AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene71964

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71964.t1 MTR_4g100720 83.957 187 15 1 1 187 1 172 5.50e-111 314
MS.gene71964.t1 MTR_4g125520 66.942 121 40 0 9 129 8 128 6.88e-55 177
MS.gene71964.t1 MTR_5g079670 66.372 113 38 0 4 116 2 114 2.15e-51 165
MS.gene71964.t1 MTR_7g117730 64.912 114 40 0 9 122 8 121 3.78e-51 166
MS.gene71964.t1 MTR_8g027345 59.843 127 51 0 9 135 8 134 4.96e-51 166
MS.gene71964.t1 MTR_8g020490 71.154 104 30 0 13 116 8 111 1.32e-50 164
MS.gene71964.t1 MTR_0197s0010 61.157 121 47 0 13 133 1 121 1.64e-49 160
MS.gene71964.t1 MTR_3g083540 65.741 108 37 0 9 116 37 144 6.72e-49 161
MS.gene71964.t1 MTR_3g097450 58.462 130 48 1 10 133 9 138 1.22e-48 160
MS.gene71964.t1 MTR_4g073420 51.408 142 69 0 10 151 9 150 1.82e-48 159
MS.gene71964.t1 MTR_4g485530 66.990 103 34 0 14 116 13 115 1.76e-46 151
MS.gene71964.t1 MTR_2g011660 62.069 116 44 0 13 128 13 128 1.86e-46 156
MS.gene71964.t1 MTR_4g091490 63.158 114 42 0 13 126 13 126 2.05e-46 156
MS.gene71964.t1 MTR_0251s0050 61.818 110 42 0 10 119 10 119 6.30e-46 152
MS.gene71964.t1 MTR_7g115650 46.309 149 68 1 13 149 12 160 1.77e-45 149
MS.gene71964.t1 MTR_0008s0390 59.016 122 49 1 10 130 10 131 3.11e-45 150
MS.gene71964.t1 MTR_3g074520 60.526 114 45 0 13 126 12 125 6.70e-45 152
MS.gene71964.t1 MTR_1g100653 62.037 108 41 0 10 117 9 116 9.60e-45 150
MS.gene71964.t1 MTR_5g079290 64.423 104 37 0 13 116 17 120 9.91e-45 149
MS.gene71964.t1 MTR_5g029840 62.500 112 42 0 15 126 14 125 1.24e-44 151
MS.gene71964.t1 MTR_8g060940 67.327 101 33 0 13 113 7 107 1.53e-44 148
MS.gene71964.t1 MTR_5g078910 62.264 106 40 0 12 117 6 111 2.49e-44 149
MS.gene71964.t1 MTR_4g121460 63.462 104 38 0 13 116 12 115 3.03e-44 150
MS.gene71964.t1 MTR_7g011170 54.015 137 62 1 13 148 12 148 4.27e-44 149
MS.gene71964.t1 MTR_2g089620 58.824 119 49 0 10 128 9 127 7.28e-44 149
MS.gene71964.t1 MTR_0063s0090 49.655 145 60 3 10 141 9 153 7.99e-44 145
MS.gene71964.t1 MTR_3g461490 56.410 117 51 0 10 126 9 125 1.09e-43 148
MS.gene71964.t1 MTR_0001s0360 63.810 105 38 0 13 117 7 111 1.24e-43 146
MS.gene71964.t1 MTR_1g076150 61.682 107 41 0 10 116 9 115 1.46e-43 146
MS.gene71964.t1 MTR_4g478180 59.649 114 46 0 13 126 13 126 1.59e-43 149
MS.gene71964.t1 MTR_1g043050 51.163 129 63 0 10 138 9 137 1.64e-43 146
MS.gene71964.t1 MTR_1g085040 48.052 154 77 1 10 163 9 159 1.70e-43 149
MS.gene71964.t1 MTR_5g079220 63.462 104 38 0 13 116 21 124 2.18e-43 146
MS.gene71964.t1 MTR_0008s0280 51.128 133 60 1 10 137 9 141 2.23e-43 145
MS.gene71964.t1 MTR_5g007370 58.772 114 47 0 13 126 12 125 3.19e-43 146
MS.gene71964.t1 MTR_7g017260 55.814 129 54 2 13 139 25 152 4.71e-43 145
MS.gene71964.t1 MTR_5g079120 54.962 131 58 1 10 139 58 188 5.80e-43 146
MS.gene71964.t1 MTR_0008s0470 56.303 119 51 1 13 130 13 131 6.89e-43 145
MS.gene71964.t1 MTR_1g112760 57.759 116 49 0 1 116 1 116 8.48e-43 143
MS.gene71964.t1 MTR_3g077110 58.407 113 47 0 4 116 3 115 8.72e-43 146
MS.gene71964.t1 MTR_4g082290 52.482 141 63 1 10 150 9 145 2.03e-42 147
MS.gene71964.t1 MTR_8g095390 52.419 124 59 0 10 133 9 132 2.10e-42 145
MS.gene71964.t1 MTR_0247s0040 64.356 101 36 0 13 113 7 107 2.50e-42 140
MS.gene71964.t1 MTR_2g097910 52.800 125 59 0 13 137 20 144 3.64e-42 144
MS.gene71964.t1 MTR_1g043080 57.944 107 45 0 10 116 9 115 4.24e-42 142
MS.gene71964.t1 MTR_2g034790 52.206 136 58 2 10 138 9 144 6.12e-42 144
MS.gene71964.t1 MTR_4g105130 60.748 107 42 0 10 116 9 115 1.10e-41 144
MS.gene71964.t1 MTR_0140s0030 53.659 123 57 0 13 135 13 135 1.29e-41 143
MS.gene71964.t1 MTR_0489s0020 53.659 123 57 0 13 135 13 135 1.29e-41 143
MS.gene71964.t1 MTR_5g078950 62.745 102 38 0 12 113 6 107 1.51e-41 141
MS.gene71964.t1 MTR_2g064160 58.333 108 45 0 9 116 7 114 1.95e-41 142
MS.gene71964.t1 MTR_7g010210 60.748 107 42 0 10 116 9 115 2.18e-41 141
MS.gene71964.t1 MTR_7g087130 57.377 122 50 1 10 129 9 130 2.24e-41 142
MS.gene71964.t1 MTR_7g010210 60.748 107 42 0 10 116 9 115 2.26e-41 142
MS.gene71964.t1 MTR_4g082230 51.773 141 64 1 10 150 9 145 2.45e-41 144
MS.gene71964.t1 MTR_3g028740 59.813 107 43 0 10 116 19 125 2.95e-41 142
MS.gene71964.t1 MTR_4g065017 53.226 124 58 0 9 132 13 136 3.37e-41 142
MS.gene71964.t1 MTR_5g078800 61.905 105 40 0 13 117 7 111 3.53e-41 140
MS.gene71964.t1 MTR_7g110830 61.682 107 41 0 10 116 9 115 3.82e-41 142
MS.gene71964.t1 MTR_7g096930 55.462 119 53 0 10 128 9 127 3.91e-41 140
MS.gene71964.t1 MTR_6g012690 58.120 117 49 0 10 126 9 125 4.28e-41 142
MS.gene71964.t1 MTR_6g012180 58.537 123 47 1 10 132 9 127 4.83e-41 141
MS.gene71964.t1 MTR_7g076740 55.085 118 52 1 10 126 9 126 5.13e-41 141
MS.gene71964.t1 MTR_2g089450 44.805 154 82 2 10 163 9 159 9.62e-41 139
MS.gene71964.t1 MTR_3g039990 55.462 119 53 0 13 131 13 131 1.48e-40 140
MS.gene71964.t1 MTR_1g085640 59.813 107 43 0 10 116 9 115 1.59e-40 141
MS.gene71964.t1 MTR_8g098860 58.879 107 44 0 10 116 9 115 1.78e-40 140
MS.gene71964.t1 MTR_8g017540 44.118 170 85 3 10 174 55 219 2.13e-40 141
MS.gene71964.t1 MTR_5g010020 60.784 102 40 0 10 111 9 110 2.18e-40 140
MS.gene71964.t1 MTR_5g078860 60.000 105 42 0 13 117 7 111 2.18e-40 139
MS.gene71964.t1 MTR_6g055910 50.360 139 67 1 10 148 11 147 5.92e-40 137
MS.gene71964.t1 MTR_1g045610 53.390 118 55 0 10 127 18 135 7.94e-40 136
MS.gene71964.t1 MTR_4g063100 53.153 111 52 0 9 119 3 113 1.26e-39 136
MS.gene71964.t1 MTR_8g017440 57.009 107 46 0 10 116 9 115 1.34e-39 138
MS.gene71964.t1 MTR_1g086530 56.364 110 48 0 12 121 32 141 1.90e-39 136
MS.gene71964.t1 MTR_2g067420 58.252 103 43 0 10 112 11 113 3.50e-39 137
MS.gene71964.t1 MTR_4g102380 57.018 114 49 0 13 126 12 125 3.63e-39 135
MS.gene71964.t1 MTR_1g086510 54.545 121 52 1 4 121 9 129 4.04e-39 135
MS.gene71964.t1 MTR_2g089420 55.769 104 46 0 13 116 11 114 4.16e-39 139
MS.gene71964.t1 MTR_6g009430 48.227 141 71 1 10 150 9 147 4.38e-39 137
MS.gene71964.t1 MTR_1g110460 53.782 119 53 1 4 120 15 133 5.03e-39 136
MS.gene71964.t1 MTR_5g078140 44.311 167 83 3 13 173 12 174 5.34e-39 136
MS.gene71964.t1 MTR_2g099740 57.944 107 45 0 10 116 9 115 5.64e-39 138
MS.gene71964.t1 MTR_4g057635 58.333 108 44 1 10 116 9 116 6.48e-39 136
MS.gene71964.t1 MTR_3g065440 55.556 117 52 0 10 126 9 125 6.70e-39 135
MS.gene71964.t1 MTR_2g096380 43.949 157 86 1 9 165 2 156 6.71e-39 133
MS.gene71964.t1 MTR_7g111290 61.386 101 39 0 10 110 9 109 7.46e-39 137
MS.gene71964.t1 MTR_8g017390 58.333 108 44 1 10 116 9 116 1.08e-38 138
MS.gene71964.t1 MTR_8g031360 54.237 118 53 1 10 126 10 127 1.22e-38 134
MS.gene71964.t1 MTR_1g100667 56.364 110 48 0 9 118 9 118 1.36e-38 134
MS.gene71964.t1 MTR_5g078930 53.226 124 57 1 17 139 13 136 1.43e-38 132
MS.gene71964.t1 MTR_8g017340 58.716 109 44 1 9 116 8 116 1.48e-38 138
MS.gene71964.t1 MTR_0193s0090 59.223 103 42 0 13 115 7 109 1.83e-38 131
MS.gene71964.t1 MTR_8g017500 56.075 107 47 0 10 116 9 115 2.87e-38 135
MS.gene71964.t1 MTR_7g035075 56.303 119 48 2 13 131 14 128 2.95e-38 131
MS.gene71964.t1 MTR_3g103570 58.333 108 44 1 10 116 9 116 4.26e-38 134
MS.gene71964.t1 MTR_1g073170 56.863 102 44 0 15 116 22 123 4.95e-38 132
MS.gene71964.t1 MTR_1g062940 50.806 124 59 1 13 136 6 127 1.19e-37 130
MS.gene71964.t1 MTR_8g017350 57.798 109 45 1 9 116 8 116 1.41e-37 137
MS.gene71964.t1 MTR_7g102110 50.400 125 61 1 10 133 9 133 3.72e-37 130
MS.gene71964.t1 MTR_7g109320 58.333 120 47 1 10 129 9 125 4.09e-37 132
MS.gene71964.t1 MTR_1g017000 52.778 108 50 1 10 116 9 116 5.11e-37 129
MS.gene71964.t1 MTR_6g090405 51.200 125 58 2 10 133 9 131 5.38e-37 129
MS.gene71964.t1 MTR_2g095520 57.282 103 43 1 10 111 9 111 8.18e-37 130
MS.gene71964.t1 MTR_5g014990 56.481 108 46 1 10 116 9 116 1.14e-36 130
MS.gene71964.t1 MTR_4g097570 49.618 131 65 1 10 139 9 139 1.22e-36 129
MS.gene71964.t1 MTR_6g006030 49.587 121 61 0 13 133 14 134 1.34e-36 127
MS.gene71964.t1 MTR_1g017140 55.556 108 47 1 10 116 9 116 1.49e-36 130
MS.gene71964.t1 MTR_5g042030 51.754 114 55 0 13 126 7 120 2.01e-36 129
MS.gene71964.t1 MTR_3g052430 54.808 104 47 0 13 116 41 144 2.44e-36 133
MS.gene71964.t1 MTR_3g052450 49.194 124 56 1 13 129 40 163 6.66e-36 131
MS.gene71964.t1 MTR_3g011610 55.556 99 44 0 13 111 37 135 3.18e-35 129
MS.gene71964.t1 MTR_4g097570 49.242 132 65 2 10 139 9 140 5.67e-35 125
MS.gene71964.t1 MTR_8g042410 51.923 104 50 0 13 116 37 140 1.54e-33 125
MS.gene71964.t1 MTR_2g033170 56.881 109 47 0 13 121 24 132 1.57e-33 122
MS.gene71964.t1 MTR_1g021230 46.094 128 66 2 13 138 57 183 1.65e-33 124
MS.gene71964.t1 MTR_4g123040 56.881 109 47 0 13 121 24 132 2.62e-33 121
MS.gene71964.t1 MTR_4g128670 53.398 103 47 1 10 111 9 111 6.41e-33 120
MS.gene71964.t1 MTR_2g088170 55.769 104 46 0 13 116 29 132 6.59e-32 120
MS.gene71964.t1 MTR_6g055910 55.340 103 44 1 46 148 18 118 3.50e-31 114
MS.gene71964.t1 MTR_5g062790 48.980 98 49 1 15 111 11 108 1.31e-30 114
MS.gene71964.t1 MTR_7g111290 75.758 66 16 0 45 110 2 67 2.08e-30 114
MS.gene71964.t1 MTR_5g088080 46.939 98 51 1 15 111 14 111 7.85e-30 111
MS.gene71964.t1 MTR_5g088150 46.939 98 51 1 15 111 14 111 7.85e-30 111
MS.gene71964.t1 MTR_5g488210 46.939 98 51 1 15 111 14 111 7.85e-30 111
MS.gene71964.t1 MTR_5g488170 46.939 98 51 1 15 111 14 111 9.68e-30 110
MS.gene71964.t1 MTR_5g088640 46.939 98 51 1 15 111 14 111 9.69e-30 110
MS.gene71964.t1 MTR_1g083630 51.020 98 48 0 13 110 12 109 1.64e-29 114
MS.gene71964.t1 MTR_5g007300 58.750 80 33 0 10 89 61 140 3.12e-29 105
MS.gene71964.t1 MTR_3g463400 44.094 127 67 3 15 138 133 258 1.56e-28 110
MS.gene71964.t1 MTR_4g063100 64.789 71 25 0 46 116 11 81 1.63e-28 106
MS.gene71964.t1 MTR_5g088610 48.980 98 49 1 15 111 11 108 1.63e-28 109
MS.gene71964.t1 MTR_8g006470 45.631 103 55 1 10 111 7 109 1.67e-28 108
MS.gene71964.t1 MTR_2g096380 65.278 72 25 0 46 117 20 91 1.71e-28 106
MS.gene71964.t1 MTR_5g016510 38.776 147 87 3 15 159 5 150 2.89e-28 108
MS.gene71964.t1 MTR_3g045430 43.478 115 65 0 12 126 12 126 4.67e-28 107
MS.gene71964.t1 MTR_3g077650 41.912 136 74 3 2 135 166 298 2.28e-27 107
MS.gene71964.t1 MTR_5g070020 46.602 103 54 1 9 111 116 217 3.22e-27 105
MS.gene71964.t1 MTR_4g029540 40.000 120 71 1 13 131 10 129 7.41e-27 103
MS.gene71964.t1 MTR_4g019370 46.602 103 54 1 15 117 38 139 1.07e-26 104
MS.gene71964.t1 MTR_3g101290 45.631 103 55 1 15 117 37 138 3.34e-26 100
MS.gene71964.t1 MTR_6g074860 44.118 102 56 1 14 115 3 103 3.51e-26 100
MS.gene71964.t1 MTR_7g061330 37.342 158 89 2 15 172 77 224 3.59e-26 104
MS.gene71964.t1 MTR_6g015455 46.226 106 56 1 15 120 5 109 4.42e-26 105
MS.gene71964.t1 MTR_7g061330 37.342 158 89 2 15 172 113 260 4.93e-26 104
MS.gene71964.t1 MTR_7g461410 37.342 158 89 2 15 172 113 260 4.93e-26 104
MS.gene71964.t1 MTR_6g027340 47.423 97 50 1 14 110 15 110 5.00e-26 99.8
MS.gene71964.t1 MTR_4g094982 44.340 106 58 1 15 120 5 109 5.18e-26 101
MS.gene71964.t1 MTR_5g049190 40.310 129 76 1 10 138 14 141 7.43e-26 100
MS.gene71964.t1 MTR_4g082040 44.118 102 56 1 15 116 105 205 8.04e-26 103
MS.gene71964.t1 MTR_4g105660 45.872 109 57 2 4 111 168 275 1.03e-25 102
MS.gene71964.t1 MTR_4g128190 42.149 121 53 3 9 125 7 114 2.28e-25 99.0
MS.gene71964.t1 MTR_6g027360 46.602 103 52 2 13 115 76 175 4.22e-25 99.4
MS.gene71964.t1 MTR_5g041570 42.157 102 58 1 15 116 134 234 1.08e-24 100
MS.gene71964.t1 MTR_7g035350 45.794 107 55 2 18 124 228 331 2.29e-24 99.4
MS.gene71964.t1 MTR_5g082910 43.434 99 55 1 15 113 19 116 2.42e-24 97.1
MS.gene71964.t1 MTR_3g110028 45.098 102 55 1 15 116 85 185 5.17e-24 99.0
MS.gene71964.t1 MTR_7g037260 45.361 97 52 1 15 111 145 240 6.06e-24 97.1
MS.gene71964.t1 MTR_7g451170 45.361 97 52 1 15 111 191 286 7.58e-24 97.4
MS.gene71964.t1 MTR_4g088015 45.361 97 52 1 15 111 221 316 8.95e-24 97.8
MS.gene71964.t1 MTR_1g057980 47.423 97 50 1 15 111 80 175 1.24e-23 95.5
MS.gene71964.t1 MTR_1g026870 45.098 102 55 1 15 116 85 185 2.07e-23 97.4
MS.gene71964.t1 MTR_3g089045 38.400 125 76 1 15 139 16 139 3.34e-23 94.4
MS.gene71964.t1 MTR_0023s0210 53.247 77 36 0 13 89 7 83 5.16e-23 88.2
MS.gene71964.t1 MTR_1g085880 43.363 113 62 2 9 119 7 119 1.90e-22 90.1
MS.gene71964.t1 MTR_6g027370 38.889 144 80 4 5 144 90 229 3.47e-22 92.4
MS.gene71964.t1 MTR_1g085770 43.363 113 62 2 9 119 7 119 5.08e-22 91.3
MS.gene71964.t1 MTR_5g010650 45.745 94 50 1 17 110 112 204 9.90e-22 92.0
MS.gene71964.t1 MTR_7g450950 42.268 97 55 1 15 111 157 252 1.58e-21 90.5
MS.gene71964.t1 MTR_7g086960 32.927 164 103 3 14 173 88 248 5.30e-21 89.4
MS.gene71964.t1 MTR_7g061550 40.816 98 56 1 14 109 6 103 5.63e-20 86.3
MS.gene71964.t1 MTR_7g037130 40.385 104 60 2 15 117 145 247 1.39e-19 85.1
MS.gene71964.t1 MTR_5g038910 42.857 105 58 2 17 121 28 130 3.99e-19 84.3
MS.gene71964.t1 MTR_5g038910 42.857 105 58 2 17 121 28 130 4.25e-19 84.7
MS.gene71964.t1 MTR_8g468380 38.835 103 62 1 9 111 16 117 7.26e-17 78.2
MS.gene71964.t1 MTR_2g088730 73.171 41 11 0 71 111 34 74 2.08e-15 68.6
MS.gene71964.t1 MTR_6g055910 50.667 75 35 1 71 145 2 74 2.86e-15 71.6
MS.gene71964.t1 MTR_4g063100 60.870 46 18 0 71 116 1 46 4.98e-13 65.1
MS.gene71964.t1 MTR_2g096380 59.574 47 19 0 71 117 1 47 1.63e-12 63.2
MS.gene71964.t1 MTR_4g046737 63.415 41 15 0 71 111 28 68 1.90e-12 60.5
MS.gene71964.t1 MTR_2g023100 45.833 48 26 0 71 118 29 76 3.00e-11 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71964.t1 AT5G35550 62.308 130 49 0 10 139 11 140 2.96e-51 166
MS.gene71964.t1 AT5G14750 47.929 169 71 2 15 166 18 186 1.30e-49 160
MS.gene71964.t1 AT3G13540 62.712 118 44 0 9 126 19 136 2.47e-49 160
MS.gene71964.t1 AT1G22640 66.355 107 36 0 10 116 9 115 5.55e-49 160
MS.gene71964.t1 AT5G40330 53.103 145 54 2 15 145 14 158 9.46e-49 158
MS.gene71964.t1 AT1G35515 44.330 194 85 3 10 187 9 195 1.26e-48 157
MS.gene71964.t1 AT4G09460 60.684 117 46 0 10 126 9 125 1.78e-48 158
MS.gene71964.t1 AT4G38620 64.486 107 38 0 10 116 9 115 2.99e-48 159
MS.gene71964.t1 AT5G52600 57.692 130 55 0 10 139 9 138 3.23e-48 156
MS.gene71964.t1 AT2G16720 64.486 107 38 0 10 116 9 115 5.75e-48 158
MS.gene71964.t1 AT2G47460 57.364 129 55 0 10 138 9 137 1.75e-47 159
MS.gene71964.t1 AT5G16770 64.035 114 41 0 13 126 12 125 2.45e-47 158
MS.gene71964.t1 AT5G16770 64.035 114 41 0 13 126 12 125 2.45e-47 158
MS.gene71964.t1 AT4G34990 57.895 133 43 3 10 132 9 138 2.98e-47 156
MS.gene71964.t1 AT4G05100 60.504 119 47 0 10 128 10 128 3.07e-47 157
MS.gene71964.t1 AT5G16770 64.035 114 41 0 13 126 12 125 4.23e-47 157
MS.gene71964.t1 AT5G16770 64.035 114 41 0 13 126 12 125 4.23e-47 157
MS.gene71964.t1 AT4G21440 60.504 119 47 0 10 128 9 127 5.87e-47 157
MS.gene71964.t1 AT4G28110 62.617 107 40 0 10 116 9 115 1.34e-46 154
MS.gene71964.t1 AT5G54230 62.281 114 43 0 13 126 12 125 2.09e-46 155
MS.gene71964.t1 AT1G66370 63.636 110 40 0 7 116 2 111 3.73e-46 152
MS.gene71964.t1 AT3G02940 62.281 114 43 0 13 126 12 125 6.33e-46 154
MS.gene71964.t1 AT3G27920 63.725 102 37 0 15 116 16 117 7.58e-46 151
MS.gene71964.t1 AT3G02940 62.281 114 43 0 13 126 12 125 1.05e-45 153
MS.gene71964.t1 AT3G02940 62.281 114 43 0 13 126 12 125 1.05e-45 153
MS.gene71964.t1 AT3G62610 58.197 122 51 0 10 131 9 130 3.01e-45 153
MS.gene71964.t1 AT5G56110 58.120 117 49 0 10 126 9 125 1.09e-44 150
MS.gene71964.t1 AT3G23250 58.824 119 48 1 10 127 9 127 1.99e-44 149
MS.gene71964.t1 AT5G12870 60.909 110 43 0 13 122 18 127 4.47e-44 148
MS.gene71964.t1 AT5G60890 56.349 126 50 1 10 130 9 134 7.11e-44 148
MS.gene71964.t1 AT4G12350 46.429 168 77 1 10 164 9 176 7.75e-44 147
MS.gene71964.t1 AT5G10280 57.018 114 49 0 13 126 12 125 8.60e-44 149
MS.gene71964.t1 AT5G49330 63.462 104 38 0 13 116 12 115 1.35e-43 149
MS.gene71964.t1 AT1G57560 43.147 197 91 4 10 197 9 193 1.40e-43 148
MS.gene71964.t1 AT5G65230 57.895 114 48 0 13 126 12 125 4.04e-43 146
MS.gene71964.t1 AT4G17785 58.772 114 47 0 13 126 13 126 5.25e-43 147
MS.gene71964.t1 AT4G17785 58.772 114 47 0 13 126 13 126 5.55e-43 147
MS.gene71964.t1 AT1G06180 57.658 111 47 0 13 123 12 122 9.49e-43 144
MS.gene71964.t1 AT1G74080 61.905 105 40 0 11 115 10 114 1.90e-42 145
MS.gene71964.t1 AT5G15310 62.500 104 39 0 13 116 12 115 2.03e-42 145
MS.gene71964.t1 AT2G47190 52.713 129 58 1 8 133 12 140 2.16e-42 144
MS.gene71964.t1 AT5G15310 62.500 104 39 0 13 116 12 115 2.34e-42 144
MS.gene71964.t1 AT5G15310 62.500 104 39 0 13 116 12 115 2.45e-42 142
MS.gene71964.t1 AT3G01140 53.333 135 62 1 10 143 9 143 4.96e-42 144
MS.gene71964.t1 AT2G31180 45.665 173 74 3 10 162 9 181 5.65e-42 142
MS.gene71964.t1 AT5G61420 49.333 150 70 2 4 148 3 151 6.00e-42 145
MS.gene71964.t1 AT3G30210 45.570 158 69 1 15 155 29 186 9.03e-42 142
MS.gene71964.t1 AT3G01140 53.333 135 62 1 10 143 52 186 1.06e-41 145
MS.gene71964.t1 AT1G16490 57.798 109 46 0 10 118 11 119 1.16e-41 142
MS.gene71964.t1 AT1G57560 60.748 107 42 0 10 116 9 115 1.35e-41 142
MS.gene71964.t1 AT1G09540 61.682 107 41 0 10 116 9 115 1.42e-41 144
MS.gene71964.t1 AT5G26660 62.617 107 40 0 10 116 9 115 3.20e-41 142
MS.gene71964.t1 AT1G63910 53.846 130 57 1 10 136 9 138 3.83e-41 143
MS.gene71964.t1 AT5G07700 56.897 116 49 1 1 116 1 115 4.25e-41 142
MS.gene71964.t1 AT5G07700 56.897 116 49 1 1 116 1 115 4.25e-41 142
MS.gene71964.t1 AT4G01680 60.748 107 42 0 10 116 9 115 4.35e-41 139
MS.gene71964.t1 AT3G53200 58.879 107 44 0 10 116 6 112 5.43e-41 139
MS.gene71964.t1 AT3G12720 56.075 107 47 0 10 116 19 125 5.83e-41 141
MS.gene71964.t1 AT5G07690 58.929 112 46 0 4 115 3 114 6.93e-41 141
MS.gene71964.t1 AT3G08500 59.813 107 43 0 10 116 27 133 7.41e-41 141
MS.gene71964.t1 AT1G79180 50.388 129 61 1 10 135 11 139 7.73e-41 140
MS.gene71964.t1 AT1G18570 61.538 104 40 0 13 116 13 116 8.14e-41 141
MS.gene71964.t1 AT1G34670 57.895 114 48 0 13 126 12 125 1.02e-40 142
MS.gene71964.t1 AT1G66380 65.741 108 37 0 9 116 4 111 1.74e-40 134
MS.gene71964.t1 AT3G61250 55.263 114 51 0 13 126 12 125 1.80e-40 139
MS.gene71964.t1 AT1G56160 57.798 109 46 0 10 118 11 119 2.08e-40 139
MS.gene71964.t1 AT4G01680 60.748 107 42 0 10 116 9 115 2.12e-40 140
MS.gene71964.t1 AT3G13890 57.944 107 45 0 10 116 9 115 2.35e-40 140
MS.gene71964.t1 AT5G62470 57.522 113 48 0 13 125 12 124 2.54e-40 140
MS.gene71964.t1 AT1G56650 67.308 104 34 0 13 116 8 111 4.46e-40 137
MS.gene71964.t1 AT1G74650 61.538 104 40 0 13 116 12 115 5.18e-40 139
MS.gene71964.t1 AT1G66230 52.344 128 61 0 10 137 9 136 5.93e-40 137
MS.gene71964.t1 AT3G28910 56.637 113 49 0 10 122 9 121 6.44e-40 139
MS.gene71964.t1 AT1G48000 52.893 121 57 0 13 133 32 152 8.06e-40 136
MS.gene71964.t1 AT3G47600 59.615 104 42 0 13 116 12 115 1.13e-39 138
MS.gene71964.t1 AT4G13480 52.033 123 54 1 9 131 2 119 1.47e-39 136
MS.gene71964.t1 AT1G08810 60.577 104 41 0 13 116 12 115 1.86e-39 136
MS.gene71964.t1 AT3G01530 61.765 102 39 0 12 113 24 125 3.97e-39 133
MS.gene71964.t1 AT5G59780 51.667 120 57 1 9 128 4 122 4.26e-39 134
MS.gene71964.t1 AT1G74430 51.639 122 54 1 13 129 12 133 4.85e-39 135
MS.gene71964.t1 AT5G14750 50.370 135 50 2 49 166 18 152 5.80e-39 132
MS.gene71964.t1 AT1G66390 64.815 108 38 0 9 116 4 111 6.12e-39 134
MS.gene71964.t1 AT4G25560 58.621 116 45 1 1 116 1 113 9.33e-39 134
MS.gene71964.t1 AT3G24310 56.881 109 47 0 9 117 14 122 9.58e-39 134
MS.gene71964.t1 AT5G62470 57.522 113 47 1 13 125 12 123 9.97e-39 136
MS.gene71964.t1 AT4G22680 55.556 117 52 0 10 126 9 125 1.25e-38 134
MS.gene71964.t1 AT5G14340 50.758 132 65 0 4 135 15 146 1.46e-38 134
MS.gene71964.t1 AT3G12820 56.075 107 47 0 10 116 11 117 1.76e-38 132
MS.gene71964.t1 AT5G35550 65.657 99 34 0 40 138 44 142 4.06e-38 132
MS.gene71964.t1 AT1G18710 53.509 114 53 0 13 126 12 125 5.29e-38 132
MS.gene71964.t1 AT3G46130 53.913 115 51 1 15 129 11 123 7.33e-38 131
MS.gene71964.t1 AT3G28470 53.922 102 47 0 10 111 9 110 8.44e-38 133
MS.gene71964.t1 AT2G26960 55.769 104 46 0 10 113 17 120 9.80e-38 135
MS.gene71964.t1 AT5G16600 55.556 117 52 0 10 126 9 125 1.63e-37 132
MS.gene71964.t1 AT3G27810 40.719 167 88 2 15 181 22 177 2.32e-37 129
MS.gene71964.t1 AT3G13890 53.448 116 45 1 10 116 9 124 2.74e-37 132
MS.gene71964.t1 AT4G01680 54.622 119 42 1 10 116 9 127 6.35e-37 131
MS.gene71964.t1 AT5G40350 53.913 115 50 1 15 129 19 130 2.06e-36 126
MS.gene71964.t1 AT5G55020 56.436 101 44 0 13 113 26 126 2.48e-36 132
MS.gene71964.t1 AT1G68320 55.455 110 49 0 11 120 17 126 3.69e-36 128
MS.gene71964.t1 AT3G49690 56.481 108 46 1 10 116 9 116 3.84e-36 128
MS.gene71964.t1 AT5G23000 56.481 108 46 1 10 116 9 116 4.37e-36 129
MS.gene71964.t1 AT2G32460 53.846 104 48 0 13 116 18 121 5.60e-36 131
MS.gene71964.t1 AT2G32460 53.846 104 48 0 13 116 6 109 6.17e-36 131
MS.gene71964.t1 AT5G06100 40.000 175 95 4 13 181 32 202 7.41e-36 130
MS.gene71964.t1 AT5G62320 38.542 192 103 5 1 177 1 192 8.50e-36 125
MS.gene71964.t1 AT4G37780 53.704 108 49 1 10 116 9 116 1.06e-35 127
MS.gene71964.t1 AT4G26930 53.922 102 47 0 12 113 18 119 1.72e-35 128
MS.gene71964.t1 AT5G65790 55.556 108 47 1 10 116 9 116 2.25e-35 128
MS.gene71964.t1 AT5G06100 39.773 176 96 4 12 181 31 202 2.33e-35 130
MS.gene71964.t1 AT5G06100 39.773 176 96 4 12 181 31 202 2.33e-35 130
MS.gene71964.t1 AT5G06100 39.773 176 96 4 12 181 31 202 2.33e-35 130
MS.gene71964.t1 AT5G06100 39.773 176 96 4 12 181 31 202 2.33e-35 130
MS.gene71964.t1 AT1G25340 54.717 106 48 0 15 120 20 125 3.04e-35 125
MS.gene71964.t1 AT5G57620 55.556 108 47 1 10 116 9 116 3.46e-35 126
MS.gene71964.t1 AT5G52260 58.879 107 44 0 10 116 9 115 4.85e-35 124
MS.gene71964.t1 AT1G79180 40.123 162 61 2 10 135 11 172 1.23e-34 125
MS.gene71964.t1 AT3G48920 44.615 130 71 1 9 138 14 142 1.84e-34 123
MS.gene71964.t1 AT2G36890 53.704 108 49 1 10 116 9 116 2.20e-34 124
MS.gene71964.t1 AT3G11440 49.533 107 54 0 10 116 38 144 2.58e-34 126
MS.gene71964.t1 AT2G36890 53.704 108 49 1 10 116 50 157 3.42e-34 124
MS.gene71964.t1 AT3G11440 49.533 107 54 0 10 116 38 144 5.46e-34 127
MS.gene71964.t1 AT3G11440 49.533 107 54 0 10 116 38 144 5.46e-34 127
MS.gene71964.t1 AT3G11440 49.533 107 54 0 10 116 38 144 5.46e-34 127
MS.gene71964.t1 AT3G06490 55.963 109 48 0 13 121 19 127 5.43e-33 120
MS.gene71964.t1 AT5G26660 76.056 71 17 0 46 116 14 84 1.50e-32 119
MS.gene71964.t1 AT5G49620 57.009 107 46 0 15 121 28 134 5.52e-32 117
MS.gene71964.t1 AT1G25340 51.887 106 46 1 15 120 20 120 1.02e-30 113
MS.gene71964.t1 AT1G25340 51.887 106 46 1 15 120 20 120 1.72e-30 114
MS.gene71964.t1 AT3G46130 63.291 79 29 0 39 117 3 81 2.69e-30 111
MS.gene71964.t1 AT3G12820 70.588 68 20 0 49 116 2 69 6.76e-30 109
MS.gene71964.t1 AT5G14750 46.400 125 50 2 59 166 1 125 1.11e-29 107
MS.gene71964.t1 AT5G14750 46.400 125 50 2 59 166 1 125 1.11e-29 107
MS.gene71964.t1 AT1G66380 78.873 71 15 0 46 116 8 78 1.37e-29 105
MS.gene71964.t1 AT3G53200 69.014 71 22 0 46 116 9 79 2.29e-29 108
MS.gene71964.t1 AT3G27810 41.176 136 69 2 46 181 4 128 2.43e-29 107
MS.gene71964.t1 AT3G47600 59.756 82 33 0 46 127 39 120 2.70e-29 110
MS.gene71964.t1 AT5G59780 60.241 83 32 1 46 128 20 101 2.89e-29 108
MS.gene71964.t1 AT3G46130 61.905 84 30 1 46 129 20 101 4.05e-29 108
MS.gene71964.t1 AT2G26950 45.098 102 56 0 10 111 13 114 7.67e-29 110
MS.gene71964.t1 AT3G60460 45.872 109 58 1 4 111 2 110 1.75e-28 108
MS.gene71964.t1 AT3G27785 49.524 105 51 2 8 111 181 284 2.58e-28 110
MS.gene71964.t1 AT5G49620 50.413 121 46 1 15 121 28 148 2.94e-28 108
MS.gene71964.t1 AT5G40350 60.000 85 31 1 44 128 3 84 3.32e-28 104
MS.gene71964.t1 AT4G18770 41.860 129 72 2 10 138 212 337 9.61e-28 108
MS.gene71964.t1 AT5G40360 45.098 102 55 1 10 111 153 253 6.41e-27 105
MS.gene71964.t1 AT1G69560 41.667 108 62 1 9 116 101 207 6.71e-27 104
MS.gene71964.t1 AT2G39880 42.975 121 68 1 15 135 50 169 6.98e-27 105
MS.gene71964.t1 AT1G69560 41.667 108 62 1 9 116 117 223 8.25e-27 104
MS.gene71964.t1 AT1G17950 33.708 178 100 6 14 189 4 165 1.11e-26 102
MS.gene71964.t1 AT4G37260 46.903 113 57 2 8 118 4 115 1.26e-26 103
MS.gene71964.t1 AT1G22640 74.138 58 15 0 59 116 1 58 1.38e-26 100
MS.gene71964.t1 AT5G11510 39.583 144 72 2 15 144 81 223 4.33e-26 105
MS.gene71964.t1 AT5G11510 39.583 144 72 2 15 144 81 223 4.33e-26 105
MS.gene71964.t1 AT5G11510 39.583 144 72 2 15 144 81 223 4.33e-26 105
MS.gene71964.t1 AT1G26780 42.857 105 59 1 12 116 95 198 4.40e-26 101
MS.gene71964.t1 AT5G11510 39.583 144 72 2 15 144 81 223 5.03e-26 104
MS.gene71964.t1 AT5G11510 39.583 144 72 2 15 144 81 223 5.15e-26 104
MS.gene71964.t1 AT1G26780 42.857 105 59 1 12 116 95 198 6.92e-26 102
MS.gene71964.t1 AT5G02320 48.039 102 52 1 15 116 127 227 7.41e-26 103
MS.gene71964.t1 AT5G02320 48.039 102 52 1 15 116 127 227 7.41e-26 103
MS.gene71964.t1 AT5G02320 48.039 102 52 1 15 116 67 167 7.49e-26 103
MS.gene71964.t1 AT2G23290 46.491 114 58 2 7 118 3 115 1.06e-25 101
MS.gene71964.t1 AT3G09230 47.059 102 53 1 15 116 55 155 1.61e-25 102
MS.gene71964.t1 AT3G09370 36.943 157 94 3 15 168 130 284 2.16e-25 102
MS.gene71964.t1 AT3G09370 36.943 157 94 3 15 168 135 289 2.19e-25 102
MS.gene71964.t1 AT3G09370 36.943 157 94 3 15 168 143 297 2.40e-25 102
MS.gene71964.t1 AT5G58850 42.857 112 63 1 15 126 105 215 5.56e-25 100
MS.gene71964.t1 AT4G33450 39.024 123 74 1 10 132 14 135 5.63e-25 98.2
MS.gene71964.t1 AT3G55730 46.729 107 54 2 15 120 56 160 6.03e-25 100
MS.gene71964.t1 AT3G50060 35.976 164 92 4 15 178 6 156 1.05e-24 98.6
MS.gene71964.t1 AT3G23250 62.857 70 25 1 59 127 1 70 1.19e-24 96.7
MS.gene71964.t1 AT5G67300 46.078 102 54 1 15 116 6 106 1.61e-24 97.8
MS.gene71964.t1 AT5G11050 45.361 97 52 1 15 111 105 200 5.46e-24 98.2
MS.gene71964.t1 AT3G29020 41.748 103 59 1 14 116 66 167 5.96e-24 96.7
MS.gene71964.t1 AT3G29020 41.748 103 59 1 14 116 64 165 6.47e-24 94.7
MS.gene71964.t1 AT1G66380 58.824 85 35 0 9 93 4 88 7.24e-24 91.3
MS.gene71964.t1 AT1G71030 63.077 65 24 0 52 116 5 69 7.72e-24 93.2
MS.gene71964.t1 AT1G71030 53.750 80 36 1 37 116 5 83 7.72e-24 93.6
MS.gene71964.t1 AT2G25230 45.098 102 55 1 10 111 21 121 8.87e-24 94.7
MS.gene71964.t1 AT5G17800 39.286 112 67 1 5 116 83 193 5.21e-23 94.4
MS.gene71964.t1 AT4G32730 43.137 102 57 1 15 116 87 187 8.12e-23 95.9
MS.gene71964.t1 AT4G32730 43.137 102 57 1 15 116 87 187 8.12e-23 95.9
MS.gene71964.t1 AT4G32730 43.137 102 57 1 15 116 87 187 8.12e-23 95.9
MS.gene71964.t1 AT4G32730 43.137 102 57 1 15 116 87 187 8.12e-23 95.9
MS.gene71964.t1 AT4G32730 43.137 102 57 1 15 116 87 187 8.64e-23 95.5
MS.gene71964.t1 AT1G73410 32.402 179 109 5 14 189 5 174 1.31e-22 90.9
MS.gene71964.t1 AT1G73410 32.402 179 109 4 14 189 5 174 1.55e-22 91.7
MS.gene71964.t1 AT5G40430 40.196 102 59 2 10 111 49 148 1.97e-20 86.3
MS.gene71964.t1 AT1G14350 33.962 159 100 4 17 173 27 182 3.87e-20 87.4
MS.gene71964.t1 AT1G14350 33.962 159 100 4 17 173 27 182 3.87e-20 87.4
MS.gene71964.t1 AT5G39700 42.708 96 54 1 16 111 57 151 3.88e-20 84.0
MS.gene71964.t1 AT1G18960 37.931 116 64 3 14 124 9 121 4.38e-20 86.3
MS.gene71964.t1 AT2G37630 40.541 111 62 2 15 123 4 112 1.53e-19 85.5
MS.gene71964.t1 AT2G02820 37.864 103 63 1 17 119 32 133 9.89e-18 80.1
MS.gene71964.t1 AT2G02820 33.333 147 81 3 17 158 32 166 1.15e-17 80.5
MS.gene71964.t1 AT2G02820 40.000 100 58 2 17 116 32 129 1.22e-17 80.5
MS.gene71964.t1 AT4G00540 35.345 116 68 3 12 124 100 211 2.70e-16 76.3
MS.gene71964.t1 AT4G00540 34.746 118 68 5 4 113 36 152 7.12e-12 63.5
MS.gene71964.t1 AT4G00540 35.345 116 68 3 12 124 98 209 2.84e-16 76.6
MS.gene71964.t1 AT4G00540 34.746 118 68 5 4 113 34 150 8.31e-12 63.5
MS.gene71964.t1 AT4G25560 69.565 46 14 0 71 116 2 47 1.32e-14 69.7
MS.gene71964.t1 AT4G01060 65.000 40 14 0 70 109 34 73 7.67e-14 64.3
MS.gene71964.t1 AT4G01060 65.000 40 14 0 70 109 31 70 8.33e-14 64.3
MS.gene71964.t1 AT5G59780 53.448 58 26 1 71 128 1 57 9.30e-14 66.6
MS.gene71964.t1 AT4G01060 65.000 40 14 0 70 109 32 71 1.06e-13 63.9
MS.gene71964.t1 AT3G46130 61.702 47 18 0 71 117 1 47 1.47e-13 66.6
MS.gene71964.t1 AT2G46410 65.000 40 14 0 70 109 37 76 3.04e-13 63.2
MS.gene71964.t1 AT2G30424 50.000 50 25 0 70 119 35 84 4.41e-12 60.5
MS.gene71964.t1 AT5G53200 57.500 40 17 0 70 109 32 71 6.75e-12 60.1
MS.gene71964.t1 AT1G01380 61.538 39 15 0 71 109 34 72 7.41e-12 59.3
MS.gene71964.t1 AT1G74650 69.231 39 12 0 78 116 1 39 9.00e-12 62.8
MS.gene71964.t1 AT3G28910 57.778 45 19 0 78 122 1 45 1.09e-11 62.4
MS.gene71964.t1 AT1G14350 34.454 119 74 3 57 173 23 139 1.18e-11 63.2
MS.gene71964.t1 AT1G14350 34.454 119 74 3 57 173 23 139 1.18e-11 63.2
MS.gene71964.t1 AT2G30420 42.188 64 33 1 70 129 39 102 3.41e-11 58.5

Find 47 sgRNAs with CRISPR-Local

Find 67 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTGTGTAGTGGAAGTTTC+TGG 0.164235 8.3:+20475603 None:intergenic
ATTTCTTGGCACCATGAATT+TGG 0.171949 8.3:+20476191 None:intergenic
ATTAGGCTTCACAAACTTCT+TGG 0.284141 8.3:-20475921 MS.gene71964:CDS
AAGAAGAGGATTTGATTATT+AGG 0.284473 8.3:-20475938 MS.gene71964:CDS
GTTATGGCACCCAGAAAATA+TGG 0.298421 8.3:-20476283 MS.gene71964:CDS
TTGATAGCTGGAAGACTTCC+AGG 0.301289 8.3:-20475699 MS.gene71964:CDS
CTATTCATTGTTTCCTTAGT+AGG 0.316905 8.3:+20476259 None:intergenic
ATGTTCCCTCTCTTGATATT+GGG 0.331261 8.3:+20475969 None:intergenic
AATGTTCCCTCTCTTGATAT+TGG 0.336344 8.3:+20475968 None:intergenic
TTCACAAACTTCTTGGAAAC+AGG 0.350411 8.3:-20475914 MS.gene71964:intron
CCTCAGATGTTTCTGTTCTC+AGG 0.365977 8.3:+20475399 None:intergenic
AAGAACCATATGGGTTTGAT+TGG 0.366727 8.3:-20475458 MS.gene71964:CDS
TGATTGGGTCAATAAATTCT+TGG 0.369426 8.3:-20475442 MS.gene71964:CDS
AAAACCGTTGCAAACAATTC+AGG 0.371468 8.3:-20476166 MS.gene71964:intron
ACAACGAAATTAAGAACTAT+TGG 0.381215 8.3:-20475668 MS.gene71964:CDS
AAATTCATGGTGCCAAGAAA+TGG 0.392964 8.3:-20476189 MS.gene71964:CDS
GCACAATGCATCCAAATTCA+TGG 0.421820 8.3:-20476202 MS.gene71964:CDS
ATAGGTGTGGAAAGAGTTGC+AGG 0.428963 8.3:-20476016 MS.gene71964:CDS
TTGCCCAAGACAATGTTGTT+GGG 0.441485 8.3:-20475575 MS.gene71964:CDS
GAGAATAAAGATTCAATTGG+TGG 0.441550 8.3:-20475537 MS.gene71964:CDS
TTAGAGAATAAAGATTCAAT+TGG 0.442024 8.3:-20475540 MS.gene71964:CDS
TTGACCCAATCAAACCCATA+TGG 0.448386 8.3:+20475453 None:intergenic
ATCCCCAACAACATTGTCTT+GGG 0.453130 8.3:+20475572 None:intergenic
CAGAAAATATGGACCTACTA+AGG 0.466289 8.3:-20476272 MS.gene71964:CDS
TATCCCCAACAACATTGTCT+TGG 0.480158 8.3:+20475571 None:intergenic
ATTGCCCAAGACAATGTTGT+TGG 0.485503 8.3:-20475576 MS.gene71964:CDS
TGAAGGTGGTCTTTGATAGC+TGG 0.492221 8.3:-20475711 MS.gene71964:intron
GGCAATAGTTTCTTGTGTAG+TGG 0.500047 8.3:+20475593 None:intergenic
ACTAAGGAAACAATGAATAG+AGG 0.506733 8.3:-20476256 MS.gene71964:CDS
AGAACCATATGGGTTTGATT+GGG 0.507623 8.3:-20475457 MS.gene71964:CDS
ATAAATTCTTGGAAATTGAT+CGG 0.509384 8.3:-20475431 MS.gene71964:CDS
TTTCCACTGAAGAACCATAT+GGG 0.520720 8.3:-20475467 MS.gene71964:CDS
GAAAGAGTTGCAGGCTAAGA+TGG 0.524821 8.3:-20476007 MS.gene71964:CDS
ATTTCGTTGTCTGTTCGCCC+TGG 0.533830 8.3:+20475681 None:intergenic
GAACATTTCAGATGAAGAAG+AGG 0.534571 8.3:-20475952 MS.gene71964:CDS
TGCCCAAGACAATGTTGTTG+GGG 0.564234 8.3:-20475574 MS.gene71964:CDS
ATTACCTGAATTGTTTGCAA+CGG 0.581651 8.3:+20476162 None:intergenic
TTTGCAGGTTTGAATAGGTG+TGG 0.587834 8.3:-20476029 MS.gene71964:intron
CTTAGACCCAATATCAAGAG+AGG 0.591885 8.3:-20475975 MS.gene71964:CDS
AAACCCATATGGTTCTTCAG+TGG 0.603396 8.3:+20475464 None:intergenic
TGATAGCTGGAAGACTTCCA+GGG 0.621922 8.3:-20475698 MS.gene71964:CDS
AAACAATGAATAGAGGAGCA+TGG 0.625013 8.3:-20476249 MS.gene71964:CDS
CCTGAGAACAGAAACATCTG+AGG 0.636993 8.3:-20475399 None:intergenic
GAATAGAGGAGCATGGACCC+AGG 0.637505 8.3:-20476242 MS.gene71964:CDS
TTAGACCCAATATCAAGAGA+GGG 0.658332 8.3:-20475974 MS.gene71964:CDS
CTGAGAACAGAAACATCTGA+GGG 0.665777 8.3:-20475398 None:intergenic
TAGAGGAGCATGGACCCAGG+AGG 0.710601 8.3:-20476239 MS.gene71964:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGTAATAAAAGAATAACTT+TGG + chr8.3:20475549-20475568 None:intergenic 15.0%
!! ATAAATTCTTGGAAATTGAT+CGG - chr8.3:20476250-20476269 MS.gene71964:CDS 20.0%
!! TTACAAGTTTAGAAAAGAAA+GGG - chr8.3:20475585-20475604 MS.gene71964:CDS 20.0%
!! TTAGAGAATAAAGATTCAAT+TGG - chr8.3:20476141-20476160 MS.gene71964:intron 20.0%
! AAGAAGAGGATTTGATTATT+AGG - chr8.3:20475743-20475762 MS.gene71964:intron 25.0%
! ACAACGAAATTAAGAACTAT+TGG - chr8.3:20476013-20476032 MS.gene71964:CDS 25.0%
! CTTACAAGTTTAGAAAAGAA+AGG - chr8.3:20475584-20475603 MS.gene71964:CDS 25.0%
! TACAAGTTTAGAAAAGAAAG+GGG - chr8.3:20475586-20475605 MS.gene71964:CDS 25.0%
ACAAGTTTAGAAAAGAAAGG+GGG - chr8.3:20475587-20475606 MS.gene71964:CDS 30.0%
ACTAAGGAAACAATGAATAG+AGG - chr8.3:20475425-20475444 MS.gene71964:CDS 30.0%
ATTACCTGAATTGTTTGCAA+CGG + chr8.3:20475522-20475541 None:intergenic 30.0%
CTATTCATTGTTTCCTTAGT+AGG + chr8.3:20475425-20475444 None:intergenic 30.0%
GAGAATAAAGATTCAATTGG+TGG - chr8.3:20476144-20476163 MS.gene71964:intron 30.0%
GTTAACTTTCTTAGCATTTG+TGG - chr8.3:20475927-20475946 MS.gene71964:CDS 30.0%
TGATTGGGTCAATAAATTCT+TGG - chr8.3:20476239-20476258 MS.gene71964:CDS 30.0%
! ATCTGAAATGTGTGATACAT+AGG - chr8.3:20475842-20475861 MS.gene71964:intron 30.0%
! TTAGTAGGTCCATATTTTCT+GGG + chr8.3:20475410-20475429 None:intergenic 30.0%
!! TTTTGTTTGCAGGTTTGAAT+AGG - chr8.3:20475647-20475666 MS.gene71964:CDS 30.0%
!!! AGTTTTTTGGTATATGAAGG+TGG - chr8.3:20475956-20475975 MS.gene71964:CDS 30.0%
!!! TGGAGTTTTTTGGTATATGA+AGG - chr8.3:20475953-20475972 MS.gene71964:CDS 30.0%
AAAACCGTTGCAAACAATTC+AGG - chr8.3:20475515-20475534 MS.gene71964:CDS 35.0%
AAACAATGAATAGAGGAGCA+TGG - chr8.3:20475432-20475451 MS.gene71964:CDS 35.0%
AAGAACCATATGGGTTTGAT+TGG - chr8.3:20476223-20476242 MS.gene71964:CDS 35.0%
AATGTTCCCTCTCTTGATAT+TGG + chr8.3:20475716-20475735 None:intergenic 35.0%
AGAACCATATGGGTTTGATT+GGG - chr8.3:20476224-20476243 MS.gene71964:CDS 35.0%
ATGTTCCCTCTCTTGATATT+GGG + chr8.3:20475715-20475734 None:intergenic 35.0%
ATTAGGCTTCACAAACTTCT+TGG - chr8.3:20475760-20475779 MS.gene71964:intron 35.0%
ATTTCTTGGCACCATGAATT+TGG + chr8.3:20475493-20475512 None:intergenic 35.0%
CAAAATTTCAGCACTTGCTT+TGG + chr8.3:20475632-20475651 None:intergenic 35.0%
CAGAAAATATGGACCTACTA+AGG - chr8.3:20475409-20475428 MS.gene71964:CDS 35.0%
GAACATTTCAGATGAAGAAG+AGG - chr8.3:20475729-20475748 MS.gene71964:intron 35.0%
TTAGACCCAATATCAAGAGA+GGG - chr8.3:20475707-20475726 MS.gene71964:CDS 35.0%
TTCACAAACTTCTTGGAAAC+AGG - chr8.3:20475767-20475786 MS.gene71964:intron 35.0%
TTTCCACTGAAGAACCATAT+GGG - chr8.3:20476214-20476233 MS.gene71964:CDS 35.0%
TTTCTTAGCATTTGTGGTGA+TGG - chr8.3:20475933-20475952 MS.gene71964:CDS 35.0%
! AAATTCATGGTGCCAAGAAA+TGG - chr8.3:20475492-20475511 MS.gene71964:CDS 35.0%
! CTTAGTAGGTCCATATTTTC+TGG + chr8.3:20475411-20475430 None:intergenic 35.0%
! TTTTCCACTGAAGAACCATA+TGG - chr8.3:20476213-20476232 MS.gene71964:CDS 35.0%
!! AGTGCTGAAATTTTGTTTGC+AGG - chr8.3:20475637-20475656 MS.gene71964:CDS 35.0%
!!! TTTGTGGTGATGGAGTTTTT+TGG - chr8.3:20475943-20475962 MS.gene71964:CDS 35.0%
AAACCCATATGGTTCTTCAG+TGG + chr8.3:20476220-20476239 None:intergenic 40.0%
ATCCCCAACAACATTGTCTT+GGG + chr8.3:20476112-20476131 None:intergenic 40.0%
ATTGCCCAAGACAATGTTGT+TGG - chr8.3:20476105-20476124 MS.gene71964:intron 40.0%
CAAAAAAGCCAGTCACATAG+AGG - chr8.3:20476050-20476069 MS.gene71964:intron 40.0%
CTTAGACCCAATATCAAGAG+AGG - chr8.3:20475706-20475725 MS.gene71964:CDS 40.0%
GCACAATGCATCCAAATTCA+TGG - chr8.3:20475479-20475498 MS.gene71964:CDS 40.0%
GGCAATAGTTTCTTGTGTAG+TGG + chr8.3:20476091-20476110 None:intergenic 40.0%
TATCCCCAACAACATTGTCT+TGG + chr8.3:20476113-20476132 None:intergenic 40.0%
TTGACCCAATCAAACCCATA+TGG + chr8.3:20476231-20476250 None:intergenic 40.0%
TTGCCCAAGACAATGTTGTT+GGG - chr8.3:20476106-20476125 MS.gene71964:intron 40.0%
TTTGCAGGTTTGAATAGGTG+TGG - chr8.3:20475652-20475671 MS.gene71964:CDS 40.0%
! TAGCTTTTGATCTTCCTCCT+GGG + chr8.3:20475459-20475478 None:intergenic 40.0%
! TCTTGTGTAGTGGAAGTTTC+TGG + chr8.3:20476081-20476100 None:intergenic 40.0%
! TGCAACGGTTTTCCATTTCT+TGG + chr8.3:20475507-20475526 None:intergenic 40.0%
! TGGTTTTTCCTCTATGTGAC+TGG + chr8.3:20476061-20476080 None:intergenic 40.0%
ATAGGTGTGGAAAGAGTTGC+AGG - chr8.3:20475665-20475684 MS.gene71964:CDS 45.0%
GAAAGAGTTGCAGGCTAAGA+TGG - chr8.3:20475674-20475693 MS.gene71964:CDS 45.0%
TGATAGCTGGAAGACTTCCA+GGG - chr8.3:20475983-20476002 MS.gene71964:CDS 45.0%
TGCCCAAGACAATGTTGTTG+GGG - chr8.3:20476107-20476126 MS.gene71964:intron 45.0%
TGTCTGTTGTGTGACCATGT+CGG + chr8.3:20475814-20475833 None:intergenic 45.0%
! TGAAGGTGGTCTTTGATAGC+TGG - chr8.3:20475970-20475989 MS.gene71964:CDS 45.0%
! TTGATAGCTGGAAGACTTCC+AGG - chr8.3:20475982-20476001 MS.gene71964:CDS 45.0%
!! CTAGCTTTTGATCTTCCTCC+TGG + chr8.3:20475460-20475479 None:intergenic 45.0%
!! TACTCTATGAAGCACCGACA+TGG - chr8.3:20475797-20475816 MS.gene71964:intron 45.0%
ATTTCGTTGTCTGTTCGCCC+TGG + chr8.3:20476003-20476022 None:intergenic 50.0%
! GAATAGAGGAGCATGGACCC+AGG - chr8.3:20475439-20475458 MS.gene71964:CDS 55.0%
! TAGAGGAGCATGGACCCAGG+AGG - chr8.3:20475442-20475461 MS.gene71964:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 20475401 20476302 20475401 ID=MS.gene71964
chr8.3 mRNA 20475401 20476302 20475401 ID=MS.gene71964.t1;Parent=MS.gene71964
chr8.3 exon 20476167 20476302 20476167 ID=MS.gene71964.t1.exon1;Parent=MS.gene71964.t1
chr8.3 CDS 20476167 20476302 20476167 ID=cds.MS.gene71964.t1;Parent=MS.gene71964.t1
chr8.3 exon 20475915 20476044 20475915 ID=MS.gene71964.t1.exon2;Parent=MS.gene71964.t1
chr8.3 CDS 20475915 20476044 20475915 ID=cds.MS.gene71964.t1;Parent=MS.gene71964.t1
chr8.3 exon 20475401 20475728 20475401 ID=MS.gene71964.t1.exon3;Parent=MS.gene71964.t1
chr8.3 CDS 20475401 20475728 20475401 ID=cds.MS.gene71964.t1;Parent=MS.gene71964.t1
Gene Sequence

>MS.gene71964

ATGGCACCCAGAAAATATGGACCTACTAAGGAAACAATGAATAGAGGAGCATGGACCCAGGAGGAAGATCAAAAGCTAGCACAATGCATCCAAATTCATGGTGCCAAGAAATGGAAAACCGTTGCAAACAATTCAGGTAATAAGACCAAAGTTATTCTTTTATTACAACTCACAAGTAAAAAACTTACAAGTTTAGAAAAGAAAGGGGGAAAAAGTTGTTACTTGAAACCAAAGCAAGTGCTGAAATTTTGTTTGCAGGTTTGAATAGGTGTGGAAAGAGTTGCAGGCTAAGATGGTTGAACTATCTTAGACCCAATATCAAGAGAGGGAACATTTCAGATGAAGAAGAGGATTTGATTATTAGGCTTCACAAACTTCTTGGAAACAGGTTTCTTATACTCTATGAAGCACCGACATGGTCACACAACAGACACACTTTTAATCTGAAATGTGTGATACATAGGTTATACTCATATATCATATATACAAAATTGTAGTTTTGAAGACAAATAATGTTAATGTATGAGTTAACTTTCTTAGCATTTGTGGTGATGGAGTTTTTTGGTATATGAAGGTGGTCTTTGATAGCTGGAAGACTTCCAGGGCGAACAGACAACGAAATTAAGAACTATTGGAATTCTCATTTGTGCAAAAAAGCCAGTCACATAGAGGAAAAACCAGAAACTTCCACTACACAAGAAACTATTGCCCAAGACAATGTTGTTGGGGATAATGCTATGTTAGAGAATAAAGATTCAATTGGTGGAAGTCTTGATTCAGATGTTATCATTGATGTGAATGAATTCTTAGACTTTTCCACTGAAGAACCATATGGGTTTGATTGGGTCAATAAATTCTTGGAAATTGATCGGTTTCACATTCCTGAGAACAGAAACATCTGA
Protein sequence

>MS.gene71964.t1

MAPRKYGPTKETMNRGAWTQEEDQKLAQCIQIHGAKKWKTVANNSGLNRCGKSCRLRWLNYLRPNIKRGNISDEEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLCKKASHIEEKPETSTTQETIAQDNVVGDNAMLENKDSIGGSLDSDVIIDVNEFLDFSTEEPYGFDWVNKFLEIDRFHIPENRNI