AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene72027

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72027.t1 MTR_3g110240 97.368 646 14 2 25 669 21 664 0.0 1314
MS.gene72027.t1 MTR_1g007150 86.003 593 79 3 81 669 75 667 0.0 1084
MS.gene72027.t1 MTR_7g006030 78.388 583 116 2 93 669 4 582 0.0 991
MS.gene72027.t1 MTR_1g116210 74.747 594 139 4 83 669 70 659 0.0 950
MS.gene72027.t1 MTR_8g014050 77.157 591 124 3 86 669 88 674 0.0 948
MS.gene72027.t1 MTR_7g085540 74.439 579 139 2 96 669 117 691 0.0 934
MS.gene72027.t1 MTR_4g126010 39.927 273 153 5 126 395 9 273 1.08e-59 207
MS.gene72027.t1 MTR_2g099670 38.828 273 156 5 126 395 9 273 2.33e-58 204
MS.gene72027.t1 MTR_2g039930 38.828 273 156 5 126 395 9 273 1.92e-57 202
MS.gene72027.t1 MTR_1g042280 38.710 279 158 6 120 395 6 274 1.75e-56 199
MS.gene72027.t1 MTR_7g097160 38.828 273 156 5 126 395 9 273 2.19e-56 199
MS.gene72027.t1 MTR_1g075870 38.710 279 158 6 120 395 6 274 2.37e-56 194
MS.gene72027.t1 MTR_8g018310 38.951 267 151 6 126 389 9 266 2.43e-56 199
MS.gene72027.t1 MTR_8g018310 38.951 267 151 6 126 389 9 266 4.54e-56 196
MS.gene72027.t1 MTR_1g075870 38.710 279 158 6 120 395 6 274 1.64e-55 196
MS.gene72027.t1 MTR_1g069720 37.276 279 162 6 120 395 5 273 4.17e-54 192
MS.gene72027.t1 MTR_0492s0030 38.163 283 160 6 118 395 3 275 2.21e-53 188
MS.gene72027.t1 MTR_0543s0020 38.163 283 160 6 118 395 3 275 2.21e-53 188
MS.gene72027.t1 MTR_8g102930 37.993 279 160 6 120 395 5 273 3.66e-53 189
MS.gene72027.t1 MTR_1g004990 37.102 283 164 7 116 395 2 273 6.25e-53 188
MS.gene72027.t1 MTR_6g087070 36.630 273 162 5 126 395 9 273 1.14e-52 187
MS.gene72027.t1 MTR_3g110180 36.201 279 165 6 120 395 5 273 3.42e-52 186
MS.gene72027.t1 MTR_3g110180 36.201 279 164 7 120 395 5 272 1.29e-50 182
MS.gene72027.t1 MTR_1g042280 39.823 226 130 3 173 395 20 242 5.47e-50 177
MS.gene72027.t1 MTR_2g099670 40.376 213 121 3 186 395 12 221 8.27e-48 174
MS.gene72027.t1 MTR_1g075870 39.908 218 125 3 181 395 3 217 4.92e-47 168
MS.gene72027.t1 MTR_2g039930 41.026 195 109 3 204 395 1 192 6.52e-42 157
MS.gene72027.t1 MTR_1g116205 65.049 103 29 3 83 178 70 172 1.44e-33 127
MS.gene72027.t1 MTR_7g097160 43.511 131 70 2 268 395 25 154 1.17e-27 115
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72027.t1 AT2G25760 75.480 677 137 8 1 669 1 656 0.0 1060
MS.gene72027.t1 AT2G25760 74.853 680 139 9 1 669 1 659 0.0 1050
MS.gene72027.t1 AT3G13670 70.103 679 179 7 1 669 22 686 0.0 985
MS.gene72027.t1 AT3G03940 73.064 594 149 3 83 669 95 684 0.0 934
MS.gene72027.t1 AT5G18190 73.390 590 146 3 87 669 89 674 0.0 933
MS.gene72027.t1 AT5G18190 73.390 590 146 3 87 669 89 674 0.0 933
MS.gene72027.t1 AT3G03930 69.432 229 69 1 442 669 43 271 8.62e-111 336
MS.gene72027.t1 AT4G26100 39.194 273 155 5 126 395 9 273 1.31e-58 204
MS.gene72027.t1 AT2G19470 39.560 273 154 5 126 395 9 273 5.67e-58 202
MS.gene72027.t1 AT3G23340 39.427 279 156 6 120 395 5 273 6.76e-58 202
MS.gene72027.t1 AT1G03930 38.790 281 159 6 118 395 3 273 8.38e-58 203
MS.gene72027.t1 AT1G72710 39.194 273 154 6 126 395 9 272 6.67e-57 200
MS.gene72027.t1 AT5G57015 38.462 273 157 5 126 395 9 273 9.98e-57 199
MS.gene72027.t1 AT5G44100 37.367 281 163 6 118 395 3 273 1.05e-56 200
MS.gene72027.t1 AT5G44100 37.367 281 163 6 118 395 3 273 1.05e-56 200
MS.gene72027.t1 AT4G14340 39.068 279 157 6 120 395 11 279 1.28e-56 196
MS.gene72027.t1 AT4G14340 39.068 279 157 6 120 395 11 279 1.81e-56 199
MS.gene72027.t1 AT4G28540 37.993 279 160 6 120 395 9 277 1.23e-55 197
MS.gene72027.t1 AT5G43320 39.068 279 157 6 120 395 5 273 1.43e-55 197
MS.gene72027.t1 AT5G43320 39.068 279 157 6 120 395 5 273 9.14e-55 192
MS.gene72027.t1 AT5G43320 39.068 279 157 6 120 395 5 273 9.14e-55 192
MS.gene72027.t1 AT4G28860 37.993 279 160 6 120 395 5 273 1.60e-54 191
MS.gene72027.t1 AT1G04440 37.993 279 160 6 120 395 5 273 2.42e-54 193
MS.gene72027.t1 AT4G28860 37.993 279 160 6 120 395 5 273 4.98e-54 191
MS.gene72027.t1 AT4G28880 38.351 279 159 6 120 395 5 273 1.02e-53 190
MS.gene72027.t1 AT4G28880 38.351 279 159 6 120 395 5 273 1.02e-53 190
MS.gene72027.t1 AT4G28880 38.351 279 159 6 120 395 5 273 1.02e-53 190
MS.gene72027.t1 AT4G28880 38.351 279 159 6 120 395 5 273 1.02e-53 190
MS.gene72027.t1 AT3G23340 38.697 261 149 5 138 395 7 259 6.33e-51 183
MS.gene72027.t1 AT4G08800 34.066 273 137 6 126 395 9 241 1.32e-42 155

Find 188 sgRNAs with CRISPR-Local

Find 375 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTGAGCACCCTCGGTATTT+AGG 0.209029 3.4:-95550516 None:intergenic
CCCATTCGGACCTTCTTCTT+TGG 0.219272 3.4:-95550696 None:intergenic
GACCCACAATTCCATCAAAA+AGG 0.232071 3.4:-95550474 None:intergenic
CTGAGCACCCTCGGTATTTA+GGG 0.247642 3.4:-95550515 None:intergenic
CTTTCCCAACACATTGTAAA+AGG 0.251961 3.4:+95550882 MS.gene72027:CDS
TGGCTTCTTGTGCTAGTCTT+TGG 0.253271 3.4:+95550934 MS.gene72027:CDS
AAGCTTGGGAAGGGAGGATT+TGG 0.257494 3.4:+95547846 MS.gene72027:CDS
AGGGGCCTAATTGCAGGATT+TGG 0.258837 3.4:-95550496 None:intergenic
TGTTTCACAGGAATGGATTA+TGG 0.259630 3.4:+95551150 MS.gene72027:intron
ATCAACGCCCAGATGTATTT+AGG 0.259852 3.4:+95549975 MS.gene72027:CDS
CTTCTGCCTCCGATTCCTTC+TGG 0.270294 3.4:-95547346 None:intergenic
AAACGAGTCACTGACTTTAT+AGG 0.282911 3.4:-95551407 None:intergenic
GGCTTCTTGTGCTAGTCTTT+GGG 0.284395 3.4:+95550935 MS.gene72027:CDS
ATATGCTTGGCTCTAGTCTA+TGG 0.295213 3.4:+95548529 MS.gene72027:CDS
TGGCCACTGCTGGCACTAGA+TGG 0.300589 3.4:+95551482 MS.gene72027:CDS
TATAGGATTGTTGCATGTAT+TGG 0.306085 3.4:-95551390 None:intergenic
GCTCAAAACCTTTGTTTCAT+TGG 0.309003 3.4:-95550762 None:intergenic
TAAGAAGAAGGCAGTGGTTA+GGG 0.314293 3.4:+95547470 MS.gene72027:CDS
GCTCTAGTCTATGGGATGTT+TGG 0.316967 3.4:+95548538 MS.gene72027:CDS
GTATTTAGGGGCCTAATTGC+AGG 0.321688 3.4:-95550502 None:intergenic
TTCGGCTCCCGGAGCTTTAT+CGG 0.329884 3.4:-95547541 None:intergenic
ATAGGATTGTTGCATGTATT+GGG 0.335579 3.4:-95551389 None:intergenic
TTTCTGGTTGATCTTGGATT+AGG 0.337171 3.4:+95549831 MS.gene72027:CDS
ACCAACCTTGTGAAGAAAAC+TGG 0.342759 3.4:-95551012 None:intergenic
TAGTCTTTGGGCACTCATTA+TGG 0.347322 3.4:+95550947 MS.gene72027:CDS
GTGAATAACGACGACGAAAC+AGG 0.354236 3.4:+95547414 MS.gene72027:CDS
ACACTAATCCACTGTGTTGC+TGG 0.363197 3.4:-95550723 None:intergenic
GTTACCTTGGCAAGGATATC+AGG 0.363733 3.4:+95550193 MS.gene72027:CDS
TTCCTATCTAATCTATATAA+TGG 0.369860 3.4:-95547825 None:intergenic
CTCCCTTCTTCTTCGGCTCC+CGG 0.370094 3.4:-95547552 None:intergenic
AGAACAAACCTAAATACATC+TGG 0.381852 3.4:-95549983 None:intergenic
TTGTTACAGGGAGAAAATAA+AGG 0.383335 3.4:+95550313 MS.gene72027:intron
GCAAGGTGACTACTACATTA+TGG 0.384482 3.4:+95548418 MS.gene72027:CDS
CTCATTATGGATGCTGGCAC+TGG 0.386456 3.4:+95550960 MS.gene72027:CDS
AACAGCAAAGGGTGCAATTA+CGG 0.391275 3.4:+95548221 MS.gene72027:CDS
TATAGATTAGATAGGAAGCT+TGG 0.395411 3.4:+95547831 MS.gene72027:CDS
ATAAGAAGAAGGCAGTGGTT+AGG 0.397165 3.4:+95547469 MS.gene72027:CDS
AACTTCTTGCTTGGACCCTC+AGG 0.399502 3.4:+95549786 MS.gene72027:CDS
CGCCGCCGGTCGCCGGCGGG+AGG 0.407045 3.4:+95547295 MS.gene72027:CDS
ACGCGCCGCCGGTCGCCGGC+GGG 0.411110 3.4:+95547292 MS.gene72027:CDS
GTGACTCGTTTCCATTTAAG+TGG 0.412212 3.4:+95551419 MS.gene72027:CDS
AGTTGTACTCCCTTCTTCTT+CGG 0.412608 3.4:-95547559 None:intergenic
AAGTTGTTTCTGGTTGATCT+TGG 0.425523 3.4:+95549825 MS.gene72027:CDS
CTCCATTATATAGATTAGAT+AGG 0.426261 3.4:+95547823 MS.gene72027:CDS
GGAATCAAAATCACCTTCTC+AGG 0.426563 3.4:-95547588 None:intergenic
TGGGTCCAAATCCTGCAATT+AGG 0.429104 3.4:+95550491 MS.gene72027:CDS
ATTGTTATGTCCCGTGGTGC+TGG 0.431009 3.4:+95551508 MS.gene72027:CDS
CGACGCGTAGGAGCTGGTTC+TGG 0.431637 3.4:+95547885 MS.gene72027:CDS
GATAGGAAGCTTGGGAAGGG+AGG 0.432226 3.4:+95547840 MS.gene72027:CDS
TTCTTCGTGGTCGGTTACCT+TGG 0.433456 3.4:+95550180 MS.gene72027:CDS
ACTCTTGTCTTCCTTCTTCG+TGG 0.435712 3.4:+95550167 MS.gene72027:CDS
CAAAAGCAACACAAAGCTTC+GGG 0.436504 3.4:-95550370 None:intergenic
AACGCGCCGCCGGTCGCCGG+CGG 0.437647 3.4:+95547291 MS.gene72027:CDS
GTCACTGCTATGGCCACTGC+TGG 0.440107 3.4:+95551472 MS.gene72027:CDS
AGCGTTTCTTGAGTTTCATC+AGG 0.442256 3.4:-95551768 None:intergenic
TGTTGTGAAGCTTATATGTC+AGG 0.445999 3.4:+95550623 MS.gene72027:intron
ACAAAAGCAACACAAAGCTT+CGG 0.446009 3.4:-95550371 None:intergenic
AAAATAAAAGCAGCTTGATC+AGG 0.446910 3.4:-95551723 None:intergenic
AAGCCTGAAAACTTCTTGCT+TGG 0.452042 3.4:+95549777 MS.gene72027:CDS
CTGTGCGGAGGTGGCAGCGA+CGG 0.453735 3.4:-95547322 None:intergenic
CGTTGGCGTGATAGTTCAAC+TGG 0.453748 3.4:+95549935 MS.gene72027:CDS
TTTACCTTAACATGAGTACT+AGG 0.455799 3.4:-95551807 None:intergenic
TATTACATCAGTGCCATAGC+TGG 0.456706 3.4:+95551190 MS.gene72027:CDS
GTTGGCCGACGCGTAGGAGC+TGG 0.466210 3.4:+95547879 MS.gene72027:CDS
CCTTCTGGTCTGTGCGGAGG+TGG 0.467726 3.4:-95547331 None:intergenic
AAAATCACCTTCTCAGGAAG+TGG 0.470398 3.4:-95547582 None:intergenic
CTCCTCCCGCCGGCGACCGG+CGG 0.471128 3.4:-95547297 None:intergenic
TTCTCATCAGGGGTTCCTGA+GGG 0.471639 3.4:-95549801 None:intergenic
GCTCTCCTCCCGCCGGCGAC+CGG 0.471790 3.4:-95547300 None:intergenic
TGGGCACTCATTATGGATGC+TGG 0.472875 3.4:+95550954 MS.gene72027:CDS
AGCTAGTAACGGGTCCTCAT+TGG 0.474983 3.4:+95551213 MS.gene72027:CDS
ATCTAGGATGTCTACTGAAA+TGG 0.475531 3.4:+95548675 MS.gene72027:intron
CGAGGTCGGGTACGCAACTC+AGG 0.476552 3.4:-95547249 None:intergenic
GATAACGCGCCGCCGGTCGC+CGG 0.478774 3.4:+95547288 MS.gene72027:CDS
TCATTGGTTGTAATGTCAAA+AGG 0.480800 3.4:+95551229 MS.gene72027:CDS
AGCTTGGGAAGGGAGGATTT+GGG 0.483807 3.4:+95547847 MS.gene72027:CDS
CTACATATTCTACAAACTGC+CGG 0.484853 3.4:-95550405 None:intergenic
ATTGTAAAAGGAAATGAAGA+TGG 0.488040 3.4:+95550894 MS.gene72027:CDS
ATAGATTAGATAGGAAGCTT+GGG 0.491550 3.4:+95547832 MS.gene72027:CDS
TTGTCTTCCTTCTTCGTGGT+CGG 0.491837 3.4:+95550171 MS.gene72027:CDS
CTCTGTAAATCCAGCACCAC+GGG 0.494784 3.4:-95551518 None:intergenic
TTCATCATCATCCTCTTCCA+TGG 0.494964 3.4:-95550670 None:intergenic
GTGTTGCTGGCTGACCCATT+CGG 0.496471 3.4:-95550710 None:intergenic
TTAGATAGGAAGCTTGGGAA+GGG 0.503149 3.4:+95547837 MS.gene72027:CDS
CGTAGTGCCGATAAAGCTCC+GGG 0.503731 3.4:+95547534 MS.gene72027:CDS
GCTCCGGGAGCCGAAGAAGA+AGG 0.504739 3.4:+95547549 MS.gene72027:CDS
CCGTAGTGCCGATAAAGCTC+CGG 0.505206 3.4:+95547533 MS.gene72027:CDS
GGAAGGAGAGAATAAGAAGA+AGG 0.510183 3.4:+95547458 MS.gene72027:CDS
CCATAGCTGGAGCTAGTAAC+GGG 0.513636 3.4:+95551203 MS.gene72027:CDS
TTTCTCATCAGGGGTTCCTG+AGG 0.514375 3.4:-95549802 None:intergenic
ATTAGATAGGAAGCTTGGGA+AGG 0.514540 3.4:+95547836 MS.gene72027:CDS
CCGCACAGACCAGAAGGAAT+CGG 0.524898 3.4:+95547337 MS.gene72027:CDS
GCTATGGATGAGTACGATAG+TGG 0.525051 3.4:+95547507 MS.gene72027:CDS
CTTCGATGAATACCTTCACT+AGG 0.528484 3.4:-95551660 None:intergenic
GGATTTGGGCAAGTCTATGT+TGG 0.531558 3.4:+95547861 MS.gene72027:CDS
GAATACCTTCACTAGGGTAC+AGG 0.532543 3.4:-95551653 None:intergenic
CCAAAGAAGAAGGTCCGAAT+GGG 0.533192 3.4:+95550696 MS.gene72027:CDS
TAATTACAGATTCAAGTTGG+TGG 0.534253 3.4:+95547798 MS.gene72027:intron
AGGACGATTGACCATGGAAG+AGG 0.534909 3.4:+95550659 MS.gene72027:CDS
ATTACGGACCTCCACATGAA+TGG 0.537264 3.4:+95548237 MS.gene72027:CDS
TCTTAATTACAGATTCAAGT+TGG 0.538540 3.4:+95547795 MS.gene72027:intron
ACAAACTGCCGGAAAGGTGC+AGG 0.538874 3.4:-95550394 None:intergenic
TATGCTTGGCTCTAGTCTAT+GGG 0.539645 3.4:+95548530 MS.gene72027:CDS
AGCTGGTTCTGGTGCCGTTG+AGG 0.543472 3.4:+95547896 MS.gene72027:CDS
GGTTTCTAGAGAGGAAGCTA+TGG 0.545782 3.4:+95547491 MS.gene72027:CDS
GAGACGGTTTATGCGAGGTC+GGG 0.546267 3.4:-95547262 None:intergenic
CGGACCTCCACATGAATGGC+AGG 0.546511 3.4:+95548241 MS.gene72027:CDS
TGGTGCTGGATTTACAGAGC+AGG 0.546908 3.4:+95551522 MS.gene72027:CDS
GAGAGATTGAAAGAAGAGGA+AGG 0.548043 3.4:+95547441 MS.gene72027:CDS
GGCCACTGCTGGCACTAGAT+GGG 0.549197 3.4:+95551483 MS.gene72027:CDS
AGAGAATAAGAAGAAGGCAG+TGG 0.549582 3.4:+95547464 MS.gene72027:CDS
GGAAGACAAGAGTGTAAGCA+AGG 0.552460 3.4:-95550157 None:intergenic
AAGGTAACCGACCACGAAGA+AGG 0.552994 3.4:-95550178 None:intergenic
GTGAAGGTATTCATCGAAGG+TGG 0.556433 3.4:+95551664 MS.gene72027:CDS
CTCCGGGAGCCGAAGAAGAA+GGG 0.558776 3.4:+95547550 MS.gene72027:CDS
TGAGCACCCTCGGTATTTAG+GGG 0.558929 3.4:-95550514 None:intergenic
TGATGAACAACCAAAGAAGA+AGG 0.560213 3.4:+95550686 MS.gene72027:CDS
AGTGGTTAGGGTTTCTAGAG+AGG 0.560234 3.4:+95547482 MS.gene72027:CDS
AGGAATGGATTATGGAACAG+TGG 0.562856 3.4:+95551158 MS.gene72027:intron
CGTGGTCGGTTACCTTGGCA+AGG 0.564377 3.4:+95550185 MS.gene72027:CDS
AAATACCGAGGGTGCTCAGA+AGG 0.565005 3.4:+95550519 MS.gene72027:CDS
CACGAGTACATTACAAGGGA+CGG 0.566096 3.4:+95548396 MS.gene72027:CDS
AGTAGAGAGATTGAAAGAAG+AGG 0.566314 3.4:+95547437 MS.gene72027:CDS
GCTAGTGTGCATGCACATCT+TGG 0.567152 3.4:+95550101 MS.gene72027:CDS
AAGTAGCAGGAGAGATGACT+TGG 0.570146 3.4:+95550130 MS.gene72027:CDS
TAGAGAAGATGCATTGTAGA+GGG 0.572443 3.4:+95548731 MS.gene72027:CDS
ACCAAAGAAGAAGGTCCGAA+TGG 0.576715 3.4:+95550695 MS.gene72027:CDS
TATTCTACAAACTGCCGGAA+AGG 0.578047 3.4:-95550400 None:intergenic
CCACCTCCGCACAGACCAGA+AGG 0.578183 3.4:+95547331 MS.gene72027:CDS
GTTTCTTGAGTTTCATCAGG+TGG 0.578812 3.4:-95551765 None:intergenic
ACACAAAGCTTCGGGTGAAG+TGG 0.580070 3.4:-95550362 None:intergenic
ACACAGGTCATGGATATGCT+TGG 0.581027 3.4:+95548516 MS.gene72027:intron
GCCATAGCTGGAGCTAGTAA+CGG 0.586802 3.4:+95551202 MS.gene72027:CDS
GAACAAACCTAAATACATCT+GGG 0.586854 3.4:-95549982 None:intergenic
TGTTCCACGAGTACATTACA+AGG 0.586861 3.4:+95548391 MS.gene72027:CDS
GGAATGGATTATGGAACAGT+GGG 0.588580 3.4:+95551159 MS.gene72027:intron
GTCTATGTTGGCCGACGCGT+AGG 0.589738 3.4:+95547873 MS.gene72027:CDS
ATTCCTTCTGGTCTGTGCGG+AGG 0.591057 3.4:-95547334 None:intergenic
TACAACTCCACTTCCTGAGA+AGG 0.591492 3.4:+95547575 MS.gene72027:CDS
GTGTTGGGAAAGCCGCTCAT+CGG 0.591532 3.4:-95550871 None:intergenic
ATCTTGGTAGAACAAGTAGC+AGG 0.592624 3.4:+95550117 MS.gene72027:CDS
TTAGAGAAGATGCATTGTAG+AGG 0.593386 3.4:+95548730 MS.gene72027:CDS
TGAGACGGTTTATGCGAGGT+CGG 0.596794 3.4:-95547263 None:intergenic
AGCACATTAGGTGGTAGTCA+TGG 0.600563 3.4:+95548368 MS.gene72027:intron
TCTCACTGATAACGCGCCGC+CGG 0.600651 3.4:+95547281 MS.gene72027:CDS
AGCGACGGCTCTCCTCCCGC+CGG 0.600658 3.4:-95547307 None:intergenic
ATAACCTGATATCCTTGCCA+AGG 0.602758 3.4:-95550197 None:intergenic
GTTGATCATAATCAACATGA+AGG 0.605161 3.4:-95549958 None:intergenic
GATTTCCTGTACCCTAGTGA+AGG 0.606757 3.4:+95551648 MS.gene72027:CDS
TGAAGGTATTCATCGAAGGT+GGG 0.610628 3.4:+95551665 MS.gene72027:CDS
CTCGTAGACCAATGAAACAA+AGG 0.611155 3.4:+95550754 MS.gene72027:CDS
TTGTAAACCTGCCATTCATG+TGG 0.611605 3.4:-95548248 None:intergenic
TAGGATGTCTACTGAAATGG+TGG 0.612266 3.4:+95548678 MS.gene72027:intron
TTGAGCATAGAAACAGCAAA+GGG 0.612579 3.4:+95548210 MS.gene72027:CDS
CCCGTTACTAGCTCCAGCTA+TGG 0.614186 3.4:-95551203 None:intergenic
TTTGAGCATAGAAACAGCAA+AGG 0.615974 3.4:+95548209 MS.gene72027:CDS
AAGTACCTTCTGAGCACCCT+CGG 0.619914 3.4:-95550524 None:intergenic
AAAGAGAGGACGATTGACCA+TGG 0.622958 3.4:+95550653 MS.gene72027:CDS
TTCGATGAATACCTTCACTA+GGG 0.624580 3.4:-95551659 None:intergenic
CGTCCCTTGTAATGTACTCG+TGG 0.624983 3.4:-95548395 None:intergenic
GGTGGCATGTATTGCAATCG+AGG 0.627258 3.4:+95548696 MS.gene72027:CDS
CCGGAGCTTTATCGGCACTA+CGG 0.627559 3.4:-95547533 None:intergenic
TAAACCTGCCATTCATGTGG+AGG 0.628206 3.4:-95548245 None:intergenic
GTACATTACAAGGGACGGCA+AGG 0.629460 3.4:+95548401 MS.gene72027:CDS
GTGAAGCTTATATGTCAGGT+TGG 0.629643 3.4:+95550627 MS.gene72027:intron
ATTACAATGTGGCCGATGAG+CGG 0.631315 3.4:+95550859 MS.gene72027:CDS
TGCCCATCTAGTGCCAGCAG+TGG 0.632198 3.4:-95551485 None:intergenic
GCGGCGCGTTATCAGTGAGA+CGG 0.633560 3.4:-95547278 None:intergenic
TGTTGTTGCAGATATGTGCA+TGG 0.634497 3.4:+95549747 MS.gene72027:intron
TTGCAGCAGTTGCAGTAATG+CGG 0.640610 3.4:-95551698 None:intergenic
GAAGACAAGAGTGTAAGCAA+GGG 0.642697 3.4:-95550156 None:intergenic
CTAGTGAAGGTATTCATCGA+AGG 0.644295 3.4:+95551661 MS.gene72027:CDS
TGGGCAATTGTTATGTCCCG+TGG 0.648130 3.4:+95551502 MS.gene72027:CDS
TACTAGGAAAATCAGACGTG+CGG 0.651938 3.4:-95551791 None:intergenic
TGGTTTATTTATTAGCAGTG+TGG 0.653080 3.4:+95550914 MS.gene72027:CDS
CACAGACCAGAAGGAATCGG+AGG 0.657377 3.4:+95547340 MS.gene72027:CDS
CCGATTCCTTCTGGTCTGTG+CGG 0.658403 3.4:-95547337 None:intergenic
AAACACCGTACATACCTCAA+CGG 0.667251 3.4:-95547910 None:intergenic
TGTCAGGTTGGACAAAAGAG+AGG 0.668670 3.4:+95550639 MS.gene72027:CDS
ATGGATGAGTACGATAGTGG+TGG 0.670453 3.4:+95547510 MS.gene72027:CDS
CAGAACCAGCTCCTACGCGT+CGG 0.671406 3.4:-95547884 None:intergenic
GCTCTGTAAATCCAGCACCA+CGG 0.673158 3.4:-95551519 None:intergenic
TCAGTGAGACGGTTTATGCG+AGG 0.681265 3.4:-95547267 None:intergenic
AATTAGGCCCCTAAATACCG+AGG 0.683589 3.4:+95550507 MS.gene72027:CDS
ATTAGGCCCCTAAATACCGA+GGG 0.712494 3.4:+95550508 MS.gene72027:CDS
TGGGTCAGCCAGCAACACAG+TGG 0.714696 3.4:+95550715 MS.gene72027:CDS
GCGTAGGTATCATTACAATG+TGG 0.721199 3.4:+95550848 MS.gene72027:intron
GTTCCACGAGTACATTACAA+GGG 0.736863 3.4:+95548392 MS.gene72027:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAACTTTATAAAATGTA+AGG + chr3.4:95548035-95548054 MS.gene72027:intron 10.0%
!! AAAAACTTTATAAAATGTAA+GGG + chr3.4:95548036-95548055 MS.gene72027:intron 10.0%
!! ATAATAAATATAATATAACC+AGG - chr3.4:95548770-95548789 None:intergenic 10.0%
!! TTATTTATGCAAAAATAAAT+CGG + chr3.4:95548980-95548999 MS.gene72027:intron 10.0%
!!! AAGTTTTTTAATAAAGTAAT+GGG + chr3.4:95548452-95548471 MS.gene72027:intron 10.0%
!!! TAAGTTTTTTAATAAAGTAA+TGG + chr3.4:95548451-95548470 MS.gene72027:intron 10.0%
!!! TGAATTTTTTAATTTTGTAA+GGG + chr3.4:95547985-95548004 MS.gene72027:intron 10.0%
!! ATCTATTATATTACTAACAT+TGG - chr3.4:95549641-95549660 None:intergenic 15.0%
!! TATTTAAATCAATGTATGTA+TGG + chr3.4:95550027-95550046 MS.gene72027:intron 15.0%
!!! AGTTTTTTAATAAAGTAATG+GGG + chr3.4:95548453-95548472 MS.gene72027:intron 15.0%
!!! CTGAATTTTTTAATTTTGTA+AGG + chr3.4:95547984-95548003 MS.gene72027:intron 15.0%
!!! TACATACATTGATTTAAATA+AGG - chr3.4:95550027-95550046 None:intergenic 15.0%
!!! TTGTTACATAATATTTTAGT+TGG + chr3.4:95548008-95548027 MS.gene72027:intron 15.0%
!! AAAATATAGAAAGTCAAAAC+TGG - chr3.4:95550827-95550846 None:intergenic 20.0%
!! AAATATAGAAAGTCAAAACT+GGG - chr3.4:95550826-95550845 None:intergenic 20.0%
!! AAGAACAAAAACAAATTTGA+GGG - chr3.4:95549548-95549567 None:intergenic 20.0%
!! ATTTAATTGAGATACAGTAA+TGG - chr3.4:95549345-95549364 None:intergenic 20.0%
!! TCTTGATGCATTATATATTT+AGG + chr3.4:95551264-95551283 MS.gene72027:intron 20.0%
!! TGATTAAATAACATTGTTGT+GGG + chr3.4:95548104-95548123 MS.gene72027:intron 20.0%
!! TTCCTATCTAATCTATATAA+TGG - chr3.4:95547828-95547847 None:intergenic 20.0%
!!! AGTTTTGACTTTCTATATTT+TGG + chr3.4:95550826-95550845 MS.gene72027:intron 20.0%
!!! CATATTTTTTGTAAATGTCT+TGG + chr3.4:95548617-95548636 MS.gene72027:intron 20.0%
!!! GATATGTATTTTGCATAATT+TGG - chr3.4:95550454-95550473 None:intergenic 20.0%
!!! GTTTTTTAATAAAGTAATGG+GGG + chr3.4:95548454-95548473 MS.gene72027:intron 20.0%
!!! TTATGAAATTGTTTGTTACA+GGG + chr3.4:95550301-95550320 MS.gene72027:intron 20.0%
! ACAAGAAACAAAAATAGAGA+AGG - chr3.4:95547656-95547675 None:intergenic 25.0%
! ATCATTCTGTGATTATGATA+GGG + chr3.4:95549371-95549390 MS.gene72027:intron 25.0%
! ATTGTAAAAGGAAATGAAGA+TGG + chr3.4:95550894-95550913 MS.gene72027:CDS 25.0%
! CTCCATTATATAGATTAGAT+AGG + chr3.4:95547823-95547842 MS.gene72027:CDS 25.0%
! GAAGAACAAAAACAAATTTG+AGG - chr3.4:95549549-95549568 None:intergenic 25.0%
! GATGCATTATATATTTAGGA+TGG + chr3.4:95551268-95551287 MS.gene72027:intron 25.0%
! GATTCTGTATATCATATTCT+TGG + chr3.4:95550059-95550078 MS.gene72027:intron 25.0%
! GTGATTAAATAACATTGTTG+TGG + chr3.4:95548103-95548122 MS.gene72027:intron 25.0%
! TACATGTGTTATATCATTTG+AGG + chr3.4:95550562-95550581 MS.gene72027:intron 25.0%
! TATCATTCTGTGATTATGAT+AGG + chr3.4:95549370-95549389 MS.gene72027:intron 25.0%
! TATGCAAAAATAAATCGGTT+GGG + chr3.4:95548985-95549004 MS.gene72027:intron 25.0%
! TCTTAATTACAGATTCAAGT+TGG + chr3.4:95547795-95547814 MS.gene72027:intron 25.0%
! TTAAGTGGATCAACAAAAAA+TGG + chr3.4:95551434-95551453 MS.gene72027:CDS 25.0%
! TTATGCAAAAATAAATCGGT+TGG + chr3.4:95548984-95549003 MS.gene72027:intron 25.0%
! TTTACTAACAGATTGTCTAT+GGG + chr3.4:95548806-95548825 MS.gene72027:intron 25.0%
!! AAATACATATCCCTTTTTGA+TGG + chr3.4:95550463-95550482 MS.gene72027:CDS 25.0%
!! ATTTCCTTTTACAATGTGTT+GGG - chr3.4:95550889-95550908 None:intergenic 25.0%
!! CTTATGAAATTGTTTGTTAC+AGG + chr3.4:95550300-95550319 MS.gene72027:intron 25.0%
!! GATAATTTTTGTCATGTGTT+AGG + chr3.4:95547750-95547769 MS.gene72027:intron 25.0%
!! TTTTTGTTGATCCACTTAAA+TGG - chr3.4:95551433-95551452 None:intergenic 25.0%
!!! GTTTTACAAATTAAGTGTTG+TGG + chr3.4:95549072-95549091 MS.gene72027:intron 25.0%
AAAAAATTCAGACACCCAAA+TGG - chr3.4:95547975-95547994 None:intergenic 30.0%
AAAATAAAAGCAGCTTGATC+AGG - chr3.4:95551726-95551745 None:intergenic 30.0%
AAATAAATGTTGCTCAACCT+CGG - chr3.4:95548966-95548985 None:intergenic 30.0%
AAATCATGAATCTGTTTCAC+AGG + chr3.4:95551138-95551157 MS.gene72027:intron 30.0%
AACACCCAAATGATAACATA+AGG - chr3.4:95548854-95548873 None:intergenic 30.0%
ACTCTATTGAAACAGAAAAG+AGG - chr3.4:95548284-95548303 None:intergenic 30.0%
AGAACAAACCTAAATACATC+TGG - chr3.4:95549986-95550005 None:intergenic 30.0%
AGATTTAAACACAACACTAC+TGG - chr3.4:95551329-95551348 None:intergenic 30.0%
ATAAAAGTCATAGATGCCTT+TGG - chr3.4:95548144-95548163 None:intergenic 30.0%
ATAGATTAGATAGGAAGCTT+GGG + chr3.4:95547832-95547851 MS.gene72027:CDS 30.0%
ATAGGATTGTTGCATGTATT+GGG - chr3.4:95551392-95551411 None:intergenic 30.0%
ATTTACTAATTGACCATTGC+AGG - chr3.4:95549577-95549596 None:intergenic 30.0%
CTAGATCCAAAAAAGAACTA+AGG - chr3.4:95548661-95548680 None:intergenic 30.0%
CTCTATTGAAACAGAAAAGA+GGG - chr3.4:95548283-95548302 None:intergenic 30.0%
CTTTACTAACAGATTGTCTA+TGG + chr3.4:95548805-95548824 MS.gene72027:intron 30.0%
GAACAAACCTAAATACATCT+GGG - chr3.4:95549985-95550004 None:intergenic 30.0%
GGAAAAAATTTGTACACCAA+AGG + chr3.4:95548125-95548144 MS.gene72027:intron 30.0%
GTTGATCATAATCAACATGA+AGG - chr3.4:95549961-95549980 None:intergenic 30.0%
TATAGATTAGATAGGAAGCT+TGG + chr3.4:95547831-95547850 MS.gene72027:CDS 30.0%
TATAGGATTGTTGCATGTAT+TGG - chr3.4:95551393-95551412 None:intergenic 30.0%
TGGTTTATTTATTAGCAGTG+TGG + chr3.4:95550914-95550933 MS.gene72027:CDS 30.0%
TGTAACATAATGTTACACAC+AGG + chr3.4:95548500-95548519 MS.gene72027:intron 30.0%
TGTATATCATATTCTTGGCA+GGG + chr3.4:95550064-95550083 MS.gene72027:intron 30.0%
TTAATGCTACCTGCAATTAT+TGG - chr3.4:95548187-95548206 None:intergenic 30.0%
TTACTAACAGATTGTCTATG+GGG + chr3.4:95548807-95548826 MS.gene72027:intron 30.0%
TTACTAACATTGGTATTGCA+TGG - chr3.4:95549631-95549650 None:intergenic 30.0%
TTGTTACAGGGAGAAAATAA+AGG + chr3.4:95550313-95550332 MS.gene72027:intron 30.0%
TTTACCTTAACATGAGTACT+AGG - chr3.4:95551810-95551829 None:intergenic 30.0%
! AAATTCTTCTGATTTAGCTC+TGG + chr3.4:95549023-95549042 MS.gene72027:intron 30.0%
! ACTTTTTATAGCACATTAGG+TGG + chr3.4:95548359-95548378 MS.gene72027:intron 30.0%
! AGGTTTCTTTTTATCCAGTA+GGG + chr3.4:95549125-95549144 MS.gene72027:intron 30.0%
! ATACTCTTAAAGCCCTTTTA+TGG + chr3.4:95550595-95550614 MS.gene72027:intron 30.0%
! ATTGATACATGTTGCCATTT+GGG + chr3.4:95547958-95547977 MS.gene72027:intron 30.0%
! CACAATGTTTTCGATTTTCT+CGG - chr3.4:95547397-95547416 None:intergenic 30.0%
! CATTTCCTTTTACAATGTGT+TGG - chr3.4:95550890-95550909 None:intergenic 30.0%
! TACTCTTAAAGCCCTTTTAT+GGG + chr3.4:95550596-95550615 MS.gene72027:intron 30.0%
! TCTTTTCTGTTTCAATAGAG+TGG + chr3.4:95548283-95548302 MS.gene72027:intron 30.0%
! TGATGAGAAAAAGTTGTTTC+TGG + chr3.4:95549815-95549834 MS.gene72027:CDS 30.0%
! TTACAAATTAAGTGTTGTGG+AGG + chr3.4:95549075-95549094 MS.gene72027:intron 30.0%
! TTTTCCTAGTACTCATGTTA+AGG + chr3.4:95551803-95551822 MS.gene72027:CDS 30.0%
!! AAACAACTTTTTCTCATCAG+GGG - chr3.4:95549814-95549833 None:intergenic 30.0%
!! AGAAACAACTTTTTCTCATC+AGG - chr3.4:95549816-95549835 None:intergenic 30.0%
!! ATAAAAGGGCTTTAAGAGTA+TGG - chr3.4:95550596-95550615 None:intergenic 30.0%
!! ATTGACAATGAAAGCATCAA+AGG - chr3.4:95549876-95549895 None:intergenic 30.0%
!! GAAACAACTTTTTCTCATCA+GGG - chr3.4:95549815-95549834 None:intergenic 30.0%
!! TAATTACAGATTCAAGTTGG+TGG + chr3.4:95547798-95547817 MS.gene72027:intron 30.0%
!! TTGACAATGAAAGCATCAAA+GGG - chr3.4:95549875-95549894 None:intergenic 30.0%
!!! CTCACTTTTTATAGCACATT+AGG + chr3.4:95548356-95548375 MS.gene72027:intron 30.0%
!!! CTTAGTTCTTTTTTGGATCT+AGG + chr3.4:95548659-95548678 MS.gene72027:intron 30.0%
!!! GTCTAACCTTAGTTCTTTTT+TGG + chr3.4:95548652-95548671 MS.gene72027:intron 30.0%
!!! TAGTTTTTTTTTTTACCCCG+AGG + chr3.4:95548946-95548965 MS.gene72027:intron 30.0%
AAGTCCCAAATCAAGTAGTA+TGG + chr3.4:95549416-95549435 MS.gene72027:intron 35.0%
AATAAATGTTGCTCAACCTC+GGG - chr3.4:95548965-95548984 None:intergenic 35.0%
ACAAAAGCAACACAAAGCTT+CGG - chr3.4:95550374-95550393 None:intergenic 35.0%
ACCCACAATTCCATCAAAAA+GGG - chr3.4:95550476-95550495 None:intergenic 35.0%
AGTAGAGAGATTGAAAGAAG+AGG + chr3.4:95547437-95547456 MS.gene72027:CDS 35.0%
AGTGGATCAACAAAAAATGG+AGG + chr3.4:95551437-95551456 MS.gene72027:CDS 35.0%
ATAATGTTACACACAGGTCA+TGG + chr3.4:95548506-95548525 MS.gene72027:intron 35.0%
ATCAACAAAAAATGGAGGGA+AGG + chr3.4:95551442-95551461 MS.gene72027:CDS 35.0%
ATCCTAAAAGCTAGCTATCA+AGG - chr3.4:95549479-95549498 None:intergenic 35.0%
ATGAATCTGTTTCACAGGAA+TGG + chr3.4:95551143-95551162 MS.gene72027:intron 35.0%
ATGGCAACATGTATCAATCA+CGG - chr3.4:95547956-95547975 None:intergenic 35.0%
CAAAAACAAATTTGAGGGCA+TGG - chr3.4:95549543-95549562 None:intergenic 35.0%
CACAACACAAACCCATAAAA+GGG - chr3.4:95550610-95550629 None:intergenic 35.0%
CTACATATTCTACAAACTGC+CGG - chr3.4:95550408-95550427 None:intergenic 35.0%
CTCGCCTTATGTTATCATTT+GGG + chr3.4:95548847-95548866 MS.gene72027:intron 35.0%
CTGTATATCATATTCTTGGC+AGG + chr3.4:95550063-95550082 MS.gene72027:intron 35.0%
CTTCACTATGAACATTTCTG+AGG - chr3.4:95547612-95547631 None:intergenic 35.0%
CTTTCCCAACACATTGTAAA+AGG + chr3.4:95550882-95550901 MS.gene72027:CDS 35.0%
GAACTAATGAGAAAACTGCA+GGG - chr3.4:95549206-95549225 None:intergenic 35.0%
GATATTGCTCCAATAATTGC+AGG + chr3.4:95548175-95548194 MS.gene72027:intron 35.0%
GATTGATACATGTTGCCATT+TGG + chr3.4:95547957-95547976 MS.gene72027:intron 35.0%
GTATATCATATTCTTGGCAG+GGG + chr3.4:95550065-95550084 MS.gene72027:intron 35.0%
GTGGATCAACAAAAAATGGA+GGG + chr3.4:95551438-95551457 MS.gene72027:CDS 35.0%
TAGAGAAGATGCATTGTAGA+GGG + chr3.4:95548731-95548750 MS.gene72027:CDS 35.0%
TCACAACACAAACCCATAAA+AGG - chr3.4:95550611-95550630 None:intergenic 35.0%
TCTCGCCTTATGTTATCATT+TGG + chr3.4:95548846-95548865 MS.gene72027:intron 35.0%
TCTTGTCTGCAAGAAAAAGA+TGG + chr3.4:95550339-95550358 MS.gene72027:CDS 35.0%
TGAACTAATGAGAAAACTGC+AGG - chr3.4:95549207-95549226 None:intergenic 35.0%
TGATGAACAACCAAAGAAGA+AGG + chr3.4:95550686-95550705 MS.gene72027:CDS 35.0%
TGTGATTATGATAGGGACTT+GGG + chr3.4:95549378-95549397 MS.gene72027:intron 35.0%
TGTGCTATAAAAAGTGAGCA+TGG - chr3.4:95548354-95548373 None:intergenic 35.0%
TGTTGTGAAGCTTATATGTC+AGG + chr3.4:95550623-95550642 MS.gene72027:intron 35.0%
TTAGAGAAGATGCATTGTAG+AGG + chr3.4:95548730-95548749 MS.gene72027:CDS 35.0%
TTCCCCATGAGGTAAAAAAA+CGG - chr3.4:95548877-95548896 None:intergenic 35.0%
TTCGATGAATACCTTCACTA+GGG - chr3.4:95551662-95551681 None:intergenic 35.0%
TTGAGCATAGAAACAGCAAA+GGG + chr3.4:95548210-95548229 MS.gene72027:CDS 35.0%
TTTGAGCATAGAAACAGCAA+AGG + chr3.4:95548209-95548228 MS.gene72027:CDS 35.0%
! ATCCCTTTTTGATGGAATTG+TGG + chr3.4:95550471-95550490 MS.gene72027:CDS 35.0%
! ATCTAGGATGTCTACTGAAA+TGG + chr3.4:95548675-95548694 MS.gene72027:intron 35.0%
! GAGGTTTCTTTTTATCCAGT+AGG + chr3.4:95549124-95549143 MS.gene72027:intron 35.0%
! GCTCAAAACCTTTGTTTCAT+TGG - chr3.4:95550765-95550784 None:intergenic 35.0%
! TCCCTTTTTGATGGAATTGT+GGG + chr3.4:95550472-95550491 MS.gene72027:CDS 35.0%
!! AAACGAGTCACTGACTTTAT+AGG - chr3.4:95551410-95551429 None:intergenic 35.0%
!! AAGTTGTTTCTGGTTGATCT+TGG + chr3.4:95549825-95549844 MS.gene72027:CDS 35.0%
!! TGTTTCACAGGAATGGATTA+TGG + chr3.4:95551150-95551169 MS.gene72027:intron 35.0%
!! TTTCTGGTTGATCTTGGATT+AGG + chr3.4:95549831-95549850 MS.gene72027:CDS 35.0%
!!! AGGATTTTTTGTCACTGCTA+TGG + chr3.4:95551462-95551481 MS.gene72027:CDS 35.0%
!!! GACTTTCTATATTTTGGCGT+AGG + chr3.4:95550832-95550851 MS.gene72027:intron 35.0%
!!! GGGTGAGTATTTTAGTAGAT+TGG + chr3.4:95549445-95549464 MS.gene72027:intron 35.0%
!!! GTTCCGTTTTTTTACCTCAT+GGG + chr3.4:95548871-95548890 MS.gene72027:intron 35.0%
!!! TGTTCCGTTTTTTTACCTCA+TGG + chr3.4:95548870-95548889 MS.gene72027:intron 35.0%
!!! TTCCGTTTTTTTACCTCATG+GGG + chr3.4:95548872-95548891 MS.gene72027:intron 35.0%
AAAATCACCTTCTCAGGAAG+TGG - chr3.4:95547585-95547604 None:intergenic 40.0%
AAACACCGTACATACCTCAA+CGG - chr3.4:95547913-95547932 None:intergenic 40.0%
AAGCCTGAAAACTTCTTGCT+TGG + chr3.4:95549777-95549796 MS.gene72027:CDS 40.0%
AATCAAGTAGTATGGCGTGT+TGG + chr3.4:95549424-95549443 MS.gene72027:intron 40.0%
ACACGCCATACTACTTGATT+TGG - chr3.4:95549424-95549443 None:intergenic 40.0%
ACCAACCTTGTGAAGAAAAC+TGG - chr3.4:95551015-95551034 None:intergenic 40.0%
AGAGAATAAGAAGAAGGCAG+TGG + chr3.4:95547464-95547483 MS.gene72027:CDS 40.0%
AGCGTTTCTTGAGTTTCATC+AGG - chr3.4:95551771-95551790 None:intergenic 40.0%
AGTTGTACTCCCTTCTTCTT+CGG - chr3.4:95547562-95547581 None:intergenic 40.0%
ATAAATGTTGCTCAACCTCG+GGG - chr3.4:95548964-95548983 None:intergenic 40.0%
ATAACCTGATATCCTTGCCA+AGG - chr3.4:95550200-95550219 None:intergenic 40.0%
ATAAGAAGAAGGCAGTGGTT+AGG + chr3.4:95547469-95547488 MS.gene72027:CDS 40.0%
ATATCTGCAACAACAACAGC+AGG - chr3.4:95549742-95549761 None:intergenic 40.0%
ATCAACGCCCAGATGTATTT+AGG + chr3.4:95549975-95549994 MS.gene72027:CDS 40.0%
ATCAAGTAGTATGGCGTGTT+GGG + chr3.4:95549425-95549444 MS.gene72027:intron 40.0%
ATCTTGGTAGAACAAGTAGC+AGG + chr3.4:95550117-95550136 MS.gene72027:CDS 40.0%
ATTAGATAGGAAGCTTGGGA+AGG + chr3.4:95547836-95547855 MS.gene72027:CDS 40.0%
CAAAAGCAACACAAAGCTTC+GGG - chr3.4:95550373-95550392 None:intergenic 40.0%
CACGCCATACTACTTGATTT+GGG - chr3.4:95549423-95549442 None:intergenic 40.0%
CATATCTATTCCCGTTGCTT+CGG - chr3.4:95548083-95548102 None:intergenic 40.0%
CTAAAAGCTAGCTATCAAGG+AGG - chr3.4:95549476-95549495 None:intergenic 40.0%
CTCGTAGACCAATGAAACAA+AGG + chr3.4:95550754-95550773 MS.gene72027:CDS 40.0%
CTGTGATTATGATAGGGACT+TGG + chr3.4:95549377-95549396 MS.gene72027:intron 40.0%
CTTCGATGAATACCTTCACT+AGG - chr3.4:95551663-95551682 None:intergenic 40.0%
GACCCACAATTCCATCAAAA+AGG - chr3.4:95550477-95550496 None:intergenic 40.0%
GAGAGATTGAAAGAAGAGGA+AGG + chr3.4:95547441-95547460 MS.gene72027:CDS 40.0%
GATAGGGACTTGGGTATTAT+GGG + chr3.4:95549387-95549406 MS.gene72027:intron 40.0%
GCAAGGTGACTACTACATTA+TGG + chr3.4:95548418-95548437 MS.gene72027:CDS 40.0%
GCGTAGGTATCATTACAATG+TGG + chr3.4:95550848-95550867 MS.gene72027:intron 40.0%
GGAAGGAGAGAATAAGAAGA+AGG + chr3.4:95547458-95547477 MS.gene72027:CDS 40.0%
GGAATCAAAATCACCTTCTC+AGG - chr3.4:95547591-95547610 None:intergenic 40.0%
GTGAAGCTTATATGTCAGGT+TGG + chr3.4:95550627-95550646 MS.gene72027:intron 40.0%
GTGACTCGTTTCCATTTAAG+TGG + chr3.4:95551419-95551438 MS.gene72027:CDS 40.0%
GTTCCACGAGTACATTACAA+GGG + chr3.4:95548392-95548411 MS.gene72027:CDS 40.0%
GTTGCTTCGGCACAAAATAA+CGG - chr3.4:95548070-95548089 None:intergenic 40.0%
GTTTCTTGAGTTTCATCAGG+TGG - chr3.4:95551768-95551787 None:intergenic 40.0%
TAAGAAGAAGGCAGTGGTTA+GGG + chr3.4:95547470-95547489 MS.gene72027:CDS 40.0%
TACTAGGAAAATCAGACGTG+CGG - chr3.4:95551794-95551813 None:intergenic 40.0%
TAGGATGTCTACTGAAATGG+TGG + chr3.4:95548678-95548697 MS.gene72027:intron 40.0%
TAGTCTTTGGGCACTCATTA+TGG + chr3.4:95550947-95550966 MS.gene72027:CDS 40.0%
TATTACATCAGTGCCATAGC+TGG + chr3.4:95551190-95551209 MS.gene72027:CDS 40.0%
TATTCTACAAACTGCCGGAA+AGG - chr3.4:95550403-95550422 None:intergenic 40.0%
TCTAGTTGAGTCAGACGTTA+TGG + chr3.4:95547702-95547721 MS.gene72027:intron 40.0%
TGATAGGGACTTGGGTATTA+TGG + chr3.4:95549386-95549405 MS.gene72027:intron 40.0%
TGTTCCACGAGTACATTACA+AGG + chr3.4:95548391-95548410 MS.gene72027:CDS 40.0%
TGTTGTTGCAGATATGTGCA+TGG + chr3.4:95549747-95549766 MS.gene72027:intron 40.0%
TTAGATAGGAAGCTTGGGAA+GGG + chr3.4:95547837-95547856 MS.gene72027:CDS 40.0%
TTCATCATCATCCTCTTCCA+TGG - chr3.4:95550673-95550692 None:intergenic 40.0%
TTCTCTCTAAACTCGATGCT+AGG + chr3.4:95551614-95551633 MS.gene72027:intron 40.0%
TTGTAAACCTGCCATTCATG+TGG - chr3.4:95548251-95548270 None:intergenic 40.0%
! AACAGCAAAGGGTGCAATTA+CGG + chr3.4:95548221-95548240 MS.gene72027:CDS 40.0%
! AATTAAGTGTTGTGGAGGAG+AGG + chr3.4:95549080-95549099 MS.gene72027:intron 40.0%
! ACTTTTCATGAGCACATCTC+AGG - chr3.4:95549294-95549313 None:intergenic 40.0%
! AGAGGTTTCTTGTTATCCAG+AGG + chr3.4:95549098-95549117 MS.gene72027:intron 40.0%
! AGGTTTCTTGTTATCCAGAG+GGG + chr3.4:95549100-95549119 MS.gene72027:intron 40.0%
! CATCAGGTGGTTTTCTTCTT+GGG - chr3.4:95551755-95551774 None:intergenic 40.0%
! CTCTTCCAGTTTTCTTCACA+AGG + chr3.4:95551007-95551026 MS.gene72027:CDS 40.0%
! GAAGACAAGAGTGTAAGCAA+GGG - chr3.4:95550159-95550178 None:intergenic 40.0%
! GAGGTTTCTTGTTATCCAGA+GGG + chr3.4:95549099-95549118 MS.gene72027:intron 40.0%
! TCATCAGGTGGTTTTCTTCT+TGG - chr3.4:95551756-95551775 None:intergenic 40.0%
! TCCAGTTTTCTTCACAAGGT+TGG + chr3.4:95551011-95551030 MS.gene72027:intron 40.0%
! TCTTTTTATCCAGTAGGGTG+AGG + chr3.4:95549130-95549149 MS.gene72027:intron 40.0%
! TTTTCTACACAGCAACTCGT+TGG + chr3.4:95549918-95549937 MS.gene72027:intron 40.0%
!! AGGAATGGATTATGGAACAG+TGG + chr3.4:95551158-95551177 MS.gene72027:intron 40.0%
!! ATATGCTTGGCTCTAGTCTA+TGG + chr3.4:95548529-95548548 MS.gene72027:CDS 40.0%
!! CTAGTGAAGGTATTCATCGA+AGG + chr3.4:95551661-95551680 MS.gene72027:CDS 40.0%
!! GAAAGCATCAAAGGGTAACA+TGG - chr3.4:95549867-95549886 None:intergenic 40.0%
!! GGAATGGATTATGGAACAGT+GGG + chr3.4:95551159-95551178 MS.gene72027:intron 40.0%
!! GTTATTTTGTGCCGAAGCAA+CGG + chr3.4:95548069-95548088 MS.gene72027:intron 40.0%
!! TATGCTTGGCTCTAGTCTAT+GGG + chr3.4:95548530-95548549 MS.gene72027:CDS 40.0%
!! TGAAGGTATTCATCGAAGGT+GGG + chr3.4:95551665-95551684 MS.gene72027:CDS 40.0%
!! TTATTTTGTGCCGAAGCAAC+GGG + chr3.4:95548070-95548089 MS.gene72027:intron 40.0%
!!! CTCCTTGATAGCTAGCTTTT+AGG + chr3.4:95549474-95549493 MS.gene72027:intron 40.0%
AAAAAGAAACCTCACCCCTC+TGG - chr3.4:95549117-95549136 None:intergenic 45.0%
AAAGAGAGGACGATTGACCA+TGG + chr3.4:95550653-95550672 MS.gene72027:CDS 45.0%
AAGTAGCAGGAGAGATGACT+TGG + chr3.4:95550130-95550149 MS.gene72027:CDS 45.0%
AATTAGGCCCCTAAATACCG+AGG + chr3.4:95550507-95550526 MS.gene72027:CDS 45.0%
ACACAGGTCATGGATATGCT+TGG + chr3.4:95548516-95548535 MS.gene72027:intron 45.0%
ACACTAATCCACTGTGTTGC+TGG - chr3.4:95550726-95550745 None:intergenic 45.0%
ACCAAAGAAGAAGGTCCGAA+TGG + chr3.4:95550695-95550714 MS.gene72027:CDS 45.0%
ACTAATTGACCATTGCAGGC+AGG - chr3.4:95549573-95549592 None:intergenic 45.0%
ACTCTTGTCTTCCTTCTTCG+TGG + chr3.4:95550167-95550186 MS.gene72027:CDS 45.0%
AGCACATTAGGTGGTAGTCA+TGG + chr3.4:95548368-95548387 MS.gene72027:intron 45.0%
ATTACAATGTGGCCGATGAG+CGG + chr3.4:95550859-95550878 MS.gene72027:CDS 45.0%
ATTACGGACCTCCACATGAA+TGG + chr3.4:95548237-95548256 MS.gene72027:CDS 45.0%
ATTAGGCCCCTAAATACCGA+GGG + chr3.4:95550508-95550527 MS.gene72027:CDS 45.0%
ATTGAACGTGTTTCCCCATG+AGG - chr3.4:95548888-95548907 None:intergenic 45.0%
CACGAGTACATTACAAGGGA+CGG + chr3.4:95548396-95548415 MS.gene72027:CDS 45.0%
CATTAGTTCAGACTGAGAGC+AGG + chr3.4:95549217-95549236 MS.gene72027:intron 45.0%
CCAAAGAAGAAGGTCCGAAT+GGG + chr3.4:95550696-95550715 MS.gene72027:CDS 45.0%
CGAAGCAACGGGAATAGATA+TGG + chr3.4:95548081-95548100 MS.gene72027:intron 45.0%
CTAAACTCGATGCTAGGTTG+TGG + chr3.4:95551620-95551639 MS.gene72027:intron 45.0%
CTAATTGACCATTGCAGGCA+GGG - chr3.4:95549572-95549591 None:intergenic 45.0%
GAATACCTTCACTAGGGTAC+AGG - chr3.4:95551656-95551675 None:intergenic 45.0%
GACAAGTATCTGAGCACTTG+AGG - chr3.4:95549503-95549522 None:intergenic 45.0%
GATAACATAAGGCGAGACTC+AGG - chr3.4:95548843-95548862 None:intergenic 45.0%
GATTTCCTGTACCCTAGTGA+AGG + chr3.4:95551648-95551667 MS.gene72027:CDS 45.0%
GCTATGGATGAGTACGATAG+TGG + chr3.4:95547507-95547526 MS.gene72027:CDS 45.0%
GCTCTAGTCTATGGGATGTT+TGG + chr3.4:95548538-95548557 MS.gene72027:CDS 45.0%
GGATTTGGGCAAGTCTATGT+TGG + chr3.4:95547861-95547880 MS.gene72027:CDS 45.0%
GGGGTTTCTATTGTCTCTGA+AGG + chr3.4:95548473-95548492 MS.gene72027:intron 45.0%
GGTGTTTATGTCTGCCATTG+TGG + chr3.4:95547926-95547945 MS.gene72027:intron 45.0%
GTATTTAGGGGCCTAATTGC+AGG - chr3.4:95550505-95550524 None:intergenic 45.0%
GTGAATAACGACGACGAAAC+AGG + chr3.4:95547414-95547433 MS.gene72027:CDS 45.0%
GTGATCTGCTGTTCCTTACA+GGG + chr3.4:95551365-95551384 MS.gene72027:intron 45.0%
GTTACCTTGGCAAGGATATC+AGG + chr3.4:95550193-95550212 MS.gene72027:CDS 45.0%
TAAACCTGCCATTCATGTGG+AGG - chr3.4:95548248-95548267 None:intergenic 45.0%
TAAGCTTGACACACTGATCC+TGG - chr3.4:95549171-95549190 None:intergenic 45.0%
TAATTGACCATTGCAGGCAG+GGG - chr3.4:95549571-95549590 None:intergenic 45.0%
TACAACTCCACTTCCTGAGA+AGG + chr3.4:95547575-95547594 MS.gene72027:CDS 45.0%
TGGGTCCAAATCCTGCAATT+AGG + chr3.4:95550491-95550510 MS.gene72027:CDS 45.0%
TGTGATCTGCTGTTCCTTAC+AGG + chr3.4:95551364-95551383 MS.gene72027:intron 45.0%
TTGCAGCAGTTGCAGTAATG+CGG - chr3.4:95551701-95551720 None:intergenic 45.0%
TTGTCTTCCTTCTTCGTGGT+CGG + chr3.4:95550171-95550190 MS.gene72027:CDS 45.0%
! AGTGGTTAGGGTTTCTAGAG+AGG + chr3.4:95547482-95547501 MS.gene72027:CDS 45.0%
! ATGGATGAGTACGATAGTGG+TGG + chr3.4:95547510-95547529 MS.gene72027:CDS 45.0%
! GGAAGACAAGAGTGTAAGCA+AGG - chr3.4:95550160-95550179 None:intergenic 45.0%
! GGTCCAAGCAAGAAGTTTTC+AGG - chr3.4:95549783-95549802 None:intergenic 45.0%
! GGTTTCTAGAGAGGAAGCTA+TGG + chr3.4:95547491-95547510 MS.gene72027:CDS 45.0%
!! GGCTTCTTGTGCTAGTCTTT+GGG + chr3.4:95550935-95550954 MS.gene72027:CDS 45.0%
!! GTGAAGGTATTCATCGAAGG+TGG + chr3.4:95551664-95551683 MS.gene72027:CDS 45.0%
!! TGGCTTCTTGTGCTAGTCTT+TGG + chr3.4:95550934-95550953 MS.gene72027:CDS 45.0%
!! TGTCAGGTTGGACAAAAGAG+AGG + chr3.4:95550639-95550658 MS.gene72027:CDS 45.0%
!! TATATTTATTATTTATACAT+GGG + chr3.4:95548778-95548797 MS.gene72027:intron 5.0%
!! TTATATTTATTATTTATACA+TGG + chr3.4:95548777-95548796 MS.gene72027:intron 5.0%
AACTTCTTGCTTGGACCCTC+AGG + chr3.4:95549786-95549805 MS.gene72027:CDS 50.0%
AAGCTTGGGAAGGGAGGATT+TGG + chr3.4:95547846-95547865 MS.gene72027:CDS 50.0%
AAGGTAACCGACCACGAAGA+AGG - chr3.4:95550181-95550200 None:intergenic 50.0%
AAGTACCTTCTGAGCACCCT+CGG - chr3.4:95550527-95550546 None:intergenic 50.0%
ACACAAAGCTTCGGGTGAAG+TGG - chr3.4:95550365-95550384 None:intergenic 50.0%
AGCTTGGGAAGGGAGGATTT+GGG + chr3.4:95547847-95547866 MS.gene72027:CDS 50.0%
AGGACGATTGACCATGGAAG+AGG + chr3.4:95550659-95550678 MS.gene72027:CDS 50.0%
AGGGGCCTAATTGCAGGATT+TGG - chr3.4:95550499-95550518 None:intergenic 50.0%
ATTGTTATGTCCCGTGGTGC+TGG + chr3.4:95551508-95551527 MS.gene72027:CDS 50.0%
CCATAGCTGGAGCTAGTAAC+GGG + chr3.4:95551203-95551222 MS.gene72027:CDS 50.0%
CCCATTCGGACCTTCTTCTT+TGG - chr3.4:95550699-95550718 None:intergenic 50.0%
CGTCCCTTGTAATGTACTCG+TGG - chr3.4:95548398-95548417 None:intergenic 50.0%
CGTTGGCGTGATAGTTCAAC+TGG + chr3.4:95549935-95549954 MS.gene72027:CDS 50.0%
CTCATTATGGATGCTGGCAC+TGG + chr3.4:95550960-95550979 MS.gene72027:CDS 50.0%
CTCTGTAAATCCAGCACCAC+GGG - chr3.4:95551521-95551540 None:intergenic 50.0%
CTGAGCACCCTCGGTATTTA+GGG - chr3.4:95550518-95550537 None:intergenic 50.0%
GCATGTATTGGGTCCCTGTA+AGG - chr3.4:95551381-95551400 None:intergenic 50.0%
GCCATAGCTGGAGCTAGTAA+CGG + chr3.4:95551202-95551221 MS.gene72027:CDS 50.0%
GCTAGTGTGCATGCACATCT+TGG + chr3.4:95550101-95550120 MS.gene72027:CDS 50.0%
GCTCTGTAAATCCAGCACCA+CGG - chr3.4:95551522-95551541 None:intergenic 50.0%
GGTGGCATGTATTGCAATCG+AGG + chr3.4:95548696-95548715 MS.gene72027:CDS 50.0%
GTACATTACAAGGGACGGCA+AGG + chr3.4:95548401-95548420 MS.gene72027:CDS 50.0%
TAGGGTGAGGTCCATGCTAA+GGG + chr3.4:95549143-95549162 MS.gene72027:intron 50.0%
TCAGTGAGACGGTTTATGCG+AGG - chr3.4:95547270-95547289 None:intergenic 50.0%
TCTGAGCACCCTCGGTATTT+AGG - chr3.4:95550519-95550538 None:intergenic 50.0%
TGAGACGGTTTATGCGAGGT+CGG - chr3.4:95547266-95547285 None:intergenic 50.0%
TGAGCACCCTCGGTATTTAG+GGG - chr3.4:95550517-95550536 None:intergenic 50.0%
TGATCCTGGTACCCTTAGCA+TGG - chr3.4:95549157-95549176 None:intergenic 50.0%
TGGGCAATTGTTATGTCCCG+TGG + chr3.4:95551502-95551521 MS.gene72027:CDS 50.0%
TGGGCACTCATTATGGATGC+TGG + chr3.4:95550954-95550973 MS.gene72027:CDS 50.0%
TTCTCATCAGGGGTTCCTGA+GGG - chr3.4:95549804-95549823 None:intergenic 50.0%
TTCTTCGTGGTCGGTTACCT+TGG + chr3.4:95550180-95550199 MS.gene72027:CDS 50.0%
TTTCTCATCAGGGGTTCCTG+AGG - chr3.4:95549805-95549824 None:intergenic 50.0%
! AACCCAAGTTCCACTTGCTG+TGG + chr3.4:95549244-95549263 MS.gene72027:intron 50.0%
! GAGGGTGAGACTCATTTTCC+TGG + chr3.4:95548749-95548768 MS.gene72027:intron 50.0%
! GCTTTTGTCCTGCACCTTTC+CGG + chr3.4:95550386-95550405 MS.gene72027:CDS 50.0%
! TCAATCACGGAGCACCACAA+TGG - chr3.4:95547943-95547962 None:intergenic 50.0%
! TCTTGTTATCCAGAGGGGTG+AGG + chr3.4:95549105-95549124 MS.gene72027:intron 50.0%
! TGGTGCTGGATTTACAGAGC+AGG + chr3.4:95551522-95551541 MS.gene72027:CDS 50.0%
!! AAATACCGAGGGTGCTCAGA+AGG + chr3.4:95550519-95550538 MS.gene72027:CDS 50.0%
!! AGCTAGTAACGGGTCCTCAT+TGG + chr3.4:95551213-95551232 MS.gene72027:CDS 50.0%
!! TGGTGCCGTTGAGGTATGTA+CGG + chr3.4:95547905-95547924 MS.gene72027:intron 50.0%
!! TTCCACTTGCTGTGGCCTAT+GGG + chr3.4:95549252-95549271 MS.gene72027:intron 50.0%
AGGCCACAGCAAGTGGAACT+TGG - chr3.4:95549250-95549269 None:intergenic 55.0%
ATTCCTTCTGGTCTGTGCGG+AGG - chr3.4:95547337-95547356 None:intergenic 55.0%
CACAGACCAGAAGGAATCGG+AGG + chr3.4:95547340-95547359 MS.gene72027:CDS 55.0%
CCCGTTACTAGCTCCAGCTA+TGG - chr3.4:95551206-95551225 None:intergenic 55.0%
CCGATTCCTTCTGGTCTGTG+CGG - chr3.4:95547340-95547359 None:intergenic 55.0%
CCGCACAGACCAGAAGGAAT+CGG + chr3.4:95547337-95547356 MS.gene72027:CDS 55.0%
CTTCTGCCTCCGATTCCTTC+TGG - chr3.4:95547349-95547368 None:intergenic 55.0%
GAGACGGTTTATGCGAGGTC+GGG - chr3.4:95547265-95547284 None:intergenic 55.0%
GATAGGAAGCTTGGGAAGGG+AGG + chr3.4:95547840-95547859 MS.gene72027:CDS 55.0%
GCACATCTCAGGTGCCAAAC+AGG - chr3.4:95549283-95549302 None:intergenic 55.0%
GCCAAACAGGTTCACCCCAT+AGG - chr3.4:95549270-95549289 None:intergenic 55.0%
GCCTATGGGGTGAACCTGTT+TGG + chr3.4:95549266-95549285 MS.gene72027:intron 55.0%
GGCCACAGCAAGTGGAACTT+GGG - chr3.4:95549249-95549268 None:intergenic 55.0%
GTAGGGTGAGGTCCATGCTA+AGG + chr3.4:95549142-95549161 MS.gene72027:intron 55.0%
GTGTTGGGAAAGCCGCTCAT+CGG - chr3.4:95550874-95550893 None:intergenic 55.0%
TAGCATGGACCTCACCCTAC+TGG - chr3.4:95549142-95549161 None:intergenic 55.0%
TGTTCTTCCCCTGCCTGCAA+TGG + chr3.4:95549561-95549580 MS.gene72027:intron 55.0%
! ACAAACTGCCGGAAAGGTGC+AGG - chr3.4:95550397-95550416 None:intergenic 55.0%
! CCGGAGCTTTATCGGCACTA+CGG - chr3.4:95547536-95547555 None:intergenic 55.0%
! GAGTGGAGCTGCTTTGCTGA+AGG + chr3.4:95548300-95548319 MS.gene72027:intron 55.0%
! GTGTTGCTGGCTGACCCATT+CGG - chr3.4:95550713-95550732 None:intergenic 55.0%
! TTCGGCTCCCGGAGCTTTAT+CGG - chr3.4:95547544-95547563 None:intergenic 55.0%
!! AGGTCCATGCTAAGGGTACC+AGG + chr3.4:95549150-95549169 MS.gene72027:intron 55.0%
!! CCGTAGTGCCGATAAAGCTC+CGG + chr3.4:95547533-95547552 MS.gene72027:CDS 55.0%
!! CGTAGTGCCGATAAAGCTCC+GGG + chr3.4:95547534-95547553 MS.gene72027:CDS 55.0%
!! GAGGGTGCTCAGAAGGTACT+TGG + chr3.4:95550526-95550545 MS.gene72027:intron 55.0%
!! GTTCCACTTGCTGTGGCCTA+TGG + chr3.4:95549251-95549270 MS.gene72027:intron 55.0%
!! TCCACTTGCTGTGGCCTATG+GGG + chr3.4:95549253-95549272 MS.gene72027:intron 55.0%
ACCCCATAGGCCACAGCAAG+TGG - chr3.4:95549257-95549276 None:intergenic 60.0%
CAGAACCAGCTCCTACGCGT+CGG - chr3.4:95547887-95547906 None:intergenic 60.0%
CGGACCTCCACATGAATGGC+AGG + chr3.4:95548241-95548260 MS.gene72027:CDS 60.0%
CGTGGTCGGTTACCTTGGCA+AGG + chr3.4:95550185-95550204 MS.gene72027:CDS 60.0%
CTCCCTTCTTCTTCGGCTCC+CGG - chr3.4:95547555-95547574 None:intergenic 60.0%
CTCCGGGAGCCGAAGAAGAA+GGG + chr3.4:95547550-95547569 MS.gene72027:CDS 60.0%
GCGGCGCGTTATCAGTGAGA+CGG - chr3.4:95547281-95547300 None:intergenic 60.0%
GGCCACTGCTGGCACTAGAT+GGG + chr3.4:95551483-95551502 MS.gene72027:CDS 60.0%
GTCACTGCTATGGCCACTGC+TGG + chr3.4:95551472-95551491 MS.gene72027:CDS 60.0%
GTCTATGTTGGCCGACGCGT+AGG + chr3.4:95547873-95547892 MS.gene72027:CDS 60.0%
TAAGGCGAGACTCAGGCAGC+AGG - chr3.4:95548836-95548855 None:intergenic 60.0%
TGCCCATCTAGTGCCAGCAG+TGG - chr3.4:95551488-95551507 None:intergenic 60.0%
TGGCCACTGCTGGCACTAGA+TGG + chr3.4:95551482-95551501 MS.gene72027:CDS 60.0%
TGGGTCAGCCAGCAACACAG+TGG + chr3.4:95550715-95550734 MS.gene72027:CDS 60.0%
! TCTCACTGATAACGCGCCGC+CGG + chr3.4:95547281-95547300 MS.gene72027:CDS 60.0%
!! AGCTGGTTCTGGTGCCGTTG+AGG + chr3.4:95547896-95547915 MS.gene72027:CDS 60.0%
CCACCTCCGCACAGACCAGA+AGG + chr3.4:95547331-95547350 MS.gene72027:CDS 65.0%
CCTTCTGGTCTGTGCGGAGG+TGG - chr3.4:95547334-95547353 None:intergenic 65.0%
CGAGGTCGGGTACGCAACTC+AGG - chr3.4:95547252-95547271 None:intergenic 65.0%
GCTCCGGGAGCCGAAGAAGA+AGG + chr3.4:95547549-95547568 MS.gene72027:CDS 65.0%
! CGACGCGTAGGAGCTGGTTC+TGG + chr3.4:95547885-95547904 MS.gene72027:CDS 65.0%
CTGTGCGGAGGTGGCAGCGA+CGG - chr3.4:95547325-95547344 None:intergenic 70.0%
GTTGGCCGACGCGTAGGAGC+TGG + chr3.4:95547879-95547898 MS.gene72027:CDS 70.0%
AGCGACGGCTCTCCTCCCGC+CGG - chr3.4:95547310-95547329 None:intergenic 75.0%
GATAACGCGCCGCCGGTCGC+CGG + chr3.4:95547288-95547307 MS.gene72027:CDS 75.0%
! GCTCTCCTCCCGCCGGCGAC+CGG - chr3.4:95547303-95547322 None:intergenic 80.0%
! AACGCGCCGCCGGTCGCCGG+CGG + chr3.4:95547291-95547310 MS.gene72027:CDS 85.0%
! CTCCTCCCGCCGGCGACCGG+CGG - chr3.4:95547300-95547319 None:intergenic 85.0%
! ACGCGCCGCCGGTCGCCGGC+GGG + chr3.4:95547292-95547311 MS.gene72027:CDS 90.0%
! CGCCGCCGGTCGCCGGCGGG+AGG + chr3.4:95547295-95547314 MS.gene72027:CDS 95.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 95547246 95551842 95547246 ID=MS.gene72027
chr3.4 mRNA 95547246 95551842 95547246 ID=MS.gene72027.t1;Parent=MS.gene72027
chr3.4 exon 95547246 95547596 95547246 ID=MS.gene72027.t1.exon1;Parent=MS.gene72027.t1
chr3.4 CDS 95547246 95547596 95547246 ID=cds.MS.gene72027.t1;Parent=MS.gene72027.t1
chr3.4 exon 95547807 95547917 95547807 ID=MS.gene72027.t1.exon2;Parent=MS.gene72027.t1
chr3.4 CDS 95547807 95547917 95547807 ID=cds.MS.gene72027.t1;Parent=MS.gene72027.t1
chr3.4 exon 95548197 95548270 95548197 ID=MS.gene72027.t1.exon3;Parent=MS.gene72027.t1
chr3.4 CDS 95548197 95548270 95548197 ID=cds.MS.gene72027.t1;Parent=MS.gene72027.t1
chr3.4 exon 95548370 95548439 95548370 ID=MS.gene72027.t1.exon4;Parent=MS.gene72027.t1
chr3.4 CDS 95548370 95548439 95548370 ID=cds.MS.gene72027.t1;Parent=MS.gene72027.t1
chr3.4 exon 95548522 95548577 95548522 ID=MS.gene72027.t1.exon5;Parent=MS.gene72027.t1
chr3.4 CDS 95548522 95548577 95548522 ID=cds.MS.gene72027.t1;Parent=MS.gene72027.t1
chr3.4 exon 95548681 95548752 95548681 ID=MS.gene72027.t1.exon6;Parent=MS.gene72027.t1
chr3.4 CDS 95548681 95548752 95548681 ID=cds.MS.gene72027.t1;Parent=MS.gene72027.t1
chr3.4 exon 95549758 95549852 95549758 ID=MS.gene72027.t1.exon7;Parent=MS.gene72027.t1
chr3.4 CDS 95549758 95549852 95549758 ID=cds.MS.gene72027.t1;Parent=MS.gene72027.t1
chr3.4 exon 95549930 95549996 95549930 ID=MS.gene72027.t1.exon8;Parent=MS.gene72027.t1
chr3.4 CDS 95549930 95549996 95549930 ID=cds.MS.gene72027.t1;Parent=MS.gene72027.t1
chr3.4 exon 95550085 95550214 95550085 ID=MS.gene72027.t1.exon9;Parent=MS.gene72027.t1
chr3.4 CDS 95550085 95550214 95550085 ID=cds.MS.gene72027.t1;Parent=MS.gene72027.t1
chr3.4 exon 95550322 95550540 95550322 ID=MS.gene72027.t1.exon10;Parent=MS.gene72027.t1
chr3.4 CDS 95550322 95550540 95550322 ID=cds.MS.gene72027.t1;Parent=MS.gene72027.t1
chr3.4 exon 95550633 95550775 95550633 ID=MS.gene72027.t1.exon11;Parent=MS.gene72027.t1
chr3.4 CDS 95550633 95550775 95550633 ID=cds.MS.gene72027.t1;Parent=MS.gene72027.t1
chr3.4 exon 95550854 95551028 95550854 ID=MS.gene72027.t1.exon12;Parent=MS.gene72027.t1
chr3.4 CDS 95550854 95551028 95550854 ID=cds.MS.gene72027.t1;Parent=MS.gene72027.t1
chr3.4 exon 95551160 95551250 95551160 ID=MS.gene72027.t1.exon13;Parent=MS.gene72027.t1
chr3.4 CDS 95551160 95551250 95551160 ID=cds.MS.gene72027.t1;Parent=MS.gene72027.t1
chr3.4 exon 95551386 95551543 95551386 ID=MS.gene72027.t1.exon14;Parent=MS.gene72027.t1
chr3.4 CDS 95551386 95551543 95551386 ID=cds.MS.gene72027.t1;Parent=MS.gene72027.t1
chr3.4 exon 95551636 95551842 95551636 ID=MS.gene72027.t1.exon15;Parent=MS.gene72027.t1
chr3.4 CDS 95551636 95551842 95551636 ID=cds.MS.gene72027.t1;Parent=MS.gene72027.t1
Gene Sequence

>MS.gene72027

ATGCCTGAGTTGCGTACCCGACCTCGCATAAACCGTCTCACTGATAACGCGCCGCCGGTCGCCGGCGGGAGGAGAGCCGTCGCTGCCACCTCCGCACAGACCAGAAGGAATCGGAGGCAGAAGAAGAAGAAGAAGAACACGATCGTTGCCGAGAAAATCGAAAACATTGTGAATAACGACGACGAAACAGGAGTAGAGAGATTGAAAGAAGAGGAAGGAGAGAATAAGAAGAAGGCAGTGGTTAGGGTTTCTAGAGAGGAAGCTATGGATGAGTACGATAGTGGTGGCCGTAGTGCCGATAAAGCTCCGGGAGCCGAAGAAGAAGGGAGTACAACTCCACTTCCTGAGAAGGTGATTTTGATTCCTCAGAAATGTTCATAGTGAAGCATGCAAATGTTTTTTTTTTTCCTTCTCTATTTTTGTTTCTTGTTAATGTTTTGTTGCTAATTCGTTGTTTCTAGTTGAGTCAGACGTTATGGATTACAGCAAATTTTTTTGTTAGAAGATAATTTTTGTCATGTGTTAGGAATTTTAATGTATTTTGTTCTTTCTTAATTACAGATTCAAGTTGGTGGTTCTCCATTATATAGATTAGATAGGAAGCTTGGGAAGGGAGGATTTGGGCAAGTCTATGTTGGCCGACGCGTAGGAGCTGGTTCTGGTGCCGTTGAGGTATGTACGGTGTTTATGTCTGCCATTGTGGTGCTCCGTGATTGATACATGTTGCCATTTGGGTGTCTGAATTTTTTAATTTTGTAAGGGTTGTTACATAATATTTTAGTTGGAAAAAAAAAACTTTATAAAATGTAAGGGTGTTACGACCGTTATTTTGTGCCGAAGCAACGGGAATAGATATGGTGATTAAATAACATTGTTGTGGGAAAAAATTTGTACACCAAAGGCATCTATGACTTTTATAGATAGTTACAGATATTGCTCCAATAATTGCAGGTAGCATTAAAATTTGAGCATAGAAACAGCAAAGGGTGCAATTACGGACCTCCACATGAATGGCAGGTTTACAAGTGAGTTTACCCTCTTTTCTGTTTCAATAGAGTGGAGCTGCTTTGCTGAAGGCATTTTCTTTGCATGAATGCTAACTTTGCCATGCTCACTTTTTATAGCACATTAGGTGGTAGTCATGGTGTTCCACGAGTACATTACAAGGGACGGCAAGGTGACTACTACATTATGGTATGTGCTTGTAAGTTTTTTAATAAAGTAATGGGGGTTTCTATTGTCTCTGAAGGTTTTTGTAACATAATGTTACACACAGGTCATGGATATGCTTGGCTCTAGTCTATGGGATGTTTGGAATAACAACTCACACACGTAAGTATCTCTCTGTAATTTTATTGAAATGTAATTCATCATATTTTTTGTAAATGTCTTGGTCAATATAGCATGTCTAACCTTAGTTCTTTTTTGGATCTAGGATGTCTACTGAAATGGTGGCATGTATTGCAATCGAGGCTATCTCTATATTAGAGAAGATGCATTGTAGAGGGTGAGACTCATTTTCCTGGTTATATTATATTTATTATTTATACATGGGTTTTCTTTACTAACAGATTGTCTATGGGGCAGCCTGCTGCCTGAGTCTCGCCTTATGTTATCATTTGGGTGTTCCGTTTTTTTACCTCATGGGGAAACACGTTCAATCATCTGTTATTGACTATGCGTGTCACAATGAAACAACATAGTTTTTTTTTTTACCCCGAGGTTGAGCAACATTTATTTATGCAAAAATAAATCGGTTGGGAAACTATTACATCTGAAATTCTTCTGATTTAGCTCTGGATCATATAATAGAATTTGCTCATACTGTTTTACAAATTAAGTGTTGTGGAGGAGAGGTTTCTTGTTATCCAGAGGGGTGAGGTTTCTTTTTATCCAGTAGGGTGAGGTCCATGCTAAGGGTACCAGGATCAGTGTGTCAAGCTTAATAATTTTAACTCCCTGCAGTTTTCTCATTAGTTCAGACTGAGAGCAGGAGTTAACCCAAGTTCCACTTGCTGTGGCCTATGGGGTGAACCTGTTTGGCACCTGAGATGTGCTCATGAAAAGTTGTGCACACACTTCGTTTTGAAATTTTTCCATTACTGTATCTCAATTAAATTATTATATCATTCTGTGATTATGATAGGGACTTGGGTATTATGGGATTCATAAGTCCCAAATCAAGTAGTATGGCGTGTTGGGTGAGTATTTTAGTAGATTGGTTCTTCCTCCTTGATAGCTAGCTTTTAGGATTCCTCAAGTGCTCAGATACTTGTCATATTACAGTGTATGATCCATGCCCTCAAATTTGTTTTTGTTCTTCCCCTGCCTGCAATGGTCAATTAGTAAATACTTAAATTGCAATTATTGCTTTATCAATTACCATGCAATACCAATGTTAGTAATATAATAGATATACAAGTTTCAAATGATTTTTGTACATGTGCTCTAGTATACGTGAATTGCATCTTGTTGCAAAGATCAATTTTTCATCCTGCTGTTGTTGTTGCAGATATGTGCATGGTGATGTAAAGCCTGAAAACTTCTTGCTTGGACCCTCAGGAACCCCTGATGAGAAAAAGTTGTTTCTGGTTGATCTTGGATTAGGTAAAAAAAAGCCATGTTACCCTTTGATGCTTTCATTGTCAATGAAGATATGCTTATTCTCTCACTTTTCTACACAGCAACTCGTTGGCGTGATAGTTCAACTGGCCTTCATGTTGATTATGATCAACGCCCAGATGTATTTAGGTTTGTTCTTTATTTAGCTTCTACAAACCTTATTTAAATCAATGTATGTATGGTTTTTGAATGATTCTGTATATCATATTCTTGGCAGGGGAACAGTTCGTTATGCTAGTGTGCATGCACATCTTGGTAGAACAAGTAGCAGGAGAGATGACTTGGAATCCCTTGCTTACACTCTTGTCTTCCTTCTTCGTGGTCGGTTACCTTGGCAAGGATATCAGGTTATCTTTTTTCAAATTTGCTTATCAATTTTTTTTCTTTCAAATTTAATTACTTTAGTGTTAATACTACAAGAAAAGCATGATTCTTATGAAATTGTTTGTTACAGGGAGAAAATAAAGGATTTCTTGTCTGCAAGAAAAAGATGGCCACTTCACCCGAAGCTTTGTGTTGCTTTTGTCCTGCACCTTTCCGGCAGTTTGTAGAATATGTAGTAAATTTGAAGTTTGATGAAGAACCAAATTATGCAAAATACATATCCCTTTTTGATGGAATTGTGGGTCCAAATCCTGCAATTAGGCCCCTAAATACCGAGGGTGCTCAGAAGGTACTTGGTTTATTATTACTTTACATGTGTTATATCATTTGAGGATTCAGAGCCATACTCTTAAAGCCCTTTTATGGGTTTGTGTTGTGAAGCTTATATGTCAGGTTGGACAAAAGAGAGGACGATTGACCATGGAAGAGGATGATGATGAACAACCAAAGAAGAAGGTCCGAATGGGTCAGCCAGCAACACAGTGGATTAGTGTTTACAATGCTCGTAGACCAATGAAACAAAGGTTTTGAGCTGACATGACATGATATTTTGCTGTTATTGTATAGTTGACCCAGTTTTGACTTTCTATATTTTGGCGTAGGTATCATTACAATGTGGCCGATGAGCGGCTTTCCCAACACATTGTAAAAGGAAATGAAGATGGTTTATTTATTAGCAGTGTGGCTTCTTGTGCTAGTCTTTGGGCACTCATTATGGATGCTGGCACTGGTTTCACATCACAAGTTTACGAACTCTCTTCCAGTTTTCTTCACAAGGTTGGTTAATTTTCATTTTTCAGTTACTCTACTATCTATTATAATACAATTTTAGTGATATTTTTATTTGCGTTATATTAAATTCATTTTGAAGTTTATACAATTTGACAAATCATGAATCTGTTTCACAGGAATGGATTATGGAACAGTGGGATAAGAATTATTACATCAGTGCCATAGCTGGAGCTAGTAACGGGTCCTCATTGGTTGTAATGTCAAAAGGTTAAAGTCATATTCTTGATGCATTATATATTTAGGATGGAAACAGTTGACTTGACTATGCATTGCATGATATGACCAGTAGTGTTGTGTTTAAATCTTGTCTCACTTTTATTTGTGATCTGCTGTTCCTTACAGGGACCCAATACATGCAACAATCCTATAAAGTCAGTGACTCGTTTCCATTTAAGTGGATCAACAAAAAATGGAGGGAAGGATTTTTTGTCACTGCTATGGCCACTGCTGGCACTAGATGGGCAATTGTTATGTCCCGTGGTGCTGGATTTACAGAGCAGGTTTTTTTCTTTGTTTTAGATTGAAAATTTTGTGACAGTGAAGAATTCTATCTGACATGTATATCTTCTTTTCTCTCTAAACTCGATGCTAGGTTGTGGAACTTGATTTCCTGTACCCTAGTGAAGGTATTCATCGAAGGTGGGAAAACAATTACCGCATTACTGCAACTGCTGCAACGCCTGATCAAGCTGCTTTTATTTTAAGTGTCCCAAGAAGAAAACCACCTGATGAAACTCAAGAAACGCTCCGCACGTCTGATTTTCCTAGTACTCATGTTAAGGTAAAATTGTGCACCTGA
Protein sequence

>MS.gene72027.t1

MPELRTRPRINRLTDNAPPVAGGRRAVAATSAQTRRNRRQKKKKKNTIVAEKIENIVNNDDETGVERLKEEEGENKKKAVVRVSREEAMDEYDSGGRSADKAPGAEEEGSTTPLPEKIQVGGSPLYRLDRKLGKGGFGQVYVGRRVGAGSGAVEVALKFEHRNSKGCNYGPPHEWQVYNTLGGSHGVPRVHYKGRQGDYYIMVMDMLGSSLWDVWNNNSHTMSTEMVACIAIEAISILEKMHCRGYVHGDVKPENFLLGPSGTPDEKKLFLVDLGLATRWRDSSTGLHVDYDQRPDVFRGTVRYASVHAHLGRTSSRRDDLESLAYTLVFLLRGRLPWQGYQGENKGFLVCKKKMATSPEALCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPAIRPLNTEGAQKLICQVGQKRGRLTMEEDDDEQPKKKVRMGQPATQWISVYNARRPMKQRYHYNVADERLSQHIVKGNEDGLFISSVASCASLWALIMDAGTGFTSQVYELSSSFLHKEWIMEQWDKNYYISAIAGASNGSSLVVMSKGTQYMQQSYKVSDSFPFKWINKKWREGFFVTAMATAGTRWAIVMSRGAGFTEQVVELDFLYPSEGIHRRWENNYRITATAATPDQAAFILSVPRRKPPDETQETLRTSDFPSTHVKVKLCT