Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70984.t1 | XP_003628698.1 | 92.1 | 290 | 23 | 0 | 1 | 290 | 1 | 290 | 2.10E-132 | 481.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70984.t1 | Q9FNN6 | 50.2 | 307 | 116 | 6 | 1 | 286 | 3 | 293 | 1.4e-52 | 208.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70984.t1 | G7I733 | 92.1 | 290 | 23 | 0 | 1 | 290 | 1 | 290 | 1.5e-132 | 481.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene70984.t1 | TF | MYB |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70984.t1 | MTR_8g063600 | 95.172 | 290 | 14 | 0 | 1 | 290 | 1 | 290 | 0.0 | 572 |
| MS.gene70984.t1 | MTR_8g063870 | 61.667 | 300 | 76 | 7 | 1 | 289 | 1 | 272 | 4.38e-115 | 332 |
| MS.gene70984.t1 | MTR_4g111975 | 45.230 | 283 | 98 | 11 | 10 | 249 | 8 | 276 | 8.89e-64 | 203 |
| MS.gene70984.t1 | MTR_1g033620 | 60.843 | 166 | 53 | 3 | 121 | 285 | 20 | 174 | 2.05e-57 | 184 |
| MS.gene70984.t1 | MTR_1g111830 | 53.889 | 180 | 77 | 3 | 8 | 183 | 22 | 199 | 3.33e-53 | 174 |
| MS.gene70984.t1 | MTR_5g081860 | 48.634 | 183 | 92 | 1 | 3 | 183 | 20 | 202 | 7.54e-52 | 171 |
| MS.gene70984.t1 | MTR_3g462790 | 47.340 | 188 | 89 | 3 | 2 | 181 | 35 | 220 | 2.60e-51 | 171 |
| MS.gene70984.t1 | MTR_5g069710 | 44.118 | 204 | 100 | 5 | 2 | 198 | 23 | 219 | 3.88e-50 | 168 |
| MS.gene70984.t1 | MTR_7g067080 | 47.283 | 184 | 86 | 3 | 9 | 183 | 34 | 215 | 9.59e-48 | 162 |
| MS.gene70984.t1 | MTR_1g033600 | 56.250 | 128 | 42 | 1 | 1 | 114 | 3 | 130 | 9.86e-42 | 141 |
| MS.gene70984.t1 | MTR_5g075760 | 41.520 | 171 | 86 | 8 | 5 | 170 | 8 | 169 | 4.84e-27 | 105 |
| MS.gene70984.t1 | MTR_5g075790 | 39.645 | 169 | 91 | 6 | 5 | 170 | 17 | 177 | 8.16e-27 | 104 |
| MS.gene70984.t1 | MTR_5g088010 | 57.500 | 80 | 33 | 1 | 102 | 180 | 56 | 135 | 1.62e-25 | 102 |
| MS.gene70984.t1 | MTR_6g092540 | 54.808 | 104 | 38 | 3 | 100 | 203 | 91 | 185 | 5.86e-25 | 101 |
| MS.gene70984.t1 | MTR_4g100630 | 58.974 | 78 | 30 | 1 | 95 | 172 | 84 | 159 | 2.28e-24 | 100 |
| MS.gene70984.t1 | MTR_2g100930 | 62.195 | 82 | 25 | 2 | 95 | 172 | 94 | 173 | 4.69e-24 | 100 |
| MS.gene70984.t1 | MTR_8g101650 | 61.644 | 73 | 25 | 1 | 100 | 172 | 99 | 168 | 1.43e-23 | 97.4 |
| MS.gene70984.t1 | MTR_5g088060 | 60.759 | 79 | 29 | 2 | 103 | 180 | 270 | 347 | 2.97e-23 | 99.4 |
| MS.gene70984.t1 | MTR_5g488160 | 60.759 | 79 | 29 | 2 | 103 | 180 | 270 | 347 | 2.97e-23 | 99.4 |
| MS.gene70984.t1 | MTR_5g027570 | 43.363 | 113 | 54 | 1 | 102 | 214 | 88 | 190 | 4.04e-23 | 95.1 |
| MS.gene70984.t1 | MTR_1g022290 | 56.522 | 69 | 30 | 0 | 4 | 72 | 1 | 69 | 2.39e-21 | 86.7 |
| MS.gene70984.t1 | MTR_3g116720 | 52.308 | 65 | 31 | 0 | 10 | 74 | 16 | 80 | 1.31e-19 | 81.6 |
| MS.gene70984.t1 | MTR_5g037080 | 56.962 | 79 | 32 | 1 | 95 | 173 | 91 | 167 | 1.94e-19 | 86.7 |
| MS.gene70984.t1 | MTR_3g111880 | 53.623 | 69 | 32 | 0 | 4 | 72 | 1 | 69 | 6.16e-19 | 80.1 |
| MS.gene70984.t1 | MTR_4g107230 | 69.231 | 52 | 16 | 0 | 100 | 151 | 78 | 129 | 7.82e-19 | 84.7 |
| MS.gene70984.t1 | MTR_5g027550 | 42.735 | 117 | 57 | 3 | 102 | 217 | 73 | 180 | 1.05e-18 | 83.2 |
| MS.gene70984.t1 | MTR_3g104370 | 50.000 | 84 | 41 | 1 | 96 | 178 | 81 | 164 | 2.00e-18 | 82.4 |
| MS.gene70984.t1 | MTR_0036s0260 | 54.412 | 68 | 29 | 1 | 106 | 173 | 28 | 93 | 1.20e-17 | 79.7 |
| MS.gene70984.t1 | MTR_5g020170 | 52.941 | 68 | 32 | 0 | 5 | 72 | 14 | 81 | 2.97e-17 | 75.9 |
| MS.gene70984.t1 | MTR_4g015130 | 60.000 | 60 | 22 | 1 | 116 | 175 | 3 | 60 | 1.87e-16 | 73.2 |
| MS.gene70984.t1 | MTR_7g089210 | 52.174 | 69 | 33 | 0 | 14 | 82 | 16 | 84 | 1.87e-16 | 73.2 |
| MS.gene70984.t1 | MTR_2g090305 | 54.412 | 68 | 29 | 1 | 106 | 173 | 28 | 93 | 2.15e-16 | 75.9 |
| MS.gene70984.t1 | MTR_6g004250 | 50.000 | 72 | 36 | 0 | 1 | 72 | 1 | 72 | 7.48e-16 | 71.6 |
| MS.gene70984.t1 | MTR_3g013440 | 49.315 | 73 | 36 | 1 | 1 | 72 | 1 | 73 | 4.90e-15 | 69.7 |
| MS.gene70984.t1 | MTR_1g048660 | 45.455 | 77 | 38 | 2 | 107 | 182 | 13 | 86 | 1.27e-13 | 65.9 |
| MS.gene70984.t1 | MTR_3g070110 | 35.625 | 160 | 89 | 6 | 22 | 173 | 14 | 167 | 1.87e-13 | 68.6 |
| MS.gene70984.t1 | MTR_8g077360 | 40.000 | 70 | 41 | 1 | 10 | 79 | 5 | 73 | 2.39e-12 | 61.6 |
| MS.gene70984.t1 | MTR_8g077380 | 40.580 | 69 | 40 | 1 | 10 | 78 | 5 | 72 | 2.85e-12 | 61.6 |
| MS.gene70984.t1 | MTR_8g077390 | 40.580 | 69 | 40 | 1 | 10 | 78 | 5 | 72 | 2.85e-12 | 61.6 |
| MS.gene70984.t1 | MTR_1g083180 | 45.679 | 81 | 42 | 2 | 108 | 187 | 63 | 142 | 4.12e-12 | 63.9 |
| MS.gene70984.t1 | MTR_3g111920 | 45.312 | 64 | 33 | 2 | 10 | 72 | 3 | 65 | 4.27e-12 | 61.2 |
| MS.gene70984.t1 | MTR_5g020540 | 47.541 | 61 | 31 | 1 | 10 | 70 | 4 | 63 | 1.97e-11 | 58.9 |
| MS.gene70984.t1 | MTR_8g077420 | 43.284 | 67 | 35 | 2 | 4 | 70 | 1 | 64 | 4.09e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70984.t1 | AT5G08520 | 50.495 | 303 | 121 | 7 | 1 | 286 | 3 | 293 | 3.72e-88 | 265 |
| MS.gene70984.t1 | AT5G23650 | 38.182 | 330 | 146 | 6 | 3 | 276 | 6 | 333 | 1.10e-58 | 191 |
| MS.gene70984.t1 | AT1G49010 | 41.135 | 282 | 116 | 9 | 10 | 254 | 8 | 276 | 3.94e-51 | 171 |
| MS.gene70984.t1 | AT2G38090 | 47.283 | 184 | 79 | 3 | 8 | 175 | 27 | 208 | 8.48e-50 | 167 |
| MS.gene70984.t1 | AT5G04760 | 52.353 | 170 | 76 | 3 | 6 | 175 | 2 | 166 | 9.40e-50 | 164 |
| MS.gene70984.t1 | AT5G58900 | 46.703 | 182 | 84 | 2 | 5 | 175 | 29 | 208 | 3.42e-49 | 165 |
| MS.gene70984.t1 | AT5G05790 | 46.995 | 183 | 89 | 4 | 7 | 183 | 28 | 208 | 4.08e-47 | 159 |
| MS.gene70984.t1 | AT5G05790 | 46.995 | 183 | 89 | 4 | 7 | 183 | 28 | 208 | 4.08e-47 | 159 |
| MS.gene70984.t1 | AT3G11280 | 51.220 | 164 | 76 | 2 | 10 | 173 | 33 | 192 | 2.05e-46 | 157 |
| MS.gene70984.t1 | AT3G11280 | 51.220 | 164 | 76 | 2 | 10 | 173 | 33 | 192 | 2.05e-46 | 157 |
| MS.gene70984.t1 | AT5G01200 | 43.548 | 186 | 83 | 5 | 10 | 175 | 30 | 213 | 9.19e-41 | 142 |
| MS.gene70984.t1 | AT3G10580 | 42.286 | 175 | 86 | 4 | 10 | 183 | 8 | 168 | 9.30e-36 | 129 |
| MS.gene70984.t1 | AT3G10580 | 42.286 | 175 | 86 | 4 | 10 | 183 | 8 | 168 | 1.82e-35 | 129 |
| MS.gene70984.t1 | AT4G09450 | 42.105 | 171 | 85 | 3 | 4 | 174 | 1 | 157 | 2.23e-32 | 119 |
| MS.gene70984.t1 | AT5G47390 | 56.701 | 97 | 40 | 1 | 84 | 180 | 74 | 168 | 2.14e-26 | 107 |
| MS.gene70984.t1 | AT5G56840 | 61.039 | 77 | 29 | 1 | 101 | 177 | 86 | 161 | 4.15e-23 | 95.5 |
| MS.gene70984.t1 | AT3G10590 | 35.829 | 187 | 93 | 8 | 4 | 174 | 1 | 176 | 2.28e-21 | 90.1 |
| MS.gene70984.t1 | AT5G61620 | 51.220 | 82 | 38 | 1 | 93 | 174 | 95 | 174 | 7.36e-20 | 88.2 |
| MS.gene70984.t1 | AT1G70000 | 66.102 | 59 | 20 | 0 | 95 | 153 | 87 | 145 | 1.80e-19 | 85.9 |
| MS.gene70984.t1 | AT1G70000 | 66.102 | 59 | 20 | 0 | 95 | 153 | 87 | 145 | 1.80e-19 | 85.9 |
| MS.gene70984.t1 | AT3G16350 | 60.000 | 70 | 20 | 1 | 84 | 153 | 123 | 184 | 2.00e-19 | 87.8 |
| MS.gene70984.t1 | AT4G39250 | 53.846 | 65 | 30 | 0 | 10 | 74 | 14 | 78 | 2.18e-19 | 81.6 |
| MS.gene70984.t1 | AT1G75250 | 51.429 | 70 | 34 | 0 | 10 | 79 | 12 | 81 | 5.85e-19 | 80.5 |
| MS.gene70984.t1 | AT1G75250 | 51.429 | 70 | 34 | 0 | 10 | 79 | 12 | 81 | 2.88e-18 | 79.3 |
| MS.gene70984.t1 | AT1G19000 | 61.667 | 60 | 23 | 0 | 92 | 151 | 88 | 147 | 1.98e-17 | 80.9 |
| MS.gene70984.t1 | AT1G19000 | 61.667 | 60 | 23 | 0 | 92 | 151 | 88 | 147 | 1.98e-17 | 80.9 |
| MS.gene70984.t1 | AT1G74840 | 68.627 | 51 | 16 | 0 | 101 | 151 | 91 | 141 | 2.11e-17 | 80.1 |
| MS.gene70984.t1 | AT1G74840 | 68.627 | 51 | 16 | 0 | 101 | 151 | 91 | 141 | 2.68e-17 | 80.1 |
| MS.gene70984.t1 | AT2G21650 | 50.000 | 72 | 36 | 0 | 10 | 81 | 14 | 85 | 2.84e-16 | 73.2 |
| MS.gene70984.t1 | AT2G18328 | 55.932 | 59 | 26 | 0 | 14 | 72 | 15 | 73 | 1.57e-15 | 70.5 |
| MS.gene70984.t1 | AT1G19510 | 46.377 | 69 | 37 | 0 | 14 | 82 | 16 | 84 | 3.21e-14 | 67.8 |
Find 89 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCTTGCTTGACCGGTAAT+TGG | 0.261142 | 8.4:-37639205 | None:intergenic |
| TCACAGAACAATGGATGAAA+TGG | 0.332083 | 8.4:+37636430 | None:intergenic |
| GATATCAACCACATTGAATC+TGG | 0.342793 | 8.4:+37636611 | MS.gene70984:CDS |
| GGCATAACTGTCTCAGAAAC+TGG | 0.395799 | 8.4:-37639436 | None:intergenic |
| CACCCCATCCATGGTTCTCC+AGG | 0.402855 | 8.4:-37639006 | None:intergenic |
| GGAGACATGGATTATGGTCT+TGG | 0.404056 | 8.4:+37639412 | MS.gene70984:CDS |
| GCTCCCGGAGACATGGATTA+TGG | 0.405160 | 8.4:+37639406 | MS.gene70984:CDS |
| AAAATCGCGGCTGATGTGCC+TGG | 0.417984 | 8.4:+37636542 | MS.gene70984:CDS |
| GCTGGAATACACGCTGCTCC+TGG | 0.421919 | 8.4:+37639322 | MS.gene70984:CDS |
| TTGAACAGGCTATTTCTTCA+AGG | 0.422344 | 8.4:+37638983 | MS.gene70984:intron |
| AGCAGAATTGCTTGCTTGAC+CGG | 0.425370 | 8.4:-37639212 | None:intergenic |
| TTGATTCCAGCAGGTGGGAC+TGG | 0.426711 | 8.4:-37639271 | None:intergenic |
| GATACAACTGGTCCTCCTAT+AGG | 0.431345 | 8.4:-37639355 | None:intergenic |
| TACACGCTGCTCCTGGGATC+GGG | 0.437370 | 8.4:+37639329 | MS.gene70984:CDS |
| CCTGGGATCGGGCAACCTAT+AGG | 0.438438 | 8.4:+37639340 | MS.gene70984:CDS |
| TGTATTCCAGCAGGTGGGGC+TGG | 0.439045 | 8.4:-37639310 | None:intergenic |
| GTCATAGGACCCAGGTTCAT+TGG | 0.445696 | 8.4:-37639466 | None:intergenic |
| GCACCTCAAGGACCAATTAC+CGG | 0.448210 | 8.4:+37639193 | MS.gene70984:CDS |
| AATTCTGCTGCAAGTTCTGC+TGG | 0.448212 | 8.4:+37639226 | MS.gene70984:CDS |
| AATCCTCCAGCCCCACCTGC+TGG | 0.449144 | 8.4:+37639304 | MS.gene70984:CDS |
| CAGGCTATTTCTTCAAGGCC+TGG | 0.460201 | 8.4:+37638988 | MS.gene70984:intron |
| CATCGATCCACAACGTCCTC+GGG | 0.461836 | 8.4:-37636515 | None:intergenic |
| GCTCCTCCAGTCCCACCTGC+TGG | 0.465316 | 8.4:+37639265 | MS.gene70984:CDS |
| CCCAGGTTCATTGGTACCCC+TGG | 0.466627 | 8.4:-37639457 | None:intergenic |
| TGGGACTGGAGGAGCTTGTT+CGG | 0.472434 | 8.4:-37639257 | None:intergenic |
| GTGAAGGAGGAGCTGTGAAA+AGG | 0.473544 | 8.4:+37636690 | MS.gene70984:CDS |
| CACAGAACAATGGATGAAAT+GGG | 0.481775 | 8.4:+37636431 | None:intergenic |
| AGAACCATGGATGGGGTGAC+TGG | 0.483144 | 8.4:+37639011 | MS.gene70984:CDS |
| CTGGAATACACGCTGCTCCT+GGG | 0.493957 | 8.4:+37639323 | MS.gene70984:CDS |
| ATCGGCGAAAGGGTGTTCCT+TGG | 0.493984 | 8.4:+37636741 | MS.gene70984:CDS |
| TGAAGGAGGAGCTGTGAAAA+GGG | 0.494794 | 8.4:+37636691 | MS.gene70984:CDS |
| ATACACGCTGCTCCTGGGAT+CGG | 0.497217 | 8.4:+37639328 | MS.gene70984:CDS |
| CCATCGATCCACAACGTCCT+CGG | 0.498372 | 8.4:-37636516 | None:intergenic |
| GCCAGGGGTACCAATGAACC+TGG | 0.500745 | 8.4:+37639456 | MS.gene70984:CDS |
| AGCTGTGAAAAGGGGAACTA+AGG | 0.503790 | 8.4:+37636700 | MS.gene70984:CDS |
| GTACCAACTGCAGATACAAC+TGG | 0.516981 | 8.4:-37639367 | None:intergenic |
| CCGAGGACGTTGTGGATCGA+TGG | 0.518278 | 8.4:+37636516 | MS.gene70984:CDS |
| CCTATAGGTTGCCCGATCCC+AGG | 0.518381 | 8.4:-37639340 | None:intergenic |
| TCAGAAATACAAAATTCGTC+AGG | 0.519592 | 8.4:+37639093 | MS.gene70984:CDS |
| AAAGGTAACATCATGTATGC+TGG | 0.520807 | 8.4:-37639149 | None:intergenic |
| TGTTGCATGGCATATGTCAT+AGG | 0.522230 | 8.4:-37639481 | None:intergenic |
| CAAAGCATTTGAAAATGCAT+TGG | 0.524922 | 8.4:+37636484 | MS.gene70984:CDS |
| TGAAAGAGAAGAAAGAAAGA+AGG | 0.525485 | 8.4:+37639122 | MS.gene70984:CDS |
| CCGGGAGCAGTAAAATTCAC+TGG | 0.526088 | 8.4:-37639391 | None:intergenic |
| ATTCCAGCAGGTGGGGCTGG+AGG | 0.527139 | 8.4:-37639307 | None:intergenic |
| AGCGTGTATTCCAGCAGGTG+GGG | 0.532991 | 8.4:-37639314 | None:intergenic |
| GCATGGCTTGCTACTTGTGT+AGG | 0.536057 | 8.4:-37639070 | None:intergenic |
| AAGACCATAATCCATGTCTC+CGG | 0.538089 | 8.4:-37639410 | None:intergenic |
| CAGCGTGTATTCCAGCAGGT+GGG | 0.540781 | 8.4:-37639315 | None:intergenic |
| GGAGCAGCGTGTATTCCAGC+AGG | 0.541289 | 8.4:-37639319 | None:intergenic |
| CTATGTTCATCTTCCGTCCA+AGG | 0.545058 | 8.4:-37636758 | None:intergenic |
| CTTCGAGTTCTTATCAAGAT+CGG | 0.548339 | 8.4:+37636723 | MS.gene70984:CDS |
| GTTTCTGAGACAGTTATGCC+AGG | 0.548613 | 8.4:+37639439 | MS.gene70984:CDS |
| GCAGCGTGTATTCCAGCAGG+TGG | 0.551793 | 8.4:-37639316 | None:intergenic |
| TCAACAAAGCGTACTGGTGA+AGG | 0.552257 | 8.4:+37636674 | MS.gene70984:CDS |
| AAGAGCTCAACAAAGCGTAC+TGG | 0.557196 | 8.4:+37636668 | MS.gene70984:CDS |
| AAGGCCTGGAGAACCATGGA+TGG | 0.559427 | 8.4:+37639002 | MS.gene70984:CDS |
| AGACCATAATCCATGTCTCC+GGG | 0.563041 | 8.4:-37639409 | None:intergenic |
| AAATCGCGGCTGATGTGCCT+GGG | 0.567997 | 8.4:+37636543 | MS.gene70984:CDS |
| CGAGGACGTTGTGGATCGAT+GGG | 0.568594 | 8.4:+37636517 | MS.gene70984:CDS |
| CTTGGACGGAAGATGAACAT+AGG | 0.569094 | 8.4:+37636759 | MS.gene70984:CDS |
| GCGAAAGGGTGTTCCTTGGA+CGG | 0.572566 | 8.4:+37636745 | MS.gene70984:CDS |
| TCTTATCAAGATCGGCGAAA+GGG | 0.576341 | 8.4:+37636731 | MS.gene70984:CDS |
| TTCTTATCAAGATCGGCGAA+AGG | 0.577807 | 8.4:+37636730 | MS.gene70984:CDS |
| TTCGCCAGTCACCCCATCCA+TGG | 0.577904 | 8.4:-37639015 | None:intergenic |
| ATTCCAGCAGGTGGGACTGG+AGG | 0.578008 | 8.4:-37639268 | None:intergenic |
| AGGCCTGGAGAACCATGGAT+GGG | 0.582995 | 8.4:+37639003 | MS.gene70984:CDS |
| GAATTATCCCGAGGACGTTG+TGG | 0.584276 | 8.4:+37636508 | MS.gene70984:CDS |
| AAAGAATCATAATCTGGCAG+AGG | 0.587497 | 8.4:-37636641 | None:intergenic |
| TTTCTGAGACAGTTATGCCA+GGG | 0.595865 | 8.4:+37639440 | MS.gene70984:CDS |
| GGACCAGTTGTATCTGCAGT+TGG | 0.597989 | 8.4:+37639364 | MS.gene70984:CDS |
| AGAGATTAAGCGTCACTATG+TGG | 0.598823 | 8.4:+37636577 | MS.gene70984:CDS |
| CTTCAAGGCCTGGAGAACCA+TGG | 0.600275 | 8.4:+37638998 | MS.gene70984:CDS |
| GTGACTGGCGAAGTATATCA+AGG | 0.602104 | 8.4:+37639026 | MS.gene70984:CDS |
| GGCCTGGAGAACCATGGATG+GGG | 0.620882 | 8.4:+37639004 | MS.gene70984:CDS |
| AAATGGGTAGCAGCTGTGAG+TGG | 0.631015 | 8.4:+37636447 | MS.gene70984:CDS |
| GGGATCGGGCAACCTATAGG+AGG | 0.633934 | 8.4:+37639343 | MS.gene70984:CDS |
| ACAAAGCGTACTGGTGAAGG+AGG | 0.640829 | 8.4:+37636677 | MS.gene70984:CDS |
| GGAGACATTTCAGCACCTCA+AGG | 0.642144 | 8.4:+37639181 | MS.gene70984:CDS |
| TTCTGAGACAGTTATGCCAG+GGG | 0.654155 | 8.4:+37639441 | MS.gene70984:CDS |
| GAAGGAGGAGCTGTGAAAAG+GGG | 0.656925 | 8.4:+37636692 | MS.gene70984:CDS |
| TGGCATATGTCATAGGACCC+AGG | 0.664666 | 8.4:-37639474 | None:intergenic |
| CCAGGGGTACCAATGAACCT+GGG | 0.686028 | 8.4:+37639457 | MS.gene70984:CDS |
| TGCATTGGCGAATTATCCCG+AGG | 0.693717 | 8.4:+37636499 | MS.gene70984:CDS |
| TTGAGCATATGTATGTTGCA+TGG | 0.694059 | 8.4:-37639494 | None:intergenic |
| TGACCGGTAATTGGTCCTTG+AGG | 0.703451 | 8.4:-37639196 | None:intergenic |
| GGATCGATGGGAGAAAATCG+CGG | 0.726953 | 8.4:+37636529 | MS.gene70984:CDS |
| AAGTATATCAAGGTACAGTG+TGG | 0.727880 | 8.4:+37639036 | MS.gene70984:CDS |
| GCACAAAACCAGATTCAATG+TGG | 0.730016 | 8.4:-37636619 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATTTAAATAAAATAA+AGG | - | chr8.4:37637084-37637103 | None:intergenic | 0.0% |
| !! | ACTAAAATCATATTTAAATA+CGG | - | chr8.4:37636794-37636813 | None:intergenic | 10.0% |
| !!! | TTAATAATTATAGTGTTTTT+TGG | - | chr8.4:37637036-37637055 | None:intergenic | 10.0% |
| !! | AATCTAAACAAAAAAACTTA+GGG | + | chr8.4:37637001-37637020 | MS.gene70984:intron | 15.0% |
| !! | TATTTAAATATATACTCTTG+AGG | + | chr8.4:37637090-37637109 | MS.gene70984:intron | 15.0% |
| !!! | TATAATAACTTTTCTAACAT+GGG | + | chr8.4:37638610-37638629 | MS.gene70984:intron | 15.0% |
| !!! | TCTTGTAAGTTTTTTTTTAT+TGG | + | chr8.4:37636844-37636863 | MS.gene70984:intron | 15.0% |
| !!! | TTCATTGATGTTTTAATTTT+AGG | - | chr8.4:37637929-37637948 | None:intergenic | 15.0% |
| !! | AAAACATCAATGAAAATGTA+TGG | + | chr8.4:37637935-37637954 | MS.gene70984:intron | 20.0% |
| !! | AAACATCAATGAAAATGTAT+GGG | + | chr8.4:37637936-37637955 | MS.gene70984:intron | 20.0% |
| !! | ACACTATAATTATTAATTGC+AGG | + | chr8.4:37637040-37637059 | MS.gene70984:intron | 20.0% |
| !! | ATAAAACTATGGATTTAATG+AGG | + | chr8.4:37637596-37637615 | MS.gene70984:intron | 20.0% |
| !! | CACTATAATTATTAATTGCA+GGG | + | chr8.4:37637041-37637060 | MS.gene70984:intron | 20.0% |
| !! | GAATCTAAACAAAAAAACTT+AGG | + | chr8.4:37637000-37637019 | MS.gene70984:intron | 20.0% |
| !! | GAATGAAGTAAATAAAACTA+TGG | + | chr8.4:37637585-37637604 | MS.gene70984:intron | 20.0% |
| !! | GATATGAATGATTAAAATGA+TGG | + | chr8.4:37637241-37637260 | MS.gene70984:intron | 20.0% |
| !! | TTGGTAAATACTGATAAATA+AGG | + | chr8.4:37638652-37638671 | MS.gene70984:intron | 20.0% |
| !! | TTTGAAAAAGAATCATAATC+TGG | - | chr8.4:37636650-37636669 | None:intergenic | 20.0% |
| !!! | GTAAGTTCTAATAAATACAT+TGG | - | chr8.4:37637731-37637750 | None:intergenic | 20.0% |
| !!! | GTATAATAACTTTTCTAACA+TGG | + | chr8.4:37638609-37638628 | MS.gene70984:intron | 20.0% |
| !!! | TTTTAGGATGTTTTAATTCT+AGG | - | chr8.4:37637913-37637932 | None:intergenic | 20.0% |
| ! | AAAACCAAAAAGATCTGATA+GGG | - | chr8.4:37638815-37638834 | None:intergenic | 25.0% |
| ! | AAAGTTTGAATTAGGAAGTT+TGG | + | chr8.4:37638633-37638652 | MS.gene70984:intron | 25.0% |
| ! | AACATCAATGAAAATGTATG+GGG | + | chr8.4:37637937-37637956 | MS.gene70984:intron | 25.0% |
| ! | AATTGCAGACATTAGTTATA+TGG | + | chr8.4:37638875-37638894 | MS.gene70984:intron | 25.0% |
| ! | AGACTTTGATACATTGATAT+AGG | + | chr8.4:37638124-37638143 | MS.gene70984:intron | 25.0% |
| ! | GATAAATAAGGACTAGAATT+GGG | + | chr8.4:37638664-37638683 | MS.gene70984:intron | 25.0% |
| ! | GATGTTACCTTTGTAAAAAA+TGG | + | chr8.4:37639160-37639179 | MS.gene70984:CDS | 25.0% |
| ! | TAAAACCAAAAAGATCTGAT+AGG | - | chr8.4:37638816-37638835 | None:intergenic | 25.0% |
| ! | TAGGATATTGTGTTAGTATT+AGG | - | chr8.4:37638046-37638065 | None:intergenic | 25.0% |
| ! | TAGTAGGATTAAATAGTGTT+GGG | + | chr8.4:37637778-37637797 | MS.gene70984:intron | 25.0% |
| ! | TGATAAATAAGGACTAGAAT+TGG | + | chr8.4:37638663-37638682 | MS.gene70984:intron | 25.0% |
| ! | TGTAATAAATTCTTCTGATG+TGG | + | chr8.4:37637694-37637713 | MS.gene70984:intron | 25.0% |
| ! | TGTTACTGATAATCATCTAA+TGG | - | chr8.4:37638853-37638872 | None:intergenic | 25.0% |
| !! | AGATCCGTTGAAAAATTTTA+AGG | - | chr8.4:37637460-37637479 | None:intergenic | 25.0% |
| !! | TTAGTAACTTTTCCAAAGAT+TGG | - | chr8.4:37638225-37638244 | None:intergenic | 25.0% |
| !! | TTGACTAAATTTAGAGTTAC+TGG | + | chr8.4:37638506-37638525 | MS.gene70984:intron | 25.0% |
| !! | TTTTACTAAACCATTGTATC+TGG | + | chr8.4:37637518-37637537 | MS.gene70984:intron | 25.0% |
| !!! | AAACACAGAAGTTTTTTACT+AGG | + | chr8.4:37638704-37638723 | MS.gene70984:intron | 25.0% |
| !!! | AATGTCTCCATTTTTTACAA+AGG | - | chr8.4:37639170-37639189 | None:intergenic | 25.0% |
| !!! | CAACCATTTTTGAATTTACT+GGG | + | chr8.4:37636974-37636993 | MS.gene70984:intron | 25.0% |
| !!! | TAGCATTTATCTAAGGTTTT+AGG | + | chr8.4:37637559-37637578 | MS.gene70984:intron | 25.0% |
| !!! | TATTTTCAAGTTTGTTGAAC+AGG | + | chr8.4:37638969-37638988 | MS.gene70984:intron | 25.0% |
| !!! | TGTGCCTTAAAATTTTTCAA+CGG | + | chr8.4:37637453-37637472 | MS.gene70984:intron | 25.0% |
| AACATGGGAAAGTTTGAATT+AGG | + | chr8.4:37638625-37638644 | MS.gene70984:intron | 30.0% | |
| AATGTAGAACAATGTATTGC+TGG | + | chr8.4:37638291-37638310 | MS.gene70984:intron | 30.0% | |
| AATGTATCAAAGTCTAAACG+AGG | - | chr8.4:37638119-37638138 | None:intergenic | 30.0% | |
| ACAAACCACTAAAATCATCA+AGG | - | chr8.4:37638019-37638038 | None:intergenic | 30.0% | |
| ACTTACTACACTTCTAATGA+CGG | + | chr8.4:37637745-37637764 | MS.gene70984:intron | 30.0% | |
| ATAAATACATTGGATCACAG+AGG | - | chr8.4:37637721-37637740 | None:intergenic | 30.0% | |
| ATATCAGATCTGTGAAACAA+TGG | + | chr8.4:37638244-37638263 | MS.gene70984:intron | 30.0% | |
| ATATCAGTATCGTCAAATAG+CGG | - | chr8.4:37637411-37637430 | None:intergenic | 30.0% | |
| ATCTGTGAAACAATGGTATT+AGG | + | chr8.4:37638251-37638270 | MS.gene70984:intron | 30.0% | |
| CAAATGCCAATATCATTTAC+TGG | + | chr8.4:37638346-37638365 | MS.gene70984:intron | 30.0% | |
| CTAAACAAAAAAACTTAGGG+AGG | + | chr8.4:37637004-37637023 | MS.gene70984:intron | 30.0% | |
| CTAGTAGGATTAAATAGTGT+TGG | + | chr8.4:37637777-37637796 | MS.gene70984:intron | 30.0% | |
| TCAGAAATACAAAATTCGTC+AGG | + | chr8.4:37639093-37639112 | MS.gene70984:CDS | 30.0% | |
| TGAAAGAGAAGAAAGAAAGA+AGG | + | chr8.4:37639122-37639141 | MS.gene70984:CDS | 30.0% | |
| ! | CAAAGCATTTGAAAATGCAT+TGG | + | chr8.4:37636484-37636503 | MS.gene70984:CDS | 30.0% |
| ! | CATTTTTGAATTTACTGGGA+CGG | + | chr8.4:37636978-37636997 | MS.gene70984:intron | 30.0% |
| ! | TCACGTGATGTGATTTTATT+GGG | + | chr8.4:37636925-37636944 | MS.gene70984:intron | 30.0% |
| ! | TGTTTTGCTGGATTTTGTTA+TGG | + | chr8.4:37638192-37638211 | MS.gene70984:intron | 30.0% |
| !! | AACTTCCTTGATGATTTTAG+TGG | + | chr8.4:37638011-37638030 | MS.gene70984:intron | 30.0% |
| !! | GAATTTTGTATTTCTGAGCA+TGG | - | chr8.4:37639090-37639109 | None:intergenic | 30.0% |
| !! | GCAACCATTTTTGAATTTAC+TGG | + | chr8.4:37636973-37636992 | MS.gene70984:intron | 30.0% |
| !! | GTTTTGCTGGATTTTGTTAT+GGG | + | chr8.4:37638193-37638212 | MS.gene70984:intron | 30.0% |
| !!! | ACAGAAGTTTTTTACTAGGT+TGG | + | chr8.4:37638708-37638727 | MS.gene70984:intron | 30.0% |
| !!! | GTTTTGAAGCTTATATGTGT+CGG | + | chr8.4:37637112-37637131 | MS.gene70984:intron | 30.0% |
| AAACAGTCACAGTAGTTAAC+TGG | - | chr8.4:37637501-37637520 | None:intergenic | 35.0% | |
| AAAGAATCATAATCTGGCAG+AGG | - | chr8.4:37636644-37636663 | None:intergenic | 35.0% | |
| AAAGGTAACATCATGTATGC+TGG | - | chr8.4:37639152-37639171 | None:intergenic | 35.0% | |
| AAGCTAACATCAGGAACTAA+AGG | - | chr8.4:37636899-37636918 | None:intergenic | 35.0% | |
| AAGTATATCAAGGTACAGTG+TGG | + | chr8.4:37639036-37639055 | MS.gene70984:CDS | 35.0% | |
| AATCACAATCCCTTCTAACA+TGG | - | chr8.4:37637660-37637679 | None:intergenic | 35.0% | |
| ACTAAGATCCAGCAAAAAGA+TGG | - | chr8.4:37638591-37638610 | None:intergenic | 35.0% | |
| AGAACATCTAACATCGTTGT+AGG | - | chr8.4:37638065-37638084 | None:intergenic | 35.0% | |
| ATCCTTGCACAAATTGTCTA+TGG | - | chr8.4:37638395-37638414 | None:intergenic | 35.0% | |
| ATTGCGAAAAATAGCCATGA+CGG | + | chr8.4:37637149-37637168 | MS.gene70984:intron | 35.0% | |
| CAAAAAACGCTATAGTTGCA+AGG | - | chr8.4:37636817-37636836 | None:intergenic | 35.0% | |
| CAATTCAAATGCATGCTTCA+CGG | - | chr8.4:37637882-37637901 | None:intergenic | 35.0% | |
| CAGTACGTAGCATTTATCTA+AGG | + | chr8.4:37637552-37637571 | MS.gene70984:intron | 35.0% | |
| CGTCATATCCAATCAGTAAA+GGG | + | chr8.4:37637198-37637217 | MS.gene70984:intron | 35.0% | |
| CGTCCCAGTAAATTCAAAAA+TGG | - | chr8.4:37636980-37636999 | None:intergenic | 35.0% | |
| CTTAGATAAATGCTACGTAC+TGG | - | chr8.4:37637554-37637573 | None:intergenic | 35.0% | |
| GACTATTAGTTACTTGTCAG+AGG | - | chr8.4:37638793-37638812 | None:intergenic | 35.0% | |
| GATATCAACCACATTGAATC+TGG | + | chr8.4:37636611-37636630 | MS.gene70984:CDS | 35.0% | |
| GTGAAGCATGCATTTGAATT+GGG | + | chr8.4:37637881-37637900 | MS.gene70984:intron | 35.0% | |
| GTGCTACACTATTAAGTACA+AGG | - | chr8.4:37637328-37637347 | None:intergenic | 35.0% | |
| TAAAGGAGAACCAGATACAA+TGG | - | chr8.4:37637531-37637550 | None:intergenic | 35.0% | |
| TAGTTACTTGTCAGAGGTAA+TGG | - | chr8.4:37638787-37638806 | None:intergenic | 35.0% | |
| TATGGGTTTACTCCAATCTT+TGG | + | chr8.4:37638210-37638229 | MS.gene70984:intron | 35.0% | |
| TTCCATCATCCATGTTAGAA+GGG | + | chr8.4:37637648-37637667 | MS.gene70984:intron | 35.0% | |
| TTGAGCATATGTATGTTGCA+TGG | - | chr8.4:37639497-37639516 | None:intergenic | 35.0% | |
| ! | AGTTCCTGATGTTAGCTTAT+TGG | + | chr8.4:37636901-37636920 | MS.gene70984:intron | 35.0% |
| ! | ATTGTAGCCAGTGTTATTGA+TGG | - | chr8.4:37637282-37637301 | None:intergenic | 35.0% |
| ! | CCTTTACTGATTGGATATGA+CGG | - | chr8.4:37637200-37637219 | None:intergenic | 35.0% |
| ! | CTTCGAGTTCTTATCAAGAT+CGG | + | chr8.4:37636723-37636742 | MS.gene70984:CDS | 35.0% |
| ! | GTCACGTGATGTGATTTTAT+TGG | + | chr8.4:37636924-37636943 | MS.gene70984:intron | 35.0% |
| ! | GTTCCTGATGTTAGCTTATT+GGG | + | chr8.4:37636902-37636921 | MS.gene70984:intron | 35.0% |
| ! | TAAATGCTACGTACTGGTAA+AGG | - | chr8.4:37637548-37637567 | None:intergenic | 35.0% |
| ! | TAGTCCCTATCAGATCTTTT+TGG | + | chr8.4:37638808-37638827 | MS.gene70984:intron | 35.0% |
| ! | TTGTAGCCAGTGTTATTGAT+GGG | - | chr8.4:37637281-37637300 | None:intergenic | 35.0% |
| !! | TTGAACAGGCTATTTCTTCA+AGG | + | chr8.4:37638983-37639002 | MS.gene70984:intron | 35.0% |
| !! | TTTTTACTAGGTTGGAAGCT+CGG | + | chr8.4:37638716-37638735 | MS.gene70984:intron | 35.0% |
| !!! | AAGGGCATCATAGTGTTTTA+TGG | + | chr8.4:37637216-37637235 | MS.gene70984:intron | 35.0% |
| !!! | ATCTCTTCTAAAGTTTTCCC+AGG | - | chr8.4:37636563-37636582 | None:intergenic | 35.0% |
| !!! | CTTGCAACTATAGCGTTTTT+TGG | + | chr8.4:37636815-37636834 | MS.gene70984:intron | 35.0% |
| AAATCCTAGTGGTCCTTGAT+TGG | + | chr8.4:37637818-37637837 | MS.gene70984:intron | 40.0% | |
| AAGACCATAATCCATGTCTC+CGG | - | chr8.4:37639413-37639432 | None:intergenic | 40.0% | |
| AATATCATTTACTGGCGTGG+CGG | + | chr8.4:37638354-37638373 | MS.gene70984:intron | 40.0% | |
| AATGTTGCAGTGTGTTACAC+TGG | + | chr8.4:37638167-37638186 | MS.gene70984:intron | 40.0% | |
| AGAGATTAAGCGTCACTATG+TGG | + | chr8.4:37636577-37636596 | MS.gene70984:CDS | 40.0% | |
| AGTGTAACACACTGCAACAT+TGG | - | chr8.4:37638168-37638187 | None:intergenic | 40.0% | |
| ATCCCTTCTAACATGGATGA+TGG | - | chr8.4:37637653-37637672 | None:intergenic | 40.0% | |
| CACCATAGACAATTTGTGCA+AGG | + | chr8.4:37638390-37638409 | MS.gene70984:intron | 40.0% | |
| CCGTCATATCCAATCAGTAA+AGG | + | chr8.4:37637197-37637216 | MS.gene70984:intron | 40.0% | |
| CGTGAAGCATGCATTTGAAT+TGG | + | chr8.4:37637880-37637899 | MS.gene70984:intron | 40.0% | |
| CTATGATGCCCTTTACTGAT+TGG | - | chr8.4:37637209-37637228 | None:intergenic | 40.0% | |
| CTTGCACAAATTGTCTATGG+TGG | - | chr8.4:37638392-37638411 | None:intergenic | 40.0% | |
| GCACAAAACCAGATTCAATG+TGG | - | chr8.4:37636622-37636641 | None:intergenic | 40.0% | |
| GTTCCATCATCCATGTTAGA+AGG | + | chr8.4:37637647-37637666 | MS.gene70984:intron | 40.0% | |
| TCCAAATGACCTACCAATCA+AGG | - | chr8.4:37637834-37637853 | None:intergenic | 40.0% | |
| TCCTTGATTGGTAGGTCATT+TGG | + | chr8.4:37637830-37637849 | MS.gene70984:intron | 40.0% | |
| TCTTATCAAGATCGGCGAAA+GGG | + | chr8.4:37636731-37636750 | MS.gene70984:CDS | 40.0% | |
| TGACCCAATAAGCTAACATC+AGG | - | chr8.4:37636908-37636927 | None:intergenic | 40.0% | |
| TGTTGCATGGCATATGTCAT+AGG | - | chr8.4:37639484-37639503 | None:intergenic | 40.0% | |
| TTCTTATCAAGATCGGCGAA+AGG | + | chr8.4:37636730-37636749 | MS.gene70984:CDS | 40.0% | |
| TTGATTGGTAGGTCATTTGG+AGG | + | chr8.4:37637833-37637852 | MS.gene70984:intron | 40.0% | |
| ! | ATAGTGTTGGGTAAAGCGTT+TGG | + | chr8.4:37637790-37637809 | MS.gene70984:intron | 40.0% |
| ! | GGATTGCGGTAACAGATTTT+TGG | + | chr8.4:37637170-37637189 | MS.gene70984:intron | 40.0% |
| ! | GGCATCATAGTGTTTTATGG+TGG | + | chr8.4:37637219-37637238 | MS.gene70984:intron | 40.0% |
| ! | TAGTGTTGGGTAAAGCGTTT+GGG | + | chr8.4:37637791-37637810 | MS.gene70984:intron | 40.0% |
| ! | TGTAGCCAGTGTTATTGATG+GGG | - | chr8.4:37637280-37637299 | None:intergenic | 40.0% |
| !! | AAAATAGCCATGACGGATTG+CGG | + | chr8.4:37637156-37637175 | MS.gene70984:intron | 40.0% |
| !! | ATGTGTCGGTGTTACAATTG+CGG | + | chr8.4:37637126-37637145 | MS.gene70984:intron | 40.0% |
| !! | GTTACACTGGATTGTTTTGC+TGG | + | chr8.4:37638180-37638199 | MS.gene70984:intron | 40.0% |
| !! | TTTCTGAGACAGTTATGCCA+GGG | + | chr8.4:37639440-37639459 | MS.gene70984:CDS | 40.0% |
| !!! | GGCTGCAATGCTGTTTTTTA+CGG | + | chr8.4:37638436-37638455 | MS.gene70984:intron | 40.0% |
| !!! | TCAAGAGTTTTGATTCCAGC+AGG | - | chr8.4:37639283-37639302 | None:intergenic | 40.0% |
| !!! | TGCAATGCTGTTTTTTACGG+CGG | + | chr8.4:37638439-37638458 | MS.gene70984:intron | 40.0% |
| AAGAGCTCAACAAAGCGTAC+TGG | + | chr8.4:37636668-37636687 | MS.gene70984:CDS | 45.0% | |
| AATTCTGCTGCAAGTTCTGC+TGG | + | chr8.4:37639226-37639245 | MS.gene70984:CDS | 45.0% | |
| AGACCATAATCCATGTCTCC+GGG | - | chr8.4:37639412-37639431 | None:intergenic | 45.0% | |
| AGCAGAATTGCTTGCTTGAC+CGG | - | chr8.4:37639215-37639234 | None:intergenic | 45.0% | |
| AGCTGTGAAAAGGGGAACTA+AGG | + | chr8.4:37636700-37636719 | MS.gene70984:CDS | 45.0% | |
| AGGCACAGCTAACATAGCTT+AGG | - | chr8.4:37637440-37637459 | None:intergenic | 45.0% | |
| CTATGTTCATCTTCCGTCCA+AGG | - | chr8.4:37636761-37636780 | None:intergenic | 45.0% | |
| CTTGGACGGAAGATGAACAT+AGG | + | chr8.4:37636759-37636778 | MS.gene70984:CDS | 45.0% | |
| CTTTCCCCCATCAATAACAC+TGG | + | chr8.4:37637272-37637291 | MS.gene70984:intron | 45.0% | |
| GATACAACTGGTCCTCCTAT+AGG | - | chr8.4:37639358-37639377 | None:intergenic | 45.0% | |
| GCCAATATCATTTACTGGCG+TGG | + | chr8.4:37638351-37638370 | MS.gene70984:intron | 45.0% | |
| GCCACGCCAGTAAATGATAT+TGG | - | chr8.4:37638355-37638374 | None:intergenic | 45.0% | |
| GGCATAACTGTCTCAGAAAC+TGG | - | chr8.4:37639439-37639458 | None:intergenic | 45.0% | |
| GTAACACACTGCAACATTGG+AGG | - | chr8.4:37638165-37638184 | None:intergenic | 45.0% | |
| GTACCAACTGCAGATACAAC+TGG | - | chr8.4:37639370-37639389 | None:intergenic | 45.0% | |
| GTGACTGGCGAAGTATATCA+AGG | + | chr8.4:37639026-37639045 | MS.gene70984:CDS | 45.0% | |
| TGAAGGAGGAGCTGTGAAAA+GGG | + | chr8.4:37636691-37636710 | MS.gene70984:CDS | 45.0% | |
| TTGCTTGCTTGACCGGTAAT+TGG | - | chr8.4:37639208-37639227 | None:intergenic | 45.0% | |
| ! | ACGAGTCTCCATCTTTTTGC+TGG | + | chr8.4:37638580-37638599 | MS.gene70984:intron | 45.0% |
| ! | AGTGTTGGGTAAAGCGTTTG+GGG | + | chr8.4:37637792-37637811 | MS.gene70984:intron | 45.0% |
| ! | CCAGTGAATTTTACTGCTCC+CGG | + | chr8.4:37639391-37639410 | MS.gene70984:CDS | 45.0% |
| ! | GGAGACATGGATTATGGTCT+TGG | + | chr8.4:37639412-37639431 | MS.gene70984:CDS | 45.0% |
| ! | GTAGCCAGTGTTATTGATGG+GGG | - | chr8.4:37637279-37637298 | None:intergenic | 45.0% |
| ! | GTTTGGGGTTCAAATCCTAG+TGG | + | chr8.4:37637807-37637826 | MS.gene70984:intron | 45.0% |
| ! | TCAACAAAGCGTACTGGTGA+AGG | + | chr8.4:37636674-37636693 | MS.gene70984:CDS | 45.0% |
| ! | TGACGGTTGACTCAACTAGT+AGG | + | chr8.4:37637762-37637781 | MS.gene70984:intron | 45.0% |
| ! | TTGTGCAAGGATGCTTGCTA+TGG | + | chr8.4:37638403-37638422 | MS.gene70984:intron | 45.0% |
| !! | GTTTCTGAGACAGTTATGCC+AGG | + | chr8.4:37639439-37639458 | MS.gene70984:CDS | 45.0% |
| !! | TGTGCAAGGATGCTTGCTAT+GGG | + | chr8.4:37638404-37638423 | MS.gene70984:intron | 45.0% |
| !! | TTCTGAGACAGTTATGCCAG+GGG | + | chr8.4:37639441-37639460 | MS.gene70984:CDS | 45.0% |
| !!! | AGAGTTTTGATTCCAGCAGG+TGG | - | chr8.4:37639280-37639299 | None:intergenic | 45.0% |
| !!! | GAGTTTTGATTCCAGCAGGT+GGG | - | chr8.4:37639279-37639298 | None:intergenic | 45.0% |
| AAATGGGTAGCAGCTGTGAG+TGG | + | chr8.4:37636447-37636466 | MS.gene70984:CDS | 50.0% | |
| CAGTTTCGTCGACGTCAGAA+TGG | - | chr8.4:37638471-37638490 | None:intergenic | 50.0% | |
| CCGGGAGCAGTAAAATTCAC+TGG | - | chr8.4:37639394-37639413 | None:intergenic | 50.0% | |
| CCTACCAATCAAGGACCACT+AGG | - | chr8.4:37637825-37637844 | None:intergenic | 50.0% | |
| CCTAGTGGTCCTTGATTGGT+AGG | + | chr8.4:37637822-37637841 | MS.gene70984:intron | 50.0% | |
| GAAGGAGGAGCTGTGAAAAG+GGG | + | chr8.4:37636692-37636711 | MS.gene70984:CDS | 50.0% | |
| GAATTATCCCGAGGACGTTG+TGG | + | chr8.4:37636508-37636527 | MS.gene70984:CDS | 50.0% | |
| GCACCTCAAGGACCAATTAC+CGG | + | chr8.4:37639193-37639212 | MS.gene70984:CDS | 50.0% | |
| GGACCAGTTGTATCTGCAGT+TGG | + | chr8.4:37639364-37639383 | MS.gene70984:CDS | 50.0% | |
| GGAGACATTTCAGCACCTCA+AGG | + | chr8.4:37639181-37639200 | MS.gene70984:CDS | 50.0% | |
| GGATCGATGGGAGAAAATCG+CGG | + | chr8.4:37636529-37636548 | MS.gene70984:CDS | 50.0% | |
| GTCATAGGACCCAGGTTCAT+TGG | - | chr8.4:37639469-37639488 | None:intergenic | 50.0% | |
| GTGAAGGAGGAGCTGTGAAA+AGG | + | chr8.4:37636690-37636709 | MS.gene70984:CDS | 50.0% | |
| TCGTCAAATAGCGGCTGTAG+TGG | - | chr8.4:37637402-37637421 | None:intergenic | 50.0% | |
| TCTGTTACCGCAATCCGTCA+TGG | - | chr8.4:37637166-37637185 | None:intergenic | 50.0% | |
| TGACCGGTAATTGGTCCTTG+AGG | - | chr8.4:37639199-37639218 | None:intergenic | 50.0% | |
| TGACGTCGACGAAACTGATC+AGG | + | chr8.4:37638474-37638493 | MS.gene70984:intron | 50.0% | |
| TGGCATATGTCATAGGACCC+AGG | - | chr8.4:37639477-37639496 | None:intergenic | 50.0% | |
| ! | ACAAAGCGTACTGGTGAAGG+AGG | + | chr8.4:37636677-37636696 | MS.gene70984:CDS | 50.0% |
| ! | TGCATTGGCGAATTATCCCG+AGG | + | chr8.4:37636499-37636518 | MS.gene70984:CDS | 50.0% |
| ! | TTTTACTGCTCCCGGAGACA+TGG | + | chr8.4:37639399-37639418 | MS.gene70984:CDS | 50.0% |
| !! | CAGGCTATTTCTTCAAGGCC+TGG | + | chr8.4:37638988-37639007 | MS.gene70984:intron | 50.0% |
| !! | GCATGGCTTGCTACTTGTGT+AGG | - | chr8.4:37639073-37639092 | None:intergenic | 50.0% |
| !! | GTGCAAGGATGCTTGCTATG+GGG | + | chr8.4:37638405-37638424 | MS.gene70984:intron | 50.0% |
| !! | TGCAAGGATGCTTGCTATGG+GGG | + | chr8.4:37638406-37638425 | MS.gene70984:intron | 50.0% |
| AAAATCGCGGCTGATGTGCC+TGG | + | chr8.4:37636542-37636561 | MS.gene70984:CDS | 55.0% | |
| AAATCGCGGCTGATGTGCCT+GGG | + | chr8.4:37636543-37636562 | MS.gene70984:CDS | 55.0% | |
| AAGGCCTGGAGAACCATGGA+TGG | + | chr8.4:37639002-37639021 | MS.gene70984:CDS | 55.0% | |
| AGAACCATGGATGGGGTGAC+TGG | + | chr8.4:37639011-37639030 | MS.gene70984:CDS | 55.0% | |
| AGCGTGTATTCCAGCAGGTG+GGG | - | chr8.4:37639317-37639336 | None:intergenic | 55.0% | |
| AGGCCTGGAGAACCATGGAT+GGG | + | chr8.4:37639003-37639022 | MS.gene70984:CDS | 55.0% | |
| ATACACGCTGCTCCTGGGAT+CGG | + | chr8.4:37639328-37639347 | MS.gene70984:CDS | 55.0% | |
| CAGCGTGTATTCCAGCAGGT+GGG | - | chr8.4:37639318-37639337 | None:intergenic | 55.0% | |
| CATCGATCCACAACGTCCTC+GGG | - | chr8.4:37636518-37636537 | None:intergenic | 55.0% | |
| CCATCGATCCACAACGTCCT+CGG | - | chr8.4:37636519-37636538 | None:intergenic | 55.0% | |
| CGAGGACGTTGTGGATCGAT+GGG | + | chr8.4:37636517-37636536 | MS.gene70984:CDS | 55.0% | |
| CTGGAATACACGCTGCTCCT+GGG | + | chr8.4:37639323-37639342 | MS.gene70984:CDS | 55.0% | |
| CTTCAAGGCCTGGAGAACCA+TGG | + | chr8.4:37638998-37639017 | MS.gene70984:CDS | 55.0% | |
| TTGATTCCAGCAGGTGGGAC+TGG | - | chr8.4:37639274-37639293 | None:intergenic | 55.0% | |
| ! | GCTCCCGGAGACATGGATTA+TGG | + | chr8.4:37639406-37639425 | MS.gene70984:CDS | 55.0% |
| ! | TGGGACTGGAGGAGCTTGTT+CGG | - | chr8.4:37639260-37639279 | None:intergenic | 55.0% |
| !! | ATCGGCGAAAGGGTGTTCCT+TGG | + | chr8.4:37636741-37636760 | MS.gene70984:CDS | 55.0% |
| !! | CCAGGGGTACCAATGAACCT+GGG | + | chr8.4:37639457-37639476 | MS.gene70984:CDS | 55.0% |
| !! | GCGAAAGGGTGTTCCTTGGA+CGG | + | chr8.4:37636745-37636764 | MS.gene70984:CDS | 55.0% |
| !! | GCTTGCTATGGGGGTGCTAT+CGG | + | chr8.4:37638415-37638434 | MS.gene70984:intron | 55.0% |
| ATTCCAGCAGGTGGGACTGG+AGG | - | chr8.4:37639271-37639290 | None:intergenic | 60.0% | |
| CACCCCATCCATGGTTCTCC+AGG | - | chr8.4:37639009-37639028 | None:intergenic | 60.0% | |
| CCCAGGTTCATTGGTACCCC+TGG | - | chr8.4:37639460-37639479 | None:intergenic | 60.0% | |
| CCGAGGACGTTGTGGATCGA+TGG | + | chr8.4:37636516-37636535 | MS.gene70984:CDS | 60.0% | |
| CCTATAGGTTGCCCGATCCC+AGG | - | chr8.4:37639343-37639362 | None:intergenic | 60.0% | |
| CCTGGGATCGGGCAACCTAT+AGG | + | chr8.4:37639340-37639359 | MS.gene70984:CDS | 60.0% | |
| GCAGCGTGTATTCCAGCAGG+TGG | - | chr8.4:37639319-37639338 | None:intergenic | 60.0% | |
| GCTGGAATACACGCTGCTCC+TGG | + | chr8.4:37639322-37639341 | MS.gene70984:CDS | 60.0% | |
| GGAGCAGCGTGTATTCCAGC+AGG | - | chr8.4:37639322-37639341 | None:intergenic | 60.0% | |
| GGCCTGGAGAACCATGGATG+GGG | + | chr8.4:37639004-37639023 | MS.gene70984:CDS | 60.0% | |
| GGGATCGGGCAACCTATAGG+AGG | + | chr8.4:37639343-37639362 | MS.gene70984:CDS | 60.0% | |
| TACACGCTGCTCCTGGGATC+GGG | + | chr8.4:37639329-37639348 | MS.gene70984:CDS | 60.0% | |
| TGTATTCCAGCAGGTGGGGC+TGG | - | chr8.4:37639313-37639332 | None:intergenic | 60.0% | |
| TTCGCCAGTCACCCCATCCA+TGG | - | chr8.4:37639018-37639037 | None:intergenic | 60.0% | |
| !! | GCCAGGGGTACCAATGAACC+TGG | + | chr8.4:37639456-37639475 | MS.gene70984:CDS | 60.0% |
| AATCCTCCAGCCCCACCTGC+TGG | + | chr8.4:37639304-37639323 | MS.gene70984:CDS | 65.0% | |
| ATTCCAGCAGGTGGGGCTGG+AGG | - | chr8.4:37639310-37639329 | None:intergenic | 65.0% | |
| GCTCCTCCAGTCCCACCTGC+TGG | + | chr8.4:37639265-37639284 | MS.gene70984:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 37636440 | 37639522 | 37636440 | ID=MS.gene70984 |
| chr8.4 | mRNA | 37636440 | 37639522 | 37636440 | ID=MS.gene70984.t1;Parent=MS.gene70984 |
| chr8.4 | exon | 37636440 | 37636780 | 37636440 | ID=MS.gene70984.t1.exon1;Parent=MS.gene70984.t1 |
| chr8.4 | CDS | 37636440 | 37636780 | 37636440 | ID=cds.MS.gene70984.t1;Parent=MS.gene70984.t1 |
| chr8.4 | exon | 37638991 | 37639522 | 37638991 | ID=MS.gene70984.t1.exon2;Parent=MS.gene70984.t1 |
| chr8.4 | CDS | 37638991 | 37639522 | 37638991 | ID=cds.MS.gene70984.t1;Parent=MS.gene70984.t1 |
| Gene Sequence |
| Protein sequence |
