Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71832.t1 | XP_013470179.1 | 95.7 | 231 | 10 | 0 | 1 | 231 | 1 | 231 | 9.30E-123 | 449.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71832.t1 | Q9CA30 | 55.1 | 147 | 54 | 3 | 1 | 145 | 1 | 137 | 2.6e-41 | 170.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71832.t1 | G7ZZB8 | 95.7 | 231 | 10 | 0 | 1 | 231 | 1 | 231 | 6.7e-123 | 449.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene71832.t1 | TF | LOB |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71832.t1 | MTR_1g110840 | 95.671 | 231 | 10 | 0 | 1 | 231 | 1 | 231 | 4.43e-167 | 460 |
| MS.gene71832.t1 | MTR_6g453130 | 93.939 | 231 | 14 | 0 | 1 | 231 | 1 | 231 | 1.77e-164 | 453 |
| MS.gene71832.t1 | MTR_6g054080 | 90.476 | 231 | 22 | 0 | 1 | 231 | 1 | 231 | 2.35e-158 | 438 |
| MS.gene71832.t1 | MTR_6g054150 | 88.745 | 231 | 26 | 0 | 1 | 231 | 1 | 231 | 2.96e-156 | 432 |
| MS.gene71832.t1 | MTR_6g018270 | 55.172 | 174 | 57 | 7 | 1 | 168 | 1 | 159 | 6.24e-62 | 195 |
| MS.gene71832.t1 | MTR_7g007010 | 44.053 | 227 | 109 | 7 | 1 | 223 | 1 | 213 | 1.07e-55 | 180 |
| MS.gene71832.t1 | MTR_4g095600 | 56.303 | 119 | 48 | 2 | 3 | 119 | 1 | 117 | 2.10e-46 | 154 |
| MS.gene71832.t1 | MTR_5g015880 | 44.970 | 169 | 82 | 5 | 3 | 165 | 1 | 164 | 7.00e-45 | 150 |
| MS.gene71832.t1 | MTR_1g106420 | 44.882 | 127 | 63 | 2 | 3 | 124 | 1 | 125 | 1.02e-35 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71832.t1 | AT3G02550 | 40.529 | 227 | 122 | 5 | 1 | 225 | 1 | 216 | 2.70e-53 | 172 |
| MS.gene71832.t1 | AT1G68510 | 55.102 | 147 | 54 | 3 | 1 | 145 | 1 | 137 | 2.97e-53 | 171 |
| MS.gene71832.t1 | AT1G67100 | 54.861 | 144 | 57 | 3 | 1 | 144 | 1 | 136 | 5.76e-50 | 163 |
| MS.gene71832.t1 | AT3G49940 | 53.659 | 123 | 55 | 1 | 3 | 125 | 1 | 121 | 1.37e-45 | 152 |
| MS.gene71832.t1 | AT5G67420 | 55.963 | 109 | 46 | 1 | 3 | 111 | 1 | 107 | 1.10e-43 | 147 |
| MS.gene71832.t1 | AT5G67420 | 55.963 | 109 | 46 | 1 | 3 | 111 | 1 | 107 | 1.10e-43 | 147 |
| MS.gene71832.t1 | AT4G37540 | 57.798 | 109 | 44 | 1 | 3 | 111 | 1 | 107 | 1.46e-43 | 147 |
Find 62 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGGCATGCCCTTGGGATTC+AGG | 0.157225 | 1.3:-75557827 | None:intergenic |
| ATGGGGCGCTTGGCTTATTT+TGG | 0.165756 | 1.3:+75558303 | MS.gene71832:CDS |
| AAGAATACCAACATGGAAAT+TGG | 0.166066 | 1.3:+75558602 | MS.gene71832:CDS |
| ACCGGTTCGGCCATAAAATT+TGG | 0.172606 | 1.3:-75557861 | None:intergenic |
| ATGGCGTATATCATAGGTTT+TGG | 0.254539 | 1.3:-75558456 | None:intergenic |
| TGCTGAGAATCAAGTGAATT+TGG | 0.279066 | 1.3:+75558667 | MS.gene71832:CDS |
| CCATGTTGGTATTCTTCAAA+AGG | 0.367139 | 1.3:-75558595 | None:intergenic |
| AGAATACCAACATGGAAATT+GGG | 0.374565 | 1.3:+75558603 | MS.gene71832:CDS |
| TGCCACATGGCGTATATCAT+AGG | 0.386203 | 1.3:-75558462 | None:intergenic |
| CTTTGATTGCCAATCAACTA+AGG | 0.392207 | 1.3:+75558703 | MS.gene71832:CDS |
| CATAAAATTTGGCAAGGAAG+AGG | 0.404166 | 1.3:-75557850 | None:intergenic |
| GACTGAACCAACTCGTGGCT+TGG | 0.415502 | 1.3:-75558549 | None:intergenic |
| ACTGAACCAACTCGTGGCTT+GGG | 0.424285 | 1.3:-75558548 | None:intergenic |
| GTGAATTTGGAACTCACTCT+TGG | 0.424885 | 1.3:+75558680 | MS.gene71832:CDS |
| GGAAGAGGGTGGCATGCCCT+TGG | 0.443110 | 1.3:-75557835 | None:intergenic |
| GCAACTGATCCACTCAAGGC+AGG | 0.443950 | 1.3:-75557804 | None:intergenic |
| TGGCATGCCCTTGGGATTCA+GGG | 0.444879 | 1.3:-75557826 | None:intergenic |
| AAAACTCAATTCAAAAGAGC+TGG | 0.446487 | 1.3:+75558512 | MS.gene71832:CDS |
| ATTGATGGGCAGACATCATC+AGG | 0.455052 | 1.3:+75558404 | MS.gene71832:CDS |
| GCAGTTGAAGCTGTGCTGAC+TGG | 0.456964 | 1.3:+75558353 | MS.gene71832:CDS |
| AGATTGGTGAATCCCACATA+TGG | 0.458590 | 1.3:+75558284 | MS.gene71832:CDS |
| TAAGCCAAGCGCCCCATATG+TGG | 0.471835 | 1.3:-75558297 | None:intergenic |
| CATGTTGGTATTCTTCAAAA+GGG | 0.477135 | 1.3:-75558594 | None:intergenic |
| GAAGAGGGTGGCATGCCCTT+GGG | 0.479104 | 1.3:-75557834 | None:intergenic |
| GGAGATTGAGCAAACCGGTT+CGG | 0.494518 | 1.3:-75557874 | None:intergenic |
| AATCATCACTACAACCTTTG+CGG | 0.504650 | 1.3:-75557769 | None:intergenic |
| GATTGGTGAATCCCACATAT+GGG | 0.508471 | 1.3:+75558285 | MS.gene71832:CDS |
| GATATACGCCATGTGGCAAA+AGG | 0.516720 | 1.3:+75558467 | MS.gene71832:CDS |
| AATCCCACATATGGGGCGCT+TGG | 0.518707 | 1.3:+75558293 | MS.gene71832:CDS |
| GGTGAGGAGATTGAGCAAAC+CGG | 0.524508 | 1.3:-75557879 | None:intergenic |
| TCATCAAGCCCTGCCTTGAG+TGG | 0.538225 | 1.3:+75557795 | MS.gene71832:CDS |
| GTACCAATGTGGACATCAAA+GGG | 0.546635 | 1.3:+75558489 | MS.gene71832:CDS |
| TTTCCCTTTGATGTCCACAT+TGG | 0.551024 | 1.3:-75558492 | None:intergenic |
| GGTACCAATGTGGACATCAA+AGG | 0.551224 | 1.3:+75558488 | MS.gene71832:CDS |
| GTACGAGGCAGCTGGTAGAT+TGG | 0.560594 | 1.3:+75558268 | MS.gene71832:CDS |
| GAATACCAACATGGAAATTG+GGG | 0.561319 | 1.3:+75558604 | MS.gene71832:CDS |
| CTGAAGCCCAAGCCACGAGT+TGG | 0.576033 | 1.3:+75558542 | MS.gene71832:CDS |
| AGTCTCCCCAATTTCCATGT+TGG | 0.576332 | 1.3:-75558609 | None:intergenic |
| ATAAAATTTGGCAAGGAAGA+GGG | 0.578936 | 1.3:-75557849 | None:intergenic |
| TTCGGCCATAAAATTTGGCA+AGG | 0.579687 | 1.3:-75557856 | None:intergenic |
| TAATGAAGTTGAGTTGCAAT+GGG | 0.583194 | 1.3:+75557735 | None:intergenic |
| TTTGATTGCCAATCAACTAA+GGG | 0.586746 | 1.3:+75558704 | MS.gene71832:CDS |
| AAGCCAAGCGCCCCATATGT+GGG | 0.589682 | 1.3:-75558296 | None:intergenic |
| AAACTCAATTCAAAAGAGCT+GGG | 0.590181 | 1.3:+75558513 | MS.gene71832:CDS |
| CAACTGATCCACTCAAGGCA+GGG | 0.595554 | 1.3:-75557803 | None:intergenic |
| ATCAGTTGCCCTGAATCCCA+AGG | 0.599742 | 1.3:+75557818 | MS.gene71832:CDS |
| ATAATGAAGTTGAGTTGCAA+TGG | 0.608858 | 1.3:+75557734 | None:intergenic |
| TCATTGTTGTACGAGGCAGC+TGG | 0.614180 | 1.3:+75558260 | MS.gene71832:CDS |
| ACGAGTTGGTTCAGTCGACT+CGG | 0.622355 | 1.3:+75558556 | MS.gene71832:CDS |
| CAGGGCAACTGATCCACTCA+AGG | 0.625744 | 1.3:-75557808 | None:intergenic |
| GGGTGTCGTGTGCTCCGCAA+AGG | 0.627575 | 1.3:+75557755 | MS.gene71832:CDS |
| ATTGGTGAATCCCACATATG+GGG | 0.640018 | 1.3:+75558286 | MS.gene71832:CDS |
| TTTGATTGGTAGCATTGGTG+AGG | 0.643249 | 1.3:-75557895 | None:intergenic |
| AAATTGGGGAGACTTCATCA+AGG | 0.644743 | 1.3:+75558618 | MS.gene71832:CDS |
| AATTGGGGAGACTTCATCAA+GGG | 0.644822 | 1.3:+75558619 | MS.gene71832:CDS |
| AATCAAAATCATAATCCACC+AGG | 0.664735 | 1.3:+75557911 | MS.gene71832:CDS |
| TCAGTTGCCCTGAATCCCAA+GGG | 0.669183 | 1.3:+75557819 | MS.gene71832:CDS |
| GAGTCGACTGAACCAACTCG+TGG | 0.679210 | 1.3:-75558554 | None:intergenic |
| AACCTATGATATACGCCATG+TGG | 0.679816 | 1.3:+75558460 | MS.gene71832:CDS |
| AAATTTGGCAAGGAAGAGGG+TGG | 0.680062 | 1.3:-75557846 | None:intergenic |
| GTTTAAATCATTGTTGTACG+AGG | 0.684324 | 1.3:+75558253 | MS.gene71832:CDS |
| TGTGGCAAAAGGTACCAATG+TGG | 0.731996 | 1.3:+75558478 | MS.gene71832:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTTAATTCATGAATATTGA+TGG | + | chr1.3:75557965-75557984 | MS.gene71832:intron | 20.0% |
| !!! | GAATCTATGAAAAGATTTTA+TGG | - | chr1.3:75558161-75558180 | None:intergenic | 20.0% |
| ! | AATTCATGAATATTGATGGA+TGG | + | chr1.3:75557969-75557988 | MS.gene71832:intron | 25.0% |
| !! | ACAGTTTTACAATGATTGAT+GGG | + | chr1.3:75558390-75558409 | MS.gene71832:CDS | 25.0% |
| !! | GTTTAATTTATGATCCGTAA+CGG | - | chr1.3:75558119-75558138 | None:intergenic | 25.0% |
| AAAACTCAATTCAAAAGAGC+TGG | + | chr1.3:75558512-75558531 | MS.gene71832:CDS | 30.0% | |
| AAACTCAATTCAAAAGAGCT+GGG | + | chr1.3:75558513-75558532 | MS.gene71832:CDS | 30.0% | |
| AAGAATACCAACATGGAAAT+TGG | + | chr1.3:75558602-75558621 | MS.gene71832:CDS | 30.0% | |
| AATCAAAATCATAATCCACC+AGG | + | chr1.3:75557911-75557930 | MS.gene71832:CDS | 30.0% | |
| AGAATACCAACATGGAAATT+GGG | + | chr1.3:75558603-75558622 | MS.gene71832:CDS | 30.0% | |
| ATAAAATTTGGCAAGGAAGA+GGG | - | chr1.3:75557852-75557871 | None:intergenic | 30.0% | |
| CATGTTGGTATTCTTCAAAA+GGG | - | chr1.3:75558597-75558616 | None:intergenic | 30.0% | |
| GTTTAAATCATTGTTGTACG+AGG | + | chr1.3:75558253-75558272 | MS.gene71832:CDS | 30.0% | |
| TAAAAAAGTTTGTCGTGTAG+CGG | - | chr1.3:75558051-75558070 | None:intergenic | 30.0% | |
| TGGAACATAAATGAGACATT+AGG | - | chr1.3:75558141-75558160 | None:intergenic | 30.0% | |
| TTTGATTGCCAATCAACTAA+GGG | + | chr1.3:75558704-75558723 | MS.gene71832:CDS | 30.0% | |
| ! | ACCACAATTTAAAACCATGA+TGG | - | chr1.3:75558017-75558036 | None:intergenic | 30.0% |
| ! | CAATTTAAAACCATGATGGA+TGG | - | chr1.3:75558013-75558032 | None:intergenic | 30.0% |
| ! | GACAGTTTTACAATGATTGA+TGG | + | chr1.3:75558389-75558408 | MS.gene71832:CDS | 30.0% |
| !!! | ATGATTTTGATTGGTAGCAT+TGG | - | chr1.3:75557903-75557922 | None:intergenic | 30.0% |
| !!! | TCCATCATGGTTTTAAATTG+TGG | + | chr1.3:75558013-75558032 | MS.gene71832:intron | 30.0% |
| !!! | TGGTGGATTATGATTTTGAT+TGG | - | chr1.3:75557912-75557931 | None:intergenic | 30.0% |
| AATCATCACTACAACCTTTG+CGG | - | chr1.3:75557772-75557791 | None:intergenic | 35.0% | |
| ATCAATGATTCCATCCATCA+TGG | + | chr1.3:75558000-75558019 | MS.gene71832:intron | 35.0% | |
| CATAAAATTTGGCAAGGAAG+AGG | - | chr1.3:75557853-75557872 | None:intergenic | 35.0% | |
| CCATGTTGGTATTCTTCAAA+AGG | - | chr1.3:75558598-75558617 | None:intergenic | 35.0% | |
| CTTTGATTGCCAATCAACTA+AGG | + | chr1.3:75558703-75558722 | MS.gene71832:CDS | 35.0% | |
| GAATACCAACATGGAAATTG+GGG | + | chr1.3:75558604-75558623 | MS.gene71832:CDS | 35.0% | |
| TGCTGAGAATCAAGTGAATT+TGG | + | chr1.3:75558667-75558686 | MS.gene71832:CDS | 35.0% | |
| ! | ATGGCGTATATCATAGGTTT+TGG | - | chr1.3:75558459-75558478 | None:intergenic | 35.0% |
| ! | CTCTTCCTTGCCAAATTTTA+TGG | + | chr1.3:75557851-75557870 | MS.gene71832:CDS | 35.0% |
| ! | TGGCGTATATCATAGGTTTT+GGG | - | chr1.3:75558458-75558477 | None:intergenic | 35.0% |
| ! | TTTTCTTGCCCTTAGTTGAT+TGG | - | chr1.3:75558715-75558734 | None:intergenic | 35.0% |
| !! | CCTTTTGAAGAATACCAACA+TGG | + | chr1.3:75558595-75558614 | MS.gene71832:CDS | 35.0% |
| AAATTGGGGAGACTTCATCA+AGG | + | chr1.3:75558618-75558637 | MS.gene71832:CDS | 40.0% | |
| AACCTATGATATACGCCATG+TGG | + | chr1.3:75558460-75558479 | MS.gene71832:CDS | 40.0% | |
| AATTGGGGAGACTTCATCAA+GGG | + | chr1.3:75558619-75558638 | MS.gene71832:CDS | 40.0% | |
| AGATTGGTGAATCCCACATA+TGG | + | chr1.3:75558284-75558303 | MS.gene71832:CDS | 40.0% | |
| ATTGGTGAATCCCACATATG+GGG | + | chr1.3:75558286-75558305 | MS.gene71832:CDS | 40.0% | |
| GATTGGTGAATCCCACATAT+GGG | + | chr1.3:75558285-75558304 | MS.gene71832:CDS | 40.0% | |
| GTACCAATGTGGACATCAAA+GGG | + | chr1.3:75558489-75558508 | MS.gene71832:CDS | 40.0% | |
| TATGATCCGTAACGGTATTG+CGG | - | chr1.3:75558111-75558130 | None:intergenic | 40.0% | |
| TTCGGCCATAAAATTTGGCA+AGG | - | chr1.3:75557859-75557878 | None:intergenic | 40.0% | |
| TTTCCCTTTGATGTCCACAT+TGG | - | chr1.3:75558495-75558514 | None:intergenic | 40.0% | |
| ! | GGCGTATATCATAGGTTTTG+GGG | - | chr1.3:75558457-75558476 | None:intergenic | 40.0% |
| ! | GTGAATTTGGAACTCACTCT+TGG | + | chr1.3:75558680-75558699 | MS.gene71832:CDS | 40.0% |
| !! | GTGACCAACTTAAGTTGATG+CGG | + | chr1.3:75558085-75558104 | MS.gene71832:intron | 40.0% |
| !! | TTTGATTGGTAGCATTGGTG+AGG | - | chr1.3:75557898-75557917 | None:intergenic | 40.0% |
| !!! | GCTTATTTTGGACAGCGAAT+TGG | + | chr1.3:75558315-75558334 | MS.gene71832:CDS | 40.0% |
| AAATTTGGCAAGGAAGAGGG+TGG | - | chr1.3:75557849-75557868 | None:intergenic | 45.0% | |
| AGTCTCCCCAATTTCCATGT+TGG | - | chr1.3:75558612-75558631 | None:intergenic | 45.0% | |
| AGTGAACATAGCTAGCTACC+TGG | - | chr1.3:75557932-75557951 | None:intergenic | 45.0% | |
| GATATACGCCATGTGGCAAA+AGG | + | chr1.3:75558467-75558486 | MS.gene71832:CDS | 45.0% | |
| GGTACCAATGTGGACATCAA+AGG | + | chr1.3:75558488-75558507 | MS.gene71832:CDS | 45.0% | |
| TGCCACATGGCGTATATCAT+AGG | - | chr1.3:75558465-75558484 | None:intergenic | 45.0% | |
| ! | ATTGATGGGCAGACATCATC+AGG | + | chr1.3:75558404-75558423 | MS.gene71832:CDS | 45.0% |
| ! | CATTGGTACCTTTTGCCACA+TGG | - | chr1.3:75558478-75558497 | None:intergenic | 45.0% |
| ! | GCCAAATTTTATGGCCGAAC+CGG | + | chr1.3:75557860-75557879 | MS.gene71832:CDS | 45.0% |
| !! | ACCGGTTCGGCCATAAAATT+TGG | - | chr1.3:75557864-75557883 | None:intergenic | 45.0% |
| !! | TGTGGCAAAAGGTACCAATG+TGG | + | chr1.3:75558478-75558497 | MS.gene71832:CDS | 45.0% |
| ACTGAACCAACTCGTGGCTT+GGG | - | chr1.3:75558551-75558570 | None:intergenic | 50.0% | |
| ATCAGTTGCCCTGAATCCCA+AGG | + | chr1.3:75557818-75557837 | MS.gene71832:CDS | 50.0% | |
| CAACTGATCCACTCAAGGCA+GGG | - | chr1.3:75557806-75557825 | None:intergenic | 50.0% | |
| GAACATAGCTAGCTACCTGG+TGG | - | chr1.3:75557929-75557948 | None:intergenic | 50.0% | |
| GGAGATTGAGCAAACCGGTT+CGG | - | chr1.3:75557877-75557896 | None:intergenic | 50.0% | |
| GGTGAGGAGATTGAGCAAAC+CGG | - | chr1.3:75557882-75557901 | None:intergenic | 50.0% | |
| TCAGTTGCCCTGAATCCCAA+GGG | + | chr1.3:75557819-75557838 | MS.gene71832:CDS | 50.0% | |
| TCATTGTTGTACGAGGCAGC+TGG | + | chr1.3:75558260-75558279 | MS.gene71832:CDS | 50.0% | |
| !! | ACGAGTTGGTTCAGTCGACT+CGG | + | chr1.3:75558556-75558575 | MS.gene71832:CDS | 50.0% |
| !! | ATGGGGCGCTTGGCTTATTT+TGG | + | chr1.3:75558303-75558322 | MS.gene71832:CDS | 50.0% |
| AAGCCAAGCGCCCCATATGT+GGG | - | chr1.3:75558299-75558318 | None:intergenic | 55.0% | |
| ATGCGGCCGCAATACCGTTA+CGG | + | chr1.3:75558102-75558121 | MS.gene71832:intron | 55.0% | |
| CAGGGCAACTGATCCACTCA+AGG | - | chr1.3:75557811-75557830 | None:intergenic | 55.0% | |
| GACTGAACCAACTCGTGGCT+TGG | - | chr1.3:75558552-75558571 | None:intergenic | 55.0% | |
| GAGTCGACTGAACCAACTCG+TGG | - | chr1.3:75558557-75558576 | None:intergenic | 55.0% | |
| GCAACTGATCCACTCAAGGC+AGG | - | chr1.3:75557807-75557826 | None:intergenic | 55.0% | |
| GCGGCCGCATCAACTTAAGT+TGG | - | chr1.3:75558092-75558111 | None:intergenic | 55.0% | |
| GTACGAGGCAGCTGGTAGAT+TGG | + | chr1.3:75558268-75558287 | MS.gene71832:CDS | 55.0% | |
| TAAGCCAAGCGCCCCATATG+TGG | - | chr1.3:75558300-75558319 | None:intergenic | 55.0% | |
| TCATCAAGCCCTGCCTTGAG+TGG | + | chr1.3:75557795-75557814 | MS.gene71832:CDS | 55.0% | |
| TGGCATGCCCTTGGGATTCA+GGG | - | chr1.3:75557829-75557848 | None:intergenic | 55.0% | |
| ! | AATCCCACATATGGGGCGCT+TGG | + | chr1.3:75558293-75558312 | MS.gene71832:CDS | 55.0% |
| ! | GCAGTTGAAGCTGTGCTGAC+TGG | + | chr1.3:75558353-75558372 | MS.gene71832:CDS | 55.0% |
| CTGAAGCCCAAGCCACGAGT+TGG | + | chr1.3:75558542-75558561 | MS.gene71832:CDS | 60.0% | |
| GAAGAGGGTGGCATGCCCTT+GGG | - | chr1.3:75557837-75557856 | None:intergenic | 60.0% | |
| GTGGCATGCCCTTGGGATTC+AGG | - | chr1.3:75557830-75557849 | None:intergenic | 60.0% | |
| GGAAGAGGGTGGCATGCCCT+TGG | - | chr1.3:75557838-75557857 | None:intergenic | 65.0% | |
| ! | GGGTGTCGTGTGCTCCGCAA+AGG | + | chr1.3:75557755-75557774 | MS.gene71832:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 75557737 | 75558748 | 75557737 | ID=MS.gene71832 |
| chr1.3 | mRNA | 75557737 | 75558748 | 75557737 | ID=MS.gene71832.t1;Parent=MS.gene71832 |
| chr1.3 | exon | 75557737 | 75557932 | 75557737 | ID=MS.gene71832.t1.exon1;Parent=MS.gene71832.t1 |
| chr1.3 | CDS | 75557737 | 75557932 | 75557737 | ID=cds.MS.gene71832.t1;Parent=MS.gene71832.t1 |
| chr1.3 | exon | 75558249 | 75558748 | 75558249 | ID=MS.gene71832.t1.exon2;Parent=MS.gene71832.t1 |
| chr1.3 | CDS | 75558249 | 75558748 | 75558249 | ID=cds.MS.gene71832.t1;Parent=MS.gene71832.t1 |
| Gene Sequence |
| Protein sequence |
