Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71990.t1 | KEH31637.1 | 90.4 | 417 | 35 | 1 | 138 | 554 | 104 | 515 | 3.70E-226 | 794.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71990.t1 | F4IXE7 | 32.5 | 419 | 245 | 14 | 143 | 537 | 619 | 1023 | 1.9e-53 | 211.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71990.t1 | A0A072UPL4 | 90.4 | 417 | 35 | 1 | 138 | 554 | 104 | 515 | 2.7e-226 | 794.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene71990.t1 | TR | PHD |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71990.t1 | MTR_4g099530 | 82.983 | 523 | 46 | 3 | 65 | 554 | 3 | 515 | 0.0 | 893 |
| MS.gene71990.t1 | MTR_1g103830 | 33.705 | 448 | 250 | 14 | 142 | 554 | 603 | 1038 | 7.58e-66 | 233 |
| MS.gene71990.t1 | MTR_1g072130 | 32.701 | 422 | 248 | 10 | 142 | 537 | 809 | 1220 | 3.81e-63 | 225 |
| MS.gene71990.t1 | MTR_2g078040 | 30.024 | 423 | 262 | 13 | 139 | 537 | 754 | 1166 | 4.37e-53 | 195 |
| MS.gene71990.t1 | MTR_5g071340 | 28.289 | 456 | 281 | 17 | 111 | 537 | 646 | 1084 | 3.12e-48 | 181 |
| MS.gene71990.t1 | MTR_3g464550 | 26.444 | 450 | 284 | 15 | 122 | 544 | 585 | 1014 | 2.95e-45 | 172 |
| MS.gene71990.t1 | MTR_7g109640 | 28.894 | 398 | 233 | 12 | 144 | 510 | 383 | 761 | 3.36e-42 | 162 |
| MS.gene71990.t1 | MTR_5g024500 | 26.932 | 427 | 268 | 11 | 145 | 537 | 3 | 419 | 2.19e-40 | 152 |
| MS.gene71990.t1 | MTR_5g024390 | 26.698 | 427 | 269 | 11 | 145 | 537 | 3 | 419 | 1.78e-39 | 149 |
| MS.gene71990.t1 | MTR_7g095140 | 28.435 | 313 | 202 | 8 | 250 | 553 | 17 | 316 | 1.92e-33 | 131 |
| MS.gene71990.t1 | MTR_3g103120 | 23.467 | 473 | 300 | 14 | 105 | 537 | 382 | 832 | 1.48e-32 | 133 |
| MS.gene71990.t1 | MTR_3g103110 | 28.076 | 317 | 196 | 9 | 239 | 537 | 489 | 791 | 5.99e-32 | 131 |
| MS.gene71990.t1 | MTR_1g068930 | 24.153 | 443 | 235 | 16 | 155 | 527 | 435 | 846 | 7.59e-28 | 119 |
| MS.gene71990.t1 | MTR_1g068930 | 24.368 | 435 | 244 | 15 | 155 | 527 | 472 | 883 | 8.39e-28 | 119 |
| MS.gene71990.t1 | MTR_1g062330 | 23.478 | 460 | 256 | 13 | 155 | 537 | 362 | 802 | 8.94e-27 | 115 |
| MS.gene71990.t1 | MTR_4g056990 | 23.947 | 451 | 256 | 16 | 155 | 543 | 200 | 625 | 6.04e-25 | 109 |
| MS.gene71990.t1 | MTR_7g102610 | 21.818 | 440 | 243 | 14 | 155 | 515 | 507 | 924 | 6.63e-25 | 110 |
| MS.gene71990.t1 | MTR_4g050090 | 22.747 | 466 | 253 | 15 | 155 | 537 | 200 | 641 | 2.82e-23 | 104 |
| MS.gene71990.t1 | MTR_3g103160 | 32.317 | 164 | 108 | 2 | 375 | 537 | 275 | 436 | 3.69e-20 | 93.6 |
| MS.gene71990.t1 | MTR_4g057290 | 23.480 | 477 | 248 | 18 | 124 | 511 | 66 | 514 | 3.79e-19 | 91.3 |
| MS.gene71990.t1 | MTR_2g084425 | 25.714 | 175 | 125 | 2 | 364 | 535 | 844 | 1016 | 2.63e-17 | 86.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71990.t1 | AT4G14920 | 35.154 | 421 | 236 | 11 | 142 | 538 | 577 | 984 | 5.34e-69 | 241 |
| MS.gene71990.t1 | AT4G14920 | 35.154 | 421 | 236 | 11 | 142 | 538 | 577 | 984 | 5.34e-69 | 241 |
| MS.gene71990.t1 | AT4G14920 | 35.154 | 421 | 236 | 11 | 142 | 538 | 577 | 984 | 5.53e-69 | 241 |
| MS.gene71990.t1 | AT5G36740 | 33.560 | 441 | 258 | 10 | 124 | 538 | 519 | 950 | 1.11e-68 | 240 |
| MS.gene71990.t1 | AT5G36740 | 33.560 | 441 | 258 | 10 | 124 | 538 | 519 | 950 | 1.11e-68 | 240 |
| MS.gene71990.t1 | AT5G36740 | 33.645 | 428 | 244 | 10 | 142 | 538 | 389 | 807 | 5.67e-68 | 238 |
| MS.gene71990.t1 | AT1G05380 | 33.023 | 430 | 243 | 12 | 142 | 542 | 517 | 930 | 3.29e-66 | 233 |
| MS.gene71990.t1 | AT1G05380 | 33.023 | 430 | 243 | 12 | 142 | 542 | 517 | 930 | 3.29e-66 | 233 |
| MS.gene71990.t1 | AT1G05380 | 33.023 | 430 | 243 | 12 | 142 | 542 | 517 | 930 | 3.29e-66 | 233 |
| MS.gene71990.t1 | AT5G36670 | 31.291 | 457 | 261 | 12 | 124 | 538 | 519 | 964 | 1.70e-58 | 211 |
| MS.gene71990.t1 | AT5G36670 | 31.291 | 457 | 261 | 12 | 124 | 538 | 519 | 964 | 1.70e-58 | 211 |
| MS.gene71990.t1 | AT3G14980 | 32.458 | 419 | 245 | 14 | 143 | 537 | 574 | 978 | 4.05e-58 | 210 |
| MS.gene71990.t1 | AT3G14980 | 32.458 | 419 | 245 | 14 | 143 | 537 | 619 | 1023 | 4.86e-58 | 210 |
| MS.gene71990.t1 | AT3G14980 | 32.458 | 419 | 245 | 14 | 143 | 537 | 619 | 1023 | 4.86e-58 | 210 |
| MS.gene71990.t1 | AT3G14980 | 32.458 | 419 | 245 | 14 | 143 | 537 | 619 | 1023 | 4.86e-58 | 210 |
| MS.gene71990.t1 | AT3G14980 | 32.458 | 419 | 245 | 14 | 143 | 537 | 619 | 1023 | 9.21e-58 | 208 |
| MS.gene71990.t1 | AT5G36670 | 31.306 | 444 | 247 | 12 | 142 | 538 | 389 | 821 | 1.95e-57 | 207 |
| MS.gene71990.t1 | AT5G36670 | 30.835 | 467 | 260 | 13 | 124 | 538 | 519 | 974 | 4.13e-57 | 207 |
| MS.gene71990.t1 | AT5G36740 | 32.461 | 382 | 224 | 9 | 124 | 479 | 519 | 892 | 2.43e-52 | 192 |
| MS.gene71990.t1 | AT5G36740 | 32.461 | 382 | 224 | 9 | 124 | 479 | 519 | 892 | 2.43e-52 | 192 |
| MS.gene71990.t1 | AT5G36670 | 32.461 | 382 | 224 | 9 | 124 | 479 | 519 | 892 | 2.43e-52 | 192 |
| MS.gene71990.t1 | AT5G58610 | 27.778 | 432 | 265 | 14 | 139 | 538 | 362 | 778 | 4.71e-40 | 156 |
| MS.gene71990.t1 | AT5G58610 | 27.778 | 432 | 265 | 14 | 139 | 538 | 584 | 1000 | 7.46e-40 | 155 |
| MS.gene71990.t1 | AT5G58610 | 27.778 | 432 | 265 | 14 | 139 | 538 | 593 | 1009 | 8.20e-40 | 155 |
| MS.gene71990.t1 | AT5G58610 | 27.778 | 432 | 265 | 14 | 139 | 538 | 584 | 1000 | 9.02e-40 | 155 |
| MS.gene71990.t1 | AT5G58610 | 27.778 | 432 | 265 | 14 | 139 | 538 | 593 | 1009 | 9.26e-40 | 155 |
| MS.gene71990.t1 | AT5G58610 | 27.778 | 432 | 265 | 14 | 139 | 538 | 593 | 1009 | 9.26e-40 | 155 |
| MS.gene71990.t1 | AT5G58610 | 26.303 | 422 | 258 | 13 | 139 | 538 | 584 | 974 | 2.16e-37 | 148 |
| MS.gene71990.t1 | AT5G58610 | 26.303 | 422 | 258 | 13 | 139 | 538 | 584 | 974 | 3.05e-37 | 147 |
| MS.gene71990.t1 | AT3G14980 | 31.003 | 329 | 190 | 13 | 143 | 447 | 619 | 934 | 1.19e-34 | 140 |
| MS.gene71990.t1 | AT3G53680 | 24.169 | 451 | 252 | 16 | 155 | 537 | 403 | 831 | 1.40e-32 | 133 |
| MS.gene71990.t1 | AT3G53680 | 24.169 | 451 | 252 | 16 | 155 | 537 | 405 | 833 | 1.55e-32 | 133 |
| MS.gene71990.t1 | AT2G37520 | 23.516 | 455 | 251 | 15 | 155 | 537 | 386 | 815 | 5.33e-32 | 131 |
| MS.gene71990.t1 | AT5G58610 | 27.513 | 378 | 228 | 13 | 139 | 484 | 593 | 956 | 2.24e-31 | 130 |
| MS.gene71990.t1 | AT5G58610 | 27.513 | 378 | 228 | 13 | 139 | 484 | 584 | 947 | 3.93e-31 | 129 |
| MS.gene71990.t1 | AT2G27980 | 24.301 | 465 | 250 | 15 | 155 | 537 | 613 | 1057 | 1.64e-29 | 124 |
| MS.gene71990.t1 | AT2G36720 | 23.861 | 461 | 249 | 16 | 155 | 535 | 533 | 971 | 2.07e-28 | 120 |
| MS.gene71990.t1 | AT2G36720 | 23.861 | 461 | 249 | 16 | 155 | 535 | 533 | 971 | 2.07e-28 | 120 |
| MS.gene71990.t1 | AT5G58610 | 26.765 | 340 | 203 | 13 | 139 | 446 | 584 | 909 | 7.35e-23 | 103 |
| MS.gene71990.t1 | AT5G63900 | 25.424 | 295 | 205 | 8 | 246 | 537 | 258 | 540 | 1.65e-21 | 98.6 |
Find 120 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTCCCATTGATATTATTT+TGG | 0.141230 | 8.1:-22766823 | None:intergenic |
| ACGAATTTGCCATTTGTTAA+TGG | 0.158481 | 8.1:+22767693 | MS.gene71990:CDS |
| TCACTTATTTCCACATAATT+TGG | 0.186213 | 8.1:-22765482 | None:intergenic |
| TCCCAGAAATTACCTATTTC+AGG | 0.195115 | 8.1:-22765602 | None:intergenic |
| GACCTGAAATAGGTAATTTC+TGG | 0.234540 | 8.1:+22765600 | MS.gene71990:CDS |
| CTTTCAACCATTTACTAATC+AGG | 0.274878 | 8.1:-22766111 | None:intergenic |
| ATTTACTAATCAGGATGTTT+TGG | 0.283205 | 8.1:-22766102 | None:intergenic |
| TTGAAAATTCGACCGGTTAT+CGG | 0.303297 | 8.1:-22765956 | None:intergenic |
| AAAACATCCTGATTAGTAAA+TGG | 0.312020 | 8.1:+22766104 | MS.gene71990:CDS |
| TCCGGATTAATACTCGTTTC+CGG | 0.320410 | 8.1:-22765698 | None:intergenic |
| TCAACAGTTTGTGGATTAGA+TGG | 0.321798 | 8.1:-22768087 | None:intergenic |
| TGCTTCTAATTGACAGTATT+AGG | 0.322640 | 8.1:-22768261 | None:intergenic |
| CCTTGACTCTACAGATTTCA+TGG | 0.325979 | 8.1:+22767616 | MS.gene71990:intron |
| CACTTCTCGTATCCATTTGT+TGG | 0.328393 | 8.1:-22766868 | None:intergenic |
| TGGACTTGAATGAGCCATTC+GGG | 0.345809 | 8.1:+22768229 | MS.gene71990:CDS |
| TCCATTGGCAAACTTTGTTC+CGG | 0.346997 | 8.1:-22765716 | None:intergenic |
| TTGAAGGGTTAGAAGCAAAC+TGG | 0.364828 | 8.1:+22765531 | MS.gene71990:CDS |
| CTTGTTTCGTTCATTGATGA+TGG | 0.366832 | 8.1:-22765746 | None:intergenic |
| AAATTACCTATTTCAGGTCT+TGG | 0.368746 | 8.1:-22765596 | None:intergenic |
| CGTAGACCAAGACCTGAAAT+AGG | 0.369525 | 8.1:+22765590 | MS.gene71990:CDS |
| TAAACAAACAATGTCATGTA+TGG | 0.389738 | 8.1:-22766173 | None:intergenic |
| GCATACCTCTTTACAACTTA+CGG | 0.394078 | 8.1:-22766683 | None:intergenic |
| TGCAGCTGCTTGCATGTTGA+TGG | 0.397741 | 8.1:+22766922 | MS.gene71990:CDS |
| GCAACCATACAAACGCATTT+CGG | 0.399165 | 8.1:+22766057 | MS.gene71990:CDS |
| GTTTGTTTAGTTTGTGGAAA+AGG | 0.400119 | 8.1:+22766187 | MS.gene71990:CDS |
| TGAAATAGCTACCATTGTTC+CGG | 0.403012 | 8.1:+22765679 | MS.gene71990:CDS |
| GCTATTTCATTCACCGATGA+TGG | 0.410514 | 8.1:-22765665 | None:intergenic |
| TCAACAAACAAGTCATAATC+TGG | 0.410645 | 8.1:+22765775 | MS.gene71990:CDS |
| TACACTGCTTGTTGCATTGG+CGG | 0.412327 | 8.1:-22766489 | None:intergenic |
| ACTTACACTGCTTGTTGCAT+TGG | 0.420126 | 8.1:-22766492 | None:intergenic |
| GACATTGTTTGTTTAGTTTG+TGG | 0.426333 | 8.1:+22766181 | MS.gene71990:CDS |
| CTGCAAGTGCAAATACTGTA+AGG | 0.426643 | 8.1:+22766429 | MS.gene71990:CDS |
| GGAATCCAAAATAATATCAA+TGG | 0.427814 | 8.1:+22766818 | MS.gene71990:CDS |
| ATTAAGCAAAAGACTTCTAC+TGG | 0.430490 | 8.1:+22768209 | MS.gene71990:CDS |
| CTGGACTTGAATGAGCCATT+CGG | 0.434486 | 8.1:+22768228 | MS.gene71990:CDS |
| ATGGGAATGAGAGCTATTCT+TGG | 0.435531 | 8.1:+22766837 | MS.gene71990:CDS |
| GAAGTCCCCGCTGTTGCGCT+TGG | 0.436355 | 8.1:-22765824 | None:intergenic |
| AAAGATTGATGAGAAATTGA+AGG | 0.437819 | 8.1:+22766787 | MS.gene71990:intron |
| GAGAAATTGAAGGGATCAAT+CGG | 0.439072 | 8.1:+22766797 | MS.gene71990:CDS |
| ACCTGAAATAGGTAATTTCT+GGG | 0.445985 | 8.1:+22765601 | MS.gene71990:CDS |
| TTCTCGTATCCATTTGTTGG+AGG | 0.451574 | 8.1:-22766865 | None:intergenic |
| CAATTATCTCCATTAACAAA+TGG | 0.453252 | 8.1:-22767702 | None:intergenic |
| ATGTTGATGGAAGAAGCTTT+TGG | 0.456514 | 8.1:+22766935 | MS.gene71990:CDS |
| GTTAATGGAGATAATTGAAT+CGG | 0.460264 | 8.1:+22767708 | MS.gene71990:CDS |
| TTGCTTAATCGTATAGCTCC+GGG | 0.462605 | 8.1:-22768195 | None:intergenic |
| CTCAGGAAAACGACAACCAT+TGG | 0.462642 | 8.1:+22766395 | MS.gene71990:CDS |
| GAAACTCCAAGCGCAACAGC+GGG | 0.464068 | 8.1:+22765818 | MS.gene71990:CDS |
| TTGGAGAGTCCTCCAACAAA+TGG | 0.464964 | 8.1:+22766856 | MS.gene71990:CDS |
| TTTGCTTAATCGTATAGCTC+CGG | 0.467808 | 8.1:-22768196 | None:intergenic |
| GCCACCGAAATGCGTTTGTA+TGG | 0.477551 | 8.1:-22766061 | None:intergenic |
| TTCCACATTTCAACAGTTTG+TGG | 0.481433 | 8.1:-22768096 | None:intergenic |
| TTCGAAGTCTTGAAGTTGAA+AGG | 0.481443 | 8.1:+22768055 | MS.gene71990:CDS |
| TGAAGATGGCATATACTTTG+AGG | 0.486004 | 8.1:+22765447 | None:intergenic |
| AGAAACTCCAAGCGCAACAG+CGG | 0.487445 | 8.1:+22765817 | MS.gene71990:CDS |
| CCGAGGTGCGTTACCATGAT+GGG | 0.489289 | 8.1:+22765927 | MS.gene71990:CDS |
| GAATCCAAAATAATATCAAT+GGG | 0.493433 | 8.1:+22766819 | MS.gene71990:CDS |
| TTGTTCCGTAAGTTGTAAAG+AGG | 0.493762 | 8.1:+22766678 | MS.gene71990:CDS |
| ACCGAGGTGCGTTACCATGA+TGG | 0.496123 | 8.1:+22765926 | MS.gene71990:CDS |
| TAGCTCCGGGGAACATCAAA+AGG | 0.501144 | 8.1:-22768182 | None:intergenic |
| ATGATAACAGACACACATAC+TGG | 0.502452 | 8.1:+22766959 | MS.gene71990:CDS |
| TGGAAAAGGAGAAGATGAAG+GGG | 0.508556 | 8.1:+22766201 | MS.gene71990:CDS |
| TCCGGAAACGAGTATTAATC+CGG | 0.511461 | 8.1:+22765697 | MS.gene71990:CDS |
| GAAGATGGCATATACTTTGA+GGG | 0.519625 | 8.1:+22765448 | None:intergenic |
| TGTGGAAAAGGAGAAGATGA+AGG | 0.530192 | 8.1:+22766199 | MS.gene71990:CDS |
| TCCGGAACAAAGTTTGCCAA+TGG | 0.531404 | 8.1:+22765715 | MS.gene71990:CDS |
| AAGATTGATGAGAAATTGAA+GGG | 0.532048 | 8.1:+22766788 | MS.gene71990:intron |
| AGCACAAGAACGGTGATAAG+TGG | 0.533107 | 8.1:-22766251 | None:intergenic |
| GAAAGTGAGTCAAATATTGA+AGG | 0.536289 | 8.1:+22765515 | MS.gene71990:CDS |
| GTCGCAACAGCTACATAAGA+TGG | 0.537125 | 8.1:-22765984 | None:intergenic |
| GGCTCCATTGAAAATTCGAC+CGG | 0.537301 | 8.1:-22765963 | None:intergenic |
| GATGATGGAACTGTTTCCAT+TGG | 0.538815 | 8.1:-22765731 | None:intergenic |
| AACTGAAACACCTCCATCAT+CGG | 0.540100 | 8.1:+22765652 | MS.gene71990:CDS |
| AGTTGTCAACCATGCTAGGA+TGG | 0.543516 | 8.1:-22765882 | None:intergenic |
| CTTGACTCTACAGATTTCAT+GGG | 0.545472 | 8.1:+22767617 | MS.gene71990:intron |
| GACCGTCGACCTCGTCGACC+TGG | 0.547724 | 8.1:-22765560 | None:intergenic |
| CTGTAAGGGTGATGATGAAG+AGG | 0.550087 | 8.1:+22766444 | MS.gene71990:CDS |
| TGGCGGCACATGATGTCTAA+AGG | 0.550630 | 8.1:-22766472 | None:intergenic |
| ACTTGCAAGGAAATTGATGA+AGG | 0.553512 | 8.1:+22765902 | MS.gene71990:CDS |
| GCCTCATCTGTGGCAATGAA+AGG | 0.555749 | 8.1:-22767658 | None:intergenic |
| TGCAAGTTGTCAACCATGCT+AGG | 0.558541 | 8.1:-22765886 | None:intergenic |
| GCCTTTCATTGCCACAGATG+AGG | 0.563244 | 8.1:+22767657 | MS.gene71990:CDS |
| CCCATCATGGTAACGCACCT+CGG | 0.563559 | 8.1:-22765927 | None:intergenic |
| GATTAGTAAATGGTTGAAAG+AGG | 0.563585 | 8.1:+22766114 | MS.gene71990:CDS |
| AAACAAACAATGTCATGTAT+GGG | 0.563802 | 8.1:-22766172 | None:intergenic |
| TTATGTAATAAGCAATTCAA+AGG | 0.566767 | 8.1:+22766898 | MS.gene71990:CDS |
| ACGCACAAGACCAAATTATG+TGG | 0.574274 | 8.1:+22765472 | MS.gene71990:CDS |
| AGTTTGTGGATTAGATGGAA+TGG | 0.581324 | 8.1:-22768082 | None:intergenic |
| GCCTCTGTATGCCTCATCTG+TGG | 0.584277 | 8.1:-22767668 | None:intergenic |
| ATCCACAAACTGTTGAAATG+TGG | 0.588515 | 8.1:+22768094 | MS.gene71990:CDS |
| GCGACGAGGAAATCTCTGTA+TGG | 0.591878 | 8.1:+22766002 | MS.gene71990:CDS |
| GTGGAAAAGGAGAAGATGAA+GGG | 0.593089 | 8.1:+22766200 | MS.gene71990:CDS |
| TGAAGGGTTAGAAGCAAACT+GGG | 0.594789 | 8.1:+22765532 | MS.gene71990:CDS |
| AAAGTGAGTCAAATATTGAA+GGG | 0.601009 | 8.1:+22765516 | MS.gene71990:CDS |
| ACCATACAAACGCATTTCGG+TGG | 0.602664 | 8.1:+22766060 | MS.gene71990:CDS |
| AATACTCGTTTCCGGAACAA+TGG | 0.603556 | 8.1:-22765690 | None:intergenic |
| TAATTGCTGCAGCTACCGTA+AGG | 0.611328 | 8.1:+22767445 | MS.gene71990:CDS |
| TGCTTAGATCAAATCTGAGG+AGG | 0.617602 | 8.1:+22767373 | MS.gene71990:intron |
| CCTGTATAAAAGCACAAGAA+CGG | 0.617850 | 8.1:-22766261 | None:intergenic |
| ACAAGAACGGTGATAAGTGG+AGG | 0.625049 | 8.1:-22766248 | None:intergenic |
| AGCATGGTTGACAACTTGCA+AGG | 0.627667 | 8.1:+22765889 | MS.gene71990:CDS |
| TGCAAGTGCAAATACTGTAA+GGG | 0.630487 | 8.1:+22766430 | MS.gene71990:CDS |
| ATTTCATTCACCGATGATGG+AGG | 0.630618 | 8.1:-22765662 | None:intergenic |
| AACCAGGTCGACGAGGTCGA+CGG | 0.633162 | 8.1:+22765558 | MS.gene71990:CDS |
| TGCAGTAAGAACATAACCAA+TGG | 0.637831 | 8.1:-22766411 | None:intergenic |
| AATTGCTTAGATCAAATCTG+AGG | 0.638264 | 8.1:+22767370 | MS.gene71990:intron |
| AACGCATTTCGGTGGCAAAG+CGG | 0.641653 | 8.1:+22766068 | MS.gene71990:CDS |
| CGAGGTGCGTTACCATGATG+GGG | 0.652213 | 8.1:+22765928 | MS.gene71990:CDS |
| CTTGCAAGGAAATTGATGAA+GGG | 0.653849 | 8.1:+22765903 | MS.gene71990:CDS |
| TTAGGCTCAACATCCCCGAA+TGG | 0.660828 | 8.1:-22768243 | None:intergenic |
| CACACATACTGGCGTCAATG+TGG | 0.663750 | 8.1:+22766970 | MS.gene71990:CDS |
| CTTATGTAGCTGTTGCGACG+AGG | 0.663870 | 8.1:+22765988 | MS.gene71990:CDS |
| ACAAATGGATACGAGAAGTG+AGG | 0.666914 | 8.1:+22766871 | MS.gene71990:CDS |
| GGAAAAGGAGAAGATGAAGG+GGG | 0.669030 | 8.1:+22766202 | MS.gene71990:CDS |
| CAAGAACGGTGATAAGTGGA+GGG | 0.669312 | 8.1:-22766247 | None:intergenic |
| GCCACAGATGAGGCATACAG+AGG | 0.671197 | 8.1:+22767667 | MS.gene71990:CDS |
| AGAGTGTTCTATACAACCGC+AGG | 0.671533 | 8.1:+22766996 | MS.gene71990:CDS |
| TGCTTAATCGTATAGCTCCG+GGG | 0.678737 | 8.1:-22768194 | None:intergenic |
| GGAAATTGATGAAGGGACCG+AGG | 0.685280 | 8.1:+22765910 | MS.gene71990:CDS |
| GGACTTGAATGAGCCATTCG+GGG | 0.695242 | 8.1:+22768230 | MS.gene71990:CDS |
| AAACTCCAAGCGCAACAGCG+GGG | 0.743032 | 8.1:+22765819 | MS.gene71990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTGAAATTTTATTTTTTTT+TGG | - | chr8.1:22767332-22767351 | None:intergenic | 10.0% |
| !!! | TTTTTATAATGTTTTATTTC+TGG | - | chr8.1:22765860-22765879 | None:intergenic | 10.0% |
| !! | AAACTGAAAAAGATTTATTA+AGG | + | chr8.1:22766650-22766669 | MS.gene71990:CDS | 15.0% |
| !!! | AATAATTTGTTATTTCTTCA+CGG | + | chr8.1:22767534-22767553 | MS.gene71990:intron | 15.0% |
| !!! | AATTTAATTCACTTGTTTTA+AGG | + | chr8.1:22767966-22767985 | MS.gene71990:intron | 15.0% |
| !! | AATCAAATACATGATATTTG+TGG | + | chr8.1:22766749-22766768 | MS.gene71990:intron | 20.0% |
| !! | ATCAAATACATGATATTTGT+GGG | + | chr8.1:22766750-22766769 | MS.gene71990:intron | 20.0% |
| !! | GAATCCAAAATAATATCAAT+GGG | + | chr8.1:22766819-22766838 | MS.gene71990:CDS | 20.0% |
| !! | TGGTAAAAAATATATTTGGT+TGG | - | chr8.1:22767081-22767100 | None:intergenic | 20.0% |
| !! | TTATGTAATAAGCAATTCAA+AGG | + | chr8.1:22766898-22766917 | MS.gene71990:CDS | 20.0% |
| !!! | ACTTTAGATTAAAAGAGTAT+CGG | + | chr8.1:22767136-22767155 | MS.gene71990:intron | 20.0% |
| !!! | AGTTTACAAAATGATTTTGT+AGG | + | chr8.1:22766607-22766626 | MS.gene71990:intron | 20.0% |
| !!! | ATAATTTGTTATTTCTTCAC+GGG | + | chr8.1:22767535-22767554 | MS.gene71990:intron | 20.0% |
| !!! | CTTTTTCAACTATTTTGTTT+TGG | + | chr8.1:22767493-22767512 | MS.gene71990:intron | 20.0% |
| ! | AAAACATCCTGATTAGTAAA+TGG | + | chr8.1:22766104-22766123 | MS.gene71990:CDS | 25.0% |
| ! | AAACAAACAATGTCATGTAT+GGG | - | chr8.1:22766175-22766194 | None:intergenic | 25.0% |
| ! | AAAGATTGATGAGAAATTGA+AGG | + | chr8.1:22766787-22766806 | MS.gene71990:intron | 25.0% |
| ! | AAAGTGAGTCAAATATTGAA+GGG | + | chr8.1:22765516-22765535 | MS.gene71990:CDS | 25.0% |
| ! | AAGATTGATGAGAAATTGAA+GGG | + | chr8.1:22766788-22766807 | MS.gene71990:intron | 25.0% |
| ! | AATTAAGTTCAATGGAAAAG+TGG | - | chr8.1:22767917-22767936 | None:intergenic | 25.0% |
| ! | AGATTTGATCTAAGCAATTA+AGG | - | chr8.1:22767369-22767388 | None:intergenic | 25.0% |
| ! | ATGAATGCAATTAAGTTCAA+TGG | - | chr8.1:22767925-22767944 | None:intergenic | 25.0% |
| ! | CAAAAAGTTGAAGAAAGATA+TGG | + | chr8.1:22768149-22768168 | MS.gene71990:CDS | 25.0% |
| ! | CAATTATCTCCATTAACAAA+TGG | - | chr8.1:22767705-22767724 | None:intergenic | 25.0% |
| ! | GCAGTGGTAAAAAATATATT+TGG | - | chr8.1:22767085-22767104 | None:intergenic | 25.0% |
| ! | GGAATCCAAAATAATATCAA+TGG | + | chr8.1:22766818-22766837 | MS.gene71990:CDS | 25.0% |
| ! | GTTAATGGAGATAATTGAAT+CGG | + | chr8.1:22767708-22767727 | MS.gene71990:CDS | 25.0% |
| ! | TAAACAAACAATGTCATGTA+TGG | - | chr8.1:22766176-22766195 | None:intergenic | 25.0% |
| ! | TCACTTATTTCCACATAATT+TGG | - | chr8.1:22765485-22765504 | None:intergenic | 25.0% |
| !! | AAAAATATATTTGGTTGGTG+CGG | - | chr8.1:22767076-22767095 | None:intergenic | 25.0% |
| !! | AAAATGATTTTGTAGGTCAT+TGG | + | chr8.1:22766614-22766633 | MS.gene71990:intron | 25.0% |
| !! | ATTTACTAATCAGGATGTTT+TGG | - | chr8.1:22766105-22766124 | None:intergenic | 25.0% |
| !! | CATTCCCATTGATATTATTT+TGG | - | chr8.1:22766826-22766845 | None:intergenic | 25.0% |
| !! | TAATCTAAAGTGTCATTACA+TGG | - | chr8.1:22767127-22767146 | None:intergenic | 25.0% |
| !! | TTTTCTTTTGCTTACATGAA+GGG | + | chr8.1:22766307-22766326 | MS.gene71990:intron | 25.0% |
| !! | TTTTTCTTTTGCTTACATGA+AGG | + | chr8.1:22766306-22766325 | MS.gene71990:intron | 25.0% |
| !!! | CAACTATTTTGTTTTGGTTA+TGG | + | chr8.1:22767499-22767518 | MS.gene71990:intron | 25.0% |
| !!! | CTTTAGATTAAAAGAGTATC+GGG | + | chr8.1:22767137-22767156 | MS.gene71990:intron | 25.0% |
| !!! | CTTTTCATTTTTATACTGCA+GGG | + | chr8.1:22766367-22766386 | MS.gene71990:intron | 25.0% |
| !!! | GTTGAAAAAGTATCAACAAT+TGG | - | chr8.1:22767483-22767502 | None:intergenic | 25.0% |
| !!! | TCTTTTCATTTTTATACTGC+AGG | + | chr8.1:22766366-22766385 | MS.gene71990:intron | 25.0% |
| !!! | TGCATATCACATTTTGAAAA+TGG | - | chr8.1:22767802-22767821 | None:intergenic | 25.0% |
| AAGTATCAACAATTGGAAAG+AGG | - | chr8.1:22767476-22767495 | None:intergenic | 30.0% | |
| AATTGCTTAGATCAAATCTG+AGG | + | chr8.1:22767370-22767389 | MS.gene71990:intron | 30.0% | |
| ACCTGAAATAGGTAATTTCT+GGG | + | chr8.1:22765601-22765620 | MS.gene71990:CDS | 30.0% | |
| AGTTATGGTCATGAAAACAA+AGG | - | chr8.1:22766578-22766597 | None:intergenic | 30.0% | |
| ATAAAAAAACCATCCTAGCA+TGG | + | chr8.1:22765873-22765892 | MS.gene71990:CDS | 30.0% | |
| ATACAACATGCATGAGATAT+AGG | - | chr8.1:22767751-22767770 | None:intergenic | 30.0% | |
| ATTAAGCAAAAGACTTCTAC+TGG | + | chr8.1:22768209-22768228 | MS.gene71990:CDS | 30.0% | |
| CTTTCAACCATTTACTAATC+AGG | - | chr8.1:22766114-22766133 | None:intergenic | 30.0% | |
| GAAAGTGAGTCAAATATTGA+AGG | + | chr8.1:22765515-22765534 | MS.gene71990:CDS | 30.0% | |
| GATTAGTAAATGGTTGAAAG+AGG | + | chr8.1:22766114-22766133 | MS.gene71990:CDS | 30.0% | |
| GCAAAAATATAACTTCAGTG+AGG | + | chr8.1:22768119-22768138 | MS.gene71990:CDS | 30.0% | |
| TAAACTACTTCAGTGAGTTA+TGG | - | chr8.1:22766593-22766612 | None:intergenic | 30.0% | |
| TCAACAAACAAGTCATAATC+TGG | + | chr8.1:22765775-22765794 | MS.gene71990:CDS | 30.0% | |
| TTGAAATATCAGATGATGAC+CGG | - | chr8.1:22766523-22766542 | None:intergenic | 30.0% | |
| ! | AAATTACCTATTTCAGGTCT+TGG | - | chr8.1:22765599-22765618 | None:intergenic | 30.0% |
| ! | ACGAATTTGCCATTTGTTAA+TGG | + | chr8.1:22767693-22767712 | MS.gene71990:CDS | 30.0% |
| !! | GACATTGTTTGTTTAGTTTG+TGG | + | chr8.1:22766181-22766200 | MS.gene71990:CDS | 30.0% |
| !! | GTTTGTTTAGTTTGTGGAAA+AGG | + | chr8.1:22766187-22766206 | MS.gene71990:CDS | 30.0% |
| !!! | GTATGCATTCATTTTTTCTG+TGG | + | chr8.1:22766700-22766719 | MS.gene71990:intron | 30.0% |
| AAGAGGATGAACAAAAACGT+CGG | + | chr8.1:22766131-22766150 | MS.gene71990:CDS | 35.0% | |
| AAGTTCAATGGAAAAGTGGA+AGG | - | chr8.1:22767913-22767932 | None:intergenic | 35.0% | |
| ACATATCTCTCTCTTCTACA+AGG | - | chr8.1:22767880-22767899 | None:intergenic | 35.0% | |
| ACTTGCAAGGAAATTGATGA+AGG | + | chr8.1:22765902-22765921 | MS.gene71990:CDS | 35.0% | |
| ATAGTGAGTGATAAATGCAG+TGG | - | chr8.1:22767101-22767120 | None:intergenic | 35.0% | |
| ATCCACAAACTGTTGAAATG+TGG | + | chr8.1:22768094-22768113 | MS.gene71990:CDS | 35.0% | |
| ATGATAACAGACACACATAC+TGG | + | chr8.1:22766959-22766978 | MS.gene71990:CDS | 35.0% | |
| CTTGACTCTACAGATTTCAT+GGG | + | chr8.1:22767617-22767636 | MS.gene71990:intron | 35.0% | |
| CTTGCAAGGAAATTGATGAA+GGG | + | chr8.1:22765903-22765922 | MS.gene71990:CDS | 35.0% | |
| CTTGTTTCGTTCATTGATGA+TGG | - | chr8.1:22765749-22765768 | None:intergenic | 35.0% | |
| GACCTGAAATAGGTAATTTC+TGG | + | chr8.1:22765600-22765619 | MS.gene71990:CDS | 35.0% | |
| GAGAAATTGAAGGGATCAAT+CGG | + | chr8.1:22766797-22766816 | MS.gene71990:CDS | 35.0% | |
| GCATACCTCTTTACAACTTA+CGG | - | chr8.1:22766686-22766705 | None:intergenic | 35.0% | |
| TATGGTCATGAAAACAAAGG+AGG | - | chr8.1:22766575-22766594 | None:intergenic | 35.0% | |
| TCCCAGAAATTACCTATTTC+AGG | - | chr8.1:22765605-22765624 | None:intergenic | 35.0% | |
| TGAAATAGCTACCATTGTTC+CGG | + | chr8.1:22765679-22765698 | MS.gene71990:CDS | 35.0% | |
| TGCAAGTGCAAATACTGTAA+GGG | + | chr8.1:22766430-22766449 | MS.gene71990:CDS | 35.0% | |
| TGCAGTAAGAACATAACCAA+TGG | - | chr8.1:22766414-22766433 | None:intergenic | 35.0% | |
| TTCCACATTTCAACAGTTTG+TGG | - | chr8.1:22768099-22768118 | None:intergenic | 35.0% | |
| TTCGAAGTCTTGAAGTTGAA+AGG | + | chr8.1:22768055-22768074 | MS.gene71990:CDS | 35.0% | |
| TTGAAAATTCGACCGGTTAT+CGG | - | chr8.1:22765959-22765978 | None:intergenic | 35.0% | |
| TTGTTCCGTAAGTTGTAAAG+AGG | + | chr8.1:22766678-22766697 | MS.gene71990:CDS | 35.0% | |
| TTTGCTTAATCGTATAGCTC+CGG | - | chr8.1:22768199-22768218 | None:intergenic | 35.0% | |
| ! | ATAACCGGTCGAATTTTCAA+TGG | + | chr8.1:22765959-22765978 | MS.gene71990:CDS | 35.0% |
| ! | CCTGTATAAAAGCACAAGAA+CGG | - | chr8.1:22766264-22766283 | None:intergenic | 35.0% |
| ! | TATAACCTTTTGATGTTCCC+CGG | + | chr8.1:22768177-22768196 | MS.gene71990:CDS | 35.0% |
| !! | AATTAAGAAGTGCTTACCTG+CGG | - | chr8.1:22767015-22767034 | None:intergenic | 35.0% |
| !! | AGTTTGTGGATTAGATGGAA+TGG | - | chr8.1:22768085-22768104 | None:intergenic | 35.0% |
| !! | ATGTTGATGGAAGAAGCTTT+TGG | + | chr8.1:22766935-22766954 | MS.gene71990:CDS | 35.0% |
| !! | TACTAATCAGGATGTTTTGG+AGG | - | chr8.1:22766102-22766121 | None:intergenic | 35.0% |
| !! | TCAACAGTTTGTGGATTAGA+TGG | - | chr8.1:22768090-22768109 | None:intergenic | 35.0% |
| !! | TGTTGATGGAAGAAGCTTTT+GGG | + | chr8.1:22766936-22766955 | MS.gene71990:CDS | 35.0% |
| AACTGAAACACCTCCATCAT+CGG | + | chr8.1:22765652-22765671 | MS.gene71990:CDS | 40.0% | |
| AATACTCGTTTCCGGAACAA+TGG | - | chr8.1:22765693-22765712 | None:intergenic | 40.0% | |
| ACAAATGGATACGAGAAGTG+AGG | + | chr8.1:22766871-22766890 | MS.gene71990:CDS | 40.0% | |
| ACGCACAAGACCAAATTATG+TGG | + | chr8.1:22765472-22765491 | MS.gene71990:CDS | 40.0% | |
| AGAGGATGAACAAAAACGTC+GGG | + | chr8.1:22766132-22766151 | MS.gene71990:CDS | 40.0% | |
| ATGGGAATGAGAGCTATTCT+TGG | + | chr8.1:22766837-22766856 | MS.gene71990:CDS | 40.0% | |
| CACTTCTCGTATCCATTTGT+TGG | - | chr8.1:22766871-22766890 | None:intergenic | 40.0% | |
| CCATGAAATCTGTAGAGTCA+AGG | - | chr8.1:22767619-22767638 | None:intergenic | 40.0% | |
| CCTTGACTCTACAGATTTCA+TGG | + | chr8.1:22767616-22767635 | MS.gene71990:intron | 40.0% | |
| CTGCAAGTGCAAATACTGTA+AGG | + | chr8.1:22766429-22766448 | MS.gene71990:CDS | 40.0% | |
| GCAACCATACAAACGCATTT+CGG | + | chr8.1:22766057-22766076 | MS.gene71990:CDS | 40.0% | |
| GTGGAAAAGGAGAAGATGAA+GGG | + | chr8.1:22766200-22766219 | MS.gene71990:CDS | 40.0% | |
| TCATGAAAACAAAGGAGGTG+AGG | - | chr8.1:22766570-22766589 | None:intergenic | 40.0% | |
| TCCATTGGCAAACTTTGTTC+CGG | - | chr8.1:22765719-22765738 | None:intergenic | 40.0% | |
| TCCGGAAACGAGTATTAATC+CGG | + | chr8.1:22765697-22765716 | MS.gene71990:CDS | 40.0% | |
| TCCGGATTAATACTCGTTTC+CGG | - | chr8.1:22765701-22765720 | None:intergenic | 40.0% | |
| TGAAGGGTTAGAAGCAAACT+GGG | + | chr8.1:22765532-22765551 | MS.gene71990:CDS | 40.0% | |
| TGCTTAGATCAAATCTGAGG+AGG | + | chr8.1:22767373-22767392 | MS.gene71990:intron | 40.0% | |
| TGGAAAAGGAGAAGATGAAG+GGG | + | chr8.1:22766201-22766220 | MS.gene71990:CDS | 40.0% | |
| TGGAAAGAGGACATACCTTA+CGG | - | chr8.1:22767463-22767482 | None:intergenic | 40.0% | |
| TGTGGAAAAGGAGAAGATGA+AGG | + | chr8.1:22766199-22766218 | MS.gene71990:CDS | 40.0% | |
| TTGAAGGGTTAGAAGCAAAC+TGG | + | chr8.1:22765531-22765550 | MS.gene71990:CDS | 40.0% | |
| TTGCTTAATCGTATAGCTCC+GGG | - | chr8.1:22768198-22768217 | None:intergenic | 40.0% | |
| ! | ACTTACACTGCTTGTTGCAT+TGG | - | chr8.1:22766495-22766514 | None:intergenic | 40.0% |
| ! | ATTTCATTCACCGATGATGG+AGG | - | chr8.1:22765665-22765684 | None:intergenic | 40.0% |
| ! | CAAGCAGTGTAAGTTTTCTC+CGG | + | chr8.1:22766501-22766520 | MS.gene71990:intron | 40.0% |
| ! | CCGTTCTTGTGCTTTTATAC+AGG | + | chr8.1:22766261-22766280 | MS.gene71990:CDS | 40.0% |
| ! | GCTATTTCATTCACCGATGA+TGG | - | chr8.1:22765668-22765687 | None:intergenic | 40.0% |
| ! | TATACTGCAGGGTTTTTCTC+AGG | + | chr8.1:22766378-22766397 | MS.gene71990:intron | 40.0% |
| ! | TTCTCGTATCCATTTGTTGG+AGG | - | chr8.1:22766868-22766887 | None:intergenic | 40.0% |
| !! | CTCTTCTACAAGGAGTGTTA+TGG | - | chr8.1:22767870-22767889 | None:intergenic | 40.0% |
| !! | GATGATGGAACTGTTTCCAT+TGG | - | chr8.1:22765734-22765753 | None:intergenic | 40.0% |
| !!! | AATCAGGATGTTTTGGAGGA+AGG | - | chr8.1:22766098-22766117 | None:intergenic | 40.0% |
| !!! | TTATCGGTTTTTCCCCATCA+TGG | - | chr8.1:22765943-22765962 | None:intergenic | 40.0% |
| ACAAGAACGGTGATAAGTGG+AGG | - | chr8.1:22766251-22766270 | None:intergenic | 45.0% | |
| ACCATACAAACGCATTTCGG+TGG | + | chr8.1:22766060-22766079 | MS.gene71990:CDS | 45.0% | |
| AGCACAAGAACGGTGATAAG+TGG | - | chr8.1:22766254-22766273 | None:intergenic | 45.0% | |
| AGCATGGTTGACAACTTGCA+AGG | + | chr8.1:22765889-22765908 | MS.gene71990:CDS | 45.0% | |
| AGTTGTCAACCATGCTAGGA+TGG | - | chr8.1:22765885-22765904 | None:intergenic | 45.0% | |
| CAAGAACGGTGATAAGTGGA+GGG | - | chr8.1:22766250-22766269 | None:intergenic | 45.0% | |
| CGTAGACCAAGACCTGAAAT+AGG | + | chr8.1:22765590-22765609 | MS.gene71990:CDS | 45.0% | |
| CTCAGGAAAACGACAACCAT+TGG | + | chr8.1:22766395-22766414 | MS.gene71990:CDS | 45.0% | |
| CTGGACTTGAATGAGCCATT+CGG | + | chr8.1:22768228-22768247 | MS.gene71990:CDS | 45.0% | |
| GAAGCAAACTGGGAAAAACC+AGG | + | chr8.1:22765542-22765561 | MS.gene71990:CDS | 45.0% | |
| GATGGGGAAAAACCGATAAC+CGG | + | chr8.1:22765944-22765963 | MS.gene71990:CDS | 45.0% | |
| GGAAAAGGAGAAGATGAAGG+GGG | + | chr8.1:22766202-22766221 | MS.gene71990:CDS | 45.0% | |
| GGCTCCATTGAAAATTCGAC+CGG | - | chr8.1:22765966-22765985 | None:intergenic | 45.0% | |
| GTATCGGGTGTCTAACAAAG+TGG | + | chr8.1:22767152-22767171 | MS.gene71990:intron | 45.0% | |
| GTCGCAACAGCTACATAAGA+TGG | - | chr8.1:22765987-22766006 | None:intergenic | 45.0% | |
| TAATTGCTGCAGCTACCGTA+AGG | + | chr8.1:22767445-22767464 | MS.gene71990:CDS | 45.0% | |
| TCCGGAACAAAGTTTGCCAA+TGG | + | chr8.1:22765715-22765734 | MS.gene71990:CDS | 45.0% | |
| TGAAAACAAAGGAGGTGAGG+TGG | - | chr8.1:22766567-22766586 | None:intergenic | 45.0% | |
| TGCAAGTTGTCAACCATGCT+AGG | - | chr8.1:22765889-22765908 | None:intergenic | 45.0% | |
| TGCTTAATCGTATAGCTCCG+GGG | - | chr8.1:22768197-22768216 | None:intergenic | 45.0% | |
| TGGACTTGAATGAGCCATTC+GGG | + | chr8.1:22768229-22768248 | MS.gene71990:CDS | 45.0% | |
| TTGGAGAGTCCTCCAACAAA+TGG | + | chr8.1:22766856-22766875 | MS.gene71990:CDS | 45.0% | |
| ! | AGAGTGTTCTATACAACCGC+AGG | + | chr8.1:22766996-22767015 | MS.gene71990:CDS | 45.0% |
| ! | CTGTAAGGGTGATGATGAAG+AGG | + | chr8.1:22766444-22766463 | MS.gene71990:CDS | 45.0% |
| ! | TACACTGCTTGTTGCATTGG+CGG | - | chr8.1:22766492-22766511 | None:intergenic | 45.0% |
| ! | TATATTTGGTTGGTGCGGTG+CGG | - | chr8.1:22767071-22767090 | None:intergenic | 45.0% |
| !!! | TTGAAATTTTATTTTTTTTT+GGG | - | chr8.1:22767331-22767350 | None:intergenic | 5.0% |
| AACGCATTTCGGTGGCAAAG+CGG | + | chr8.1:22766068-22766087 | MS.gene71990:CDS | 50.0% | |
| AGAAACTCCAAGCGCAACAG+CGG | + | chr8.1:22765817-22765836 | MS.gene71990:CDS | 50.0% | |
| CACACATACTGGCGTCAATG+TGG | + | chr8.1:22766970-22766989 | MS.gene71990:CDS | 50.0% | |
| CTTATGTAGCTGTTGCGACG+AGG | + | chr8.1:22765988-22766007 | MS.gene71990:CDS | 50.0% | |
| GCCACCGAAATGCGTTTGTA+TGG | - | chr8.1:22766064-22766083 | None:intergenic | 50.0% | |
| GCCTCATCTGTGGCAATGAA+AGG | - | chr8.1:22767661-22767680 | None:intergenic | 50.0% | |
| GCCTTTCATTGCCACAGATG+AGG | + | chr8.1:22767657-22767676 | MS.gene71990:CDS | 50.0% | |
| GCGACGAGGAAATCTCTGTA+TGG | + | chr8.1:22766002-22766021 | MS.gene71990:CDS | 50.0% | |
| GGAAATTGATGAAGGGACCG+AGG | + | chr8.1:22765910-22765929 | MS.gene71990:CDS | 50.0% | |
| GGACTTGAATGAGCCATTCG+GGG | + | chr8.1:22768230-22768249 | MS.gene71990:CDS | 50.0% | |
| TAGCTCCGGGGAACATCAAA+AGG | - | chr8.1:22768185-22768204 | None:intergenic | 50.0% | |
| TCGGGTGTCTAACAAAGTGG+AGG | + | chr8.1:22767155-22767174 | MS.gene71990:intron | 50.0% | |
| TGCAGCTGCTTGCATGTTGA+TGG | + | chr8.1:22766922-22766941 | MS.gene71990:CDS | 50.0% | |
| TGGCGGCACATGATGTCTAA+AGG | - | chr8.1:22766475-22766494 | None:intergenic | 50.0% | |
| TTAGGCTCAACATCCCCGAA+TGG | - | chr8.1:22768246-22768265 | None:intergenic | 50.0% | |
| AAACTCCAAGCGCAACAGCG+GGG | + | chr8.1:22765819-22765838 | MS.gene71990:CDS | 55.0% | |
| ACCGAGGTGCGTTACCATGA+TGG | + | chr8.1:22765926-22765945 | MS.gene71990:CDS | 55.0% | |
| AGGAGGTGAGGTGGATGAGT+AGG | - | chr8.1:22766558-22766577 | None:intergenic | 55.0% | |
| CCGAGGTGCGTTACCATGAT+GGG | + | chr8.1:22765927-22765946 | MS.gene71990:CDS | 55.0% | |
| CGAGGTGCGTTACCATGATG+GGG | + | chr8.1:22765928-22765947 | MS.gene71990:CDS | 55.0% | |
| GAAACTCCAAGCGCAACAGC+GGG | + | chr8.1:22765818-22765837 | MS.gene71990:CDS | 55.0% | |
| GCCACAGATGAGGCATACAG+AGG | + | chr8.1:22767667-22767686 | MS.gene71990:CDS | 55.0% | |
| GCCTCTGTATGCCTCATCTG+TGG | - | chr8.1:22767671-22767690 | None:intergenic | 55.0% | |
| GGAGGTGAGGTGGATGAGTA+GGG | - | chr8.1:22766557-22766576 | None:intergenic | 55.0% | |
| TGGGAAAAACCAGGTCGACG+AGG | + | chr8.1:22765551-22765570 | MS.gene71990:CDS | 55.0% | |
| ! | CCCATCATGGTAACGCACCT+CGG | - | chr8.1:22765930-22765949 | None:intergenic | 55.0% |
| AACCAGGTCGACGAGGTCGA+CGG | + | chr8.1:22765558-22765577 | MS.gene71990:CDS | 60.0% | |
| GAAGTCCCCGCTGTTGCGCT+TGG | - | chr8.1:22765827-22765846 | None:intergenic | 65.0% | |
| GACCGTCGACCTCGTCGACC+TGG | - | chr8.1:22765563-22765582 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 22765452 | 22768278 | 22765452 | ID=MS.gene71990 |
| chr8.1 | mRNA | 22765452 | 22768278 | 22765452 | ID=MS.gene71990.t1;Parent=MS.gene71990 |
| chr8.1 | exon | 22765452 | 22766282 | 22765452 | ID=MS.gene71990.t1.exon1;Parent=MS.gene71990.t1 |
| chr8.1 | CDS | 22765452 | 22766282 | 22765452 | ID=cds.MS.gene71990.t1;Parent=MS.gene71990.t1 |
| chr8.1 | exon | 22766388 | 22766508 | 22766388 | ID=MS.gene71990.t1.exon2;Parent=MS.gene71990.t1 |
| chr8.1 | CDS | 22766388 | 22766508 | 22766388 | ID=cds.MS.gene71990.t1;Parent=MS.gene71990.t1 |
| chr8.1 | exon | 22766629 | 22766699 | 22766629 | ID=MS.gene71990.t1.exon3;Parent=MS.gene71990.t1 |
| chr8.1 | CDS | 22766629 | 22766699 | 22766629 | ID=cds.MS.gene71990.t1;Parent=MS.gene71990.t1 |
| chr8.1 | exon | 22766791 | 22767017 | 22766791 | ID=MS.gene71990.t1.exon4;Parent=MS.gene71990.t1 |
| chr8.1 | CDS | 22766791 | 22767017 | 22766791 | ID=cds.MS.gene71990.t1;Parent=MS.gene71990.t1 |
| chr8.1 | exon | 22767380 | 22767466 | 22767380 | ID=MS.gene71990.t1.exon5;Parent=MS.gene71990.t1 |
| chr8.1 | CDS | 22767380 | 22767466 | 22767380 | ID=cds.MS.gene71990.t1;Parent=MS.gene71990.t1 |
| chr8.1 | exon | 22767630 | 22767729 | 22767630 | ID=MS.gene71990.t1.exon6;Parent=MS.gene71990.t1 |
| chr8.1 | CDS | 22767630 | 22767729 | 22767630 | ID=cds.MS.gene71990.t1;Parent=MS.gene71990.t1 |
| chr8.1 | exon | 22768051 | 22768278 | 22768051 | ID=MS.gene71990.t1.exon7;Parent=MS.gene71990.t1 |
| chr8.1 | CDS | 22768051 | 22768278 | 22768051 | ID=cds.MS.gene71990.t1;Parent=MS.gene71990.t1 |
| Gene Sequence |
| Protein sequence |