Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71194.t1 | XP_024642224.1 | 48.9 | 417 | 37 | 3 | 179 | 421 | 5 | 419 | 3.30E-97 | 365.9 |
MS.gene71194.t1 | XP_024642224.1 | 52.7 | 74 | 32 | 2 | 384 | 454 | 587 | 660 | 1.10E-07 | 68.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71194.t1 | Q9SSQ4 | 40.2 | 122 | 71 | 1 | 316 | 435 | 356 | 477 | 3.4e-18 | 94.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71194.t1 | A0A2Z6M8U9 | 43.7 | 414 | 59 | 3 | 178 | 421 | 4 | 413 | 2.2e-82 | 316.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene71194.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71194.t1 | MTR_0856s0010 | 68.354 | 158 | 25 | 2 | 179 | 313 | 5 | 160 | 9.72e-67 | 214 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71194.t1 | AT1G52520 | 41.284 | 109 | 64 | 0 | 316 | 424 | 356 | 464 | 1.30e-19 | 93.2 |
MS.gene71194.t1 | AT4G38180 | 41.818 | 110 | 63 | 1 | 313 | 421 | 356 | 465 | 1.28e-18 | 90.5 |
MS.gene71194.t1 | AT2G27110 | 37.615 | 109 | 67 | 1 | 315 | 422 | 305 | 413 | 5.90e-16 | 82.0 |
MS.gene71194.t1 | AT2G27110 | 37.615 | 109 | 67 | 1 | 315 | 422 | 305 | 413 | 5.90e-16 | 82.0 |
MS.gene71194.t1 | AT2G27110 | 37.615 | 109 | 67 | 1 | 315 | 422 | 160 | 268 | 7.81e-16 | 81.3 |
MS.gene71194.t1 | AT1G80010 | 30.357 | 112 | 78 | 0 | 315 | 426 | 380 | 491 | 6.05e-14 | 75.5 |
MS.gene71194.t1 | AT3G06250 | 33.962 | 106 | 68 | 1 | 316 | 421 | 435 | 538 | 9.25e-14 | 74.7 |
MS.gene71194.t1 | AT3G06250 | 33.962 | 106 | 68 | 1 | 316 | 421 | 435 | 538 | 9.25e-14 | 74.7 |
MS.gene71194.t1 | AT3G06250 | 33.962 | 106 | 68 | 1 | 316 | 421 | 435 | 538 | 9.25e-14 | 74.7 |
MS.gene71194.t1 | AT5G18960 | 34.906 | 106 | 67 | 1 | 316 | 421 | 459 | 562 | 2.86e-13 | 73.2 |
MS.gene71194.t1 | AT5G18960 | 34.906 | 106 | 67 | 1 | 316 | 421 | 459 | 562 | 2.86e-13 | 73.2 |
MS.gene71194.t1 | AT2G32250 | 33.333 | 108 | 67 | 2 | 316 | 422 | 279 | 382 | 7.78e-13 | 72.0 |
MS.gene71194.t1 | AT2G32250 | 33.333 | 108 | 67 | 2 | 316 | 422 | 279 | 382 | 7.78e-13 | 72.0 |
MS.gene71194.t1 | AT2G32250 | 33.333 | 108 | 67 | 2 | 316 | 422 | 279 | 382 | 8.27e-13 | 72.0 |
MS.gene71194.t1 | AT2G32250 | 33.333 | 108 | 67 | 2 | 316 | 422 | 279 | 382 | 8.27e-13 | 72.0 |
MS.gene71194.t1 | AT2G32250 | 33.333 | 108 | 67 | 2 | 316 | 422 | 279 | 382 | 8.27e-13 | 72.0 |
MS.gene71194.t1 | AT4G15090 | 32.407 | 108 | 70 | 2 | 316 | 421 | 335 | 441 | 8.31e-13 | 72.0 |
MS.gene71194.t1 | AT4G15090 | 32.407 | 108 | 70 | 2 | 316 | 421 | 335 | 441 | 8.31e-13 | 72.0 |
MS.gene71194.t1 | AT4G15090 | 32.407 | 108 | 70 | 2 | 316 | 421 | 335 | 441 | 8.31e-13 | 72.0 |
MS.gene71194.t1 | AT4G15090 | 32.407 | 108 | 70 | 2 | 316 | 421 | 335 | 441 | 8.31e-13 | 72.0 |
MS.gene71194.t1 | AT4G15090 | 32.407 | 108 | 70 | 2 | 316 | 421 | 335 | 441 | 8.31e-13 | 72.0 |
MS.gene71194.t1 | AT2G32250 | 33.333 | 108 | 67 | 2 | 316 | 422 | 238 | 341 | 9.46e-13 | 71.6 |
MS.gene71194.t1 | AT2G32250 | 33.333 | 108 | 67 | 2 | 316 | 422 | 238 | 341 | 9.48e-13 | 71.6 |
MS.gene71194.t1 | AT2G32250 | 33.333 | 108 | 67 | 2 | 316 | 422 | 279 | 382 | 9.62e-13 | 71.6 |
MS.gene71194.t1 | AT4G19990 | 31.068 | 103 | 68 | 2 | 316 | 416 | 283 | 384 | 4.08e-11 | 66.2 |
MS.gene71194.t1 | AT4G19990 | 31.068 | 103 | 68 | 2 | 316 | 416 | 283 | 384 | 4.08e-11 | 66.2 |
MS.gene71194.t1 | AT4G19990 | 31.068 | 103 | 68 | 2 | 316 | 416 | 297 | 398 | 4.47e-11 | 66.2 |
MS.gene71194.t1 | AT4G19990 | 31.068 | 103 | 68 | 2 | 316 | 416 | 283 | 384 | 4.50e-11 | 66.2 |
MS.gene71194.t1 | AT4G19990 | 31.068 | 103 | 68 | 2 | 316 | 416 | 226 | 327 | 4.66e-11 | 66.2 |
MS.gene71194.t1 | AT4G19990 | 31.068 | 103 | 68 | 2 | 316 | 416 | 283 | 384 | 5.04e-11 | 66.2 |
MS.gene71194.t1 | AT4G19990 | 31.068 | 103 | 68 | 2 | 316 | 416 | 283 | 384 | 5.04e-11 | 66.2 |
MS.gene71194.t1 | AT1G76320 | 33.981 | 103 | 65 | 2 | 316 | 416 | 272 | 373 | 5.91e-11 | 65.9 |
MS.gene71194.t1 | AT1G76320 | 33.981 | 103 | 65 | 2 | 316 | 416 | 272 | 373 | 5.91e-11 | 65.9 |
MS.gene71194.t1 | AT1G76320 | 33.981 | 103 | 65 | 2 | 316 | 416 | 272 | 373 | 6.05e-11 | 65.9 |
MS.gene71194.t1 | AT1G76320 | 33.981 | 103 | 65 | 2 | 316 | 416 | 272 | 373 | 6.34e-11 | 65.9 |
Find 140 sgRNAs with CRISPR-Local
Find 396 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGAGGCCTGTTTGTGATTTC+TGG | 0.137382 | 8.3:+36254221 | MS.gene71194:CDS |
CTCGCCACAGGTGGTGTTTA+TGG | 0.192717 | 8.3:+36255500 | MS.gene71194:CDS |
TTGAACAACCTTGCCTTTCT+AGG | 0.211285 | 8.3:-36254893 | None:intergenic |
GCTACAACTGAAAATGTTAT+AGG | 0.278864 | 8.3:+36256455 | MS.gene71194:CDS |
CTCTGTTTGGATCGTTTACT+TGG | 0.304558 | 8.3:-36256641 | None:intergenic |
ATTGTGGCAGTCCTGTTATT+TGG | 0.321085 | 8.3:+36257447 | MS.gene71194:intron |
TCCTCTGCCATCACTCTGTT+TGG | 0.325597 | 8.3:-36256654 | None:intergenic |
GTGGATATGGTGATTATAAA+AGG | 0.333910 | 8.3:+36255554 | MS.gene71194:CDS |
ATTTGTCACTCTTTCAGAAT+TGG | 0.339365 | 8.3:-36256773 | None:intergenic |
AAACTTTCAATACCATTGTT+TGG | 0.340625 | 8.3:-36256500 | None:intergenic |
TGAATTTCAATACCATTGTT+TGG | 0.340625 | 8.3:-36256539 | None:intergenic |
TGTATAATGAACGTCATAGA+TGG | 0.342508 | 8.3:+36255695 | MS.gene71194:CDS |
AAGGGGATATGTTGTTATTA+CGG | 0.344415 | 8.3:-36252218 | None:intergenic |
CAAACAGCATACCAGAAAAC+AGG | 0.354470 | 8.3:-36254262 | None:intergenic |
GTTCAAGGCCAACAAGAAAA+TGG | 0.356488 | 8.3:+36254910 | MS.gene71194:CDS |
GACAAGACGGTGAGAGGAAG+AGG | 0.363683 | 8.3:-36252268 | None:intergenic |
CTGATCTATAACAGCAACTA+TGG | 0.369006 | 8.3:-36252308 | None:intergenic |
AGGGGATATGTTGTTATTAC+GGG | 0.369127 | 8.3:-36252217 | None:intergenic |
GAGACGGCTGGTTGGTGTCC+TGG | 0.373439 | 8.3:+36257484 | MS.gene71194:CDS |
TGAAATTCACAGTCCATTGC+GGG | 0.380283 | 8.3:+36256553 | MS.gene71194:CDS |
CGATGAAAGAAAGAGTATAA+AGG | 0.381161 | 8.3:-36252237 | None:intergenic |
GGCTGGTTGGTGTCCTGGAC+CGG | 0.384116 | 8.3:+36257489 | MS.gene71194:CDS |
TGTATCAAATTGAAAGAAGA+TGG | 0.385199 | 8.3:+36254821 | MS.gene71194:CDS |
CAGCATAATCATTGGTTGAC+TGG | 0.392212 | 8.3:+36255670 | MS.gene71194:CDS |
GAAGGGAGAGAGGACTGAAA+TGG | 0.399322 | 8.3:-36252136 | None:intergenic |
GATGAAAGAAAGAGTATAAA+GGG | 0.407700 | 8.3:-36252236 | None:intergenic |
AATGGTATTGAAAGTTTCAA+TGG | 0.407838 | 8.3:+36256506 | MS.gene71194:CDS |
CACCACCTGTGGCGAGTTGT+AGG | 0.411093 | 8.3:-36255493 | None:intergenic |
TAAACCGATGTAAAATTTCA+TGG | 0.416870 | 8.3:-36256409 | None:intergenic |
CAATGCACCAACCAAATAAC+AGG | 0.420201 | 8.3:-36257458 | None:intergenic |
GGTGAGAGGAAGAGGGGAGA+GGG | 0.427382 | 8.3:-36252260 | None:intergenic |
TGGTCAGTCACAATACCAAC+AGG | 0.431128 | 8.3:-36255433 | None:intergenic |
ACGGGGCAGATTGAAGGAAA+TGG | 0.431645 | 8.3:+36252408 | MS.gene71194:CDS |
TTGAGCTTCAGCATAATCAT+TGG | 0.432152 | 8.3:+36255662 | MS.gene71194:CDS |
TGAACAACCTTGCCTTTCTA+GGG | 0.439320 | 8.3:-36254892 | None:intergenic |
CGGGGCAGATTGAAGGAAAT+GGG | 0.441136 | 8.3:+36252409 | MS.gene71194:CDS |
AGAAAATGGACTTGCATGTA+AGG | 0.444990 | 8.3:+36254924 | MS.gene71194:CDS |
TTGCGCTCTCAAACCGGTCC+AGG | 0.452161 | 8.3:-36257502 | None:intergenic |
CGGTGAGAGGAAGAGGGGAG+AGG | 0.452445 | 8.3:-36252261 | None:intergenic |
CTGTTATTTGGTTGGTGCAT+TGG | 0.453349 | 8.3:+36257459 | MS.gene71194:CDS |
CGACGATGGATGGCGGTGGA+TGG | 0.457138 | 8.3:-36252177 | None:intergenic |
AATGTTATAGGAAGTTTCAA+TGG | 0.461704 | 8.3:+36256467 | MS.gene71194:CDS |
CAACCTTGCCTTTCTAGGGC+TGG | 0.475224 | 8.3:-36254888 | None:intergenic |
GGTGCATTGGTCGAGACGGC+TGG | 0.478668 | 8.3:+36257472 | MS.gene71194:CDS |
AGGATGACGGCGATGAAAGA+AGG | 0.480012 | 8.3:-36252154 | None:intergenic |
TTGTAGACACGTCCGACAAT+GGG | 0.482433 | 8.3:+36254776 | MS.gene71194:intron |
AATTTGATACAAATCTTAGC+AGG | 0.483019 | 8.3:-36254809 | None:intergenic |
CCTTTACGTTTAACCCGCAA+TGG | 0.484773 | 8.3:-36256566 | None:intergenic |
TATAGCGTCGCAACCGAGAT+GGG | 0.485569 | 8.3:-36253374 | None:intergenic |
TTCGGTCACTCCACCCATCT+CGG | 0.485968 | 8.3:+36253361 | MS.gene71194:CDS |
TAGAAAGGCAAGGTTGTTCA+AGG | 0.489258 | 8.3:+36254895 | MS.gene71194:CDS |
TGGCAGTCCTGTTATTTGGT+TGG | 0.490635 | 8.3:+36257451 | MS.gene71194:intron |
GATTAAGTTTGTAATGAAAG+AGG | 0.492217 | 8.3:+36255576 | MS.gene71194:CDS |
AGCATAATCATTGGTTGACT+GGG | 0.493036 | 8.3:+36255671 | MS.gene71194:CDS |
AGAGTTTGAAGACACATCTA+AGG | 0.494136 | 8.3:+36256382 | MS.gene71194:CDS |
ATTGTGACGGGGCAGATTGA+AGG | 0.494637 | 8.3:+36252402 | MS.gene71194:CDS |
TACGGGAGAGGAACGGAGAT+CGG | 0.495441 | 8.3:-36252200 | None:intergenic |
CGGAGATCGGCGACGATGGA+TGG | 0.496362 | 8.3:-36252187 | None:intergenic |
TCATCATACCAGCCCTAGAA+AGG | 0.496553 | 8.3:+36254880 | MS.gene71194:CDS |
CACAATACATGAAAACAAAG+AGG | 0.499237 | 8.3:-36252385 | None:intergenic |
AAGATTAGAACATCGAGAAA+AGG | 0.502639 | 8.3:+36254677 | MS.gene71194:CDS |
ATATAGCGTCGCAACCGAGA+TGG | 0.504515 | 8.3:-36253375 | None:intergenic |
TCAAATGTTGTTGTGGATTG+TGG | 0.509257 | 8.3:+36254497 | MS.gene71194:CDS |
CTGGTATGATGAGAATGATC+AGG | 0.514347 | 8.3:-36254869 | None:intergenic |
GCCTGTTTGTGATTTCTGGT+CGG | 0.515165 | 8.3:+36254225 | MS.gene71194:CDS |
GGTCTGTTGCGCTCTCAAAC+CGG | 0.518535 | 8.3:-36257508 | None:intergenic |
CATCGAGAAAAGGACGAGAT+GGG | 0.520186 | 8.3:+36254687 | MS.gene71194:CDS |
ATATGTTGTTATTACGGGAG+AGG | 0.520922 | 8.3:-36252212 | None:intergenic |
AAATAATATCTTAACAAGGT+TGG | 0.525915 | 8.3:-36255721 | None:intergenic |
GCCGACCAGAAATCACAAAC+AGG | 0.527347 | 8.3:-36254226 | None:intergenic |
AAGAAGATGATGATGCATGC+TGG | 0.530084 | 8.3:+36254567 | MS.gene71194:CDS |
GATGGTGAAGGTATAGAAGT+TGG | 0.532672 | 8.3:+36254527 | MS.gene71194:CDS |
ACATCGAGAAAAGGACGAGA+TGG | 0.535829 | 8.3:+36254686 | MS.gene71194:CDS |
TGGGGAAACAAGTGTTGAAA+CGG | 0.546619 | 8.3:+36252436 | MS.gene71194:CDS |
GAAACGGCGGTGTACACAGT+GGG | 0.548646 | 8.3:+36252452 | MS.gene71194:CDS |
GGATAGTTCAAATGTTGTTG+TGG | 0.550233 | 8.3:+36254490 | MS.gene71194:intron |
ATTGTAGACACGTCCGACAA+TGG | 0.552348 | 8.3:+36254775 | MS.gene71194:intron |
ACCACCTGTGGCGAGTTGTA+GGG | 0.557062 | 8.3:-36255492 | None:intergenic |
GGTGATGACAAGACGGTGAG+AGG | 0.559597 | 8.3:-36252274 | None:intergenic |
GTGGATTGTGGTAGTACTGA+TGG | 0.559597 | 8.3:+36254509 | MS.gene71194:CDS |
ATTGAAATCAATGATGATGC+AGG | 0.561814 | 8.3:+36254953 | MS.gene71194:CDS |
CCATTGCGGGTTAAACGTAA+AGG | 0.562059 | 8.3:+36256566 | MS.gene71194:CDS |
TCGGCGACGATGGATGGCGG+TGG | 0.567661 | 8.3:-36252181 | None:intergenic |
CATTGGTCGAGACGGCTGGT+TGG | 0.568772 | 8.3:+36257476 | MS.gene71194:CDS |
TTCAGTTGTAGCATTCCTGG+TGG | 0.569900 | 8.3:-36256444 | None:intergenic |
GGAACGGAGATCGGCGACGA+TGG | 0.570861 | 8.3:-36252191 | None:intergenic |
GGAGGTCTGTGCTGTTTGTG+AGG | 0.571618 | 8.3:+36254203 | MS.gene71194:CDS |
GTATAATGAACGTCATAGAT+GGG | 0.575289 | 8.3:+36255696 | MS.gene71194:CDS |
CGATGGATGGCGGTGGATGG+AGG | 0.575871 | 8.3:-36252174 | None:intergenic |
ACAAGACGGTGAGAGGAAGA+GGG | 0.577384 | 8.3:-36252267 | None:intergenic |
GGATGACGGCGATGAAAGAA+GGG | 0.577513 | 8.3:-36252153 | None:intergenic |
TATTGTGACTGACCAATGTA+AGG | 0.579574 | 8.3:+36255441 | MS.gene71194:CDS |
AAACAGCATACCAGAAAACA+GGG | 0.579907 | 8.3:-36254261 | None:intergenic |
ACAATACATGAAAACAAAGA+GGG | 0.580195 | 8.3:-36252384 | None:intergenic |
TTGAAATTCACAGTCCATTG+CGG | 0.581090 | 8.3:+36256552 | MS.gene71194:CDS |
AGAAGATGATGATGCATGCT+GGG | 0.582547 | 8.3:+36254568 | MS.gene71194:CDS |
TGGCGGTGGATGGAGGATGA+CGG | 0.587946 | 8.3:-36252167 | None:intergenic |
ATCGAGAAAAGGACGAGATG+GGG | 0.592032 | 8.3:+36254688 | MS.gene71194:CDS |
AAAACCTGGGTATGAAAACA+AGG | 0.598417 | 8.3:-36253404 | None:intergenic |
GGTTGGTGCATTGGTCGAGA+CGG | 0.601895 | 8.3:+36257468 | MS.gene71194:CDS |
TCCCTACAACTCGCCACAGG+TGG | 0.604512 | 8.3:+36255491 | MS.gene71194:CDS |
GGCAATGCAAAATGCAATCG+AGG | 0.608997 | 8.3:+36255462 | MS.gene71194:CDS |
CCACTTACAACATCAACAGA+TGG | 0.612472 | 8.3:-36256823 | None:intergenic |
TTGTTATTACGGGAGAGGAA+CGG | 0.613340 | 8.3:-36252207 | None:intergenic |
GGCGATGAAAGAAGGGAGAG+AGG | 0.615584 | 8.3:-36252146 | None:intergenic |
AATTGAAAGAAGATGGATTG+TGG | 0.618386 | 8.3:+36254828 | MS.gene71194:CDS |
TGAAACGGCGGTGTACACAG+TGG | 0.619478 | 8.3:+36252451 | MS.gene71194:CDS |
AAACGATCCAAACAGAGTGA+TGG | 0.620927 | 8.3:+36256647 | MS.gene71194:CDS |
GAGAAAAGGACGAGATGGGG+AGG | 0.628028 | 8.3:+36254691 | MS.gene71194:CDS |
AGCGTCGCAACCGAGATGGG+TGG | 0.630190 | 8.3:-36253371 | None:intergenic |
CTGGGTATGAAAACAAGGAG+AGG | 0.637729 | 8.3:-36253399 | None:intergenic |
ATGAAAGAAAGAGTATAAAG+GGG | 0.638626 | 8.3:-36252235 | None:intergenic |
TCAGTTGTAGCATTCCTGGT+GGG | 0.641081 | 8.3:-36256443 | None:intergenic |
AAATGGACTTGCATGTAAGG+AGG | 0.643265 | 8.3:+36254927 | MS.gene71194:CDS |
GCAACTATGGTTTGAAACGA+CGG | 0.643558 | 8.3:-36252295 | None:intergenic |
CAAGACGGTGAGAGGAAGAG+GGG | 0.643606 | 8.3:-36252266 | None:intergenic |
TGACCGAAAATAGCATGAGT+GGG | 0.646149 | 8.3:-36253346 | None:intergenic |
TGTGGTAGTACTGATGGTGA+AGG | 0.646539 | 8.3:+36254515 | MS.gene71194:CDS |
GGTGACTCAAATCCAAACAA+TGG | 0.647470 | 8.3:+36256488 | MS.gene71194:CDS |
GGTGACTCAAATCCAAACAA+TGG | 0.647470 | 8.3:+36256527 | MS.gene71194:CDS |
GTGACCGAAAATAGCATGAG+TGG | 0.651594 | 8.3:-36253347 | None:intergenic |
CCGAAAATAGCATGAGTGGG+TGG | 0.653975 | 8.3:-36253343 | None:intergenic |
TTACTTCTGATTTACCCACC+AGG | 0.655490 | 8.3:+36256429 | MS.gene71194:CDS |
GGGGCAGATTGAAGGAAATG+GGG | 0.658543 | 8.3:+36252410 | MS.gene71194:CDS |
TATTCCATAAACACCACCTG+TGG | 0.662691 | 8.3:-36255504 | None:intergenic |
AAACGGCGGTGTACACAGTG+GGG | 0.665693 | 8.3:+36252453 | MS.gene71194:CDS |
AGCATACCAGAAAACAGGGG+AGG | 0.667122 | 8.3:-36254257 | None:intergenic |
AGATCGGCGACGATGGATGG+CGG | 0.669416 | 8.3:-36252184 | None:intergenic |
ATACCAGCCCTAGAAAGGCA+AGG | 0.674438 | 8.3:+36254885 | MS.gene71194:CDS |
TCCAAACAGAGTGATGGCAG+AGG | 0.674903 | 8.3:+36256653 | MS.gene71194:CDS |
AACGGCGGTGTACACAGTGG+GGG | 0.675937 | 8.3:+36252454 | MS.gene71194:CDS |
AAACGACGGTGATGACAAGA+CGG | 0.681698 | 8.3:-36252281 | None:intergenic |
GGTCAGTCACAATACCAACA+GGG | 0.687173 | 8.3:-36255432 | None:intergenic |
CAATACATGAAAACAAAGAG+GGG | 0.692416 | 8.3:-36252383 | None:intergenic |
GTCAGTCACAATACCAACAG+GGG | 0.694377 | 8.3:-36255431 | None:intergenic |
GGGCAGATTGAAGGAAATGG+GGG | 0.708151 | 8.3:+36252411 | MS.gene71194:CDS |
GGAAACAAGTGTTGAAACGG+CGG | 0.723886 | 8.3:+36252439 | MS.gene71194:CDS |
ACCGATGTAAAATTTCATGG+AGG | 0.733270 | 8.3:-36256406 | None:intergenic |
TCAGTCACAATACCAACAGG+GGG | 0.734277 | 8.3:-36255430 | None:intergenic |
AACAGCATACCAGAAAACAG+GGG | 0.747439 | 8.3:-36254260 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTTCATATTAATTATTG+GGG | + | chr8.3:36252759-36252778 | MS.gene71194:intron | 10.0% |
!! | AGAATAAAACAAAAATTATT+TGG | - | chr8.3:36253547-36253566 | None:intergenic | 10.0% |
!! | GAATAAAACAAAAATTATTT+GGG | - | chr8.3:36253546-36253565 | None:intergenic | 10.0% |
!!! | ATTAATTGTATTTTAACTAT+TGG | - | chr8.3:36252969-36252988 | None:intergenic | 10.0% |
!! | AATTAATATTGAACATATTC+AGG | - | chr8.3:36253719-36253738 | None:intergenic | 15.0% |
!! | ACAAAATTATGAACAATATA+AGG | + | chr8.3:36257190-36257209 | MS.gene71194:intron | 15.0% |
!! | CATTAAATATAATTTAAGCA+TGG | - | chr8.3:36254306-36254325 | None:intergenic | 15.0% |
!! | TCTATTTCATAAAAGAAATT+TGG | - | chr8.3:36255154-36255173 | None:intergenic | 15.0% |
!! | TTAGTGAATTCAAAAATTTA+GGG | - | chr8.3:36253669-36253688 | None:intergenic | 15.0% |
!! | TTTAGTGAATTCAAAAATTT+AGG | - | chr8.3:36253670-36253689 | None:intergenic | 15.0% |
!!! | CTTGTTAAGATATTATTTTT+GGG | + | chr8.3:36255726-36255745 | MS.gene71194:CDS | 15.0% |
!!! | TCTAGTTTTTAAAATTTCAA+TGG | + | chr8.3:36253440-36253459 | MS.gene71194:intron | 15.0% |
!!! | TTCGGTTTTTTTTTTTTTTT+GGG | + | chr8.3:36257046-36257065 | MS.gene71194:intron | 15.0% |
!!! | TTTCGGTTTTTTTTTTTTTT+TGG | + | chr8.3:36257045-36257064 | MS.gene71194:intron | 15.0% |
!!! | TTTCTTTTATGAAATAGATT+TGG | + | chr8.3:36255156-36255175 | MS.gene71194:intron | 15.0% |
!! | AAATAATATCTTAACAAGGT+TGG | - | chr8.3:36255724-36255743 | None:intergenic | 20.0% |
!! | AATTAATTAAAGTTCTCCAT+AGG | + | chr8.3:36252982-36253001 | MS.gene71194:intron | 20.0% |
!! | ATGTTTGTAAAGTTAACATT+AGG | + | chr8.3:36257085-36257104 | MS.gene71194:intron | 20.0% |
!! | ATTCATATCTCTTAAAAAGA+AGG | - | chr8.3:36253909-36253928 | None:intergenic | 20.0% |
!! | CCAAAAATAATATCTTAACA+AGG | - | chr8.3:36255728-36255747 | None:intergenic | 20.0% |
!! | CTAAATGATGAAATTGATTA+AGG | + | chr8.3:36253685-36253704 | MS.gene71194:intron | 20.0% |
!! | GATGGAAGAAAAATATTAAA+AGG | + | chr8.3:36256252-36256271 | MS.gene71194:intron | 20.0% |
!! | TAATTAATCAACCATGAAAA+TGG | + | chr8.3:36257153-36257172 | MS.gene71194:intron | 20.0% |
!! | TAATTCATGATCATGAATTT+CGG | + | chr8.3:36257028-36257047 | MS.gene71194:intron | 20.0% |
!! | TGAAGCATAAATAATACAAT+TGG | - | chr8.3:36252812-36252831 | None:intergenic | 20.0% |
!! | TTGACAAAAATAGTTTATCA+AGG | - | chr8.3:36255116-36255135 | None:intergenic | 20.0% |
!! | TTGAGTATTTATATATGAGA+GGG | + | chr8.3:36253997-36254016 | MS.gene71194:intron | 20.0% |
!! | TTGTAATTACCATGTATATA+TGG | + | chr8.3:36256708-36256727 | MS.gene71194:intron | 20.0% |
!!! | AAACTATTTTTGTCAAATGA+GGG | + | chr8.3:36255120-36255139 | MS.gene71194:intron | 20.0% |
!!! | AACAAAAATTATTTGGGTTT+AGG | - | chr8.3:36253540-36253559 | None:intergenic | 20.0% |
!!! | AACAAGTTATTTCACTATTT+TGG | + | chr8.3:36254099-36254118 | MS.gene71194:intron | 20.0% |
!!! | AACAATGATATTGTGTTTTT+TGG | + | chr8.3:36256981-36257000 | MS.gene71194:intron | 20.0% |
!!! | AGGGTTTTTAATTTGAAATT+TGG | - | chr8.3:36253650-36253669 | None:intergenic | 20.0% |
!!! | ATCCATAAATTTTCAATTGT+GGG | - | chr8.3:36254474-36254493 | None:intergenic | 20.0% |
!!! | CCTTGTTAAGATATTATTTT+TGG | + | chr8.3:36255725-36255744 | MS.gene71194:CDS | 20.0% |
!!! | CTATTGTTTCTATTTTATTG+TGG | + | chr8.3:36257431-36257450 | MS.gene71194:intron | 20.0% |
!!! | GAAAAACACATATCTATTTT+AGG | - | chr8.3:36254596-36254615 | None:intergenic | 20.0% |
!!! | GGGTTTTTAATTTGAAATTT+GGG | - | chr8.3:36253649-36253668 | None:intergenic | 20.0% |
!!! | GGTTTTTAATTTGAAATTTG+GGG | - | chr8.3:36253648-36253667 | None:intergenic | 20.0% |
!!! | TAAACTATTTTTGTCAAATG+AGG | + | chr8.3:36255119-36255138 | MS.gene71194:intron | 20.0% |
!!! | TATCCATAAATTTTCAATTG+TGG | - | chr8.3:36254475-36254494 | None:intergenic | 20.0% |
!!! | TTGTATAGCTTTTTAATTCA+TGG | + | chr8.3:36255386-36255405 | MS.gene71194:intron | 20.0% |
! | AAACTTTCAATACCATTGTT+TGG | - | chr8.3:36256503-36256522 | None:intergenic | 25.0% |
! | AATAAGAAAGAAGGAAAGTA+AGG | - | chr8.3:36253175-36253194 | None:intergenic | 25.0% |
! | AATGTTATAGGAAGTTTCAA+TGG | + | chr8.3:36256467-36256486 | MS.gene71194:CDS | 25.0% |
! | AATTTGATACAAATCTTAGC+AGG | - | chr8.3:36254812-36254831 | None:intergenic | 25.0% |
! | ACAATACATGAAAACAAAGA+GGG | - | chr8.3:36252387-36252406 | None:intergenic | 25.0% |
! | ATGCAATATCCATATATACA+TGG | - | chr8.3:36256720-36256739 | None:intergenic | 25.0% |
! | ATGTATTCTCTTCAAAGATT+TGG | + | chr8.3:36257359-36257378 | MS.gene71194:intron | 25.0% |
! | ATGTGTCTTGTATCATTATA+AGG | + | chr8.3:36257269-36257288 | MS.gene71194:intron | 25.0% |
! | GATTAAGTTTGTAATGAAAG+AGG | + | chr8.3:36255576-36255595 | MS.gene71194:CDS | 25.0% |
! | GTATACTCATGCTAAATTTA+AGG | + | chr8.3:36255959-36255978 | MS.gene71194:intron | 25.0% |
! | GTTGAGTATTTATATATGAG+AGG | + | chr8.3:36253996-36254015 | MS.gene71194:intron | 25.0% |
! | TAAAAGTGGTAAGAATTGTA+AGG | + | chr8.3:36253785-36253804 | MS.gene71194:intron | 25.0% |
! | TAAACCGATGTAAAATTTCA+TGG | - | chr8.3:36256412-36256431 | None:intergenic | 25.0% |
! | TAAATGGAACAATAGGTAAA+TGG | + | chr8.3:36252703-36252722 | MS.gene71194:intron | 25.0% |
! | TGAATTTCAATACCATTGTT+TGG | - | chr8.3:36256542-36256561 | None:intergenic | 25.0% |
! | TGTATCAAATTGAAAGAAGA+TGG | + | chr8.3:36254821-36254840 | MS.gene71194:CDS | 25.0% |
! | TTAAAAACTAGAACAGAGAA+AGG | - | chr8.3:36253432-36253451 | None:intergenic | 25.0% |
! | TTCACAATTTCAACATAATG+AGG | - | chr8.3:36253974-36253993 | None:intergenic | 25.0% |
!! | AAAAGGCATATCATATTTGT+TGG | - | chr8.3:36255284-36255303 | None:intergenic | 25.0% |
!! | AATGGTATTGAAAGTTTCAA+TGG | + | chr8.3:36256506-36256525 | MS.gene71194:CDS | 25.0% |
!! | ACATTTTTCTTTTTGATGGA+GGG | - | chr8.3:36256595-36256614 | None:intergenic | 25.0% |
!! | ATGAAAGAAAGAGTATAAAG+GGG | - | chr8.3:36252238-36252257 | None:intergenic | 25.0% |
!! | ATTCTTGCATTTTTATCATG+GGG | + | chr8.3:36253593-36253612 | MS.gene71194:intron | 25.0% |
!! | CATTCTTGCATTTTTATCAT+GGG | + | chr8.3:36253592-36253611 | MS.gene71194:intron | 25.0% |
!! | CATTTAGTCCATTTAAGTTA+CGG | - | chr8.3:36252689-36252708 | None:intergenic | 25.0% |
!! | CTTGTTATATACACACAAAA+GGG | - | chr8.3:36256953-36256972 | None:intergenic | 25.0% |
!! | GATGAAAGAAAGAGTATAAA+GGG | - | chr8.3:36252239-36252258 | None:intergenic | 25.0% |
!! | TCATTCTTGCATTTTTATCA+TGG | + | chr8.3:36253591-36253610 | MS.gene71194:intron | 25.0% |
!! | TCTTGTTATATACACACAAA+AGG | - | chr8.3:36256954-36256973 | None:intergenic | 25.0% |
!! | TTTGGAACATATATAACCTA+AGG | - | chr8.3:36252740-36252759 | None:intergenic | 25.0% |
!!! | AAAGAGTATGCTTTTAGAAA+GGG | + | chr8.3:36254644-36254663 | MS.gene71194:CDS | 25.0% |
!!! | AATGATATTGTGTTTTTTGG+TGG | + | chr8.3:36256984-36257003 | MS.gene71194:intron | 25.0% |
!!! | AATTTAGAGGTATTTTGTGT+CGG | + | chr8.3:36256165-36256184 | MS.gene71194:intron | 25.0% |
!!! | AGAAGTATGTTTTAACTAGA+TGG | + | chr8.3:36256234-36256253 | MS.gene71194:intron | 25.0% |
!!! | TAAAGAGTATGCTTTTAGAA+AGG | + | chr8.3:36254643-36254662 | MS.gene71194:CDS | 25.0% |
!!! | TAGATGATTTTGAAGAGAAA+TGG | + | chr8.3:36255620-36255639 | MS.gene71194:CDS | 25.0% |
!!! | TGAACAGCTCTAATATATTT+TGG | + | chr8.3:36256888-36256907 | MS.gene71194:intron | 25.0% |
!!! | TTAAGATATTATTTTTGGGC+AGG | + | chr8.3:36255730-36255749 | MS.gene71194:CDS | 25.0% |
!!! | TTATTTTAAATCTCAACCCT+TGG | + | chr8.3:36252636-36252655 | MS.gene71194:intron | 25.0% |
!!! | TTTGTTTTCATGTATTGTGA+CGG | + | chr8.3:36252389-36252408 | MS.gene71194:CDS | 25.0% |
AACATATATAACCTAAGGTC+AGG | - | chr8.3:36252735-36252754 | None:intergenic | 30.0% | |
AAGATTAGAACATCGAGAAA+AGG | + | chr8.3:36254677-36254696 | MS.gene71194:CDS | 30.0% | |
AATCAACATTACTTGGATGT+GGG | + | chr8.3:36255335-36255354 | MS.gene71194:intron | 30.0% | |
AATCAACCATGAAAATGGTA+TGG | + | chr8.3:36257158-36257177 | MS.gene71194:intron | 30.0% | |
ACACAGCTAATACTTAAAAG+TGG | + | chr8.3:36253771-36253790 | MS.gene71194:intron | 30.0% | |
ACTGAAATGGAAAAAACAGA+AGG | - | chr8.3:36252126-36252145 | None:intergenic | 30.0% | |
ATAATCTTGAAGAGAAAGGT+AGG | + | chr8.3:36254026-36254045 | MS.gene71194:intron | 30.0% | |
ATGAATACCACAATTTCTTG+CGG | + | chr8.3:36255900-36255919 | MS.gene71194:intron | 30.0% | |
ATGGTGGTAAATAAGAAAGA+AGG | - | chr8.3:36253184-36253203 | None:intergenic | 30.0% | |
ATTATAAATACCGAGACTCT+TGG | - | chr8.3:36252860-36252879 | None:intergenic | 30.0% | |
ATTTGTCACTCTTTCAGAAT+TGG | - | chr8.3:36256776-36256795 | None:intergenic | 30.0% | |
CAATACATGAAAACAAAGAG+GGG | - | chr8.3:36252386-36252405 | None:intergenic | 30.0% | |
CACAATACATGAAAACAAAG+AGG | - | chr8.3:36252388-36252407 | None:intergenic | 30.0% | |
CACCCACAATTGAAAATTTA+TGG | + | chr8.3:36254469-36254488 | MS.gene71194:intron | 30.0% | |
CATTTAATGAAAGAGATGTG+AGG | + | chr8.3:36255038-36255057 | MS.gene71194:intron | 30.0% | |
CTAGTTAAAACATACTTCTC+TGG | - | chr8.3:36256233-36256252 | None:intergenic | 30.0% | |
CTCACATCTCTTTCATTAAA+TGG | - | chr8.3:36255040-36255059 | None:intergenic | 30.0% | |
CTGAAATGGAAAAAACAGAA+GGG | - | chr8.3:36252125-36252144 | None:intergenic | 30.0% | |
GCTACAACTGAAAATGTTAT+AGG | + | chr8.3:36256455-36256474 | MS.gene71194:CDS | 30.0% | |
GGAATTATGTTAACAAGGAA+CGG | + | chr8.3:36255059-36255078 | MS.gene71194:intron | 30.0% | |
GTATAATGAACGTCATAGAT+GGG | + | chr8.3:36255696-36255715 | MS.gene71194:CDS | 30.0% | |
GTGGATATGGTGATTATAAA+AGG | + | chr8.3:36255554-36255573 | MS.gene71194:CDS | 30.0% | |
TACTCATGCTAAATTTAAGG+AGG | + | chr8.3:36255962-36255981 | MS.gene71194:intron | 30.0% | |
TCAATTGAAAAGCAATTCCA+AGG | + | chr8.3:36255933-36255952 | MS.gene71194:intron | 30.0% | |
TCATGTCAATGAAATATCAC+TGG | + | chr8.3:36257234-36257253 | MS.gene71194:intron | 30.0% | |
TGAAAATGGTATGGTAGTAA+TGG | + | chr8.3:36257167-36257186 | MS.gene71194:intron | 30.0% | |
TGCTCATTGTTTGAATTTAG+AGG | + | chr8.3:36256152-36256171 | MS.gene71194:intron | 30.0% | |
TGTATAATGAACGTCATAGA+TGG | + | chr8.3:36255695-36255714 | MS.gene71194:CDS | 30.0% | |
TGTGAGGAATTATGTTAACA+AGG | + | chr8.3:36255054-36255073 | MS.gene71194:intron | 30.0% | |
TTAAGCATAGAAAAAAGACG+TGG | + | chr8.3:36257317-36257336 | MS.gene71194:intron | 30.0% | |
TTCTGTTTGTCCAAATTTGT+AGG | + | chr8.3:36256747-36256766 | MS.gene71194:intron | 30.0% | |
! | AAGGGGATATGTTGTTATTA+CGG | - | chr8.3:36252221-36252240 | None:intergenic | 30.0% |
! | ATTGAAATCAATGATGATGC+AGG | + | chr8.3:36254953-36254972 | MS.gene71194:CDS | 30.0% |
! | CGATGAAAGAAAGAGTATAA+AGG | - | chr8.3:36252240-36252259 | None:intergenic | 30.0% |
! | GACATTTTTCTTTTTGATGG+AGG | - | chr8.3:36256596-36256615 | None:intergenic | 30.0% |
! | GCAGACATTTTTCTTTTTGA+TGG | - | chr8.3:36256599-36256618 | None:intergenic | 30.0% |
! | TAAGTGATTTTGTGCAGTTT+TGG | + | chr8.3:36254435-36254454 | MS.gene71194:intron | 30.0% |
! | TCATGTAAGGAATGTCTTTT+GGG | + | chr8.3:36255189-36255208 | MS.gene71194:intron | 30.0% |
! | TTACTACCATACCATTTTCA+TGG | - | chr8.3:36257167-36257186 | None:intergenic | 30.0% |
! | TTCATGTAAGGAATGTCTTT+TGG | + | chr8.3:36255188-36255207 | MS.gene71194:intron | 30.0% |
! | TTGTTTTCATGTATTGTGAC+GGG | + | chr8.3:36252390-36252409 | MS.gene71194:CDS | 30.0% |
! | TTTTCAATTGTGGGTGAAAT+TGG | - | chr8.3:36254465-36254484 | None:intergenic | 30.0% |
!! | AAGCTCAAATTTTTCGATGA+AGG | - | chr8.3:36255650-36255669 | None:intergenic | 30.0% |
!! | AATGGACTAAATGGAACAAT+AGG | + | chr8.3:36252696-36252715 | MS.gene71194:intron | 30.0% |
!! | AATTGAAAGAAGATGGATTG+TGG | + | chr8.3:36254828-36254847 | MS.gene71194:CDS | 30.0% |
!! | ATATTATCGCTTTTCAAACG+TGG | + | chr8.3:36252331-36252350 | MS.gene71194:CDS | 30.0% |
!! | CGTAACTTAAATGGACTAAA+TGG | + | chr8.3:36252687-36252706 | MS.gene71194:intron | 30.0% |
!! | TTGCATTGATTTCATAAGTG+TGG | + | chr8.3:36254059-36254078 | MS.gene71194:intron | 30.0% |
!!! | CTTTTAGAAAGGGTTTTGAA+TGG | + | chr8.3:36254654-36254673 | MS.gene71194:CDS | 30.0% |
AAAACCTGGGTATGAAAACA+AGG | - | chr8.3:36253407-36253426 | None:intergenic | 35.0% | |
AAAAGAGGGAAAATGAAACG+AGG | - | chr8.3:36253212-36253231 | None:intergenic | 35.0% | |
AAAATGAAACGAGGGAAAGA+TGG | - | chr8.3:36253203-36253222 | None:intergenic | 35.0% | |
AAAATTGCCGAAAAACTCAG+TGG | + | chr8.3:36255535-36255554 | MS.gene71194:CDS | 35.0% | |
AAACAGCATACCAGAAAACA+GGG | - | chr8.3:36254264-36254283 | None:intergenic | 35.0% | |
AAAGAGGGAAAATGAAACGA+GGG | - | chr8.3:36253211-36253230 | None:intergenic | 35.0% | |
AAATGGAAAAAACAGAAGGG+AGG | - | chr8.3:36252122-36252141 | None:intergenic | 35.0% | |
AACAGAGAAAGGAAAAAACC+TGG | - | chr8.3:36253421-36253440 | None:intergenic | 35.0% | |
ACACCAACAAAAACAGCAAA+AGG | - | chr8.3:36255301-36255320 | None:intergenic | 35.0% | |
ACAGAGAAAGGAAAAAACCT+GGG | - | chr8.3:36253420-36253439 | None:intergenic | 35.0% | |
ACGATGAAAGGATAATCAGA+GGG | + | chr8.3:36252501-36252520 | MS.gene71194:intron | 35.0% | |
AGAGTTTGAAGACACATCTA+AGG | + | chr8.3:36256382-36256401 | MS.gene71194:CDS | 35.0% | |
AGCATTCACAACTAAGATCA+TGG | - | chr8.3:36256136-36256155 | None:intergenic | 35.0% | |
CAATCAACATTACTTGGATG+TGG | + | chr8.3:36255334-36255353 | MS.gene71194:intron | 35.0% | |
CATGGTCAATCAACATTACT+TGG | + | chr8.3:36255328-36255347 | MS.gene71194:intron | 35.0% | |
CCTCATAATCTTGAAGAGAA+AGG | + | chr8.3:36254022-36254041 | MS.gene71194:intron | 35.0% | |
CCTTTCTCTTCAAGATTATG+AGG | - | chr8.3:36254025-36254044 | None:intergenic | 35.0% | |
CTCTGATTAAAGATGCATGA+GGG | + | chr8.3:36255002-36255021 | MS.gene71194:intron | 35.0% | |
CTGATCTATAACAGCAACTA+TGG | - | chr8.3:36252311-36252330 | None:intergenic | 35.0% | |
GGAAGGAAAACGAAAAAAGA+GGG | - | chr8.3:36253226-36253245 | None:intergenic | 35.0% | |
GGATAGTTCAAATGTTGTTG+TGG | + | chr8.3:36254490-36254509 | MS.gene71194:intron | 35.0% | |
GGGGAAAACGAAAATAATGA+AGG | - | chr8.3:36253629-36253648 | None:intergenic | 35.0% | |
GTAATGCAAGCATTTCTATG+AGG | + | chr8.3:36256343-36256362 | MS.gene71194:intron | 35.0% | |
GTGGCAAAAAAAGAATCCAA+GGG | - | chr8.3:36252655-36252674 | None:intergenic | 35.0% | |
TATTGTGACTGACCAATGTA+AGG | + | chr8.3:36255441-36255460 | MS.gene71194:CDS | 35.0% | |
TCACACATCCGTAACTTAAA+TGG | + | chr8.3:36252678-36252697 | MS.gene71194:intron | 35.0% | |
TCATTGCTAAGAAGATGAAG+TGG | + | chr8.3:36256927-36256946 | MS.gene71194:intron | 35.0% | |
TCTCTGATTAAAGATGCATG+AGG | + | chr8.3:36255001-36255020 | MS.gene71194:intron | 35.0% | |
TCTTCATTGAACATTGTGGA+GGG | + | chr8.3:36256020-36256039 | MS.gene71194:intron | 35.0% | |
TGAATACCACAATTTCTTGC+GGG | + | chr8.3:36255901-36255920 | MS.gene71194:intron | 35.0% | |
TGCTTCTTCATTGAACATTG+TGG | + | chr8.3:36256016-36256035 | MS.gene71194:intron | 35.0% | |
TGTGGCAAAAAAAGAATCCA+AGG | - | chr8.3:36252656-36252675 | None:intergenic | 35.0% | |
TTCTTCATTGAACATTGTGG+AGG | + | chr8.3:36256019-36256038 | MS.gene71194:intron | 35.0% | |
TTGAAATTCACAGTCCATTG+CGG | + | chr8.3:36256552-36256571 | MS.gene71194:CDS | 35.0% | |
TTGAGCTTCAGCATAATCAT+TGG | + | chr8.3:36255662-36255681 | MS.gene71194:CDS | 35.0% | |
TTTGCTAGATGCAAGTACAA+TGG | + | chr8.3:36256852-36256871 | MS.gene71194:intron | 35.0% | |
! | ACCATATCCACTGAGTTTTT+CGG | - | chr8.3:36255545-36255564 | None:intergenic | 35.0% |
! | AGAAAATGGACTTGCATGTA+AGG | + | chr8.3:36254924-36254943 | MS.gene71194:CDS | 35.0% |
! | AGCATAATCATTGGTTGACT+GGG | + | chr8.3:36255671-36255690 | MS.gene71194:CDS | 35.0% |
! | AGGGGATATGTTGTTATTAC+GGG | - | chr8.3:36252220-36252239 | None:intergenic | 35.0% |
! | ATATGTTGTTATTACGGGAG+AGG | - | chr8.3:36252215-36252234 | None:intergenic | 35.0% |
! | ATGCAAGTCCATTTTCTTGT+TGG | - | chr8.3:36254921-36254940 | None:intergenic | 35.0% |
! | ATTCTTTTTCTGCTCGACTA+CGG | - | chr8.3:36255860-36255879 | None:intergenic | 35.0% |
! | ATTTTCAGTTGTAGCATTCC+TGG | - | chr8.3:36256450-36256469 | None:intergenic | 35.0% |
! | CAAGTAATGTTGATTGACCA+TGG | - | chr8.3:36255330-36255349 | None:intergenic | 35.0% |
! | CATTTTGCATTGCCTTACAT+TGG | - | chr8.3:36255456-36255475 | None:intergenic | 35.0% |
! | GAATTGGTGTCCTACAAATT+TGG | - | chr8.3:36256760-36256779 | None:intergenic | 35.0% |
! | GTTTTTACTTCCAAGAGTCT+CGG | + | chr8.3:36252847-36252866 | MS.gene71194:intron | 35.0% |
! | TCAAATGTTGTTGTGGATTG+TGG | + | chr8.3:36254497-36254516 | MS.gene71194:CDS | 35.0% |
! | TGGATGACGATTTTCATGTA+AGG | + | chr8.3:36255176-36255195 | MS.gene71194:intron | 35.0% |
! | TGTTTTCATGTATTGTGACG+GGG | + | chr8.3:36252391-36252410 | MS.gene71194:CDS | 35.0% |
! | TTTTTCTTTTTGATGGAGGG+CGG | - | chr8.3:36256592-36256611 | None:intergenic | 35.0% |
!!! | ATGCCTTTTGCTGTTTTTGT+TGG | + | chr8.3:36255295-36255314 | MS.gene71194:intron | 35.0% |
!!! | GAGTATACACGCTTTTTTGA+TGG | + | chr8.3:36255777-36255796 | MS.gene71194:intron | 35.0% |
!!! | GGACAATTTTTTCCCATTGT+CGG | - | chr8.3:36254791-36254810 | None:intergenic | 35.0% |
!!! | TTTTTTGGTGGCCAAATCAT+GGG | + | chr8.3:36256996-36257015 | MS.gene71194:intron | 35.0% |
AAACGATCCAAACAGAGTGA+TGG | + | chr8.3:36256647-36256666 | MS.gene71194:CDS | 40.0% | |
AAATGGGCGAATCAGAAAGA+GGG | - | chr8.3:36253247-36253266 | None:intergenic | 40.0% | |
AACAGCATACCAGAAAACAG+GGG | - | chr8.3:36254263-36254282 | None:intergenic | 40.0% | |
AACCAACGTTTAGCACAACA+AGG | - | chr8.3:36253484-36253503 | None:intergenic | 40.0% | |
AATTGAAGCCACAAATGGAG+AGG | + | chr8.3:36256312-36256331 | MS.gene71194:intron | 40.0% | |
ACAGTGATTGCACATTTAGG+TGG | - | chr8.3:36253050-36253069 | None:intergenic | 40.0% | |
AGCACAGTGATTGCACATTT+AGG | - | chr8.3:36253053-36253072 | None:intergenic | 40.0% | |
ATCCTCCAACACATGATATG+TGG | - | chr8.3:36256054-36256073 | None:intergenic | 40.0% | |
ATGAAAGGATAATCAGAGGG+TGG | + | chr8.3:36252504-36252523 | MS.gene71194:intron | 40.0% | |
ATTCTTGCATGCACAAGAGA+AGG | + | chr8.3:36254725-36254744 | MS.gene71194:intron | 40.0% | |
ATTGAAGGAAATGGGGGAAT+GGG | + | chr8.3:36252417-36252436 | MS.gene71194:CDS | 40.0% | |
ATTGCATCAATCGTGTCCTA+TGG | - | chr8.3:36253001-36253020 | None:intergenic | 40.0% | |
ATTGTGGCAGTCCTGTTATT+TGG | + | chr8.3:36257447-36257466 | MS.gene71194:intron | 40.0% | |
CAAACAGCATACCAGAAAAC+AGG | - | chr8.3:36254265-36254284 | None:intergenic | 40.0% | |
CAATGCACCAACCAAATAAC+AGG | - | chr8.3:36257461-36257480 | None:intergenic | 40.0% | |
CCACTTACAACATCAACAGA+TGG | - | chr8.3:36256826-36256845 | None:intergenic | 40.0% | |
CCATCTGTTGATGTTGTAAG+TGG | + | chr8.3:36256823-36256842 | MS.gene71194:intron | 40.0% | |
CTCTGTTTGGATCGTTTACT+TGG | - | chr8.3:36256644-36256663 | None:intergenic | 40.0% | |
CTGGTATGATGAGAATGATC+AGG | - | chr8.3:36254872-36254891 | None:intergenic | 40.0% | |
CTTTGCCACATATCATGTGT+TGG | + | chr8.3:36256046-36256065 | MS.gene71194:intron | 40.0% | |
GACACAATTGAAGCCACAAA+TGG | + | chr8.3:36256307-36256326 | MS.gene71194:intron | 40.0% | |
GACGATGAAAGGATAATCAG+AGG | + | chr8.3:36252500-36252519 | MS.gene71194:intron | 40.0% | |
GCAATTGGAAAAGAAGGTGA+TGG | + | chr8.3:36255085-36255104 | MS.gene71194:intron | 40.0% | |
GGGAAGGAAAACGAAAAAAG+AGG | - | chr8.3:36253227-36253246 | None:intergenic | 40.0% | |
GGTGACTCAAATCCAAACAA+TGG | + | chr8.3:36256488-36256507 | MS.gene71194:CDS | 40.0% | |
GTTCAAGGCCAACAAGAAAA+TGG | + | chr8.3:36254910-36254929 | MS.gene71194:CDS | 40.0% | |
TAACCTTTGTCCCCATGATT+TGG | - | chr8.3:36257010-36257029 | None:intergenic | 40.0% | |
TAGAAACAATAGTTCGCTGC+TGG | - | chr8.3:36257423-36257442 | None:intergenic | 40.0% | |
TAGAAAGGCAAGGTTGTTCA+AGG | + | chr8.3:36254895-36254914 | MS.gene71194:CDS | 40.0% | |
TAGCATGAGTATACTCACCT+TGG | - | chr8.3:36255953-36255972 | None:intergenic | 40.0% | |
TATTCCATAAACACCACCTG+TGG | - | chr8.3:36255507-36255526 | None:intergenic | 40.0% | |
TCTGTTGATGTTGTAAGTGG+TGG | + | chr8.3:36256826-36256845 | MS.gene71194:intron | 40.0% | |
TGAAATTCACAGTCCATTGC+GGG | + | chr8.3:36256553-36256572 | MS.gene71194:CDS | 40.0% | |
TGAACAACCTTGCCTTTCTA+GGG | - | chr8.3:36254895-36254914 | None:intergenic | 40.0% | |
TGACCGAAAATAGCATGAGT+GGG | - | chr8.3:36253349-36253368 | None:intergenic | 40.0% | |
TGCTGATGCTCATAGGAAAT+GGG | - | chr8.3:36253263-36253282 | None:intergenic | 40.0% | |
TGTTGGAGGATGTGTTAGTT+GGG | + | chr8.3:36256063-36256082 | MS.gene71194:intron | 40.0% | |
TTACTTCTGATTTACCCACC+AGG | + | chr8.3:36256429-36256448 | MS.gene71194:CDS | 40.0% | |
TTCTTGCATGCACAAGAGAA+GGG | + | chr8.3:36254726-36254745 | MS.gene71194:intron | 40.0% | |
TTGAACAACCTTGCCTTTCT+AGG | - | chr8.3:36254896-36254915 | None:intergenic | 40.0% | |
TTGCTGATGCTCATAGGAAA+TGG | - | chr8.3:36253264-36253283 | None:intergenic | 40.0% | |
TTGTCAAACCTCTCCATTTG+TGG | - | chr8.3:36256323-36256342 | None:intergenic | 40.0% | |
TTGTTCTTGCTGATGCTCAT+AGG | - | chr8.3:36253270-36253289 | None:intergenic | 40.0% | |
TTTGTTGGTGTGAATCACCA+TGG | + | chr8.3:36255310-36255329 | MS.gene71194:intron | 40.0% | |
! | AAATGGACTTGCATGTAAGG+AGG | + | chr8.3:36254927-36254946 | MS.gene71194:CDS | 40.0% |
! | AAGAAGATGATGATGCATGC+TGG | + | chr8.3:36254567-36254586 | MS.gene71194:CDS | 40.0% |
! | AATGAGACTCATGTCACTTG+AGG | + | chr8.3:36252877-36252896 | MS.gene71194:intron | 40.0% |
! | AGAAGATGATGATGCATGCT+GGG | + | chr8.3:36254568-36254587 | MS.gene71194:CDS | 40.0% |
! | AGGGCTGCTTATGAGTATTT+TGG | + | chr8.3:36255226-36255245 | MS.gene71194:intron | 40.0% |
! | ATGAGACTCATGTCACTTGA+GGG | + | chr8.3:36252878-36252897 | MS.gene71194:intron | 40.0% |
! | CAGCATAATCATTGGTTGAC+TGG | + | chr8.3:36255670-36255689 | MS.gene71194:CDS | 40.0% |
! | CTGTTATTTGGTTGGTGCAT+TGG | + | chr8.3:36257459-36257478 | MS.gene71194:CDS | 40.0% |
! | GATGGTGAAGGTATAGAAGT+TGG | + | chr8.3:36254527-36254546 | MS.gene71194:CDS | 40.0% |
! | GCAACTATGGTTTGAAACGA+CGG | - | chr8.3:36252298-36252317 | None:intergenic | 40.0% |
! | GTAGTAGTGCTGCTATCTTA+GGG | + | chr8.3:36254127-36254146 | MS.gene71194:intron | 40.0% |
! | TACCTTGTTGTGCTAAACGT+TGG | + | chr8.3:36253479-36253498 | MS.gene71194:intron | 40.0% |
! | TGTAGTAGTGCTGCTATCTT+AGG | + | chr8.3:36254126-36254145 | MS.gene71194:intron | 40.0% |
! | TTGTTATTACGGGAGAGGAA+CGG | - | chr8.3:36252210-36252229 | None:intergenic | 40.0% |
!! | TGGGGAAACAAGTGTTGAAA+CGG | + | chr8.3:36252436-36252455 | MS.gene71194:CDS | 40.0% |
!! | TTTTTGGTGGCCAAATCATG+GGG | + | chr8.3:36256997-36257016 | MS.gene71194:intron | 40.0% |
!!! | GGAGAATTGCAGTTTTGAGA+AGG | - | chr8.3:36252365-36252384 | None:intergenic | 40.0% |
!!! | GTTTTTTGGTGGCCAAATCA+TGG | + | chr8.3:36256995-36257014 | MS.gene71194:intron | 40.0% |
AAAAAACAGAAGGGAGGAGG+CGG | - | chr8.3:36252116-36252135 | None:intergenic | 45.0% | |
AAACGACGGTGATGACAAGA+CGG | - | chr8.3:36252284-36252303 | None:intergenic | 45.0% | |
AATGGAGCATACCTGACCTT+AGG | + | chr8.3:36252721-36252740 | MS.gene71194:intron | 45.0% | |
ACAACACACGCTTAACAACC+AGG | - | chr8.3:36253026-36253045 | None:intergenic | 45.0% | |
ACACGATTGATGCAATGTCC+TGG | + | chr8.3:36253005-36253024 | MS.gene71194:intron | 45.0% | |
ACATCGAGAAAAGGACGAGA+TGG | + | chr8.3:36254686-36254705 | MS.gene71194:CDS | 45.0% | |
AGTTACGGATGTGTGACATG+TGG | - | chr8.3:36252674-36252693 | None:intergenic | 45.0% | |
ATCGAGAAAAGGACGAGATG+GGG | + | chr8.3:36254688-36254707 | MS.gene71194:CDS | 45.0% | |
ATGAAACGAGGGAAAGATGG+TGG | - | chr8.3:36253200-36253219 | None:intergenic | 45.0% | |
ATGTGTGTGTGCTCAAGAGA+GGG | + | chr8.3:36256196-36256215 | MS.gene71194:intron | 45.0% | |
ATTGTAGACACGTCCGACAA+TGG | + | chr8.3:36254775-36254794 | MS.gene71194:intron | 45.0% | |
CATCGAGAAAAGGACGAGAT+GGG | + | chr8.3:36254687-36254706 | MS.gene71194:CDS | 45.0% | |
CCTTTACGTTTAACCCGCAA+TGG | - | chr8.3:36256569-36256588 | None:intergenic | 45.0% | |
CTATGAGGTTGCTGAAGTAG+CGG | + | chr8.3:36256358-36256377 | MS.gene71194:intron | 45.0% | |
CTGCTATCTTAGGGAGTTCA+GGG | + | chr8.3:36254136-36254155 | MS.gene71194:intron | 45.0% | |
CTGGGTATGAAAACAAGGAG+AGG | - | chr8.3:36253402-36253421 | None:intergenic | 45.0% | |
GAAATGGGCGAATCAGAAAG+AGG | - | chr8.3:36253248-36253267 | None:intergenic | 45.0% | |
GAGAGGAAAGAGACGATGAA+AGG | + | chr8.3:36252489-36252508 | MS.gene71194:intron | 45.0% | |
GATTGAAGGAAATGGGGGAA+TGG | + | chr8.3:36252416-36252435 | MS.gene71194:CDS | 45.0% | |
GCCGAAAAACTCAGTGGATA+TGG | + | chr8.3:36255541-36255560 | MS.gene71194:CDS | 45.0% | |
GGCAATGCAAAATGCAATCG+AGG | + | chr8.3:36255462-36255481 | MS.gene71194:CDS | 45.0% | |
GGTCAGTCACAATACCAACA+GGG | - | chr8.3:36255435-36255454 | None:intergenic | 45.0% | |
GTCAGTCACAATACCAACAG+GGG | - | chr8.3:36255434-36255453 | None:intergenic | 45.0% | |
GTGACCGAAAATAGCATGAG+TGG | - | chr8.3:36253350-36253369 | None:intergenic | 45.0% | |
GTGGCACTGTACAAAGATGA+AGG | - | chr8.3:36253327-36253346 | None:intergenic | 45.0% | |
GTGTTGGAGGATGTGTTAGT+TGG | + | chr8.3:36256062-36256081 | MS.gene71194:intron | 45.0% | |
GTTGGAGGATGTGTTAGTTG+GGG | + | chr8.3:36256064-36256083 | MS.gene71194:intron | 45.0% | |
GTTTGACCCGCAAGAAATTG+TGG | - | chr8.3:36255910-36255929 | None:intergenic | 45.0% | |
TATGTGTGTGTGCTCAAGAG+AGG | + | chr8.3:36256195-36256214 | MS.gene71194:intron | 45.0% | |
TCAGTCACAATACCAACAGG+GGG | - | chr8.3:36255433-36255452 | None:intergenic | 45.0% | |
TCAGTTGTAGCATTCCTGGT+GGG | - | chr8.3:36256446-36256465 | None:intergenic | 45.0% | |
TCATCATACCAGCCCTAGAA+AGG | + | chr8.3:36254880-36254899 | MS.gene71194:CDS | 45.0% | |
TCATCGTCTCTTTCCTCTCA+CGG | - | chr8.3:36252488-36252507 | None:intergenic | 45.0% | |
TCATGGCTTCGTTGTATGCT+GGG | + | chr8.3:36255403-36255422 | MS.gene71194:intron | 45.0% | |
TGAGGCCTGTTTGTGATTTC+TGG | + | chr8.3:36254221-36254240 | MS.gene71194:CDS | 45.0% | |
TGCCACATATCATGTGTTGG+AGG | + | chr8.3:36256049-36256068 | MS.gene71194:intron | 45.0% | |
TGCTGGTACTGTTAACAAGG+CGG | - | chr8.3:36257406-36257425 | None:intergenic | 45.0% | |
TGGAAAAAACAGAAGGGAGG+AGG | - | chr8.3:36252119-36252138 | None:intergenic | 45.0% | |
TGGTCAGTCACAATACCAAC+AGG | - | chr8.3:36255436-36255455 | None:intergenic | 45.0% | |
TTCAGTTGTAGCATTCCTGG+TGG | - | chr8.3:36256447-36256466 | None:intergenic | 45.0% | |
TTCATGGCTTCGTTGTATGC+TGG | + | chr8.3:36255402-36255421 | MS.gene71194:intron | 45.0% | |
TTGAAGGAAATGGGGGAATG+GGG | + | chr8.3:36252418-36252437 | MS.gene71194:CDS | 45.0% | |
TTGGGCTGATGCAAGAAGTA+GGG | + | chr8.3:36255207-36255226 | MS.gene71194:intron | 45.0% | |
TTGTAGACACGTCCGACAAT+GGG | + | chr8.3:36254776-36254795 | MS.gene71194:intron | 45.0% | |
TTTGGGCTGATGCAAGAAGT+AGG | + | chr8.3:36255206-36255225 | MS.gene71194:intron | 45.0% | |
! | CAATGATGATGCAGGTGTGA+GGG | + | chr8.3:36254961-36254980 | MS.gene71194:intron | 45.0% |
! | CCATTGCGGGTTAAACGTAA+AGG | + | chr8.3:36256566-36256585 | MS.gene71194:CDS | 45.0% |
! | GTGGATTGTGGTAGTACTGA+TGG | + | chr8.3:36254509-36254528 | MS.gene71194:CDS | 45.0% |
! | TCAATGATGATGCAGGTGTG+AGG | + | chr8.3:36254960-36254979 | MS.gene71194:intron | 45.0% |
! | TGGAAAAGAAGGTGATGGCA+AGG | + | chr8.3:36255090-36255109 | MS.gene71194:intron | 45.0% |
! | TGGCAGTCCTGTTATTTGGT+TGG | + | chr8.3:36257451-36257470 | MS.gene71194:intron | 45.0% |
!! | GCCTGTTTGTGATTTCTGGT+CGG | + | chr8.3:36254225-36254244 | MS.gene71194:CDS | 45.0% |
!! | GGAAACAAGTGTTGAAACGG+CGG | + | chr8.3:36252439-36252458 | MS.gene71194:CDS | 45.0% |
!! | TGTGGTAGTACTGATGGTGA+AGG | + | chr8.3:36254515-36254534 | MS.gene71194:CDS | 45.0% |
!!! | CCACCCACTCATGCTATTTT+CGG | + | chr8.3:36253343-36253362 | MS.gene71194:CDS | 45.0% |
!!! | CTCTCCTTGTTTTCATACCC+AGG | + | chr8.3:36253400-36253419 | MS.gene71194:CDS | 45.0% |
!! | AAAAATTTCATATTAATTAT+TGG | + | chr8.3:36252757-36252776 | MS.gene71194:intron | 5.0% |
!! | AAAATTTCATATTAATTATT+GGG | + | chr8.3:36252758-36252777 | MS.gene71194:intron | 5.0% |
!!! | AATAATTAATATGAAATTTT+TGG | - | chr8.3:36252758-36252777 | None:intergenic | 5.0% |
AACAAGGAACGGCGTGCAAT+TGG | + | chr8.3:36255070-36255089 | MS.gene71194:intron | 50.0% | |
ACAAGACGGTGAGAGGAAGA+GGG | - | chr8.3:36252270-36252289 | None:intergenic | 50.0% | |
ACGGGGCAGATTGAAGGAAA+TGG | + | chr8.3:36252408-36252427 | MS.gene71194:CDS | 50.0% | |
AGAGGGTAGAGGAAGGAACA+CGG | + | chr8.3:36252565-36252584 | MS.gene71194:intron | 50.0% | |
AGCATACCAGAAAACAGGGG+AGG | - | chr8.3:36254260-36254279 | None:intergenic | 50.0% | |
ATACCAGCCCTAGAAAGGCA+AGG | + | chr8.3:36254885-36254904 | MS.gene71194:CDS | 50.0% | |
ATATAGCGTCGCAACCGAGA+TGG | - | chr8.3:36253378-36253397 | None:intergenic | 50.0% | |
CCGAAAATAGCATGAGTGGG+TGG | - | chr8.3:36253346-36253365 | None:intergenic | 50.0% | |
CGCTGCTGGTACTGTTAACA+AGG | - | chr8.3:36257409-36257428 | None:intergenic | 50.0% | |
CGGCGTGCAATTGGAAAAGA+AGG | + | chr8.3:36255079-36255098 | MS.gene71194:intron | 50.0% | |
CGGGGCAGATTGAAGGAAAT+GGG | + | chr8.3:36252409-36252428 | MS.gene71194:CDS | 50.0% | |
GAAGGGAGAGAGGACTGAAA+TGG | - | chr8.3:36252139-36252158 | None:intergenic | 50.0% | |
GATAATCAGAGGGTGGCGAT+TGG | + | chr8.3:36252511-36252530 | MS.gene71194:intron | 50.0% | |
GCCGACCAGAAATCACAAAC+AGG | - | chr8.3:36254229-36254248 | None:intergenic | 50.0% | |
GCTGCTATCTTAGGGAGTTC+AGG | + | chr8.3:36254135-36254154 | MS.gene71194:intron | 50.0% | |
GGGCAGATTGAAGGAAATGG+GGG | + | chr8.3:36252411-36252430 | MS.gene71194:CDS | 50.0% | |
GGGGCAGATTGAAGGAAATG+GGG | + | chr8.3:36252410-36252429 | MS.gene71194:CDS | 50.0% | |
TACTGTTAACAAGGCGGCTG+CGG | - | chr8.3:36257400-36257419 | None:intergenic | 50.0% | |
TATAGCGTCGCAACCGAGAT+GGG | - | chr8.3:36253377-36253396 | None:intergenic | 50.0% | |
TCCAAACAGAGTGATGGCAG+AGG | + | chr8.3:36256653-36256672 | MS.gene71194:CDS | 50.0% | |
TCCTCTGCCATCACTCTGTT+TGG | - | chr8.3:36256657-36256676 | None:intergenic | 50.0% | |
TGGCCAAATCATGGGGACAA+AGG | + | chr8.3:36257004-36257023 | MS.gene71194:intron | 50.0% | |
! | AGACTCATGTCACTTGAGGG+AGG | + | chr8.3:36252881-36252900 | MS.gene71194:intron | 50.0% |
! | AGGATGACGGCGATGAAAGA+AGG | - | chr8.3:36252157-36252176 | None:intergenic | 50.0% |
! | ATTGTGACGGGGCAGATTGA+AGG | + | chr8.3:36252402-36252421 | MS.gene71194:CDS | 50.0% |
! | CCTTTTCTGCTATCTGGCCT+GGG | + | chr8.3:36254177-36254196 | MS.gene71194:intron | 50.0% |
! | CTTGGATGTGGGTTGCTATC+AGG | + | chr8.3:36255346-36255365 | MS.gene71194:intron | 50.0% |
! | GGATGACGGCGATGAAAGAA+GGG | - | chr8.3:36252156-36252175 | None:intergenic | 50.0% |
! | TTTTCCCTACAACTCGCCAC+AGG | + | chr8.3:36255488-36255507 | MS.gene71194:CDS | 50.0% |
!!! | CAGGGAGTGTTTTTCTGCCT+GGG | + | chr8.3:36254154-36254173 | MS.gene71194:intron | 50.0% |
!!! | TCAGGGAGTGTTTTTCTGCC+TGG | + | chr8.3:36254153-36254172 | MS.gene71194:intron | 50.0% |
AAACGGCGGTGTACACAGTG+GGG | + | chr8.3:36252453-36252472 | MS.gene71194:CDS | 55.0% | |
AATCAGAGGGTGGCGATTGG+CGG | + | chr8.3:36252514-36252533 | MS.gene71194:intron | 55.0% | |
ACCACCTGTGGCGAGTTGTA+GGG | - | chr8.3:36255495-36255514 | None:intergenic | 55.0% | |
ACCATGAGAGGAGAGGGTAG+AGG | + | chr8.3:36252554-36252573 | MS.gene71194:intron | 55.0% | |
AGTCACGACCATGAGAGGAG+AGG | + | chr8.3:36252547-36252566 | MS.gene71194:intron | 55.0% | |
CAAGACGGTGAGAGGAAGAG+GGG | - | chr8.3:36252269-36252288 | None:intergenic | 55.0% | |
CCAGATAGCAGAAAAGGCCC+AGG | - | chr8.3:36254174-36254193 | None:intergenic | 55.0% | |
CCCAGGCCAGATAGCAGAAA+AGG | - | chr8.3:36254180-36254199 | None:intergenic | 55.0% | |
CTCGCCACAGGTGGTGTTTA+TGG | + | chr8.3:36255500-36255519 | MS.gene71194:CDS | 55.0% | |
GAAACGGCGGTGTACACAGT+GGG | + | chr8.3:36252452-36252471 | MS.gene71194:CDS | 55.0% | |
GACAAGACGGTGAGAGGAAG+AGG | - | chr8.3:36252271-36252290 | None:intergenic | 55.0% | |
GAGAAAAGGACGAGATGGGG+AGG | + | chr8.3:36254691-36254710 | MS.gene71194:CDS | 55.0% | |
GGCGATGAAAGAAGGGAGAG+AGG | - | chr8.3:36252149-36252168 | None:intergenic | 55.0% | |
GGGCGAATCAGAAAGAGGGA+AGG | - | chr8.3:36253243-36253262 | None:intergenic | 55.0% | |
GGTAGAGGAAGGAACACGGA+GGG | + | chr8.3:36252569-36252588 | MS.gene71194:intron | 55.0% | |
GGTGATGACAAGACGGTGAG+AGG | - | chr8.3:36252277-36252296 | None:intergenic | 55.0% | |
GTCACGACCATGAGAGGAGA+GGG | + | chr8.3:36252548-36252567 | MS.gene71194:intron | 55.0% | |
TACGGGAGAGGAACGGAGAT+CGG | - | chr8.3:36252203-36252222 | None:intergenic | 55.0% | |
TCCTCTACCCTCTCCTCTCA+TGG | - | chr8.3:36252558-36252577 | None:intergenic | 55.0% | |
TCGTCTCTTTCCTCTCACGG+TGG | - | chr8.3:36252485-36252504 | None:intergenic | 55.0% | |
TCTGCTATCTGGCCTGGGAA+GGG | + | chr8.3:36254182-36254201 | MS.gene71194:intron | 55.0% | |
TGAAACGGCGGTGTACACAG+TGG | + | chr8.3:36252451-36252470 | MS.gene71194:CDS | 55.0% | |
TGAGAGGAGAGGGTAGAGGA+AGG | + | chr8.3:36252558-36252577 | MS.gene71194:intron | 55.0% | |
TTCGGTCACTCCACCCATCT+CGG | + | chr8.3:36253361-36253380 | MS.gene71194:CDS | 55.0% | |
TTCTGCTATCTGGCCTGGGA+AGG | + | chr8.3:36254181-36254200 | MS.gene71194:intron | 55.0% | |
! | CCTGGGCCTTTTCTGCTATC+TGG | + | chr8.3:36254171-36254190 | MS.gene71194:intron | 55.0% |
! | GCCTTTTCTGCTATCTGGCC+TGG | + | chr8.3:36254176-36254195 | MS.gene71194:intron | 55.0% |
! | GGTTGGTGCATTGGTCGAGA+CGG | + | chr8.3:36257468-36257487 | MS.gene71194:CDS | 55.0% |
! | TTTGCGCCTCCCCTGTTTTC+TGG | + | chr8.3:36254251-36254270 | MS.gene71194:CDS | 55.0% |
!! | CAACCTTGCCTTTCTAGGGC+TGG | - | chr8.3:36254891-36254910 | None:intergenic | 55.0% |
!! | GGAGGTCTGTGCTGTTTGTG+AGG | + | chr8.3:36254203-36254222 | MS.gene71194:CDS | 55.0% |
AACGGCGGTGTACACAGTGG+GGG | + | chr8.3:36252454-36252473 | MS.gene71194:CDS | 60.0% | |
AGATCGGCGACGATGGATGG+CGG | - | chr8.3:36252187-36252206 | None:intergenic | 60.0% | |
ATGCTGGGAAAGCCCCCTGT+TGG | + | chr8.3:36255418-36255437 | MS.gene71194:intron | 60.0% | |
CACCACCTGTGGCGAGTTGT+AGG | - | chr8.3:36255496-36255515 | None:intergenic | 60.0% | |
CATTGGTCGAGACGGCTGGT+TGG | + | chr8.3:36257476-36257495 | MS.gene71194:CDS | 60.0% | |
GGAGGAGTCACGACCATGAG+AGG | + | chr8.3:36252542-36252561 | MS.gene71194:intron | 60.0% | |
GGGTAGAGGAAGGAACACGG+AGG | + | chr8.3:36252568-36252587 | MS.gene71194:intron | 60.0% | |
GGTGAGAGGAAGAGGGGAGA+GGG | - | chr8.3:36252263-36252282 | None:intergenic | 60.0% | |
TCCCTACAACTCGCCACAGG+TGG | + | chr8.3:36255491-36255510 | MS.gene71194:CDS | 60.0% | |
TGGCGGTGGATGGAGGATGA+CGG | - | chr8.3:36252170-36252189 | None:intergenic | 60.0% | |
AGCGTCGCAACCGAGATGGG+TGG | - | chr8.3:36253374-36253393 | None:intergenic | 65.0% | |
CAGCACAGACCTCCCTTCCC+AGG | - | chr8.3:36254197-36254216 | None:intergenic | 65.0% | |
CGGAGATCGGCGACGATGGA+TGG | - | chr8.3:36252190-36252209 | None:intergenic | 65.0% | |
CGGTGAGAGGAAGAGGGGAG+AGG | - | chr8.3:36252264-36252283 | None:intergenic | 65.0% | |
GCTATCTGGCCTGGGAAGGG+AGG | + | chr8.3:36254185-36254204 | MS.gene71194:intron | 65.0% | |
GGAACGGAGATCGGCGACGA+TGG | - | chr8.3:36252194-36252213 | None:intergenic | 65.0% | |
GGGGGCAATACCACCGTGAG+AGG | + | chr8.3:36252472-36252491 | MS.gene71194:intron | 65.0% | |
! | CGACGATGGATGGCGGTGGA+TGG | - | chr8.3:36252180-36252199 | None:intergenic | 65.0% |
! | CGATGGATGGCGGTGGATGG+AGG | - | chr8.3:36252177-36252196 | None:intergenic | 65.0% |
! | GAGACGGCTGGTTGGTGTCC+TGG | + | chr8.3:36257484-36257503 | MS.gene71194:CDS | 65.0% |
! | GGCTGGTTGGTGTCCTGGAC+CGG | + | chr8.3:36257489-36257508 | MS.gene71194:CDS | 65.0% |
! | GGTGCATTGGTCGAGACGGC+TGG | + | chr8.3:36257472-36257491 | MS.gene71194:CDS | 65.0% |
CAGAGGGTGGCGATTGGCGG+CGG | + | chr8.3:36252517-36252536 | MS.gene71194:intron | 70.0% | |
! | TCGGCGACGATGGATGGCGG+TGG | - | chr8.3:36252184-36252203 | None:intergenic | 70.0% |
GGGTGGCGATTGGCGGCGGT+CGG | + | chr8.3:36252521-36252540 | MS.gene71194:intron | 75.0% | |
TGGCGATTGGCGGCGGTCGG+AGG | + | chr8.3:36252524-36252543 | MS.gene71194:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 36252108 | 36257516 | 36252108 | ID=MS.gene71194 |
chr8.3 | mRNA | 36252108 | 36257516 | 36252108 | ID=MS.gene71194.t1;Parent=MS.gene71194 |
chr8.3 | exon | 36252108 | 36252486 | 36252108 | ID=MS.gene71194.t1.exon1;Parent=MS.gene71194.t1 |
chr8.3 | CDS | 36252108 | 36252486 | 36252108 | ID=cds.MS.gene71194.t1;Parent=MS.gene71194.t1 |
chr8.3 | exon | 36253341 | 36253421 | 36253341 | ID=MS.gene71194.t1.exon2;Parent=MS.gene71194.t1 |
chr8.3 | CDS | 36253341 | 36253421 | 36253341 | ID=cds.MS.gene71194.t1;Parent=MS.gene71194.t1 |
chr8.3 | exon | 36254203 | 36254272 | 36254203 | ID=MS.gene71194.t1.exon3;Parent=MS.gene71194.t1 |
chr8.3 | CDS | 36254203 | 36254272 | 36254203 | ID=cds.MS.gene71194.t1;Parent=MS.gene71194.t1 |
chr8.3 | exon | 36254496 | 36254712 | 36254496 | ID=MS.gene71194.t1.exon4;Parent=MS.gene71194.t1 |
chr8.3 | CDS | 36254496 | 36254712 | 36254496 | ID=cds.MS.gene71194.t1;Parent=MS.gene71194.t1 |
chr8.3 | exon | 36254782 | 36254976 | 36254782 | ID=MS.gene71194.t1.exon5;Parent=MS.gene71194.t1 |
chr8.3 | CDS | 36254782 | 36254976 | 36254782 | ID=cds.MS.gene71194.t1;Parent=MS.gene71194.t1 |
chr8.3 | exon | 36255430 | 36255751 | 36255430 | ID=MS.gene71194.t1.exon6;Parent=MS.gene71194.t1 |
chr8.3 | CDS | 36255430 | 36255751 | 36255430 | ID=cds.MS.gene71194.t1;Parent=MS.gene71194.t1 |
chr8.3 | exon | 36256375 | 36256682 | 36256375 | ID=MS.gene71194.t1.exon7;Parent=MS.gene71194.t1 |
chr8.3 | CDS | 36256375 | 36256682 | 36256375 | ID=cds.MS.gene71194.t1;Parent=MS.gene71194.t1 |
chr8.3 | exon | 36256769 | 36256837 | 36256769 | ID=MS.gene71194.t1.exon8;Parent=MS.gene71194.t1 |
chr8.3 | CDS | 36256769 | 36256837 | 36256769 | ID=cds.MS.gene71194.t1;Parent=MS.gene71194.t1 |
chr8.3 | exon | 36257457 | 36257516 | 36257457 | ID=MS.gene71194.t1.exon9;Parent=MS.gene71194.t1 |
chr8.3 | CDS | 36257457 | 36257516 | 36257457 | ID=cds.MS.gene71194.t1;Parent=MS.gene71194.t1 |
Gene Sequence |
Protein sequence |