Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71218.t1 | XP_024627494.1 | 86.1 | 330 | 36 | 4 | 1 | 322 | 1 | 328 | 1.10E-150 | 542.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71218.t1 | Q9C616 | 48.1 | 345 | 118 | 13 | 1 | 295 | 1 | 334 | 5.4e-61 | 236.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71218.t1 | G7LGX4 | 85.5 | 332 | 36 | 5 | 1 | 322 | 1 | 330 | 2.6e-149 | 537.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene71218.t1 | TF | GARP-G2-like |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71218.t1 | MTR_8g066310 | 88.580 | 324 | 25 | 5 | 1 | 314 | 1 | 322 | 0.0 | 540 |
| MS.gene71218.t1 | MTR_5g029470 | 56.136 | 383 | 99 | 13 | 1 | 322 | 1 | 375 | 9.09e-115 | 338 |
| MS.gene71218.t1 | MTR_3g064840 | 58.389 | 149 | 45 | 5 | 150 | 291 | 258 | 396 | 1.47e-43 | 155 |
| MS.gene71218.t1 | MTR_6g071625 | 52.597 | 154 | 52 | 6 | 150 | 299 | 184 | 320 | 6.61e-37 | 135 |
| MS.gene71218.t1 | MTR_1g021520 | 82.432 | 74 | 11 | 1 | 161 | 234 | 121 | 192 | 6.42e-34 | 126 |
| MS.gene71218.t1 | MTR_7g069660 | 44.828 | 116 | 58 | 2 | 127 | 242 | 36 | 145 | 4.36e-23 | 98.2 |
| MS.gene71218.t1 | MTR_0223s0040 | 65.000 | 60 | 19 | 1 | 165 | 224 | 17 | 74 | 4.09e-20 | 89.0 |
| MS.gene71218.t1 | MTR_1g112370 | 63.333 | 60 | 20 | 1 | 165 | 224 | 21 | 78 | 9.31e-20 | 88.6 |
| MS.gene71218.t1 | MTR_2g023580 | 65.152 | 66 | 20 | 2 | 159 | 224 | 49 | 111 | 4.67e-19 | 85.1 |
| MS.gene71218.t1 | MTR_8g086410 | 61.905 | 63 | 22 | 1 | 165 | 227 | 108 | 168 | 4.09e-18 | 84.7 |
| MS.gene71218.t1 | MTR_8g086410 | 61.905 | 63 | 22 | 1 | 165 | 227 | 110 | 170 | 4.24e-18 | 84.7 |
| MS.gene71218.t1 | MTR_2g084230 | 61.905 | 63 | 22 | 1 | 165 | 227 | 96 | 156 | 6.57e-18 | 83.2 |
| MS.gene71218.t1 | MTR_2g084230 | 61.905 | 63 | 22 | 1 | 165 | 227 | 96 | 156 | 9.87e-18 | 83.2 |
| MS.gene71218.t1 | MTR_7g098250 | 51.190 | 84 | 37 | 2 | 154 | 237 | 250 | 329 | 1.58e-17 | 83.2 |
| MS.gene71218.t1 | MTR_2g016220 | 50.588 | 85 | 31 | 2 | 165 | 240 | 88 | 170 | 4.80e-17 | 81.3 |
| MS.gene71218.t1 | MTR_2g016220 | 50.588 | 85 | 31 | 2 | 165 | 240 | 88 | 170 | 5.39e-17 | 81.3 |
| MS.gene71218.t1 | MTR_1g080330 | 46.875 | 96 | 35 | 3 | 151 | 234 | 148 | 239 | 9.71e-17 | 80.5 |
| MS.gene71218.t1 | MTR_1g080330 | 46.875 | 96 | 35 | 3 | 151 | 234 | 148 | 239 | 1.12e-16 | 79.3 |
| MS.gene71218.t1 | MTR_7g093030 | 52.857 | 70 | 29 | 2 | 168 | 237 | 214 | 279 | 1.52e-16 | 79.0 |
| MS.gene71218.t1 | MTR_7g115530 | 52.778 | 72 | 32 | 1 | 167 | 238 | 219 | 288 | 2.39e-16 | 78.6 |
| MS.gene71218.t1 | MTR_7g093030 | 52.857 | 70 | 29 | 2 | 168 | 237 | 214 | 279 | 2.46e-16 | 79.3 |
| MS.gene71218.t1 | MTR_7g115530 | 52.778 | 72 | 32 | 1 | 167 | 238 | 219 | 288 | 3.91e-16 | 78.2 |
| MS.gene71218.t1 | MTR_8g086410 | 62.069 | 58 | 20 | 1 | 165 | 222 | 110 | 165 | 4.72e-16 | 79.0 |
| MS.gene71218.t1 | MTR_7g115530 | 52.778 | 72 | 32 | 1 | 167 | 238 | 219 | 288 | 4.77e-16 | 79.0 |
| MS.gene71218.t1 | MTR_5g027440 | 67.273 | 55 | 16 | 1 | 167 | 221 | 26 | 78 | 6.56e-16 | 77.0 |
| MS.gene71218.t1 | MTR_3g450310 | 58.621 | 58 | 22 | 1 | 167 | 224 | 20 | 75 | 8.40e-16 | 75.5 |
| MS.gene71218.t1 | MTR_2g027860 | 51.899 | 79 | 34 | 2 | 168 | 246 | 51 | 125 | 2.08e-15 | 76.3 |
| MS.gene71218.t1 | MTR_7g115530 | 57.812 | 64 | 25 | 1 | 167 | 230 | 219 | 280 | 2.35e-15 | 76.3 |
| MS.gene71218.t1 | MTR_2g016220 | 48.315 | 89 | 31 | 3 | 165 | 240 | 88 | 174 | 4.30e-15 | 75.5 |
| MS.gene71218.t1 | MTR_7g088070 | 48.750 | 80 | 38 | 2 | 168 | 247 | 52 | 128 | 7.28e-15 | 73.9 |
| MS.gene71218.t1 | MTR_7g088070 | 55.385 | 65 | 27 | 1 | 168 | 232 | 52 | 114 | 9.83e-15 | 73.6 |
| MS.gene71218.t1 | MTR_1g053835 | 51.429 | 70 | 30 | 2 | 168 | 237 | 260 | 325 | 2.82e-14 | 73.6 |
| MS.gene71218.t1 | MTR_1g090670 | 60.345 | 58 | 21 | 1 | 167 | 224 | 45 | 100 | 4.33e-14 | 72.0 |
| MS.gene71218.t1 | MTR_6g444980 | 56.897 | 58 | 23 | 1 | 167 | 224 | 36 | 91 | 1.10e-13 | 71.2 |
| MS.gene71218.t1 | MTR_6g444980 | 56.897 | 58 | 23 | 1 | 167 | 224 | 36 | 91 | 1.14e-13 | 71.2 |
| MS.gene71218.t1 | MTR_4g081710 | 37.168 | 113 | 67 | 3 | 167 | 277 | 18 | 128 | 1.49e-13 | 70.9 |
| MS.gene71218.t1 | MTR_5g041350 | 42.500 | 80 | 44 | 1 | 167 | 246 | 16 | 93 | 1.53e-13 | 70.9 |
| MS.gene71218.t1 | MTR_2g027800 | 58.621 | 58 | 22 | 1 | 167 | 224 | 40 | 95 | 1.78e-13 | 70.5 |
| MS.gene71218.t1 | MTR_7g115530 | 61.111 | 54 | 19 | 1 | 167 | 220 | 219 | 270 | 2.85e-13 | 69.7 |
| MS.gene71218.t1 | MTR_2g027800 | 60.000 | 55 | 20 | 1 | 167 | 221 | 40 | 92 | 3.18e-13 | 69.3 |
| MS.gene71218.t1 | MTR_6g032990 | 58.182 | 55 | 21 | 1 | 167 | 221 | 43 | 95 | 4.32e-13 | 69.7 |
| MS.gene71218.t1 | MTR_7g115530 | 63.462 | 52 | 17 | 1 | 167 | 218 | 219 | 268 | 4.98e-13 | 68.6 |
| MS.gene71218.t1 | MTR_2g086450 | 55.172 | 58 | 24 | 1 | 167 | 224 | 46 | 101 | 9.92e-13 | 68.6 |
| MS.gene71218.t1 | MTR_7g068600 | 54.237 | 59 | 26 | 1 | 168 | 225 | 15 | 73 | 2.02e-12 | 66.2 |
| MS.gene71218.t1 | MTR_1g053830 | 43.243 | 74 | 38 | 2 | 168 | 241 | 20 | 89 | 1.71e-11 | 60.5 |
| MS.gene71218.t1 | MTR_1g053800 | 44.048 | 84 | 40 | 2 | 139 | 222 | 155 | 231 | 6.36e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71218.t1 | AT1G32240 | 49.275 | 345 | 114 | 13 | 1 | 295 | 1 | 334 | 1.95e-80 | 249 |
| MS.gene71218.t1 | AT1G32240 | 49.275 | 345 | 114 | 13 | 1 | 295 | 1 | 334 | 5.25e-80 | 248 |
| MS.gene71218.t1 | AT4G17695 | 38.485 | 330 | 129 | 11 | 1 | 308 | 1 | 278 | 8.53e-48 | 163 |
| MS.gene71218.t1 | AT5G16560 | 37.349 | 332 | 146 | 9 | 8 | 291 | 20 | 337 | 9.83e-45 | 157 |
| MS.gene71218.t1 | AT5G42630 | 75.325 | 77 | 17 | 1 | 161 | 237 | 100 | 174 | 1.73e-33 | 123 |
| MS.gene71218.t1 | AT5G42630 | 77.333 | 75 | 15 | 1 | 161 | 235 | 100 | 172 | 6.38e-33 | 123 |
| MS.gene71218.t1 | AT1G32240 | 57.292 | 96 | 31 | 3 | 201 | 295 | 1 | 87 | 4.26e-26 | 101 |
| MS.gene71218.t1 | AT2G38300 | 39.490 | 157 | 77 | 6 | 135 | 288 | 29 | 170 | 1.14e-20 | 91.3 |
| MS.gene71218.t1 | AT4G04605 | 63.492 | 63 | 21 | 1 | 165 | 227 | 13 | 73 | 1.99e-20 | 88.6 |
| MS.gene71218.t1 | AT1G14600 | 67.213 | 61 | 18 | 1 | 166 | 226 | 23 | 81 | 1.31e-19 | 87.0 |
| MS.gene71218.t1 | AT2G02060 | 71.429 | 56 | 14 | 1 | 166 | 221 | 29 | 82 | 3.10e-19 | 85.9 |
| MS.gene71218.t1 | AT2G02060 | 71.429 | 56 | 14 | 1 | 166 | 221 | 29 | 82 | 3.10e-19 | 85.9 |
| MS.gene71218.t1 | AT5G45580 | 46.729 | 107 | 46 | 4 | 167 | 265 | 8 | 111 | 1.18e-18 | 84.3 |
| MS.gene71218.t1 | AT5G45580 | 46.729 | 107 | 46 | 4 | 167 | 265 | 24 | 127 | 1.69e-18 | 84.3 |
| MS.gene71218.t1 | AT4G04580 | 62.069 | 58 | 20 | 1 | 167 | 224 | 15 | 70 | 1.38e-16 | 76.6 |
| MS.gene71218.t1 | AT2G40260 | 61.972 | 71 | 23 | 3 | 159 | 229 | 76 | 142 | 1.74e-16 | 80.1 |
| MS.gene71218.t1 | AT2G42660 | 62.712 | 59 | 20 | 1 | 167 | 225 | 51 | 107 | 4.22e-16 | 77.0 |
| MS.gene71218.t1 | AT2G01060 | 53.165 | 79 | 32 | 2 | 168 | 246 | 17 | 90 | 9.65e-16 | 76.6 |
| MS.gene71218.t1 | AT4G04555 | 58.333 | 60 | 23 | 1 | 165 | 224 | 13 | 70 | 3.03e-15 | 71.2 |
| MS.gene71218.t1 | AT4G28610 | 58.824 | 68 | 23 | 3 | 168 | 234 | 227 | 290 | 3.81e-15 | 75.9 |
| MS.gene71218.t1 | AT3G12730 | 60.345 | 58 | 21 | 1 | 167 | 224 | 24 | 79 | 7.58e-15 | 73.2 |
| MS.gene71218.t1 | AT5G29000 | 51.351 | 74 | 34 | 1 | 168 | 241 | 233 | 304 | 1.86e-14 | 73.2 |
| MS.gene71218.t1 | AT5G29000 | 61.404 | 57 | 20 | 1 | 168 | 224 | 190 | 244 | 3.65e-14 | 72.8 |
| MS.gene71218.t1 | AT5G29000 | 61.404 | 57 | 20 | 1 | 168 | 224 | 190 | 244 | 3.65e-14 | 72.8 |
| MS.gene71218.t1 | AT3G24120 | 60.000 | 55 | 20 | 1 | 167 | 221 | 42 | 94 | 3.67e-14 | 72.4 |
| MS.gene71218.t1 | AT3G24120 | 60.000 | 55 | 20 | 1 | 167 | 221 | 42 | 94 | 3.71e-14 | 72.0 |
| MS.gene71218.t1 | AT5G29000 | 61.404 | 57 | 20 | 1 | 168 | 224 | 233 | 287 | 5.06e-14 | 72.8 |
| MS.gene71218.t1 | AT3G04450 | 59.649 | 57 | 21 | 1 | 168 | 224 | 240 | 294 | 6.15e-14 | 71.6 |
| MS.gene71218.t1 | AT3G04450 | 59.649 | 57 | 21 | 1 | 168 | 224 | 200 | 254 | 9.23e-14 | 72.0 |
| MS.gene71218.t1 | AT3G04450 | 59.649 | 57 | 21 | 1 | 168 | 224 | 200 | 254 | 9.23e-14 | 72.0 |
| MS.gene71218.t1 | AT3G04450 | 59.649 | 57 | 21 | 1 | 168 | 224 | 240 | 294 | 9.55e-14 | 72.0 |
| MS.gene71218.t1 | AT4G13640 | 58.182 | 55 | 21 | 1 | 167 | 221 | 38 | 90 | 1.05e-13 | 70.9 |
| MS.gene71218.t1 | AT4G13640 | 58.182 | 55 | 21 | 1 | 167 | 221 | 38 | 90 | 1.14e-13 | 70.9 |
| MS.gene71218.t1 | AT1G79430 | 56.897 | 58 | 23 | 1 | 167 | 224 | 35 | 90 | 1.18e-13 | 71.2 |
| MS.gene71218.t1 | AT5G06800 | 51.613 | 62 | 28 | 1 | 163 | 224 | 189 | 248 | 4.37e-13 | 68.9 |
| MS.gene71218.t1 | AT2G20400 | 45.263 | 95 | 46 | 3 | 168 | 260 | 233 | 323 | 4.97e-13 | 69.7 |
| MS.gene71218.t1 | AT2G20400 | 58.065 | 62 | 24 | 1 | 168 | 229 | 233 | 292 | 5.94e-13 | 69.3 |
| MS.gene71218.t1 | AT5G18240 | 53.448 | 58 | 25 | 1 | 167 | 224 | 46 | 101 | 8.93e-13 | 68.9 |
| MS.gene71218.t1 | AT5G18240 | 53.448 | 58 | 25 | 1 | 167 | 224 | 46 | 101 | 8.93e-13 | 68.9 |
| MS.gene71218.t1 | AT5G18240 | 53.448 | 58 | 25 | 1 | 167 | 224 | 46 | 101 | 1.01e-12 | 68.6 |
| MS.gene71218.t1 | AT5G18240 | 53.448 | 58 | 25 | 1 | 167 | 224 | 46 | 101 | 1.05e-12 | 68.6 |
| MS.gene71218.t1 | AT5G18240 | 53.448 | 58 | 25 | 1 | 167 | 224 | 46 | 101 | 1.05e-12 | 68.6 |
| MS.gene71218.t1 | AT5G06800 | 51.613 | 62 | 28 | 1 | 163 | 224 | 189 | 248 | 1.05e-12 | 68.6 |
| MS.gene71218.t1 | AT5G06800 | 51.613 | 62 | 28 | 1 | 163 | 224 | 189 | 248 | 1.11e-12 | 68.6 |
| MS.gene71218.t1 | AT3G04030 | 51.724 | 58 | 26 | 1 | 167 | 224 | 46 | 101 | 1.15e-12 | 68.6 |
| MS.gene71218.t1 | AT3G04030 | 51.724 | 58 | 26 | 1 | 167 | 224 | 46 | 101 | 1.26e-12 | 68.6 |
| MS.gene71218.t1 | AT3G13040 | 59.649 | 57 | 21 | 1 | 168 | 224 | 243 | 297 | 2.58e-12 | 67.8 |
| MS.gene71218.t1 | AT3G13040 | 59.649 | 57 | 21 | 1 | 168 | 224 | 243 | 297 | 2.58e-12 | 67.8 |
| MS.gene71218.t1 | AT3G13040 | 59.649 | 57 | 21 | 1 | 168 | 224 | 243 | 297 | 2.58e-12 | 67.8 |
| MS.gene71218.t1 | AT2G06020 | 54.098 | 61 | 26 | 1 | 168 | 228 | 88 | 146 | 2.91e-12 | 66.6 |
| MS.gene71218.t1 | AT1G69580 | 50.000 | 58 | 27 | 1 | 167 | 224 | 35 | 90 | 6.78e-12 | 65.9 |
| MS.gene71218.t1 | AT1G69580 | 50.000 | 58 | 27 | 1 | 167 | 224 | 35 | 90 | 7.14e-12 | 65.9 |
Find 63 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCCTTCTCTTTCCAATCTA+AGG | 0.141226 | 8.3:+36586928 | MS.gene71218:CDS |
| AGTTGGATGATTTAGGATTT+TGG | 0.160388 | 8.3:+36586862 | MS.gene71218:CDS |
| ATTAGCTCAAGAACTGATTT+TGG | 0.213448 | 8.3:-36587585 | None:intergenic |
| CAAGAAGAGTTGGATGATTT+AGG | 0.214915 | 8.3:+36586855 | MS.gene71218:CDS |
| TACACTGGAATTCCTCTTAT+AGG | 0.266139 | 8.3:-36587083 | None:intergenic |
| ATTGGAAAGAGAAGGGTTAA+AGG | 0.279584 | 8.3:-36586922 | None:intergenic |
| ACATGTTAAATCTCATTTAC+AGG | 0.296664 | 8.3:+36587638 | MS.gene71218:CDS |
| AATAATGCAATAGAAGGATT+AGG | 0.317571 | 8.3:-36587116 | None:intergenic |
| CTTGATGTTTGTTTGCTGTT+TGG | 0.333293 | 8.3:-36586810 | None:intergenic |
| CTAATCAGAAAGTGATTCTA+AGG | 0.336916 | 8.3:-36590823 | None:intergenic |
| AAAATCAGTTCTTGAGCTAA+TGG | 0.346801 | 8.3:+36587587 | MS.gene71218:CDS |
| GAAGTATTTGGCTCCATGTT+TGG | 0.349327 | 8.3:+36590797 | MS.gene71218:intron |
| ATTTCTGCATCCAACTTAAC+TGG | 0.356971 | 8.3:-36589353 | None:intergenic |
| ATAATGCAATAGAAGGATTA+GGG | 0.367798 | 8.3:-36587115 | None:intergenic |
| AATGAGATTTAACATGTGAT+AGG | 0.371948 | 8.3:-36587632 | None:intergenic |
| GCATTTGGAGCAAATCTTCC+AGG | 0.379781 | 8.3:+36589402 | MS.gene71218:CDS |
| CTAGCTCTTCACTTAAGCTT+TGG | 0.384010 | 8.3:-36587049 | None:intergenic |
| CTGATTTGCAATGATAAATC+TGG | 0.389260 | 8.3:-36586783 | None:intergenic |
| TGAGAAAATAATGCAATAGA+AGG | 0.401679 | 8.3:-36587122 | None:intergenic |
| TTTCCAACAGGATGGACCTT+TGG | 0.414851 | 8.3:-36590702 | None:intergenic |
| AGAAGAAGGAGCCCTTAGAT+TGG | 0.430703 | 8.3:-36586940 | None:intergenic |
| ATGTATGACAATGGTTCATC+TGG | 0.431132 | 8.3:+36589272 | MS.gene71218:CDS |
| GCTCTCACGCTGCGCTTTGA+AGG | 0.432112 | 8.3:-36587236 | None:intergenic |
| CCCTTCTCTTTCCAATCTAA+GGG | 0.458265 | 8.3:+36586929 | MS.gene71218:CDS |
| TAGAGGTTTGAAGAAGAAGA+AGG | 0.460058 | 8.3:-36586954 | None:intergenic |
| TACATTTAAATTAGATGTAC+CGG | 0.469428 | 8.3:+36589084 | MS.gene71218:intron |
| TAATGATCTGCCAGTTAAGT+TGG | 0.471479 | 8.3:+36589343 | MS.gene71218:CDS |
| TGGAAATGTGTCTTCTCTTG+AGG | 0.477195 | 8.3:+36590719 | MS.gene71218:CDS |
| TACAGATGATCAAGAAGAGT+TGG | 0.483197 | 8.3:+36586845 | MS.gene71218:CDS |
| GGGTTTCTCAAACCTATAAG+AGG | 0.499817 | 8.3:+36587071 | MS.gene71218:CDS |
| AGAGAAGACACATTTCCAAC+AGG | 0.502518 | 8.3:-36590714 | None:intergenic |
| GATAGACCACCAGCATCATC+AGG | 0.511405 | 8.3:+36589122 | MS.gene71218:CDS |
| CAAAGCTTAAGTGAAGAGCT+AGG | 0.513464 | 8.3:+36587050 | MS.gene71218:CDS |
| ATGAGATTTAACATGTGATA+GGG | 0.516911 | 8.3:-36587631 | None:intergenic |
| AATGATAAATCTGGTTGTGC+TGG | 0.518052 | 8.3:-36586774 | None:intergenic |
| GCCCTTAGATTGGAAAGAGA+AGG | 0.518621 | 8.3:-36586930 | None:intergenic |
| TGGTTGAAAAGAGTTGTTGT+TGG | 0.519831 | 8.3:-36587015 | None:intergenic |
| TCTTGAGCTAATGGATGTAA+AGG | 0.520433 | 8.3:+36587596 | MS.gene71218:CDS |
| AACAGGGAAGCTTGGTTGCA+TGG | 0.521093 | 8.3:+36590675 | MS.gene71218:intron |
| TTGGTAGTAACAGGGAAGCT+TGG | 0.536028 | 8.3:+36590667 | MS.gene71218:intron |
| AAGCCAAAGGTCCATCCTGT+TGG | 0.539624 | 8.3:+36590699 | MS.gene71218:CDS |
| GTGGTAGTCCAACGCATCCT+CGG | 0.547370 | 8.3:-36587260 | None:intergenic |
| AAAGCTTAAGTGAAGAGCTA+GGG | 0.550097 | 8.3:+36587051 | MS.gene71218:CDS |
| GAAGCATCAAAGAGTGGTTG+TGG | 0.559906 | 8.3:-36587146 | None:intergenic |
| TGAGAGCTCCGAGGATGCGT+TGG | 0.564823 | 8.3:+36587252 | MS.gene71218:CDS |
| CCCTTAGATTGGAAAGAGAA+GGG | 0.569429 | 8.3:-36586929 | None:intergenic |
| GCAAACAAACATCAAGTTGG+AGG | 0.579839 | 8.3:+36586817 | MS.gene71218:CDS |
| ACAGCAAACAAACATCAAGT+TGG | 0.580847 | 8.3:+36586814 | MS.gene71218:CDS |
| TATCACTAACCTGATGATGC+TGG | 0.583542 | 8.3:-36589131 | None:intergenic |
| GGTTAGGTATGAGATTGTAG+AGG | 0.587027 | 8.3:-36586971 | None:intergenic |
| ATGATAAATCTGGTTGTGCT+GGG | 0.589384 | 8.3:-36586773 | None:intergenic |
| GATTCTAAGGAGTCCAAACA+TGG | 0.595029 | 8.3:-36590810 | None:intergenic |
| AAGACACATTTCCAACAGGA+TGG | 0.611319 | 8.3:-36590710 | None:intergenic |
| AACAAAGCGATTATGAAGAG+TGG | 0.613873 | 8.3:-36587279 | None:intergenic |
| CAATCTGATATGTATGACAA+TGG | 0.620941 | 8.3:+36589263 | MS.gene71218:CDS |
| TTGGTTGCATGGTAAGCCAA+AGG | 0.634514 | 8.3:+36590686 | MS.gene71218:CDS |
| TTGACATAAATTCTTCAACA+AGG | 0.639893 | 8.3:+36589318 | MS.gene71218:CDS |
| TGAGATCAAAGTTGTTGCCG+CGG | 0.651120 | 8.3:+36587210 | MS.gene71218:CDS |
| GAAGCAGAAGCATCAAAGAG+TGG | 0.673679 | 8.3:-36587152 | None:intergenic |
| CACTAACCTGATGATGCTGG+TGG | 0.677669 | 8.3:-36589128 | None:intergenic |
| CTGCGCTTTGAAGGAAACCG+CGG | 0.685322 | 8.3:-36587227 | None:intergenic |
| TTTAAATTAGATGTACCGGA+CGG | 0.698923 | 8.3:+36589088 | MS.gene71218:intron |
| AGCGCAGCGTGAGAGCTCCG+AGG | 0.728362 | 8.3:+36587243 | MS.gene71218:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAATACAGTATATATTTA+TGG | + | chr8.3:36589430-36589449 | MS.gene71218:intron | 10.0% |
| !! | TTCATTAATATAGTTTAAAT+TGG | + | chr8.3:36588915-36588934 | MS.gene71218:intron | 10.0% |
| !!! | ATTATTTTTATATTTAGCTA+TGG | + | chr8.3:36587932-36587951 | MS.gene71218:intron | 10.0% |
| !!! | CTATTTTTAAAATAGATAAT+AGG | - | chr8.3:36589863-36589882 | None:intergenic | 10.0% |
| !!! | TATAAAAATAATTTTTGCTA+AGG | - | chr8.3:36587924-36587943 | None:intergenic | 10.0% |
| !!! | TCTCTTTATATATATTTTTT+CGG | - | chr8.3:36590481-36590500 | None:intergenic | 10.0% |
| !!! | TTTAGAATTTTAACAAAATA+TGG | + | chr8.3:36587439-36587458 | MS.gene71218:intron | 10.0% |
| !!! | TTTTAAAACAACTAAAAAAA+AGG | - | chr8.3:36588737-36588756 | None:intergenic | 10.0% |
| !! | GAAAAAATATATATAAAGAG+AGG | + | chr8.3:36590480-36590499 | MS.gene71218:intron | 15.0% |
| !! | GTAATAAAAAATTACTTTCA+TGG | - | chr8.3:36587328-36587347 | None:intergenic | 15.0% |
| !! | TATTTCATTTAAATTGATAG+TGG | - | chr8.3:36588952-36588971 | None:intergenic | 15.0% |
| !!! | AATTATTAGTGTTTTGAAAA+GGG | - | chr8.3:36586995-36587014 | None:intergenic | 15.0% |
| !!! | AATTTTCATTTTATCTTTCA+GGG | + | chr8.3:36587556-36587575 | MS.gene71218:intron | 15.0% |
| !!! | ATATTATATTTTCTTAACCT+TGG | + | chr8.3:36589456-36589475 | MS.gene71218:intron | 15.0% |
| !!! | TAATTTTCATTTTATCTTTC+AGG | + | chr8.3:36587555-36587574 | MS.gene71218:intron | 15.0% |
| !!! | TTATTTTTCATTGAAGTATT+TGG | + | chr8.3:36590785-36590804 | MS.gene71218:intron | 15.0% |
| !! | AAAACAACTAAAAAAAAGGA+TGG | - | chr8.3:36588733-36588752 | None:intergenic | 20.0% |
| !! | AAGAAAAATCAAGAAAATAG+AGG | - | chr8.3:36589223-36589242 | None:intergenic | 20.0% |
| !! | AAGAACTTAAAATAACATTG+AGG | - | chr8.3:36587737-36587756 | None:intergenic | 20.0% |
| !! | AAGATTTATTGATCAAATGA+TGG | + | chr8.3:36588976-36588995 | MS.gene71218:intron | 20.0% |
| !! | AATTTAAAAATGTTTACACG+CGG | + | chr8.3:36590138-36590157 | MS.gene71218:intron | 20.0% |
| !! | AGAACTTAAAATAACATTGA+GGG | - | chr8.3:36587736-36587755 | None:intergenic | 20.0% |
| !! | ATAAAGAAAAACATAGCATT+TGG | + | chr8.3:36589387-36589406 | MS.gene71218:CDS | 20.0% |
| !! | ATAACAGTTCAAAAATAAAG+AGG | - | chr8.3:36590769-36590788 | None:intergenic | 20.0% |
| !! | ATACTGTATTATATATTACC+TGG | - | chr8.3:36589423-36589442 | None:intergenic | 20.0% |
| !! | ATAGTAGATGAATGAATTTA+TGG | - | chr8.3:36589183-36589202 | None:intergenic | 20.0% |
| !! | CTCAATTTGTAATTAGTATT+AGG | + | chr8.3:36589157-36589176 | MS.gene71218:intron | 20.0% |
| !! | GAACAAAGATATATATTACT+CGG | - | chr8.3:36589514-36589533 | None:intergenic | 20.0% |
| !! | TAACAGTTCAAAAATAAAGA+GGG | - | chr8.3:36590768-36590787 | None:intergenic | 20.0% |
| !! | TACATTTAAATTAGATGTAC+CGG | + | chr8.3:36589084-36589103 | MS.gene71218:intron | 20.0% |
| !! | TATATATTTGTTTATGTGCA+GGG | - | chr8.3:36589672-36589691 | None:intergenic | 20.0% |
| !! | TTTATATTGCACAAGAAAAT+AGG | + | chr8.3:36588183-36588202 | MS.gene71218:intron | 20.0% |
| !!! | ATTTTCATTTTATCTTTCAG+GGG | + | chr8.3:36587557-36587576 | MS.gene71218:intron | 20.0% |
| !!! | CTTTATATATATTTTTTCGG+TGG | - | chr8.3:36590478-36590497 | None:intergenic | 20.0% |
| !!! | GAATTATTAGTGTTTTGAAA+AGG | - | chr8.3:36586996-36587015 | None:intergenic | 20.0% |
| !!! | GATTTTTCTTGTGTTTAAAA+TGG | + | chr8.3:36589233-36589252 | MS.gene71218:intron | 20.0% |
| !!! | GTTTTTCTTTATCTTGATTA+GGG | - | chr8.3:36589379-36589398 | None:intergenic | 20.0% |
| !!! | TAGTCTTAAAGCTAATTTTT+TGG | + | chr8.3:36589964-36589983 | MS.gene71218:intron | 20.0% |
| !!! | TGTAGTTTTTGTCAAAATTA+AGG | - | chr8.3:36587418-36587437 | None:intergenic | 20.0% |
| !!! | TGTTTTTCTTTATCTTGATT+AGG | - | chr8.3:36589380-36589399 | None:intergenic | 20.0% |
| !!! | TTTTGATGAGATATAATGAT+TGG | - | chr8.3:36590270-36590289 | None:intergenic | 20.0% |
| ! | AAATGATAATCAACCAACAA+TGG | - | chr8.3:36589537-36589556 | None:intergenic | 25.0% |
| ! | AACTAGCAGAATAAGAAAAA+GGG | + | chr8.3:36590550-36590569 | MS.gene71218:intron | 25.0% |
| ! | AATAATGCAATAGAAGGATT+AGG | - | chr8.3:36587119-36587138 | None:intergenic | 25.0% |
| ! | AATATGAGAATCTTAACATC+TGG | - | chr8.3:36590107-36590126 | None:intergenic | 25.0% |
| ! | AATGAGATTTAACATGTGAT+AGG | - | chr8.3:36587635-36587654 | None:intergenic | 25.0% |
| ! | AATGATAATCAACCAACAAT+GGG | - | chr8.3:36589536-36589555 | None:intergenic | 25.0% |
| ! | ACATGTTAAATCTCATTTAC+AGG | + | chr8.3:36587638-36587657 | MS.gene71218:CDS | 25.0% |
| ! | ATAATGCAATAGAAGGATTA+GGG | - | chr8.3:36587118-36587137 | None:intergenic | 25.0% |
| ! | ATAGAAACATGTAAGAAAGA+AGG | - | chr8.3:36587520-36587539 | None:intergenic | 25.0% |
| ! | ATAGAATTAAAGATTGCAGT+TGG | + | chr8.3:36590203-36590222 | MS.gene71218:intron | 25.0% |
| ! | ATAGAGATATCTCTTTCTTT+AGG | + | chr8.3:36589879-36589898 | MS.gene71218:intron | 25.0% |
| ! | ATATATTCTTTACTAGCTAG+TGG | + | chr8.3:36589795-36589814 | MS.gene71218:intron | 25.0% |
| ! | ATGAGATTTAACATGTGATA+GGG | - | chr8.3:36587634-36587653 | None:intergenic | 25.0% |
| ! | CACAACAAATCATATGAATT+TGG | - | chr8.3:36588894-36588913 | None:intergenic | 25.0% |
| ! | CCATGTTTATATATAAAGAG+AGG | + | chr8.3:36590449-36590468 | MS.gene71218:intron | 25.0% |
| ! | CCTCTCTTTATATATAAACA+TGG | - | chr8.3:36590452-36590471 | None:intergenic | 25.0% |
| ! | CTATATATTTGTTTATGTGC+AGG | - | chr8.3:36589673-36589692 | None:intergenic | 25.0% |
| ! | CTGCACATAAACAAATATAT+AGG | + | chr8.3:36589671-36589690 | MS.gene71218:intron | 25.0% |
| ! | GAATTTACTCAATTGATACA+TGG | - | chr8.3:36588392-36588411 | None:intergenic | 25.0% |
| ! | GTTACATAGATACTATATCA+GGG | + | chr8.3:36588650-36588669 | MS.gene71218:intron | 25.0% |
| ! | TAGAAACATGTAAGAAAGAA+GGG | - | chr8.3:36587519-36587538 | None:intergenic | 25.0% |
| ! | TATATTCTTTACTAGCTAGT+GGG | + | chr8.3:36589796-36589815 | MS.gene71218:intron | 25.0% |
| ! | TGAACTCAAACTATATCAAT+TGG | - | chr8.3:36588483-36588502 | None:intergenic | 25.0% |
| ! | TGAGAAAATAATGCAATAGA+AGG | - | chr8.3:36587125-36587144 | None:intergenic | 25.0% |
| ! | TGTTACATAGATACTATATC+AGG | + | chr8.3:36588649-36588668 | MS.gene71218:intron | 25.0% |
| ! | TTGACATAAATTCTTCAACA+AGG | + | chr8.3:36589318-36589337 | MS.gene71218:CDS | 25.0% |
| !! | ACAATTTTCTCCCTTAATTA+GGG | - | chr8.3:36588011-36588030 | None:intergenic | 25.0% |
| !! | ACACATTTAATCAAAAGTGT+TGG | + | chr8.3:36588626-36588645 | MS.gene71218:intron | 25.0% |
| !! | TACAATTTTCTCCCTTAATT+AGG | - | chr8.3:36588012-36588031 | None:intergenic | 25.0% |
| !! | TGTATAGAGTATCATTAACA+CGG | - | chr8.3:36589068-36589087 | None:intergenic | 25.0% |
| !!! | TCTAATTCTCTGAAATACTT+TGG | - | chr8.3:36590364-36590383 | None:intergenic | 25.0% |
| AAAATCAGTTCTTGAGCTAA+TGG | + | chr8.3:36587587-36587606 | MS.gene71218:CDS | 30.0% | |
| AAATATTCTCTCCATGTGTT+TGG | + | chr8.3:36590648-36590667 | MS.gene71218:intron | 30.0% | |
| ACACAAACATGTAAGAAAGA+AGG | - | chr8.3:36587351-36587370 | None:intergenic | 30.0% | |
| ACTAGCAGAATAAGAAAAAG+GGG | + | chr8.3:36590551-36590570 | MS.gene71218:intron | 30.0% | |
| ACTATATCAATTGGATCGTT+TGG | - | chr8.3:36588474-36588493 | None:intergenic | 30.0% | |
| ATATAATTACCCCATCATCA+TGG | - | chr8.3:36589777-36589796 | None:intergenic | 30.0% | |
| ATCTTCAACCTCAATTTCAA+AGG | - | chr8.3:36587767-36587786 | None:intergenic | 30.0% | |
| ATGGAAAATAAACTTGCGTA+TGG | + | chr8.3:36588995-36589014 | MS.gene71218:intron | 30.0% | |
| ATTGATACATGGCTGTATAA+AGG | - | chr8.3:36588381-36588400 | None:intergenic | 30.0% | |
| CAACTAAAAAAAAGGATGGT+CGG | - | chr8.3:36588729-36588748 | None:intergenic | 30.0% | |
| CAACTAGCAGAATAAGAAAA+AGG | + | chr8.3:36590549-36590568 | MS.gene71218:intron | 30.0% | |
| CAATCTGATATGTATGACAA+TGG | + | chr8.3:36589263-36589282 | MS.gene71218:CDS | 30.0% | |
| CACAAACATGTAAGAAAGAA+GGG | - | chr8.3:36587350-36587369 | None:intergenic | 30.0% | |
| CTAATCAGAAAGTGATTCTA+AGG | - | chr8.3:36590826-36590845 | None:intergenic | 30.0% | |
| GAGAAATTCAAAATGAGTCT+TGG | + | chr8.3:36588104-36588123 | MS.gene71218:intron | 30.0% | |
| GGATATGTTTCAAATTCCAA+TGG | + | chr8.3:36587891-36587910 | MS.gene71218:intron | 30.0% | |
| TAAACATGGTGCAACAAATT+TGG | - | chr8.3:36590438-36590457 | None:intergenic | 30.0% | |
| TAACAAAATTACGACAAGCA+CGG | - | chr8.3:36587491-36587510 | None:intergenic | 30.0% | |
| TAAGGGTAGCTATTATTACA+TGG | + | chr8.3:36589921-36589940 | MS.gene71218:intron | 30.0% | |
| TATATCTTTGTTCCCATTGT+TGG | + | chr8.3:36589521-36589540 | MS.gene71218:intron | 30.0% | |
| TGGAAAATAAACTTGCGTAT+GGG | + | chr8.3:36588996-36589015 | MS.gene71218:intron | 30.0% | |
| TTGAAAAATGTGACTAACCA+TGG | - | chr8.3:36588304-36588323 | None:intergenic | 30.0% | |
| TTGCTAAGGAAATTAACCAT+TGG | - | chr8.3:36587910-36587929 | None:intergenic | 30.0% | |
| TTTAAATTAGATGTACCGGA+CGG | + | chr8.3:36589088-36589107 | MS.gene71218:intron | 30.0% | |
| TTTGTGGGGCTAATTTATAA+GGG | + | chr8.3:36589904-36589923 | MS.gene71218:intron | 30.0% | |
| ! | AAGACTAAGTTTTCCAACTA+TGG | - | chr8.3:36589951-36589970 | None:intergenic | 30.0% |
| ! | AGACTAAGTTTTCCAACTAT+GGG | - | chr8.3:36589950-36589969 | None:intergenic | 30.0% |
| ! | CTAGTTTGTAATGTAGTACA+AGG | + | chr8.3:36587854-36587873 | MS.gene71218:intron | 30.0% |
| ! | CTGATTTGCAATGATAAATC+TGG | - | chr8.3:36586786-36586805 | None:intergenic | 30.0% |
| ! | TCTTGTGTTTAAAATGGAGT+AGG | + | chr8.3:36589239-36589258 | MS.gene71218:intron | 30.0% |
| ! | TTTTGTGGGGCTAATTTATA+AGG | + | chr8.3:36589903-36589922 | MS.gene71218:intron | 30.0% |
| !! | ACCTTACAAGTCGATTTTAT+AGG | + | chr8.3:36590173-36590192 | MS.gene71218:intron | 30.0% |
| !! | AGTTGGATGATTTAGGATTT+TGG | + | chr8.3:36586862-36586881 | MS.gene71218:CDS | 30.0% |
| !! | ATTAGCTCAAGAACTGATTT+TGG | - | chr8.3:36587588-36587607 | None:intergenic | 30.0% |
| !! | CAGTATGCTTTTTGTATACA+TGG | + | chr8.3:36590611-36590630 | MS.gene71218:intron | 30.0% |
| !! | CCTTACAAGTCGATTTTATA+GGG | + | chr8.3:36590174-36590193 | MS.gene71218:intron | 30.0% |
| !!! | AAGCTTTGGTTTTGATGAAA+TGG | - | chr8.3:36587038-36587057 | None:intergenic | 30.0% |
| !!! | CTCTTTCTTTAGGATTTTGT+GGG | + | chr8.3:36589889-36589908 | MS.gene71218:intron | 30.0% |
| !!! | TCTCTTTCTTTAGGATTTTG+TGG | + | chr8.3:36589888-36589907 | MS.gene71218:intron | 30.0% |
| !!! | TCTTTCTTTAGGATTTTGTG+GGG | + | chr8.3:36589890-36589909 | MS.gene71218:intron | 30.0% |
| !!! | TTAGTGTTTTGAAAAGGGTT+AGG | - | chr8.3:36586990-36587009 | None:intergenic | 30.0% |
| AAAGCTTAAGTGAAGAGCTA+GGG | + | chr8.3:36587051-36587070 | MS.gene71218:CDS | 35.0% | |
| AACAAAGCGATTATGAAGAG+TGG | - | chr8.3:36587282-36587301 | None:intergenic | 35.0% | |
| AAGATGTGATATGGATCACA+TGG | + | chr8.3:36590505-36590524 | MS.gene71218:intron | 35.0% | |
| AATGATAAATCTGGTTGTGC+TGG | - | chr8.3:36586777-36586796 | None:intergenic | 35.0% | |
| AATTTGGTTATGACTCGTGA+GGG | - | chr8.3:36588878-36588897 | None:intergenic | 35.0% | |
| ACAGCAAACAAACATCAAGT+TGG | + | chr8.3:36586814-36586833 | MS.gene71218:CDS | 35.0% | |
| AGAATGAACCACCCTAATTA+AGG | + | chr8.3:36587997-36588016 | MS.gene71218:intron | 35.0% | |
| AGAGAGGTAAAGATGTGATA+TGG | + | chr8.3:36590496-36590515 | MS.gene71218:intron | 35.0% | |
| AGATGTGATATGGATCACAT+GGG | + | chr8.3:36590506-36590525 | MS.gene71218:intron | 35.0% | |
| ATGAGAATCTTAACATCTGG+AGG | - | chr8.3:36590104-36590123 | None:intergenic | 35.0% | |
| ATGATAAATCTGGTTGTGCT+GGG | - | chr8.3:36586776-36586795 | None:intergenic | 35.0% | |
| ATGCAGAAAACAAATGGTTC+TGG | - | chr8.3:36588349-36588368 | None:intergenic | 35.0% | |
| ATGTATGACAATGGTTCATC+TGG | + | chr8.3:36589272-36589291 | MS.gene71218:CDS | 35.0% | |
| ATTGGAAAGAGAAGGGTTAA+AGG | - | chr8.3:36586925-36586944 | None:intergenic | 35.0% | |
| ATTTCTGCATCCAACTTAAC+TGG | - | chr8.3:36589356-36589375 | None:intergenic | 35.0% | |
| CAAGAAGAGTTGGATGATTT+AGG | + | chr8.3:36586855-36586874 | MS.gene71218:CDS | 35.0% | |
| CATAGATAAAGAAATCCCCA+CGG | - | chr8.3:36589483-36589502 | None:intergenic | 35.0% | |
| CGGTAAGTTTGACAAAATCA+CGG | - | chr8.3:36587471-36587490 | None:intergenic | 35.0% | |
| CTATGTCAACGTGTTTGTAT+CGG | - | chr8.3:36588540-36588559 | None:intergenic | 35.0% | |
| GAATGAACCACCCTAATTAA+GGG | + | chr8.3:36587998-36588017 | MS.gene71218:intron | 35.0% | |
| GAGAGAATATTTCCCATTAG+TGG | - | chr8.3:36590640-36590659 | None:intergenic | 35.0% | |
| GGAGAAAAGCAAGTAAAAAC+AGG | + | chr8.3:36589817-36589836 | MS.gene71218:intron | 35.0% | |
| TAATGATCTGCCAGTTAAGT+TGG | + | chr8.3:36589343-36589362 | MS.gene71218:CDS | 35.0% | |
| TACACTGGAATTCCTCTTAT+AGG | - | chr8.3:36587086-36587105 | None:intergenic | 35.0% | |
| TACAGATGATCAAGAAGAGT+TGG | + | chr8.3:36586845-36586864 | MS.gene71218:CDS | 35.0% | |
| TAGAGGTTTGAAGAAGAAGA+AGG | - | chr8.3:36586957-36586976 | None:intergenic | 35.0% | |
| TAGCTGATGCAGAAAACAAA+TGG | - | chr8.3:36588355-36588374 | None:intergenic | 35.0% | |
| TAGGCACGAAAATTCACAAA+AGG | + | chr8.3:36589690-36589709 | MS.gene71218:intron | 35.0% | |
| TATACATGGCTTCCACTAAT+GGG | + | chr8.3:36590625-36590644 | MS.gene71218:intron | 35.0% | |
| TGCACCAAGATTTCTAACTA+GGG | - | chr8.3:36589995-36590014 | None:intergenic | 35.0% | |
| TGCAGATAGGAAGAATTCAA+AGG | - | chr8.3:36590032-36590051 | None:intergenic | 35.0% | |
| TGGTTGAAAAGAGTTGTTGT+TGG | - | chr8.3:36587018-36587037 | None:intergenic | 35.0% | |
| TGTTGACACATTCTAAACAC+TGG | + | chr8.3:36588601-36588620 | MS.gene71218:intron | 35.0% | |
| TTGAGATGAGATACCCTAAT+TGG | + | chr8.3:36590070-36590089 | MS.gene71218:intron | 35.0% | |
| TTGCACCAAGATTTCTAACT+AGG | - | chr8.3:36589996-36590015 | None:intergenic | 35.0% | |
| TTGTAATGTAGTACAAGGAG+TGG | + | chr8.3:36587859-36587878 | MS.gene71218:intron | 35.0% | |
| ! | AGACTAAGTAGCTTTTTGCT+TGG | + | chr8.3:36587973-36587992 | MS.gene71218:intron | 35.0% |
| ! | AGTTAGAAATCTTGGTGCAA+AGG | + | chr8.3:36589996-36590015 | MS.gene71218:intron | 35.0% |
| ! | ATTCTCATTTTGCCCACTTT+AGG | + | chr8.3:36588841-36588860 | MS.gene71218:intron | 35.0% |
| ! | ATTTTCTCCCTTAATTAGGG+TGG | - | chr8.3:36588008-36588027 | None:intergenic | 35.0% |
| ! | GACTAAGTTTTCCAACTATG+GGG | - | chr8.3:36589949-36589968 | None:intergenic | 35.0% |
| ! | GTTAGAAATCTTGGTGCAAA+GGG | + | chr8.3:36589997-36590016 | MS.gene71218:intron | 35.0% |
| ! | TATCTGTAATTTTCACCGTC+CGG | - | chr8.3:36589106-36589125 | None:intergenic | 35.0% |
| ! | TCTTGAGCTAATGGATGTAA+AGG | + | chr8.3:36587596-36587615 | MS.gene71218:CDS | 35.0% |
| !! | AGGATTTTGGAAAAGAGCTT+TGG | + | chr8.3:36586875-36586894 | MS.gene71218:CDS | 35.0% |
| !! | CCCTATAAAATCGACTTGTA+AGG | - | chr8.3:36590177-36590196 | None:intergenic | 35.0% |
| !! | CTTGATGTTTGTTTGCTGTT+TGG | - | chr8.3:36586813-36586832 | None:intergenic | 35.0% |
| !! | GTTCTGATTGCGTGTTTTAA+TGG | + | chr8.3:36587793-36587812 | MS.gene71218:intron | 35.0% |
| !! | TCTGTAGTCCTTTGAAATTG+AGG | + | chr8.3:36587756-36587775 | MS.gene71218:intron | 35.0% |
| !! | TTAGGGTTTTGATGATACAC+TGG | - | chr8.3:36587101-36587120 | None:intergenic | 35.0% |
| !!! | AACAAATGGTTCTGGTTTTC+TGG | - | chr8.3:36588341-36588360 | None:intergenic | 35.0% |
| !!! | TTCTGGTTTTCTGGTAAATG+TGG | - | chr8.3:36588332-36588351 | None:intergenic | 35.0% |
| AACAATGTGTCTGTGCAGAT+AGG | - | chr8.3:36590045-36590064 | None:intergenic | 40.0% | |
| AAGACACATTTCCAACAGGA+TGG | - | chr8.3:36590713-36590732 | None:intergenic | 40.0% | |
| AATGTAGTACAAGGAGTGGT+TGG | + | chr8.3:36587863-36587882 | MS.gene71218:intron | 40.0% | |
| ACCCCATCATCATGGAATTT+GGG | - | chr8.3:36589769-36589788 | None:intergenic | 40.0% | |
| ACCCTTCTCTTTCCAATCTA+AGG | + | chr8.3:36586928-36586947 | MS.gene71218:CDS | 40.0% | |
| AGACCCCTAGTTAGAAATCT+TGG | + | chr8.3:36589988-36590007 | MS.gene71218:intron | 40.0% | |
| AGAGAAGACACATTTCCAAC+AGG | - | chr8.3:36590717-36590736 | None:intergenic | 40.0% | |
| CAAAGCTTAAGTGAAGAGCT+AGG | + | chr8.3:36587050-36587069 | MS.gene71218:CDS | 40.0% | |
| CAAATTCCACTATTGATGCG+TGG | + | chr8.3:36588682-36588701 | MS.gene71218:intron | 40.0% | |
| CACCCAAATTCCATGATGAT+GGG | + | chr8.3:36589764-36589783 | MS.gene71218:intron | 40.0% | |
| CCCTTAGATTGGAAAGAGAA+GGG | - | chr8.3:36586932-36586951 | None:intergenic | 40.0% | |
| CCCTTCTCTTTCCAATCTAA+GGG | + | chr8.3:36586929-36586948 | MS.gene71218:CDS | 40.0% | |
| GAATTTGGTTATGACTCGTG+AGG | - | chr8.3:36588879-36588898 | None:intergenic | 40.0% | |
| GATGTGATATGGATCACATG+GGG | + | chr8.3:36590507-36590526 | MS.gene71218:intron | 40.0% | |
| GCACCAAGATTTCTAACTAG+GGG | - | chr8.3:36589994-36590013 | None:intergenic | 40.0% | |
| GGGTTTCTCAAACCTATAAG+AGG | + | chr8.3:36587071-36587090 | MS.gene71218:CDS | 40.0% | |
| GGTTAGGTATGAGATTGTAG+AGG | - | chr8.3:36586974-36586993 | None:intergenic | 40.0% | |
| GTATACATGGCTTCCACTAA+TGG | + | chr8.3:36590624-36590643 | MS.gene71218:intron | 40.0% | |
| TACCCCATCATCATGGAATT+TGG | - | chr8.3:36589770-36589789 | None:intergenic | 40.0% | |
| TGACTAACCATGGTTAAAGC+TGG | - | chr8.3:36588294-36588313 | None:intergenic | 40.0% | |
| TGGAAATGTGTCTTCTCTTG+AGG | + | chr8.3:36590719-36590738 | MS.gene71218:CDS | 40.0% | |
| ! | ACCCAAATTCCATGATGATG+GGG | + | chr8.3:36589765-36589784 | MS.gene71218:intron | 40.0% |
| ! | ATTTTCTTAACCTTGGTCCG+TGG | + | chr8.3:36589463-36589482 | MS.gene71218:intron | 40.0% |
| ! | CCATGTGTTTGGTAGTAACA+GGG | + | chr8.3:36590659-36590678 | MS.gene71218:intron | 40.0% |
| ! | CTAGCTCTTCACTTAAGCTT+TGG | - | chr8.3:36587052-36587071 | None:intergenic | 40.0% |
| ! | GAAGTATTTGGCTCCATGTT+TGG | + | chr8.3:36590797-36590816 | MS.gene71218:intron | 40.0% |
| ! | GATTCTAAGGAGTCCAAACA+TGG | - | chr8.3:36590813-36590832 | None:intergenic | 40.0% |
| ! | GTTCATGCTGTTGAGCTTTT+AGG | + | chr8.3:36587299-36587318 | MS.gene71218:CDS | 40.0% |
| ! | TATCACTAACCTGATGATGC+TGG | - | chr8.3:36589134-36589153 | None:intergenic | 40.0% |
| ! | TATCGTACCAGCTTTAACCA+TGG | + | chr8.3:36588284-36588303 | MS.gene71218:intron | 40.0% |
| ! | TCATTTTGCCCACTTTAGGT+GGG | + | chr8.3:36588845-36588864 | MS.gene71218:intron | 40.0% |
| ! | TCCATGTGTTTGGTAGTAAC+AGG | + | chr8.3:36590658-36590677 | MS.gene71218:intron | 40.0% |
| ! | TTTTCTTAACCTTGGTCCGT+GGG | + | chr8.3:36589464-36589483 | MS.gene71218:intron | 40.0% |
| !! | GCAAACAAACATCAAGTTGG+AGG | + | chr8.3:36586817-36586836 | MS.gene71218:CDS | 40.0% |
| !! | TACAAGGAGTGGTTGGTTTA+TGG | + | chr8.3:36587870-36587889 | MS.gene71218:intron | 40.0% |
| !!! | ATTTGGGTGCTCTTGTTTTG+AGG | - | chr8.3:36589753-36589772 | None:intergenic | 40.0% |
| AGAAGAAGGAGCCCTTAGAT+TGG | - | chr8.3:36586943-36586962 | None:intergenic | 45.0% | |
| ATTACATGGAGCCCCATAGT+TGG | + | chr8.3:36589935-36589954 | MS.gene71218:intron | 45.0% | |
| CAAGATCCACGCATCAATAG+TGG | - | chr8.3:36588691-36588710 | None:intergenic | 45.0% | |
| CACTATTGATGCGTGGATCT+TGG | + | chr8.3:36588689-36588708 | MS.gene71218:intron | 45.0% | |
| CCCTGTTACTACCAAACACA+TGG | - | chr8.3:36590662-36590681 | None:intergenic | 45.0% | |
| GCACCCAAATTCCATGATGA+TGG | + | chr8.3:36589763-36589782 | MS.gene71218:intron | 45.0% | |
| GCCCTTAGATTGGAAAGAGA+AGG | - | chr8.3:36586933-36586952 | None:intergenic | 45.0% | |
| GGAGGCTTTGCTTCCAATTA+GGG | - | chr8.3:36590086-36590105 | None:intergenic | 45.0% | |
| TCGCGATTTCGACAAACTCA+TGG | - | chr8.3:36587377-36587396 | None:intergenic | 45.0% | |
| TGAGATCAAAGTTGTTGCCG+CGG | + | chr8.3:36587210-36587229 | MS.gene71218:CDS | 45.0% | |
| TGGAGGCTTTGCTTCCAATT+AGG | - | chr8.3:36590087-36590106 | None:intergenic | 45.0% | |
| TTGGTTGCATGGTAAGCCAA+AGG | + | chr8.3:36590686-36590705 | MS.gene71218:CDS | 45.0% | |
| TTTCCAACAGGATGGACCTT+TGG | - | chr8.3:36590705-36590724 | None:intergenic | 45.0% | |
| TTTCTTAACCTTGGTCCGTG+GGG | + | chr8.3:36589465-36589484 | MS.gene71218:intron | 45.0% | |
| ! | CATGCTGTTGAGCTTTTAGG+TGG | + | chr8.3:36587302-36587321 | MS.gene71218:CDS | 45.0% |
| ! | CTCATTTTGCCCACTTTAGG+TGG | + | chr8.3:36588844-36588863 | MS.gene71218:intron | 45.0% |
| ! | GAAGCATCAAAGAGTGGTTG+TGG | - | chr8.3:36587149-36587168 | None:intergenic | 45.0% |
| ! | GCATTTGGAGCAAATCTTCC+AGG | + | chr8.3:36589402-36589421 | MS.gene71218:CDS | 45.0% |
| ! | TTGGTAGTAACAGGGAAGCT+TGG | + | chr8.3:36590667-36590686 | MS.gene71218:intron | 45.0% |
| !! | GAAGCAGAAGCATCAAAGAG+TGG | - | chr8.3:36587155-36587174 | None:intergenic | 45.0% |
| !!! | TATTTTTAAAATAGATAATA+GGG | - | chr8.3:36589862-36589881 | None:intergenic | 5.0% |
| AAACTCCCCAGTCATGACAG+AGG | - | chr8.3:36588261-36588280 | None:intergenic | 50.0% | |
| AAAGAAATCCCCACGGACCA+AGG | - | chr8.3:36589476-36589495 | None:intergenic | 50.0% | |
| AACAGGGAAGCTTGGTTGCA+TGG | + | chr8.3:36590675-36590694 | MS.gene71218:intron | 50.0% | |
| AAGCCAAAGGTCCATCCTGT+TGG | + | chr8.3:36590699-36590718 | MS.gene71218:CDS | 50.0% | |
| ATCCTCTCCTCTGTCATGAC+TGG | + | chr8.3:36588251-36588270 | MS.gene71218:intron | 50.0% | |
| GATAGACCACCAGCATCATC+AGG | + | chr8.3:36589122-36589141 | MS.gene71218:CDS | 50.0% | |
| GTGATATGGATCACATGGGG+TGG | + | chr8.3:36590510-36590529 | MS.gene71218:intron | 50.0% | |
| TATCGGCAGTGTGTCTGATG+TGG | - | chr8.3:36588523-36588542 | None:intergenic | 50.0% | |
| TCCTCTCCTCTGTCATGACT+GGG | + | chr8.3:36588252-36588271 | MS.gene71218:intron | 50.0% | |
| TGATGCGTGGATCTTGGTAG+CGG | + | chr8.3:36588695-36588714 | MS.gene71218:intron | 50.0% | |
| ! | CACTAACCTGATGATGCTGG+TGG | - | chr8.3:36589131-36589150 | None:intergenic | 50.0% |
| ! | TTTTGCCCACTTTAGGTGGG+AGG | + | chr8.3:36588848-36588867 | MS.gene71218:intron | 50.0% |
| CCTCTCCTCTGTCATGACTG+GGG | + | chr8.3:36588253-36588272 | MS.gene71218:intron | 55.0% | |
| GTGGTAGTCCAACGCATCCT+CGG | - | chr8.3:36587263-36587282 | None:intergenic | 55.0% | |
| GTTCGCCTCCCACCTAAAGT+GGG | - | chr8.3:36588856-36588875 | None:intergenic | 55.0% | |
| !! | CTGCGCTTTGAAGGAAACCG+CGG | - | chr8.3:36587230-36587249 | None:intergenic | 55.0% |
| CCCCAGTCATGACAGAGGAG+AGG | - | chr8.3:36588256-36588275 | None:intergenic | 60.0% | |
| GCTCTCACGCTGCGCTTTGA+AGG | - | chr8.3:36587239-36587258 | None:intergenic | 60.0% | |
| GGTTCGCCTCCCACCTAAAG+TGG | - | chr8.3:36588857-36588876 | None:intergenic | 60.0% | |
| TGAGAGCTCCGAGGATGCGT+TGG | + | chr8.3:36587252-36587271 | MS.gene71218:CDS | 60.0% | |
| AGCGCAGCGTGAGAGCTCCG+AGG | + | chr8.3:36587243-36587262 | MS.gene71218:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 36586762 | 36590845 | 36586762 | ID=MS.gene71218 |
| chr8.3 | mRNA | 36586762 | 36590845 | 36586762 | ID=MS.gene71218.t1;Parent=MS.gene71218 |
| chr8.3 | exon | 36586762 | 36587332 | 36586762 | ID=MS.gene71218.t1.exon1;Parent=MS.gene71218.t1 |
| chr8.3 | CDS | 36586762 | 36587332 | 36586762 | ID=cds.MS.gene71218.t1;Parent=MS.gene71218.t1 |
| chr8.3 | exon | 36587577 | 36587659 | 36587577 | ID=MS.gene71218.t1.exon2;Parent=MS.gene71218.t1 |
| chr8.3 | CDS | 36587577 | 36587659 | 36587577 | ID=cds.MS.gene71218.t1;Parent=MS.gene71218.t1 |
| chr8.3 | exon | 36589098 | 36589143 | 36589098 | ID=MS.gene71218.t1.exon3;Parent=MS.gene71218.t1 |
| chr8.3 | CDS | 36589098 | 36589143 | 36589098 | ID=cds.MS.gene71218.t1;Parent=MS.gene71218.t1 |
| chr8.3 | exon | 36589261 | 36589423 | 36589261 | ID=MS.gene71218.t1.exon4;Parent=MS.gene71218.t1 |
| chr8.3 | CDS | 36589261 | 36589423 | 36589261 | ID=cds.MS.gene71218.t1;Parent=MS.gene71218.t1 |
| chr8.3 | exon | 36590680 | 36590740 | 36590680 | ID=MS.gene71218.t1.exon5;Parent=MS.gene71218.t1 |
| chr8.3 | CDS | 36590680 | 36590740 | 36590680 | ID=cds.MS.gene71218.t1;Parent=MS.gene71218.t1 |
| chr8.3 | exon | 36590801 | 36590845 | 36590801 | ID=MS.gene71218.t1.exon6;Parent=MS.gene71218.t1 |
| chr8.3 | CDS | 36590801 | 36590845 | 36590801 | ID=cds.MS.gene71218.t1;Parent=MS.gene71218.t1 |
| Gene Sequence |
| Protein sequence |
