AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene71966

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71966.t1 MTR_4g100720 83.429 175 14 1 1 175 13 172 1.88e-102 292
MS.gene71966.t1 MTR_4g125520 67.521 117 38 0 1 117 12 128 6.63e-54 174
MS.gene71966.t1 MTR_7g117730 66.364 110 37 0 1 110 12 121 2.77e-51 165
MS.gene71966.t1 MTR_8g027345 60.976 123 48 0 1 123 12 134 3.44e-51 166
MS.gene71966.t1 MTR_8g020490 71.154 104 30 0 1 104 8 111 8.72e-51 164
MS.gene71966.t1 MTR_5g079670 68.269 104 33 0 1 104 11 114 7.82e-50 160
MS.gene71966.t1 MTR_0197s0010 61.157 121 47 0 1 121 1 121 1.62e-49 160
MS.gene71966.t1 MTR_3g083540 67.308 104 34 0 1 104 41 144 5.32e-49 161
MS.gene71966.t1 MTR_4g073420 52.174 138 66 0 2 139 13 150 2.04e-48 159
MS.gene71966.t1 MTR_3g097450 58.730 126 46 1 2 121 13 138 7.36e-48 158
MS.gene71966.t1 MTR_2g011660 62.069 116 44 0 1 116 13 128 7.46e-47 156
MS.gene71966.t1 MTR_4g091490 63.158 114 42 0 1 114 13 126 8.93e-47 157
MS.gene71966.t1 MTR_4g485530 66.990 103 34 0 2 104 13 115 1.16e-46 151
MS.gene71966.t1 MTR_0251s0050 62.617 107 40 0 1 107 13 119 8.91e-46 152
MS.gene71966.t1 MTR_7g115650 46.309 149 68 1 1 137 12 160 1.14e-45 149
MS.gene71966.t1 MTR_3g074520 60.526 114 45 0 1 114 12 125 3.10e-45 152
MS.gene71966.t1 MTR_0008s0390 59.664 119 47 1 1 118 13 131 3.55e-45 150
MS.gene71966.t1 MTR_5g079290 64.423 104 37 0 1 104 17 120 5.73e-45 149
MS.gene71966.t1 MTR_5g029840 62.500 112 42 0 3 114 14 125 7.00e-45 151
MS.gene71966.t1 MTR_8g060940 67.327 101 33 0 1 101 7 107 9.76e-45 148
MS.gene71966.t1 MTR_1g100653 62.857 105 39 0 1 105 12 116 1.13e-44 149
MS.gene71966.t1 MTR_7g011170 54.015 137 62 1 1 136 12 148 1.74e-44 149
MS.gene71966.t1 MTR_4g121460 63.462 104 38 0 1 104 12 115 1.91e-44 150
MS.gene71966.t1 MTR_5g078910 62.857 105 39 0 1 105 7 111 3.29e-44 148
MS.gene71966.t1 MTR_0063s0090 50.000 142 58 3 1 129 12 153 6.56e-44 145
MS.gene71966.t1 MTR_0001s0360 63.810 105 38 0 1 105 7 111 7.17e-44 146
MS.gene71966.t1 MTR_4g478180 59.649 114 46 0 1 114 13 126 7.20e-44 149
MS.gene71966.t1 MTR_1g076150 62.500 104 39 0 1 104 12 115 9.02e-44 146
MS.gene71966.t1 MTR_2g089620 58.475 118 49 0 1 118 12 129 9.93e-44 148
MS.gene71966.t1 MTR_5g079220 63.462 104 38 0 1 104 21 124 1.34e-43 146
MS.gene71966.t1 MTR_5g007370 58.772 114 47 0 1 114 12 125 1.48e-43 147
MS.gene71966.t1 MTR_0008s0280 52.344 128 56 1 3 125 14 141 1.56e-43 145
MS.gene71966.t1 MTR_7g017260 55.814 129 54 2 1 127 25 152 2.23e-43 145
MS.gene71966.t1 MTR_1g043050 51.587 126 61 0 1 126 12 137 2.47e-43 145
MS.gene71966.t1 MTR_3g461490 57.018 114 49 0 1 114 12 125 3.05e-43 147
MS.gene71966.t1 MTR_0008s0470 56.303 119 51 1 1 118 13 131 4.09e-43 145
MS.gene71966.t1 MTR_1g085040 48.344 151 75 1 1 151 12 159 7.04e-43 147
MS.gene71966.t1 MTR_4g082290 52.899 138 61 1 1 138 12 145 7.91e-43 147
MS.gene71966.t1 MTR_5g079120 55.469 128 56 1 1 127 61 188 8.30e-43 145
MS.gene71966.t1 MTR_2g097910 52.800 125 59 0 1 125 20 144 1.46e-42 145
MS.gene71966.t1 MTR_0247s0040 64.356 101 36 0 1 101 7 107 1.91e-42 140
MS.gene71966.t1 MTR_2g034790 52.632 133 56 2 1 126 12 144 4.46e-42 144
MS.gene71966.t1 MTR_8g095390 53.333 120 56 0 2 121 13 132 5.28e-42 143
MS.gene71966.t1 MTR_1g043080 58.654 104 43 0 1 104 12 115 5.54e-42 141
MS.gene71966.t1 MTR_0140s0030 53.659 123 57 0 1 123 13 135 6.42e-42 143
MS.gene71966.t1 MTR_0489s0020 53.659 123 57 0 1 123 13 135 6.42e-42 143
MS.gene71966.t1 MTR_4g082230 52.174 138 62 1 1 138 12 145 9.17e-42 145
MS.gene71966.t1 MTR_5g078950 63.366 101 37 0 1 101 7 107 9.91e-42 141
MS.gene71966.t1 MTR_1g112760 61.538 104 40 0 1 104 13 116 1.05e-41 140
MS.gene71966.t1 MTR_7g087130 57.983 119 48 1 1 117 12 130 1.09e-41 143
MS.gene71966.t1 MTR_3g077110 61.538 104 40 0 1 104 12 115 1.76e-41 142
MS.gene71966.t1 MTR_6g012690 58.772 114 47 0 1 114 12 125 1.91e-41 143
MS.gene71966.t1 MTR_5g078800 61.905 105 40 0 1 105 7 111 2.42e-41 140
MS.gene71966.t1 MTR_7g096930 56.034 116 51 0 1 116 12 127 2.51e-41 140
MS.gene71966.t1 MTR_4g105130 61.538 104 40 0 1 104 12 115 3.46e-41 142
MS.gene71966.t1 MTR_3g028740 60.577 104 41 0 1 104 22 125 5.38e-41 141
MS.gene71966.t1 MTR_4g065017 54.167 120 55 0 1 120 17 136 5.48e-41 141
MS.gene71966.t1 MTR_2g089450 45.033 151 80 2 1 151 12 159 5.93e-41 139
MS.gene71966.t1 MTR_7g076740 55.652 115 50 1 1 114 12 126 6.41e-41 140
MS.gene71966.t1 MTR_3g039990 59.091 110 45 0 1 110 13 122 6.99e-41 140
MS.gene71966.t1 MTR_2g064160 59.615 104 42 0 1 104 11 114 7.48e-41 140
MS.gene71966.t1 MTR_7g010210 60.577 104 41 0 1 104 12 115 1.03e-40 140
MS.gene71966.t1 MTR_7g010210 60.577 104 41 0 1 104 12 115 1.05e-40 139
MS.gene71966.t1 MTR_7g110830 62.500 104 39 0 1 104 12 115 1.17e-40 141
MS.gene71966.t1 MTR_5g078860 60.000 105 42 0 1 105 7 111 1.26e-40 139
MS.gene71966.t1 MTR_5g010020 62.626 99 37 0 1 99 12 110 1.89e-40 140
MS.gene71966.t1 MTR_8g098860 60.577 104 41 0 1 104 12 115 2.00e-40 139
MS.gene71966.t1 MTR_6g012180 58.333 120 46 1 1 120 12 127 2.39e-40 139
MS.gene71966.t1 MTR_6g055910 51.493 134 63 1 3 136 16 147 4.68e-40 137
MS.gene71966.t1 MTR_1g085640 60.577 104 41 0 1 104 12 115 5.43e-40 140
MS.gene71966.t1 MTR_8g017540 44.311 167 83 3 1 162 58 219 7.65e-40 139
MS.gene71966.t1 MTR_1g045610 54.867 113 51 0 3 115 23 135 9.36e-40 136
MS.gene71966.t1 MTR_1g086530 56.881 109 47 0 1 109 33 141 1.20e-39 136
MS.gene71966.t1 MTR_4g102380 57.018 114 49 0 1 114 12 125 2.08e-39 135
MS.gene71966.t1 MTR_5g078140 44.311 167 83 3 1 161 12 174 2.37e-39 136
MS.gene71966.t1 MTR_4g063100 55.238 105 47 0 3 107 9 113 2.44e-39 134
MS.gene71966.t1 MTR_2g089420 46.259 147 73 2 1 146 11 152 2.46e-39 139
MS.gene71966.t1 MTR_3g065440 56.140 114 50 0 1 114 12 125 3.77e-39 135
MS.gene71966.t1 MTR_8g017440 57.692 104 44 0 1 104 12 115 4.23e-39 136
MS.gene71966.t1 MTR_6g009430 48.551 138 69 1 1 138 12 147 5.24e-39 136
MS.gene71966.t1 MTR_2g067420 59.000 100 41 0 1 100 14 113 5.47e-39 135
MS.gene71966.t1 MTR_1g086510 56.881 109 47 0 1 109 21 129 6.57e-39 134
MS.gene71966.t1 MTR_8g031360 54.783 115 51 1 1 114 13 127 9.28e-39 134
MS.gene71966.t1 MTR_5g078930 51.163 129 62 1 5 132 13 141 1.10e-38 132
MS.gene71966.t1 MTR_2g096380 44.444 153 83 1 1 153 6 156 1.42e-38 132
MS.gene71966.t1 MTR_0193s0090 59.223 103 42 0 1 103 7 109 1.44e-38 131
MS.gene71966.t1 MTR_2g099740 58.654 104 43 0 1 104 12 115 1.63e-38 136
MS.gene71966.t1 MTR_7g035075 56.303 119 48 2 1 119 14 128 1.74e-38 131
MS.gene71966.t1 MTR_1g110460 56.481 108 47 0 1 108 26 133 1.79e-38 134
MS.gene71966.t1 MTR_4g057635 59.048 105 42 1 1 104 12 116 1.80e-38 134
MS.gene71966.t1 MTR_1g073170 56.863 102 44 0 3 104 22 123 2.85e-38 132
MS.gene71966.t1 MTR_7g111290 62.245 98 37 0 1 98 12 109 3.05e-38 135
MS.gene71966.t1 MTR_1g100667 56.481 108 47 0 3 110 15 122 3.78e-38 132
MS.gene71966.t1 MTR_3g103570 59.048 105 42 1 1 104 12 116 5.43e-38 134
MS.gene71966.t1 MTR_1g062940 56.190 105 46 0 1 105 6 110 7.01e-38 130
MS.gene71966.t1 MTR_8g017390 58.095 105 43 1 1 104 12 116 9.26e-38 135
MS.gene71966.t1 MTR_8g017500 56.731 104 45 0 1 104 12 115 9.71e-38 133
MS.gene71966.t1 MTR_8g017340 59.048 105 42 1 1 104 12 116 2.15e-37 134
MS.gene71966.t1 MTR_7g109320 58.974 117 45 1 1 117 12 125 2.71e-37 132
MS.gene71966.t1 MTR_7g102110 50.820 122 59 1 1 121 12 133 4.84e-37 129
MS.gene71966.t1 MTR_6g006030 49.587 121 61 0 1 121 14 134 1.02e-36 127
MS.gene71966.t1 MTR_5g042030 51.754 114 55 0 1 114 7 120 1.02e-36 129
MS.gene71966.t1 MTR_2g095520 59.184 98 39 1 3 99 14 111 1.13e-36 129
MS.gene71966.t1 MTR_6g090405 51.639 122 56 2 1 121 12 131 1.15e-36 128
MS.gene71966.t1 MTR_8g017350 58.095 105 43 1 1 104 12 116 1.61e-36 134
MS.gene71966.t1 MTR_3g052430 54.808 104 47 0 1 104 41 144 1.70e-36 133
MS.gene71966.t1 MTR_5g014990 57.143 105 44 1 1 104 12 116 2.17e-36 129
MS.gene71966.t1 MTR_1g017140 56.190 105 45 1 1 104 12 116 2.48e-36 129
MS.gene71966.t1 MTR_4g097570 50.000 128 63 1 1 127 12 139 2.60e-36 128
MS.gene71966.t1 MTR_1g017000 52.381 105 49 1 1 104 12 116 3.38e-36 126
MS.gene71966.t1 MTR_3g052450 49.194 124 56 1 1 117 40 163 4.41e-36 131
MS.gene71966.t1 MTR_3g011610 55.556 99 44 0 1 99 37 135 2.06e-35 129
MS.gene71966.t1 MTR_4g097570 49.612 129 63 2 1 127 12 140 1.17e-34 124
MS.gene71966.t1 MTR_2g033170 56.881 109 47 0 1 109 24 132 7.91e-34 122
MS.gene71966.t1 MTR_8g042410 51.923 104 50 0 1 104 37 140 9.87e-34 125
MS.gene71966.t1 MTR_1g021230 46.094 128 66 2 1 126 57 183 1.07e-33 124
MS.gene71966.t1 MTR_4g123040 56.881 109 47 0 1 109 24 132 1.32e-33 121
MS.gene71966.t1 MTR_4g128670 55.102 98 43 1 3 99 14 111 8.42e-33 120
MS.gene71966.t1 MTR_2g088170 55.769 104 46 0 1 104 29 132 3.72e-32 120
MS.gene71966.t1 MTR_6g055910 55.340 103 44 1 34 136 18 118 1.70e-31 114
MS.gene71966.t1 MTR_5g062790 48.980 98 49 1 3 99 11 108 7.41e-31 114
MS.gene71966.t1 MTR_7g111290 75.758 66 16 0 33 98 2 67 1.57e-30 114
MS.gene71966.t1 MTR_5g088080 46.939 98 51 1 3 99 14 111 4.55e-30 111
MS.gene71966.t1 MTR_5g088150 46.939 98 51 1 3 99 14 111 4.55e-30 111
MS.gene71966.t1 MTR_5g488210 46.939 98 51 1 3 99 14 111 4.55e-30 111
MS.gene71966.t1 MTR_5g088640 46.939 98 51 1 3 99 14 111 6.31e-30 111
MS.gene71966.t1 MTR_5g488170 46.939 98 51 1 3 99 14 111 6.31e-30 110
MS.gene71966.t1 MTR_1g083630 51.020 98 48 0 1 98 12 109 1.08e-29 114
MS.gene71966.t1 MTR_5g007300 59.740 77 31 0 1 77 64 140 3.75e-29 105
MS.gene71966.t1 MTR_3g463400 44.094 127 67 3 3 126 133 258 7.74e-29 111
MS.gene71966.t1 MTR_5g088610 48.980 98 49 1 3 99 11 108 7.79e-29 109
MS.gene71966.t1 MTR_4g063100 64.789 71 25 0 34 104 11 81 8.10e-29 107
MS.gene71966.t1 MTR_2g096380 65.278 72 25 0 34 105 20 91 8.78e-29 106
MS.gene71966.t1 MTR_5g016510 38.776 147 87 3 3 147 5 150 1.94e-28 108
MS.gene71966.t1 MTR_3g045430 43.860 114 64 0 1 114 13 126 2.59e-28 107
MS.gene71966.t1 MTR_8g006470 46.000 100 53 1 1 99 10 109 3.88e-28 106
MS.gene71966.t1 MTR_4g029540 40.000 120 71 1 1 119 10 129 3.56e-27 104
MS.gene71966.t1 MTR_3g077650 42.975 121 66 2 3 123 181 298 5.23e-27 106
MS.gene71966.t1 MTR_4g019370 46.602 103 54 1 3 105 38 139 7.19e-27 104
MS.gene71966.t1 MTR_6g015455 46.226 106 56 1 3 108 5 109 1.67e-26 105
MS.gene71966.t1 MTR_5g070020 47.423 97 50 1 3 99 122 217 1.74e-26 103
MS.gene71966.t1 MTR_6g074860 44.118 102 56 1 2 103 3 103 1.84e-26 101
MS.gene71966.t1 MTR_3g101290 45.631 103 55 1 3 105 37 138 1.93e-26 100
MS.gene71966.t1 MTR_7g061330 37.342 158 89 2 3 160 77 224 2.39e-26 105
MS.gene71966.t1 MTR_6g027340 47.423 97 50 1 2 98 15 110 3.25e-26 99.8
MS.gene71966.t1 MTR_7g061330 37.342 158 89 2 3 160 113 260 3.34e-26 104
MS.gene71966.t1 MTR_7g461410 37.342 158 89 2 3 160 113 260 3.34e-26 104
MS.gene71966.t1 MTR_4g094982 44.340 106 58 1 3 108 5 109 3.43e-26 101
MS.gene71966.t1 MTR_4g082040 44.118 102 56 1 3 104 105 205 5.93e-26 103
MS.gene71966.t1 MTR_5g049190 41.129 124 72 1 3 126 19 141 7.30e-26 99.8
MS.gene71966.t1 MTR_4g105660 48.454 97 49 1 3 99 180 275 1.16e-25 102
MS.gene71966.t1 MTR_6g027360 46.602 103 52 2 1 103 76 175 2.63e-25 99.8
MS.gene71966.t1 MTR_4g128190 42.735 117 50 3 1 113 11 114 2.87e-25 98.2
MS.gene71966.t1 MTR_5g041570 42.157 102 58 1 3 104 134 234 7.03e-25 100
MS.gene71966.t1 MTR_5g082910 43.434 99 55 1 3 101 19 116 1.72e-24 97.1
MS.gene71966.t1 MTR_7g035350 45.794 107 55 2 6 112 228 331 1.86e-24 99.4
MS.gene71966.t1 MTR_3g110028 45.098 102 55 1 3 104 85 185 3.43e-24 99.0
MS.gene71966.t1 MTR_7g037260 45.361 97 52 1 3 99 145 240 5.90e-24 96.7
MS.gene71966.t1 MTR_7g451170 45.361 97 52 1 3 99 191 286 7.80e-24 97.1
MS.gene71966.t1 MTR_4g088015 45.361 97 52 1 3 99 221 316 9.73e-24 97.1
MS.gene71966.t1 MTR_1g057980 47.423 97 50 1 3 99 80 175 1.05e-23 95.1
MS.gene71966.t1 MTR_1g026870 45.098 102 55 1 3 104 85 185 1.43e-23 97.4
MS.gene71966.t1 MTR_3g089045 38.400 125 76 1 3 127 16 139 3.29e-23 94.0
MS.gene71966.t1 MTR_0023s0210 53.247 77 36 0 1 77 7 83 3.87e-23 88.2
MS.gene71966.t1 MTR_1g085880 45.631 103 55 1 6 107 17 119 1.06e-22 90.5
MS.gene71966.t1 MTR_1g085770 45.631 103 55 1 6 107 17 119 3.43e-22 91.3
MS.gene71966.t1 MTR_5g010650 45.745 94 50 1 5 98 112 204 6.53e-22 92.0
MS.gene71966.t1 MTR_7g450950 42.268 97 55 1 3 99 157 252 1.17e-21 90.5
MS.gene71966.t1 MTR_7g086960 32.927 164 103 3 2 161 88 248 3.28e-21 89.4
MS.gene71966.t1 MTR_6g027370 38.806 134 75 3 3 132 99 229 5.19e-21 88.6
MS.gene71966.t1 MTR_7g061550 40.816 98 56 1 2 97 6 103 4.00e-20 86.3
MS.gene71966.t1 MTR_7g037130 40.385 104 60 2 3 105 145 247 1.78e-19 84.7
MS.gene71966.t1 MTR_5g038910 42.857 105 58 2 5 109 28 130 3.17e-19 84.3
MS.gene71966.t1 MTR_5g038910 42.857 105 58 2 5 109 28 130 3.56e-19 84.3
MS.gene71966.t1 MTR_8g468380 40.000 95 56 1 5 99 24 117 8.43e-17 77.4
MS.gene71966.t1 MTR_2g088730 73.171 41 11 0 59 99 34 74 1.41e-15 68.6
MS.gene71966.t1 MTR_6g055910 48.718 78 38 1 59 136 2 77 1.88e-15 71.6
MS.gene71966.t1 MTR_4g063100 60.870 46 18 0 59 104 1 46 2.84e-13 65.5
MS.gene71966.t1 MTR_2g096380 59.574 47 19 0 59 105 1 47 9.86e-13 63.5
MS.gene71966.t1 MTR_4g046737 63.415 41 15 0 59 99 28 68 1.42e-12 60.5
MS.gene71966.t1 MTR_2g023100 45.833 48 26 0 59 106 29 76 1.63e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71966.t1 AT5G35550 62.992 127 47 0 1 127 14 140 9.68e-51 164
MS.gene71966.t1 AT5G14750 47.929 169 71 2 3 154 18 186 8.62e-50 160
MS.gene71966.t1 AT5G40330 53.103 145 54 2 3 133 14 158 5.26e-49 158
MS.gene71966.t1 AT1G22640 67.308 104 34 0 1 104 12 115 5.71e-49 159
MS.gene71966.t1 AT3G13540 63.158 114 42 0 1 114 23 136 1.02e-48 159
MS.gene71966.t1 AT1G35515 44.503 191 83 3 1 175 12 195 1.72e-48 157
MS.gene71966.t1 AT4G38620 66.019 103 35 0 2 104 13 115 2.76e-48 159
MS.gene71966.t1 AT4G09460 61.947 113 43 0 2 114 13 125 2.80e-48 157
MS.gene71966.t1 AT5G52600 58.268 127 53 0 1 127 12 138 3.69e-48 155
MS.gene71966.t1 AT2G47460 53.571 140 65 0 1 140 12 151 1.45e-47 159
MS.gene71966.t1 AT5G16770 64.035 114 41 0 1 114 12 125 1.56e-47 158
MS.gene71966.t1 AT5G16770 64.035 114 41 0 1 114 12 125 1.56e-47 158
MS.gene71966.t1 AT4G05100 61.207 116 45 0 1 116 13 128 2.38e-47 157
MS.gene71966.t1 AT5G16770 64.035 114 41 0 1 114 12 125 2.60e-47 157
MS.gene71966.t1 AT5G16770 64.035 114 41 0 1 114 12 125 2.60e-47 157
MS.gene71966.t1 AT2G16720 64.423 104 37 0 1 104 12 115 3.76e-47 155
MS.gene71966.t1 AT4G34990 58.915 129 40 3 2 120 13 138 4.39e-47 155
MS.gene71966.t1 AT4G21440 61.207 116 45 0 1 116 12 127 4.47e-47 157
MS.gene71966.t1 AT5G54230 62.281 114 43 0 1 114 12 125 7.74e-47 156
MS.gene71966.t1 AT4G28110 63.462 104 38 0 1 104 12 115 1.22e-46 154
MS.gene71966.t1 AT3G02940 62.281 114 43 0 1 114 12 125 3.46e-46 154
MS.gene71966.t1 AT3G02940 62.281 114 43 0 1 114 12 125 4.88e-46 154
MS.gene71966.t1 AT3G02940 62.281 114 43 0 1 114 12 125 4.88e-46 154
MS.gene71966.t1 AT3G27920 63.725 102 37 0 3 104 16 117 6.75e-46 150
MS.gene71966.t1 AT1G66370 66.346 104 35 0 1 104 8 111 7.39e-46 151
MS.gene71966.t1 AT3G62610 58.824 119 49 0 1 119 12 130 2.00e-45 153
MS.gene71966.t1 AT3G23250 59.483 116 46 1 1 115 12 127 1.23e-44 149
MS.gene71966.t1 AT5G12870 60.909 110 43 0 1 110 18 127 2.82e-44 148
MS.gene71966.t1 AT5G10280 57.018 114 49 0 1 114 12 125 3.54e-44 149
MS.gene71966.t1 AT4G12350 46.667 165 75 1 1 152 12 176 6.55e-44 147
MS.gene71966.t1 AT5G49330 63.462 104 38 0 1 104 12 115 1.03e-43 148
MS.gene71966.t1 AT5G60890 56.911 123 48 1 1 118 12 134 1.04e-43 147
MS.gene71966.t1 AT5G56110 57.895 114 48 0 1 114 12 125 1.05e-43 148
MS.gene71966.t1 AT5G65230 57.895 114 48 0 1 114 12 125 2.40e-43 147
MS.gene71966.t1 AT4G17785 58.772 114 47 0 1 114 13 126 2.74e-43 147
MS.gene71966.t1 AT4G17785 58.772 114 47 0 1 114 13 126 3.15e-43 147
MS.gene71966.t1 AT1G06180 57.658 111 47 0 1 111 12 122 4.85e-43 144
MS.gene71966.t1 AT1G57560 46.471 170 74 3 1 161 12 173 5.52e-43 145
MS.gene71966.t1 AT5G15310 62.500 104 39 0 1 104 12 115 9.64e-43 145
MS.gene71966.t1 AT5G15310 62.500 104 39 0 1 104 12 115 1.13e-42 145
MS.gene71966.t1 AT5G15310 62.500 104 39 0 1 104 12 115 1.19e-42 143
MS.gene71966.t1 AT2G47190 53.719 121 56 0 1 121 20 140 2.27e-42 143
MS.gene71966.t1 AT1G74080 62.136 103 39 0 1 103 12 114 2.68e-42 144
MS.gene71966.t1 AT2G31180 60.377 106 42 0 1 106 12 117 4.17e-42 142
MS.gene71966.t1 AT3G01140 53.788 132 60 1 1 131 12 143 4.86e-42 144
MS.gene71966.t1 AT3G30210 45.570 158 69 1 3 143 29 186 5.55e-42 142
MS.gene71966.t1 AT3G01140 53.788 132 60 1 1 131 55 186 9.11e-42 144
MS.gene71966.t1 AT5G61420 50.355 141 64 2 1 136 12 151 1.01e-41 144
MS.gene71966.t1 AT1G16490 58.491 106 44 0 1 106 14 119 1.28e-41 141
MS.gene71966.t1 AT1G63910 55.118 127 54 1 1 124 12 138 3.27e-41 142
MS.gene71966.t1 AT1G18570 61.538 104 40 0 1 104 13 116 3.64e-41 142
MS.gene71966.t1 AT1G57560 61.538 104 40 0 1 104 12 115 4.00e-41 140
MS.gene71966.t1 AT1G09540 62.500 104 39 0 1 104 12 115 5.52e-41 142
MS.gene71966.t1 AT1G34670 57.895 114 48 0 1 114 12 125 6.21e-41 142
MS.gene71966.t1 AT1G79180 50.794 126 59 1 1 123 14 139 6.57e-41 140
MS.gene71966.t1 AT5G07700 59.615 104 42 0 1 104 12 115 8.72e-41 140
MS.gene71966.t1 AT5G07700 59.615 104 42 0 1 104 12 115 8.72e-41 140
MS.gene71966.t1 AT3G12720 56.731 104 45 0 1 104 22 125 8.73e-41 140
MS.gene71966.t1 AT3G61250 55.263 114 51 0 1 114 12 125 9.36e-41 139
MS.gene71966.t1 AT5G26660 63.462 104 38 0 1 104 12 115 1.03e-40 141
MS.gene71966.t1 AT5G62470 57.522 113 48 0 1 113 12 124 1.20e-40 140
MS.gene71966.t1 AT1G66380 68.269 104 33 0 1 104 8 111 1.20e-40 134
MS.gene71966.t1 AT5G07690 61.165 103 40 0 1 103 12 114 1.21e-40 140
MS.gene71966.t1 AT3G08500 60.577 104 41 0 1 104 30 133 1.21e-40 140
MS.gene71966.t1 AT4G01680 61.538 104 40 0 1 104 12 115 1.48e-40 137
MS.gene71966.t1 AT1G74650 61.538 104 40 0 1 104 12 115 1.95e-40 139
MS.gene71966.t1 AT1G56160 58.491 106 44 0 1 106 14 119 2.17e-40 139
MS.gene71966.t1 AT1G56650 67.308 104 34 0 1 104 8 111 2.79e-40 137
MS.gene71966.t1 AT1G66230 52.800 125 59 0 1 125 12 136 3.78e-40 137
MS.gene71966.t1 AT3G28910 57.273 110 47 0 1 110 12 121 3.89e-40 139
MS.gene71966.t1 AT3G47600 59.615 104 42 0 1 104 12 115 5.00e-40 139
MS.gene71966.t1 AT1G48000 52.893 121 57 0 1 121 32 152 6.18e-40 136
MS.gene71966.t1 AT4G01680 61.538 104 40 0 1 104 12 115 7.03e-40 138
MS.gene71966.t1 AT3G53200 58.654 104 43 0 1 104 9 112 7.18e-40 135
MS.gene71966.t1 AT1G08810 60.577 104 41 0 1 104 12 115 7.47e-40 137
MS.gene71966.t1 AT3G13890 58.654 104 43 0 1 104 12 115 8.16e-40 139
MS.gene71966.t1 AT1G74430 51.639 122 54 1 1 117 12 133 2.35e-39 135
MS.gene71966.t1 AT4G13480 53.846 117 49 1 3 119 8 119 2.81e-39 135
MS.gene71966.t1 AT5G14750 50.370 135 50 2 37 154 18 152 3.68e-39 132
MS.gene71966.t1 AT1G66390 67.308 104 34 0 1 104 8 111 3.71e-39 134
MS.gene71966.t1 AT5G62470 57.522 113 47 1 1 113 12 123 4.78e-39 136
MS.gene71966.t1 AT5G59780 53.509 114 52 1 3 116 10 122 7.19e-39 133
MS.gene71966.t1 AT3G24310 59.223 103 42 0 3 105 20 122 7.93e-39 134
MS.gene71966.t1 AT4G22680 56.140 114 50 0 1 114 12 125 8.47e-39 134
MS.gene71966.t1 AT3G01530 61.386 101 39 0 1 101 25 125 1.17e-38 131
MS.gene71966.t1 AT5G14340 52.033 123 59 0 1 123 24 146 2.14e-38 133
MS.gene71966.t1 AT5G35550 65.657 99 34 0 28 126 44 142 2.19e-38 132
MS.gene71966.t1 AT3G12820 56.731 104 45 0 1 104 14 117 2.82e-38 131
MS.gene71966.t1 AT1G18710 53.509 114 53 0 1 114 12 125 3.08e-38 132
MS.gene71966.t1 AT3G46130 53.913 115 51 1 3 117 11 123 3.52e-38 132
MS.gene71966.t1 AT5G16600 56.140 114 50 0 1 114 12 125 1.19e-37 132
MS.gene71966.t1 AT3G27810 40.719 167 88 2 3 169 22 177 1.43e-37 129
MS.gene71966.t1 AT3G28470 54.545 99 45 0 1 99 12 110 1.96e-37 131
MS.gene71966.t1 AT4G25560 60.784 102 40 0 3 104 12 113 4.86e-37 129
MS.gene71966.t1 AT2G26960 56.436 101 44 0 1 101 20 120 5.91e-37 132
MS.gene71966.t1 AT3G13890 53.982 113 43 1 1 104 12 124 1.03e-36 130
MS.gene71966.t1 AT5G40350 54.386 114 49 1 3 116 19 129 1.18e-36 127
MS.gene71966.t1 AT4G01680 55.172 116 40 1 1 104 12 127 1.77e-36 130
MS.gene71966.t1 AT5G55020 56.436 101 44 0 1 101 26 126 1.78e-36 132
MS.gene71966.t1 AT2G32460 53.846 104 48 0 1 104 6 109 2.65e-36 131
MS.gene71966.t1 AT2G32460 53.846 104 48 0 1 104 18 121 2.73e-36 132
MS.gene71966.t1 AT1G68320 55.556 108 48 0 1 108 19 126 5.13e-36 127
MS.gene71966.t1 AT3G49690 57.143 105 44 1 1 104 12 116 5.55e-36 127
MS.gene71966.t1 AT5G06100 40.000 175 95 4 1 169 32 202 5.86e-36 130
MS.gene71966.t1 AT5G23000 57.143 105 44 1 1 104 12 116 6.50e-36 128
MS.gene71966.t1 AT4G26930 54.455 101 46 0 1 101 19 119 9.66e-36 129
MS.gene71966.t1 AT1G25340 54.717 106 48 0 3 108 20 125 1.52e-35 125
MS.gene71966.t1 AT4G37780 54.286 105 47 1 1 104 12 116 1.61e-35 126
MS.gene71966.t1 AT5G06100 40.000 175 95 4 1 169 32 202 1.86e-35 130
MS.gene71966.t1 AT5G06100 40.000 175 95 4 1 169 32 202 1.86e-35 130
MS.gene71966.t1 AT5G06100 40.000 175 95 4 1 169 32 202 1.86e-35 130
MS.gene71966.t1 AT5G06100 40.000 175 95 4 1 169 32 202 1.86e-35 130
MS.gene71966.t1 AT5G62320 39.444 180 94 5 1 165 13 192 2.01e-35 124
MS.gene71966.t1 AT5G65790 56.190 105 45 1 1 104 12 116 3.32e-35 127
MS.gene71966.t1 AT5G57620 56.190 105 45 1 1 104 12 116 4.17e-35 125
MS.gene71966.t1 AT5G52260 60.784 102 40 0 3 104 14 115 8.04e-35 123
MS.gene71966.t1 AT1G79180 40.252 159 59 2 1 123 14 172 1.52e-34 124
MS.gene71966.t1 AT3G11440 50.962 104 51 0 1 104 41 144 2.46e-34 126
MS.gene71966.t1 AT2G36890 54.286 105 47 1 1 104 12 116 3.71e-34 122
MS.gene71966.t1 AT3G11440 50.962 104 51 0 1 104 41 144 5.77e-34 126
MS.gene71966.t1 AT3G11440 50.962 104 51 0 1 104 41 144 5.77e-34 126
MS.gene71966.t1 AT3G11440 50.962 104 51 0 1 104 41 144 5.77e-34 126
MS.gene71966.t1 AT2G36890 54.286 105 47 1 1 104 53 157 6.29e-34 123
MS.gene71966.t1 AT3G48920 45.161 124 67 1 3 126 20 142 1.40e-33 120
MS.gene71966.t1 AT3G06490 55.963 109 48 0 1 109 19 127 2.92e-33 120
MS.gene71966.t1 AT5G26660 76.056 71 17 0 34 104 14 84 9.08e-33 119
MS.gene71966.t1 AT5G49620 57.009 107 46 0 3 109 28 134 3.01e-32 117
MS.gene71966.t1 AT1G25340 51.887 106 46 1 3 108 20 120 5.75e-31 114
MS.gene71966.t1 AT1G25340 51.887 106 46 1 3 108 20 120 9.51e-31 114
MS.gene71966.t1 AT3G46130 59.341 91 35 1 27 117 3 91 1.21e-30 111
MS.gene71966.t1 AT3G12820 70.588 68 20 0 37 104 2 69 4.01e-30 109
MS.gene71966.t1 AT5G14750 52.475 101 34 1 47 133 1 101 5.74e-30 107
MS.gene71966.t1 AT5G14750 52.475 101 34 1 47 133 1 101 5.74e-30 107
MS.gene71966.t1 AT1G66380 78.873 71 15 0 34 104 8 78 9.47e-30 105
MS.gene71966.t1 AT3G53200 69.014 71 22 0 34 104 9 79 1.04e-29 108
MS.gene71966.t1 AT5G59780 60.241 83 32 1 34 116 20 101 1.12e-29 108
MS.gene71966.t1 AT3G27810 41.176 136 69 2 34 169 4 128 1.21e-29 107
MS.gene71966.t1 AT3G46130 61.905 84 30 1 34 117 20 101 1.75e-29 108
MS.gene71966.t1 AT3G47600 69.014 71 22 0 34 104 39 109 1.88e-29 110
MS.gene71966.t1 AT5G40350 60.000 85 31 1 32 116 3 84 1.76e-28 104
MS.gene71966.t1 AT5G49620 50.413 121 46 1 3 109 28 148 1.87e-28 108
MS.gene71966.t1 AT3G27785 50.515 97 47 1 3 99 189 284 6.71e-28 108
MS.gene71966.t1 AT2G26950 44.444 99 55 0 1 99 16 114 8.62e-28 107
MS.gene71966.t1 AT2G39880 42.975 121 68 1 3 123 50 169 4.89e-27 105
MS.gene71966.t1 AT1G17950 32.768 177 103 5 2 177 4 165 5.28e-27 102
MS.gene71966.t1 AT3G60460 46.000 100 53 1 1 99 11 110 7.13e-27 103
MS.gene71966.t1 AT4G18770 41.935 124 69 2 3 126 217 337 8.13e-27 105
MS.gene71966.t1 AT1G22640 74.138 58 15 0 47 104 1 58 9.05e-27 101
MS.gene71966.t1 AT5G40360 45.455 99 53 1 1 99 156 253 2.32e-26 103
MS.gene71966.t1 AT5G11510 39.583 144 72 2 3 132 81 223 2.54e-26 105
MS.gene71966.t1 AT5G11510 39.583 144 72 2 3 132 81 223 2.54e-26 105
MS.gene71966.t1 AT5G11510 39.583 144 72 2 3 132 81 223 2.54e-26 105
MS.gene71966.t1 AT5G11510 39.583 144 72 2 3 132 81 223 2.82e-26 105
MS.gene71966.t1 AT5G11510 39.583 144 72 2 3 132 81 223 2.91e-26 105
MS.gene71966.t1 AT1G26780 43.269 104 58 1 1 104 96 198 3.10e-26 101
MS.gene71966.t1 AT1G69560 42.308 104 59 1 1 104 105 207 3.80e-26 102
MS.gene71966.t1 AT1G69560 42.308 104 59 1 1 104 121 223 4.09e-26 102
MS.gene71966.t1 AT1G26780 43.269 104 58 1 1 104 96 198 5.23e-26 102
MS.gene71966.t1 AT5G02320 48.039 102 52 1 3 104 67 167 5.24e-26 103
MS.gene71966.t1 AT5G02320 48.039 102 52 1 3 104 127 227 5.44e-26 103
MS.gene71966.t1 AT5G02320 48.039 102 52 1 3 104 127 227 5.44e-26 103
MS.gene71966.t1 AT3G09230 47.059 102 53 1 3 104 55 155 1.42e-25 101
MS.gene71966.t1 AT3G09370 36.943 157 94 3 3 156 130 284 1.56e-25 102
MS.gene71966.t1 AT3G09370 36.943 157 94 3 3 156 135 289 1.71e-25 102
MS.gene71966.t1 AT3G09370 36.943 157 94 3 3 156 143 297 1.80e-25 102
MS.gene71966.t1 AT4G37260 47.115 104 54 1 3 106 13 115 2.15e-25 100
MS.gene71966.t1 AT5G58850 42.857 112 63 1 3 114 105 215 3.87e-25 100
MS.gene71966.t1 AT3G55730 46.226 106 56 1 3 108 56 160 4.43e-25 100
MS.gene71966.t1 AT3G50060 35.976 164 92 4 3 166 6 156 5.92e-25 98.6
MS.gene71966.t1 AT3G23250 62.857 70 25 1 47 115 1 70 6.81e-25 97.1
MS.gene71966.t1 AT2G23290 47.115 104 54 1 3 106 13 115 9.28e-25 98.2
MS.gene71966.t1 AT5G67300 46.078 102 54 1 3 104 6 106 1.05e-24 98.2
MS.gene71966.t1 AT4G33450 39.831 118 70 1 3 120 19 135 1.32e-24 96.7
MS.gene71966.t1 AT1G71030 53.750 80 36 1 25 104 5 83 4.24e-24 94.0
MS.gene71966.t1 AT5G11050 45.361 97 52 1 3 99 105 200 5.22e-24 97.8
MS.gene71966.t1 AT1G71030 63.077 65 24 0 40 104 5 69 5.30e-24 93.6
MS.gene71966.t1 AT3G29020 41.748 103 59 1 2 104 64 165 5.53e-24 94.7
MS.gene71966.t1 AT3G29020 41.748 103 59 1 2 104 66 167 5.67e-24 96.3
MS.gene71966.t1 AT1G66380 61.728 81 31 0 1 81 8 88 6.07e-24 91.3
MS.gene71966.t1 AT2G25230 47.872 94 48 1 6 99 29 121 9.58e-24 94.0
MS.gene71966.t1 AT4G32730 43.137 102 57 1 3 104 87 187 6.25e-23 95.5
MS.gene71966.t1 AT4G32730 43.137 102 57 1 3 104 87 187 6.25e-23 95.5
MS.gene71966.t1 AT4G32730 43.137 102 57 1 3 104 87 187 6.25e-23 95.5
MS.gene71966.t1 AT4G32730 43.137 102 57 1 3 104 87 187 6.25e-23 95.5
MS.gene71966.t1 AT4G32730 43.137 102 57 1 3 104 87 187 6.30e-23 95.5
MS.gene71966.t1 AT1G73410 32.402 179 109 5 2 177 5 174 7.26e-23 90.9
MS.gene71966.t1 AT1G73410 32.402 179 109 4 2 177 5 174 7.71e-23 92.0
MS.gene71966.t1 AT5G17800 40.385 104 61 1 2 105 92 194 1.36e-22 92.8
MS.gene71966.t1 AT1G18960 37.931 116 64 3 2 112 9 121 2.14e-20 86.7
MS.gene71966.t1 AT5G40430 40.404 99 57 2 1 99 52 148 2.25e-20 85.5
MS.gene71966.t1 AT5G39700 42.708 96 54 1 4 99 57 151 3.19e-20 84.0
MS.gene71966.t1 AT1G14350 33.962 159 100 4 5 161 27 182 3.33e-20 87.4
MS.gene71966.t1 AT1G14350 33.962 159 100 4 5 161 27 182 3.33e-20 87.4
MS.gene71966.t1 AT2G37630 40.541 111 62 2 3 111 4 112 9.60e-20 85.5
MS.gene71966.t1 AT2G02820 32.653 147 82 3 5 146 32 166 5.51e-18 80.5
MS.gene71966.t1 AT2G02820 32.653 147 82 3 5 146 32 166 8.43e-18 80.5
MS.gene71966.t1 AT2G02820 32.653 147 82 3 5 146 32 166 9.43e-18 80.5
MS.gene71966.t1 AT4G00540 35.652 115 67 3 1 112 101 211 2.71e-16 75.9
MS.gene71966.t1 AT4G00540 35.652 115 67 3 1 112 99 209 3.31e-16 75.9
MS.gene71966.t1 AT4G25560 69.565 46 14 0 59 104 2 47 9.76e-15 69.7
MS.gene71966.t1 AT5G59780 53.448 58 26 1 59 116 1 57 4.80e-14 67.0
MS.gene71966.t1 AT4G01060 65.000 40 14 0 58 97 34 73 6.02e-14 64.3
MS.gene71966.t1 AT4G01060 65.000 40 14 0 58 97 31 70 6.27e-14 64.3
MS.gene71966.t1 AT4G01060 65.000 40 14 0 58 97 32 71 8.30e-14 63.9
MS.gene71966.t1 AT3G46130 61.702 47 18 0 59 105 1 47 9.07e-14 66.6
MS.gene71966.t1 AT2G46410 65.000 40 14 0 58 97 37 76 1.74e-13 63.5
MS.gene71966.t1 AT2G30424 50.000 50 25 0 58 107 35 84 4.44e-12 60.1
MS.gene71966.t1 AT5G53200 57.500 40 17 0 58 97 32 71 4.56e-12 60.1
MS.gene71966.t1 AT1G01380 61.538 39 15 0 59 97 34 72 5.95e-12 59.3
MS.gene71966.t1 AT1G74650 69.231 39 12 0 66 104 1 39 6.97e-12 62.8
MS.gene71966.t1 AT1G14350 34.454 119 74 3 45 161 23 139 8.36e-12 63.2
MS.gene71966.t1 AT1G14350 34.454 119 74 3 45 161 23 139 8.36e-12 63.2
MS.gene71966.t1 AT3G28910 57.778 45 19 0 66 110 1 45 9.45e-12 62.0
MS.gene71966.t1 AT2G30420 42.188 64 33 1 58 117 39 102 2.95e-11 58.2

Find 44 sgRNAs with CRISPR-Local

Find 61 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTGTGTAGTGGAAGTTTC+TGG 0.164235 8.3:+20544165 None:intergenic
ATTTCTTGGCACCATGAATT+TGG 0.171949 8.3:+20544753 None:intergenic
ATTAGGCTTCACAAACTTCT+TGG 0.284141 8.3:-20544483 MS.gene71966:CDS
AAGAAGAGGATTTGATTATT+AGG 0.284473 8.3:-20544500 MS.gene71966:CDS
TTGATAGCTGGAAGACTTCC+AGG 0.301289 8.3:-20544261 MS.gene71966:CDS
ATGTTCCCTCTCTTGATATT+GGG 0.331261 8.3:+20544531 None:intergenic
AATGTTCCCTCTCTTGATAT+TGG 0.336344 8.3:+20544530 None:intergenic
TTCACAAACTTCTTGGAAAC+AGG 0.350411 8.3:-20544476 MS.gene71966:intron
CCTCAGATGTTTCTGTTCTC+AGG 0.365977 8.3:+20543961 None:intergenic
AAGAACCATATGGGTTTGAT+TGG 0.366727 8.3:-20544020 MS.gene71966:CDS
TGATTGGGTCAATAAATTCT+TGG 0.369426 8.3:-20544004 MS.gene71966:CDS
AAAACCGTTGCAAACAATTC+AGG 0.371468 8.3:-20544728 MS.gene71966:intron
ACAACGAAATTAAGAACTAT+TGG 0.381215 8.3:-20544230 MS.gene71966:CDS
AAATTCATGGTGCCAAGAAA+TGG 0.392964 8.3:-20544751 MS.gene71966:CDS
GCACAATGCATCCAAATTCA+TGG 0.421820 8.3:-20544764 MS.gene71966:CDS
ATAGGTGTGGAAAGAGTTGC+AGG 0.428963 8.3:-20544578 MS.gene71966:CDS
TTGCCCAAGACAATGTTGTT+GGG 0.441485 8.3:-20544137 MS.gene71966:CDS
GAGAATAAAGATTCAATTGG+TGG 0.441550 8.3:-20544099 MS.gene71966:CDS
TTAGAGAATAAAGATTCAAT+TGG 0.442024 8.3:-20544102 MS.gene71966:CDS
TTGACCCAATCAAACCCATA+TGG 0.448386 8.3:+20544015 None:intergenic
ATCCCCAACAACATTGTCTT+GGG 0.453130 8.3:+20544134 None:intergenic
TATCCCCAACAACATTGTCT+TGG 0.480158 8.3:+20544133 None:intergenic
ATTGCCCAAGACAATGTTGT+TGG 0.485503 8.3:-20544138 MS.gene71966:CDS
TGAAGGTGGTCTTTGATAGC+TGG 0.492221 8.3:-20544273 MS.gene71966:intron
GGCAATAGTTTCTTGTGTAG+TGG 0.500047 8.3:+20544155 None:intergenic
ACTAAGGAAACAATGAATAG+AGG 0.506733 8.3:-20544818 None:intergenic
AGAACCATATGGGTTTGATT+GGG 0.507623 8.3:-20544019 MS.gene71966:CDS
ATAAATTCTTGGAAATTGAT+CGG 0.509384 8.3:-20543993 MS.gene71966:CDS
TTTCCACTGAAGAACCATAT+GGG 0.520720 8.3:-20544029 MS.gene71966:CDS
GAAAGAGTTGCAGGCTAAGA+TGG 0.524821 8.3:-20544569 MS.gene71966:CDS
ATTTCGTTGTCTGTTCGCCC+TGG 0.533830 8.3:+20544243 None:intergenic
GAACATTTCAGATGAAGAAG+AGG 0.534571 8.3:-20544514 MS.gene71966:CDS
TGCCCAAGACAATGTTGTTG+GGG 0.564234 8.3:-20544136 MS.gene71966:CDS
ATTACCTGAATTGTTTGCAA+CGG 0.581651 8.3:+20544724 None:intergenic
TTTGCAGGTTTGAATAGGTG+TGG 0.587834 8.3:-20544591 MS.gene71966:intron
CTTAGACCCAATATCAAGAG+AGG 0.591885 8.3:-20544537 MS.gene71966:CDS
AAACCCATATGGTTCTTCAG+TGG 0.603396 8.3:+20544026 None:intergenic
TGATAGCTGGAAGACTTCCA+GGG 0.621922 8.3:-20544260 MS.gene71966:CDS
AAACAATGAATAGAGGAGCA+TGG 0.625013 8.3:-20544811 None:intergenic
CCTGAGAACAGAAACATCTG+AGG 0.636993 8.3:-20543961 None:intergenic
GAATAGAGGAGCATGGACCC+AGG 0.637505 8.3:-20544804 MS.gene71966:CDS
TTAGACCCAATATCAAGAGA+GGG 0.658332 8.3:-20544536 MS.gene71966:CDS
CTGAGAACAGAAACATCTGA+GGG 0.665777 8.3:-20543960 None:intergenic
TAGAGGAGCATGGACCCAGG+AGG 0.710601 8.3:-20544801 MS.gene71966:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGTAATAAAAGAATAACTT+TGG + chr8.3:20544075-20544094 None:intergenic 15.0%
!! ATAAATTCTTGGAAATTGAT+CGG - chr8.3:20544776-20544795 MS.gene71966:CDS 20.0%
!! TTACAAGTTTAGAAAAGAAA+GGG - chr8.3:20544111-20544130 MS.gene71966:CDS 20.0%
!! TTAGAGAATAAAGATTCAAT+TGG - chr8.3:20544667-20544686 MS.gene71966:intron 20.0%
! AAGAAGAGGATTTGATTATT+AGG - chr8.3:20544269-20544288 MS.gene71966:CDS 25.0%
! ACAACGAAATTAAGAACTAT+TGG - chr8.3:20544539-20544558 MS.gene71966:CDS 25.0%
! CTTACAAGTTTAGAAAAGAA+AGG - chr8.3:20544110-20544129 MS.gene71966:CDS 25.0%
! TACAAGTTTAGAAAAGAAAG+GGG - chr8.3:20544112-20544131 MS.gene71966:CDS 25.0%
ACAAGTTTAGAAAAGAAAGG+GGG - chr8.3:20544113-20544132 MS.gene71966:CDS 30.0%
ATTACCTGAATTGTTTGCAA+CGG + chr8.3:20544048-20544067 None:intergenic 30.0%
GAGAATAAAGATTCAATTGG+TGG - chr8.3:20544670-20544689 MS.gene71966:intron 30.0%
GTTAACTTTCTTAGCATTTG+TGG - chr8.3:20544453-20544472 MS.gene71966:intron 30.0%
TGATTGGGTCAATAAATTCT+TGG - chr8.3:20544765-20544784 MS.gene71966:CDS 30.0%
! ATCTGAAATGTGTGATACAT+AGG - chr8.3:20544368-20544387 MS.gene71966:intron 30.0%
!! TTTTGTTTGCAGGTTTGAAT+AGG - chr8.3:20544173-20544192 MS.gene71966:CDS 30.0%
!!! AGTTTTTTGGTATATGAAGG+TGG - chr8.3:20544482-20544501 MS.gene71966:CDS 30.0%
!!! TGGAGTTTTTTGGTATATGA+AGG - chr8.3:20544479-20544498 MS.gene71966:CDS 30.0%
AAAACCGTTGCAAACAATTC+AGG - chr8.3:20544041-20544060 MS.gene71966:CDS 35.0%
AAGAACCATATGGGTTTGAT+TGG - chr8.3:20544749-20544768 MS.gene71966:CDS 35.0%
AATGTTCCCTCTCTTGATAT+TGG + chr8.3:20544242-20544261 None:intergenic 35.0%
AGAACCATATGGGTTTGATT+GGG - chr8.3:20544750-20544769 MS.gene71966:CDS 35.0%
ATGTTCCCTCTCTTGATATT+GGG + chr8.3:20544241-20544260 None:intergenic 35.0%
ATTAGGCTTCACAAACTTCT+TGG - chr8.3:20544286-20544305 MS.gene71966:intron 35.0%
ATTTCTTGGCACCATGAATT+TGG + chr8.3:20544019-20544038 None:intergenic 35.0%
CAAAATTTCAGCACTTGCTT+TGG + chr8.3:20544158-20544177 None:intergenic 35.0%
GAACATTTCAGATGAAGAAG+AGG - chr8.3:20544255-20544274 MS.gene71966:CDS 35.0%
TTAGACCCAATATCAAGAGA+GGG - chr8.3:20544233-20544252 MS.gene71966:CDS 35.0%
TTCACAAACTTCTTGGAAAC+AGG - chr8.3:20544293-20544312 MS.gene71966:intron 35.0%
TTTCCACTGAAGAACCATAT+GGG - chr8.3:20544740-20544759 MS.gene71966:CDS 35.0%
TTTCTTAGCATTTGTGGTGA+TGG - chr8.3:20544459-20544478 MS.gene71966:intron 35.0%
! AAATTCATGGTGCCAAGAAA+TGG - chr8.3:20544018-20544037 MS.gene71966:CDS 35.0%
! TTTTCCACTGAAGAACCATA+TGG - chr8.3:20544739-20544758 MS.gene71966:CDS 35.0%
!! AGTGCTGAAATTTTGTTTGC+AGG - chr8.3:20544163-20544182 MS.gene71966:CDS 35.0%
!!! TTTGTGGTGATGGAGTTTTT+TGG - chr8.3:20544469-20544488 MS.gene71966:intron 35.0%
AAACCCATATGGTTCTTCAG+TGG + chr8.3:20544746-20544765 None:intergenic 40.0%
ATCCCCAACAACATTGTCTT+GGG + chr8.3:20544638-20544657 None:intergenic 40.0%
ATTGCCCAAGACAATGTTGT+TGG - chr8.3:20544631-20544650 MS.gene71966:intron 40.0%
CAAAAAAGCCAGTCACATAG+AGG - chr8.3:20544576-20544595 MS.gene71966:CDS 40.0%
CTTAGACCCAATATCAAGAG+AGG - chr8.3:20544232-20544251 MS.gene71966:CDS 40.0%
GCACAATGCATCCAAATTCA+TGG - chr8.3:20544005-20544024 MS.gene71966:CDS 40.0%
GGCAATAGTTTCTTGTGTAG+TGG + chr8.3:20544617-20544636 None:intergenic 40.0%
TATCCCCAACAACATTGTCT+TGG + chr8.3:20544639-20544658 None:intergenic 40.0%
TTGACCCAATCAAACCCATA+TGG + chr8.3:20544757-20544776 None:intergenic 40.0%
TTGCCCAAGACAATGTTGTT+GGG - chr8.3:20544632-20544651 MS.gene71966:intron 40.0%
TTTGCAGGTTTGAATAGGTG+TGG - chr8.3:20544178-20544197 MS.gene71966:CDS 40.0%
! TAGCTTTTGATCTTCCTCCT+GGG + chr8.3:20543985-20544004 None:intergenic 40.0%
! TCTTGTGTAGTGGAAGTTTC+TGG + chr8.3:20544607-20544626 None:intergenic 40.0%
! TGCAACGGTTTTCCATTTCT+TGG + chr8.3:20544033-20544052 None:intergenic 40.0%
! TGGTTTTTCCTCTATGTGAC+TGG + chr8.3:20544587-20544606 None:intergenic 40.0%
ATAGGTGTGGAAAGAGTTGC+AGG - chr8.3:20544191-20544210 MS.gene71966:CDS 45.0%
GAAAGAGTTGCAGGCTAAGA+TGG - chr8.3:20544200-20544219 MS.gene71966:CDS 45.0%
TGATAGCTGGAAGACTTCCA+GGG - chr8.3:20544509-20544528 MS.gene71966:CDS 45.0%
TGCCCAAGACAATGTTGTTG+GGG - chr8.3:20544633-20544652 MS.gene71966:intron 45.0%
TGTCTGTTGTGTGACCATGT+CGG + chr8.3:20544340-20544359 None:intergenic 45.0%
! TGAAGGTGGTCTTTGATAGC+TGG - chr8.3:20544496-20544515 MS.gene71966:CDS 45.0%
! TTGATAGCTGGAAGACTTCC+AGG - chr8.3:20544508-20544527 MS.gene71966:CDS 45.0%
!! CTAGCTTTTGATCTTCCTCC+TGG + chr8.3:20543986-20544005 None:intergenic 45.0%
!! TACTCTATGAAGCACCGACA+TGG - chr8.3:20544323-20544342 MS.gene71966:intron 45.0%
ATTTCGTTGTCTGTTCGCCC+TGG + chr8.3:20544529-20544548 None:intergenic 50.0%
! GAATAGAGGAGCATGGACCC+AGG - chr8.3:20543965-20543984 MS.gene71966:CDS 55.0%
! TAGAGGAGCATGGACCCAGG+AGG - chr8.3:20543968-20543987 MS.gene71966:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 20543963 20544828 20543963 ID=MS.gene71966
chr8.3 mRNA 20543963 20544828 20543963 ID=MS.gene71966.t1;Parent=MS.gene71966
chr8.3 exon 20544729 20544828 20544729 ID=MS.gene71966.t1.exon1;Parent=MS.gene71966.t1
chr8.3 CDS 20544729 20544828 20544729 ID=cds.MS.gene71966.t1;Parent=MS.gene71966.t1
chr8.3 exon 20544477 20544606 20544477 ID=MS.gene71966.t1.exon2;Parent=MS.gene71966.t1
chr8.3 CDS 20544477 20544606 20544477 ID=cds.MS.gene71966.t1;Parent=MS.gene71966.t1
chr8.3 exon 20543963 20544290 20543963 ID=MS.gene71966.t1.exon3;Parent=MS.gene71966.t1
chr8.3 CDS 20543963 20544290 20543963 ID=cds.MS.gene71966.t1;Parent=MS.gene71966.t1
Gene Sequence

>MS.gene71966

ATGAATAGAGGAGCATGGACCCAGGAGGAAGATCAAAAGCTAGCACAATGCATCCAAATTCATGGTGCCAAGAAATGGAAAACCGTTGCAAACAATTCAGGTAATAAGACCAAAGTTATTCTTTTATTACAACTCACAAGTAAAAAACTTACAAGTTTAGAAAAGAAAGGGGGAAAAAGTTGTTACTTGAAACCAAAGCAAGTGCTGAAATTTTGTTTGCAGGTTTGAATAGGTGTGGAAAGAGTTGCAGGCTAAGATGGTTGAACTATCTTAGACCCAATATCAAGAGAGGGAACATTTCAGATGAAGAAGAGGATTTGATTATTAGGCTTCACAAACTTCTTGGAAACAGGTTTCTTATACTCTATGAAGCACCGACATGGTCACACAACAGACACACTTTTAATCTGAAATGTGTGATACATAGGTTATACTCATATATCATATATACAAAATTGTAGTTTTGAAGACAAATAATGTTAATGTATGAGTTAACTTTCTTAGCATTTGTGGTGATGGAGTTTTTTGGTATATGAAGGTGGTCTTTGATAGCTGGAAGACTTCCAGGGCGAACAGACAACGAAATTAAGAACTATTGGAATTCTCATTTGTGCAAAAAAGCCAGTCACATAGAGGAAAAACCAGAAACTTCCACTACACAAGAAACTATTGCCCAAGACAATGTTGTTGGGGATAATGCTATGTTAGAGAATAAAGATTCAATTGGTGGAAGTCTTGATTCAGATGTTATCATTGATGTGAATGAATTCTTAGACTTTTCCACTGAAGAACCATATGGGTTTGATTGGGTCAATAAATTCTTGGAAATTGATCGGTTTCACATTCCTGAGAACAGAAACATCTGA
Protein sequence

>MS.gene71966.t1

MNRGAWTQEEDQKLAQCIQIHGAKKWKTVANNSGLNRCGKSCRLRWLNYLRPNIKRGNISDEEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLCKKASHIEEKPETSTTQETIAQDNVVGDNAMLENKDSIGGSLDSDVIIDVNEFLDFSTEEPYGFDWVNKFLEIDRFHIPENRNI