GGGAAGTGAGGGATGAACAA+TGG 0.671370 1.2:+61021371 MS.gene70802:CDS
AACAAACACAACCACCACCG+CGG 0.675230 1.2:+61020670 MS.gene70802:CDS
CATGGCCACCGTCACAACGG+GGG 0.676320 1.2:-61020618 None:intergenic
CCATGGCCACCGTCACAACG+GGG 0.678792 1.2:-61020619 None:intergenic
TCCCCTGTCGATAACAACAT+CGG 0.682290 1.2:-61021352 None:intergenic
ACGGCGTTAAACAATATCAG+AGG 0.682928 1.2:+61020747 MS.gene70802:CDS
GCAAATACTACTATTCAAAG+CGG 0.683552 1.2:+61020839 MS.gene70802:CDS
TATAGTGGTAGTAGCCGCGG+TGG 0.689187 1.2:-61020684 None:intergenic
AGTTATTTCCAAATTCAGCG+TGG 0.691134 1.2:+61020883 MS.gene70802:CDS
TGAAGACCAAATGGACAATG+TGG 0.693003 1.2:+61020502 MS.gene70802:CDS
AACATCGGCGACGCACTGGG+TGG 0.698538 1.2:-61021337 None:intergenic
AGCTTGTTGAGAAGTTACGT+AGG 0.729557 1.2:+61020921 MS.gene70802:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTGAAGAAACAGATAAA+AGG + chr1.2:61021155-61021174 MS.gene70802:CDS 20.0%
!!! TATAACAAAAAGTATTCAGA+CGG + chr1.2:61020728-61020747 MS.gene70802:CDS 20.0%
!!! TTTTGAAGAAACAGATAAAA+GGG + chr1.2:61021156-61021175 MS.gene70802:CDS 20.0%
! TATTGACAATGTTAAGATGA+AGG + chr1.2:61021117-61021136 MS.gene70802:CDS 25.0%
! TTAACATTGTCAATAAGATC+AGG - chr1.2:61021112-61021131 None:intergenic 25.0%
ACTTTCTTCTTCTTCTTCTT+CGG - chr1.2:61020429-61020448 None:intergenic 30.0%
AGAAGTTACGTAGGTTAAAA+AGG + chr1.2:61020930-61020949 MS.gene70802:CDS 30.0%
CATTGTATGGACATAGAAAA+TGG - chr1.2:61020544-61020563 None:intergenic 30.0%
GCAAATACTACTATTCAAAG+CGG + chr1.2:61020839-61020858 MS.gene70802:CDS 30.0%
TTAAACAATATCAGAGGCTA+TGG + chr1.2:61020753-61020772 MS.gene70802:CDS 30.0%
! TTTTCTATGTCCATACAATG+TGG + chr1.2:61020544-61020563 MS.gene70802:CDS 30.0%
AAGGAAACACAAGATGACTT+TGG + chr1.2:61020949-61020968 MS.gene70802:CDS 35.0%
ACAAAAAATGACCGGAACAA+TGG + chr1.2:61021220-61021239 MS.gene70802:CDS 35.0%
ACCATTGTTGAAGGAACTAT+TGG + chr1.2:61021297-61021316 MS.gene70802:CDS 35.0%
ACGTGAACACAAAAAATGAC+CGG + chr1.2:61021212-61021231 MS.gene70802:CDS 35.0%
ATGAACAATGGTTAAAACGG+AGG + chr1.2:61021383-61021402 MS.gene70802:CDS 35.0%
CGAAATTTCCCACAAGATTT+GGG + chr1.2:61021027-61021046 MS.gene70802:CDS 35.0%
CTGGATTACATTAAACAGCA+AGG + chr1.2:61020812-61020831 MS.gene70802:CDS 35.0%
CTTGTGGGAAATTTCGAAAA+TGG - chr1.2:61021023-61021042 None:intergenic 35.0%
GAAATTTCCCACAAGATTTG+GGG + chr1.2:61021028-61021047 MS.gene70802:CDS 35.0%
GACAAAATCCAAGAAACCAA+TGG - chr1.2:61020380-61020399 None:intergenic 35.0%
GGGATGAACAATGGTTAAAA+CGG + chr1.2:61021380-61021399 MS.gene70802:CDS 35.0%
TATCATCCACATTGTCCATT+TGG - chr1.2:61020511-61020530 None:intergenic 35.0%
TCAATAAGATCAGGACTTTC+AGG - chr1.2:61021103-61021122 None:intergenic 35.0%
TCCAATAGTTCCTTCAACAA+TGG - chr1.2:61021301-61021320 None:intergenic 35.0%
TCGAAATTTCCCACAAGATT+TGG + chr1.2:61021026-61021045 MS.gene70802:CDS 35.0%
TGACAATGTTGAAGACCAAA+TGG + chr1.2:61020493-61020512 MS.gene70802:CDS 35.0%
TGAGGGATCTTGAAAGAAAT+CGG - chr1.2:61020992-61021011 None:intergenic 35.0%
! AACTGGAGGTGTATTTGAAT+CGG + chr1.2:61021413-61021432 MS.gene70802:CDS 35.0%
! AGTTATTTCCAAATTCAGCG+TGG + chr1.2:61020883-61020902 MS.gene70802:CDS 35.0%
! ATGGTTAAAACGGAGGATTT+TGG + chr1.2:61021390-61021409 MS.gene70802:CDS 35.0%
! CAATGTGGATGATAACGAAA+AGG + chr1.2:61020517-61020536 MS.gene70802:CDS 35.0%
! TTGTTTCTCACCATTGTTGA+AGG + chr1.2:61021288-61021307 MS.gene70802:CDS 35.0%
!! TTTTGAGCGTGTTGTTATAG+TGG - chr1.2:61020702-61020721 None:intergenic 35.0%
AACATCCAAAACGTCATGGT+CGG - chr1.2:61021062-61021081 None:intergenic 40.0%
AATTCAGCGTGGAATTCAAC+AGG + chr1.2:61020894-61020913 MS.gene70802:CDS 40.0%
ACGGCGTTAAACAATATCAG+AGG + chr1.2:61020747-61020766 MS.gene70802:CDS 40.0%
ATGGCAATGCTACTAGCATA+CGG + chr1.2:61021239-61021258 MS.gene70802:CDS 40.0%
CAATGGGAATGTTGTCCATT+TGG - chr1.2:61020577-61020596 None:intergenic 40.0%
CAATGTGGATGAAGACCAAA+TGG + chr1.2:61020559-61020578 MS.gene70802:CDS 40.0%
CACAAGATGACTTTGGACAA+AGG + chr1.2:61020956-61020975 MS.gene70802:CDS 40.0%
CATCAACATCCAAAACGTCA+TGG - chr1.2:61021066-61021085 None:intergenic 40.0%
GACGAGATTGAACTGTTGAA+GGG + chr1.2:61020785-61020804 MS.gene70802:CDS 40.0%
GATTTCTTTCAAGATCCCTC+AGG + chr1.2:61020991-61021010 MS.gene70802:CDS 40.0%
GTTGAATTCCACGCTGAATT+TGG - chr1.2:61020894-61020913 None:intergenic 40.0%
TACGTAACTTCTCAACAAGC+TGG - chr1.2:61020922-61020941 None:intergenic 40.0%
TAGTAGCATTGCCATTGTTC+CGG - chr1.2:61021234-61021253 None:intergenic 40.0%
TGAACTGTTGAAGGGATATC+TGG + chr1.2:61020793-61020812 MS.gene70802:CDS 40.0%
TGAAGACCAAATGGACAATG+TGG + chr1.2:61020502-61020521 MS.gene70802:CDS 40.0%
TGGTCTTCATCCACATTGTA+TGG - chr1.2:61020557-61020576 None:intergenic 40.0%
TGGTGAGAAACAAGACTTCA+TGG - chr1.2:61021281-61021300 None:intergenic 40.0%
!! AGCTTGTTGAGAAGTTACGT+AGG + chr1.2:61020921-61020940 MS.gene70802:CDS 40.0%
!! TGCTTTCACCATTGGTTTCT+TGG + chr1.2:61020369-61020388 MS.gene70802:CDS 40.0%
!!! AAAACGGAGGATTTTGGAAC+TGG + chr1.2:61021396-61021415 MS.gene70802:CDS 40.0%
AATCGGTTGGAGTTGTTGCA+AGG + chr1.2:61021430-61021449 MS.gene70802:CDS 45.0%
AGATCAGGACTTTCAGGAAC+AGG - chr1.2:61021097-61021116 None:intergenic 45.0%
ATCAGAAACGGCAAGTGCAA+TGG - chr1.2:61020594-61020613 None:intergenic 45.0%
GACTTTGGACAAAGGCAAAG+AGG + chr1.2:61020964-61020983 MS.gene70802:CDS 45.0%
GGACGAGATTGAACTGTTGA+AGG + chr1.2:61020784-61020803 MS.gene70802:CDS 45.0%
GTCATTGCCCCAAATCTTGT+GGG - chr1.2:61021038-61021057 None:intergenic 45.0%
GTTGTTGCAAGGTCAGATCA+AGG + chr1.2:61021441-61021460 MS.gene70802:CDS 45.0%
TCAGAAACGGCAAGTGCAAT+GGG - chr1.2:61020593-61020612 None:intergenic 45.0%
TCCCCTGTCGATAACAACAT+CGG - chr1.2:61021355-61021374 None:intergenic 45.0%
TGACGAAGAGGAAGATGATG+AGG - chr1.2:61020405-61020424 None:intergenic 45.0%
TGGCAATGCTACTAGCATAC+GGG + chr1.2:61021240-61021259 MS.gene70802:CDS 45.0%
TGTCATTGCCCCAAATCTTG+TGG - chr1.2:61021039-61021058 None:intergenic 45.0%
TGTTATAGTGGTAGTAGCCG+CGG - chr1.2:61020690-61020709 None:intergenic 45.0%
TTCTTCTTCGGATGACGAAG+AGG - chr1.2:61020417-61020436 None:intergenic 45.0%
! GGAGGTGTATTTGAATCGGT+TGG + chr1.2:61021417-61021436 MS.gene70802:CDS 45.0%
!! CGAAAATGGCTTGTTCCTGA+GGG - chr1.2:61021009-61021028 None:intergenic 45.0%
!! TCGAAAATGGCTTGTTCCTG+AGG - chr1.2:61021010-61021029 None:intergenic 45.0%
AACAAACACAACCACCACCG+CGG + chr1.2:61020670-61020689 MS.gene70802:CDS 50.0%
AACGGGGGATGCATCAGAAA+CGG - chr1.2:61020606-61020625 None:intergenic 50.0%
AGGTCAGATCAAGGCTAGGT+TGG + chr1.2:61021450-61021469 MS.gene70802:CDS 50.0%
CGCCGATGTTGTTATCGACA+GGG + chr1.2:61021350-61021369 MS.gene70802:CDS 50.0%
GCCGATGTTGTTATCGACAG+GGG + chr1.2:61021351-61021370 MS.gene70802:CDS 50.0%
GGCAATGCTACTAGCATACG+GGG + chr1.2:61021241-61021260 MS.gene70802:CDS 50.0%
GGGAAGTGAGGGATGAACAA+TGG + chr1.2:61021371-61021390 MS.gene70802:CDS 50.0%
GTTATCGACAGGGGAAGTGA+GGG + chr1.2:61021360-61021379 MS.gene70802:CDS 50.0%
TCAGAGGCTATGGACAAAGC+AGG + chr1.2:61020763-61020782 MS.gene70802:CDS 50.0%
TCGCCGATGTTGTTATCGAC+AGG + chr1.2:61021349-61021368 MS.gene70802:CDS 50.0%
TGCAAGGTCAGATCAAGGCT+AGG + chr1.2:61021446-61021465 MS.gene70802:CDS 50.0%
TGCCGTGTTTGTGTCATCTG+CGG - chr1.2:61020651-61020670 None:intergenic 50.0%
TGTTATCGACAGGGGAAGTG+AGG + chr1.2:61021359-61021378 MS.gene70802:CDS 50.0%
! TCAGATCAAGGCTAGGTTGG+AGG + chr1.2:61021453-61021472 MS.gene70802:CDS 50.0%
! TGACACCGACCATGACGTTT+TGG + chr1.2:61021054-61021073 MS.gene70802:CDS 50.0%
!!! ACGGAGGATTTTGGAACTGG+AGG + chr1.2:61021399-61021418 MS.gene70802:CDS 50.0%
AACAACATCGGCGACGCACT+GGG - chr1.2:61021343-61021362 None:intergenic 55.0%
CCCCGCAGATGACACAAACA+CGG + chr1.2:61020646-61020665 MS.gene70802:CDS 55.0%
CCGTGTTTGTGTCATCTGCG+GGG - chr1.2:61020649-61020668 None:intergenic 55.0%
CGTGTTTGTGTCATCTGCGG+GGG - chr1.2:61020648-61020667 None:intergenic 55.0%
GCCGTGTTTGTGTCATCTGC+GGG - chr1.2:61020650-61020669 None:intergenic 55.0%
TAACAACATCGGCGACGCAC+TGG - chr1.2:61021344-61021363 None:intergenic 55.0%
TATAGTGGTAGTAGCCGCGG+TGG - chr1.2:61020687-61020706 None:intergenic 55.0%
TGATGCATCCCCCGTTGTGA+CGG + chr1.2:61020610-61020629 MS.gene70802:CDS 55.0%
AGCCATGGCCACCGTCACAA+CGG - chr1.2:61020624-61020643 None:intergenic 60.0%
AACATCGGCGACGCACTGGG+TGG - chr1.2:61021340-61021359 None:intergenic 65.0%
AGTGGTAGTAGCCGCGGTGG+TGG - chr1.2:61020684-61020703 None:intergenic 65.0%
CATGGCCACCGTCACAACGG+GGG - chr1.2:61020621-61020640 None:intergenic 65.0%
CCATGGCCACCGTCACAACG+GGG - chr1.2:61020622-61020641 None:intergenic 65.0%
GCCATGGCCACCGTCACAAC+GGG - chr1.2:61020623-61020642 None:intergenic 65.0%
TGCATCCCCCGTTGTGACGG+TGG + chr1.2:61020613-61020632 MS.gene70802:CDS 65.0%
! GACGCACTGGGTGGCTCTAC+TGG - chr1.2:61021331-61021350 None:intergenic 65.0%
CCCCGTTGTGACGGTGGCCA+TGG + chr1.2:61020619-61020638 MS.gene70802:CDS 70.0%
GTCATCTGCGGGGGCAGCCA+TGG - chr1.2:61020639-61020658 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 61020368 61021498 61020368 ID=MS.gene70802
chr1.2 mRNA 61020368 61021498 61020368 ID=MS.gene70802.t1;Parent=MS.gene70802
chr1.2 exon 61020368 61021498 61020368 ID=MS.gene70802.t1.exon1;Parent=MS.gene70802.t1
chr1.2 CDS 61020368 61021498 61020368 ID=cds.MS.gene70802.t1;Parent=MS.gene70802.t1
Gene Sequence

>MS.gene70802

ATGCTTTCACCATTGGTTTCTTGGATTTTGTCAACCTCATCATCTTCCTCTTCGTCATCCGAAGAAGAAGAAGAAGAAAGTCTTGACATTAATAATGACGAAGCAGACTGTGAAAACTTTGAAAATGACAATGTTGAAGACCAAATGGACAATGTGGATGATAACGAAAAGGACCATTTTCTATGTCCATACAATGTGGATGAAGACCAAATGGACAACATTCCCATTGCACTTGCCGTTTCTGATGCATCCCCCGTTGTGACGGTGGCCATGGCTGCCCCCGCAGATGACACAAACACGGCAACAAACACAACCACCACCGCGGCTACTACCACTATAACAACACGCTCAAAACGACAATATAACAAAAAGTATTCAGACGGCGTTAAACAATATCAGAGGCTATGGACAAAGCAGGACGAGATTGAACTGTTGAAGGGATATCTGGATTACATTAAACAGCAAGGAAGAGCAAATACTACTATTCAAAGCGGCGTAGCTTCATTCTATGATCAAGTTATTTCCAAATTCAGCGTGGAATTCAACAGGAACCAGCTTGTTGAGAAGTTACGTAGGTTAAAAAGGAAACACAAGATGACTTTGGACAAAGGCAAAGAGGTTCCGATTTCTTTCAAGATCCCTCAGGAACAAGCCATTTTCGAAATTTCCCACAAGATTTGGGGCAATGACACCGACCATGACGTTTTGGATGTTGATGAATCAAGACCTGTTCCTGAAAGTCCTGATCTTATTGACAATGTTAAGATGAAGGATGAAGATGTTGACAATTTTGAAGAAACAGATAAAAGGGTGCACAAGCGTGTGAAGATAACAACAGATGACGACGTGAACACAAAAAATGACCGGAACAATGGCAATGCTACTAGCATACGGGGCTTCATTGAAGAAACCATGAAGTCTTGTTTCTCACCATTGTTGAAGGAACTATTGGATGATGTTCCAGTAGAGCCACCCAGTGCGTCGCCGATGTTGTTATCGACAGGGGAAGTGAGGGATGAACAATGGTTAAAACGGAGGATTTTGGAACTGGAGGTGTATTTGAATCGGTTGGAGTTGTTGCAAGGTCAGATCAAGGCTAGGTTGGAGGAGTTAAAGTCTAGCTTAGATTGA
Protein sequence

>MS.gene70802.t1

MLSPLVSWILSTSSSSSSSSEEEEEESLDINNDEADCENFENDNVEDQMDNVDDNEKDHFLCPYNVDEDQMDNIPIALAVSDASPVVTVAMAAPADDTNTATNTTTTAATTTITTRSKRQYNKKYSDGVKQYQRLWTKQDEIELLKGYLDYIKQQGRANTTIQSGVASFYDQVISKFSVEFNRNQLVEKLRRLKRKHKMTLDKGKEVPISFKIPQEQAIFEISHKIWGNDTDHDVLDVDESRPVPESPDLIDNVKMKDEDVDNFEETDKRVHKRVKITTDDDVNTKNDRNNGNATSIRGFIEETMKSCFSPLLKELLDDVPVEPPSASPMLLSTGEVRDEQWLKRRILELEVYLNRLELLQGQIKARLEELKSSLD