AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene72208

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72208.t1 MTR_5g073620 60.776 696 179 8 1 606 1 692 0.0 804
MS.gene72208.t1 MTR_5g073460 49.091 605 188 8 1 506 1 584 0.0 529
MS.gene72208.t1 MTR_5g073770 63.789 417 112 4 1 416 1 379 0.0 520
MS.gene72208.t1 MTR_5g073480 52.113 497 165 7 1 446 1 475 2.41e-171 501
MS.gene72208.t1 MTR_5g074130 44.786 585 201 9 2 495 3 556 9.91e-144 435
MS.gene72208.t1 MTR_5g073810 51.073 466 138 7 1 424 1 418 1.31e-139 413
MS.gene72208.t1 MTR_5g073820 47.844 487 137 11 10 462 29 432 8.39e-124 374
MS.gene72208.t1 MTR_5g073920 39.706 612 232 12 1 520 1 567 3.29e-121 375
MS.gene72208.t1 MTR_5g073650 55.556 360 110 7 67 424 5 316 4.22e-117 352
MS.gene72208.t1 MTR_3g464010 37.705 610 229 10 1 505 1 564 1.70e-111 349
MS.gene72208.t1 MTR_5g073960 46.491 456 164 9 1 416 1 416 1.70e-110 338
MS.gene72208.t1 MTR_5g073450 52.381 336 101 4 228 506 192 525 8.87e-107 336
MS.gene72208.t1 MTR_5g073610 45.063 395 115 7 1 353 1 335 2.02e-93 291
MS.gene72208.t1 MTR_3g031130 47.337 338 116 6 229 506 183 518 4.41e-88 286
MS.gene72208.t1 MTR_5g073660 48.742 318 106 6 10 320 29 296 9.79e-76 243
MS.gene72208.t1 MTR_5g073750 49.836 305 90 5 1 265 1 282 2.32e-75 242
MS.gene72208.t1 MTR_5g093530 49.286 280 77 4 2 242 3 256 6.46e-74 247
MS.gene72208.t1 MTR_5g093530 33.835 266 119 5 282 495 216 476 2.75e-27 117
MS.gene72208.t1 MTR_5g074450 53.232 263 61 7 1 213 1 251 2.17e-67 229
MS.gene72208.t1 MTR_5g073470 40.575 313 114 7 1 296 1 258 5.43e-53 182
MS.gene72208.t1 MTR_5g074190 56.284 183 44 1 4 150 1 183 1.18e-52 188
MS.gene72208.t1 MTR_5g073880 39.175 291 94 6 2 253 3 249 3.87e-50 175
MS.gene72208.t1 MTR_4g103540 30.294 340 171 4 225 503 236 570 2.73e-46 174
MS.gene72208.t1 MTR_1g090620 30.449 312 169 2 240 505 208 517 6.82e-44 166
MS.gene72208.t1 MTR_5g073840 45.175 228 72 6 7 182 7 233 1.22e-43 157
MS.gene72208.t1 MTR_1g057560 30.539 334 180 5 219 505 183 511 2.78e-42 162
MS.gene72208.t1 MTR_5g073900 46.067 178 81 3 255 431 1 164 1.41e-37 143
MS.gene72208.t1 MTR_5g074070 45.327 214 68 7 1 182 1 197 4.70e-37 139
MS.gene72208.t1 MTR_8g021330 35.714 196 123 2 237 431 161 354 1.49e-33 136
MS.gene72208.t1 MTR_5g074150 46.203 158 46 1 13 131 24 181 6.22e-33 127
MS.gene72208.t1 MTR_5g074090 45.625 160 45 2 13 131 13 171 1.12e-31 123
MS.gene72208.t1 MTR_7g013770 30.841 214 136 2 218 431 217 418 3.27e-31 129
MS.gene72208.t1 MTR_7g026630 28.889 315 156 7 255 503 228 540 4.10e-29 123
MS.gene72208.t1 MTR_5g074200 40.000 175 66 1 6 141 3 177 1.10e-27 114
MS.gene72208.t1 MTR_6g033310 28.152 341 174 7 239 510 284 622 1.16e-26 115
MS.gene72208.t1 MTR_3g025900 30.769 195 133 1 237 431 181 373 4.93e-26 113
MS.gene72208.t1 MTR_1g067480 25.513 341 174 9 237 505 166 498 2.04e-25 111
MS.gene72208.t1 MTR_1g067460 32.487 197 119 4 237 427 164 352 3.46e-25 110
MS.gene72208.t1 MTR_2g096230 29.442 197 135 2 233 427 153 347 1.03e-23 105
MS.gene72208.t1 MTR_4g062330 31.492 181 121 2 248 427 181 359 2.88e-23 104
MS.gene72208.t1 MTR_4g023690 68.852 61 19 0 42 102 26 86 6.37e-23 93.6
MS.gene72208.t1 MTR_6g078770 43.902 123 66 1 33 152 161 283 2.66e-22 99.4
MS.gene72208.t1 MTR_5g073860 30.855 269 111 9 4 226 18 257 3.93e-20 93.2
MS.gene72208.t1 MTR_6g078620 36.364 143 81 1 10 142 84 226 1.39e-19 88.6
MS.gene72208.t1 MTR_6g078610 34.659 176 75 3 17 152 593 768 5.11e-19 92.0
MS.gene72208.t1 MTR_5g067680 57.831 83 31 4 526 606 142 222 1.84e-16 81.6
MS.gene72208.t1 MTR_6g075870 36.429 140 78 2 16 144 645 784 2.48e-16 83.2
MS.gene72208.t1 MTR_5g073500 40.800 125 62 4 13 127 1 123 5.12e-16 75.5
MS.gene72208.t1 MTR_5g073850 37.209 129 61 3 13 141 1 109 2.56e-15 74.3
MS.gene72208.t1 MTR_1g117090 26.531 196 138 2 236 427 197 390 3.32e-13 73.2
MS.gene72208.t1 MTR_4g019260 48.333 60 31 0 319 378 10 69 2.81e-11 59.7
MS.gene72208.t1 MTR_5g093540 38.095 126 61 4 6 116 3 126 4.21e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72208.t1 AT5G58430 51.385 325 108 3 230 506 189 511 1.09e-94 303
MS.gene72208.t1 AT1G07000 40.367 327 143 4 230 506 171 495 1.84e-72 244
MS.gene72208.t1 AT5G50380 31.173 324 164 4 234 503 232 550 1.81e-49 183
MS.gene72208.t1 AT5G03540 31.761 318 166 4 248 516 95 410 4.65e-46 171
MS.gene72208.t1 AT5G03540 31.761 318 166 4 248 516 210 525 1.07e-45 172
MS.gene72208.t1 AT5G03540 31.761 318 166 4 248 516 236 551 2.81e-45 171
MS.gene72208.t1 AT5G52340 29.808 312 171 3 240 505 202 511 1.35e-39 154
MS.gene72208.t1 AT3G14090 27.410 332 177 7 237 506 173 502 6.27e-34 137
MS.gene72208.t1 AT1G54090 33.333 195 126 2 237 431 170 360 8.06e-32 131
MS.gene72208.t1 AT1G72470 34.031 191 122 2 243 431 184 372 3.33e-31 129
MS.gene72208.t1 AT5G52350 26.688 311 180 3 240 504 156 464 3.73e-28 119
MS.gene72208.t1 AT3G29400 31.959 194 130 1 234 427 194 385 4.04e-28 120
MS.gene72208.t1 AT5G13990 26.303 403 216 10 177 515 203 588 6.81e-27 116
MS.gene72208.t1 AT5G61010 24.841 314 175 6 238 492 205 516 1.26e-24 108
MS.gene72208.t1 AT5G61010 24.841 314 175 6 238 492 205 516 1.26e-24 108
MS.gene72208.t1 AT2G28650 26.518 313 173 5 248 505 152 462 2.86e-24 107
MS.gene72208.t1 AT5G59730 30.108 186 127 2 243 427 165 348 1.55e-23 105
MS.gene72208.t1 AT5G59730 30.108 186 127 2 243 427 165 348 1.62e-23 105
MS.gene72208.t1 AT5G13150 34.574 188 114 3 242 427 209 389 6.71e-22 100
MS.gene72208.t1 AT2G39380 30.612 196 123 2 243 427 170 363 2.00e-21 99.0
MS.gene72208.t1 AT3G55150 27.907 215 145 3 248 456 187 397 8.06e-20 94.0
MS.gene72208.t1 AT2G28640 27.717 184 131 1 241 424 153 334 7.31e-18 87.8
MS.gene72208.t1 AT1G07725 28.108 185 129 2 243 427 175 355 7.81e-18 87.8
MS.gene72208.t1 AT3G09530 26.214 206 147 3 225 427 147 350 1.57e-16 83.6
MS.gene72208.t1 AT3G09520 23.267 202 139 3 232 424 159 353 1.19e-14 77.8

Find 150 sgRNAs with CRISPR-Local

Find 183 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGAGGCCTTTGATGGTTTC+TGG 0.098731 5.2:+61971935 None:intergenic
TTTGAATAAGATTTGAATTT+TGG 0.143291 5.2:+61972044 None:intergenic
ATCGATTATTCCCCACTTTA+TGG 0.162166 5.2:-61971380 MS.gene72208:CDS
GCATCAGCCACTTCCGAATT+TGG 0.165118 5.2:+61972758 None:intergenic
TTCATACCCCTTTGATTCTT+TGG 0.188604 5.2:+61971052 None:intergenic
AGCTTTGAATTTGAGACTTC+TGG 0.192053 5.2:+61972555 None:intergenic
TGGGGTGATGCAAAGGATTA+TGG 0.227539 5.2:-61971360 MS.gene72208:CDS
CAAAATAACGACTCAAATTC+TGG 0.228835 5.2:+61971500 None:intergenic
CGCTGCAGATTTCTCCTTCA+TGG 0.235810 5.2:-61971645 MS.gene72208:CDS
CACCACTTTATCAAAGAAAA+AGG 0.235868 5.2:+61972492 None:intergenic
TGCCTAGAGCTTAGATTATT+CGG 0.241576 5.2:-61971824 MS.gene72208:CDS
CTTTGTGATCGCATCTTCTT+TGG 0.244217 5.2:-61971677 MS.gene72208:CDS
AAATTGCAGTTATTCTTTCT+TGG 0.264284 5.2:-61972322 MS.gene72208:CDS
ATTAATTAACAGCAGGAAAA+AGG 0.282805 5.2:-61970792 MS.gene72208:intron
ATATCTTCCGCACCACAATT+TGG 0.286248 5.2:-61970746 MS.gene72208:CDS
AGAGGGGCCATCGTAGAATT+TGG 0.293189 5.2:+61971307 None:intergenic
GGTTCCTAGTTCATTATCTT+TGG 0.293525 5.2:+61971235 None:intergenic
AATTGCAGTTATTCTTTCTT+GGG 0.299618 5.2:-61972321 MS.gene72208:CDS
ACGACTCAAATTCTGGAATT+AGG 0.326740 5.2:+61971507 None:intergenic
GAAAACACGCTCTGAAAGTT+TGG 0.326892 5.2:-61971190 MS.gene72208:CDS
AAATTCAGTGGTTCTTCATA+TGG 0.327593 5.2:-61972206 MS.gene72208:CDS
GGCTTTGGTTCAGCTGTTGT+TGG 0.334446 5.2:-61972712 MS.gene72208:CDS
TAAACAAACGCTCTGGTGAT+AGG 0.336644 5.2:+61971561 None:intergenic
TCGATTATTCCCCACTTTAT+GGG 0.342510 5.2:-61971379 MS.gene72208:CDS
TAATGAACTAGGAACCCTTT+TGG 0.342586 5.2:-61971228 MS.gene72208:CDS
TGTTTCCTCGAGGCCTTTGA+TGG 0.342680 5.2:+61971928 None:intergenic
AATTTCCATCTTGGAGGTTA+AGG 0.354327 5.2:+61972224 None:intergenic
CTCCTTCATGGAGATTTGTA+AGG 0.366076 5.2:-61971633 MS.gene72208:CDS
GCCTAGAGCTTAGATTATTC+GGG 0.370088 5.2:-61971823 MS.gene72208:CDS
TTCCGAATTTGGATGATGAT+AGG 0.373337 5.2:+61972769 None:intergenic
ATCAGTACGGTGTGTCTCTA+AGG 0.374174 5.2:-61971475 MS.gene72208:CDS
GGAATGAAGCAGTTACAATA+TGG 0.380641 5.2:-61971454 MS.gene72208:CDS
TATCTTCCGCACCACAATTT+GGG 0.386776 5.2:-61970745 MS.gene72208:CDS
TGGTTCAGCTGTTGTTGGAC+TGG 0.393428 5.2:-61972707 MS.gene72208:intron
GTGTGGAGATTTGTGGGCTT+TGG 0.404921 5.2:-61972727 MS.gene72208:CDS
CTCCAGGTAAACCCGTCTTT+CGG 0.405881 5.2:+61970704 None:intergenic
GTTACAATATGGAAGAGATT+GGG 0.408970 5.2:-61971443 MS.gene72208:CDS
TTCTTTGATAAAGTGGTGAA+TGG 0.409564 5.2:-61972487 MS.gene72208:CDS
CAGTTATTCTTTCTTGGGGC+AGG 0.421251 5.2:-61972316 MS.gene72208:CDS
TTCAAATCTTATTCAAATGC+TGG 0.421736 5.2:-61972038 MS.gene72208:CDS
TCACAAAGTCGTCGCTCGCC+AGG 0.421916 5.2:+61971692 None:intergenic
TAGCATCGATTCACAACAAT+TGG 0.436800 5.2:-61972131 MS.gene72208:CDS
GCTTCCCTTGGCAACAAAAT+CGG 0.437587 5.2:+61971583 None:intergenic
GAATCCAATCATTCCCCAAA+AGG 0.440716 5.2:+61971213 None:intergenic
CCAAAGGTGTGGAGATTTGT+GGG 0.442550 5.2:-61972733 MS.gene72208:CDS
ATCACTATTGTTCTCATCTC+CGG 0.442936 5.2:+61970767 None:intergenic
AATCGGCGAAATTTAGAAGT+TGG 0.443402 5.2:+61971600 None:intergenic
TACCTATCATCATCCAAATT+CGG 0.445480 5.2:-61972771 MS.gene72208:CDS
CCCACAAATCTCCACACCTT+TGG 0.450968 5.2:+61972733 None:intergenic
AGTTACAATATGGAAGAGAT+TGG 0.452243 5.2:-61971444 MS.gene72208:CDS
TCACCTTCATACCCCTTTCA+CGG 0.459744 5.2:+61971087 None:intergenic
GTCGTCGCTCGCCAGGGAAA+AGG 0.460574 5.2:+61971699 None:intergenic
GTCGAAAACTGGCCGTGAAA+GGG 0.464673 5.2:-61971099 MS.gene72208:CDS
TGTTGAAGAACACTCTCAAT+TGG 0.466544 5.2:-61971996 MS.gene72208:CDS
GAGATGAGGCTATATGAATC+TGG 0.469613 5.2:+61972460 None:intergenic
CACTTTATGGGGTGATGCAA+AGG 0.472128 5.2:-61971367 MS.gene72208:CDS
TAATTGACCGGTACATACCT+TGG 0.472871 5.2:+61970644 None:intergenic
TACGGAATCCACCGTAGAAA+AGG 0.474768 5.2:+61972261 None:intergenic
CCACTGAATTTCCATCTTGG+AGG 0.475857 5.2:+61972218 None:intergenic
CAAAGGTTATGTTGAGTGAT+GGG 0.478213 5.2:-61971904 MS.gene72208:CDS
AATTGACCGGTACATACCTT+GGG 0.480502 5.2:+61970645 None:intergenic
CACCATCGCAACGACGAGAA+AGG 0.480838 5.2:-61971004 MS.gene72208:intron
CAGTTTGCCTCGACAAGCTA+AGG 0.484595 5.2:+61972413 None:intergenic
GATAAAATGCCACCGAAAGA+CGG 0.485425 5.2:-61970716 MS.gene72208:CDS
GAACCACTGAATTTCCATCT+TGG 0.490732 5.2:+61972215 None:intergenic
CGATTATTCCCCACTTTATG+GGG 0.497356 5.2:-61971378 MS.gene72208:CDS
TAATTAATTACTTAATTGAC+CGG 0.498246 5.2:+61970632 None:intergenic
AAAGAATCAAAGGGGTATGA+AGG 0.499987 5.2:-61971050 MS.gene72208:CDS
CACCGAAAGACGGGTTTACC+TGG 0.499989 5.2:-61970706 MS.gene72208:CDS
GTAGTATGATTGAAAAGCTC+GGG 0.503496 5.2:-61972090 MS.gene72208:CDS
AAGGGGTATGAAGGTGAATG+TGG 0.504500 5.2:-61971081 MS.gene72208:CDS
AGATTGGGGCAAACAATAAG+AGG 0.504980 5.2:-61971428 MS.gene72208:CDS
CTCTGGTGATAGGCTTCCCT+TGG 0.507351 5.2:+61971571 None:intergenic
AAGAAAACAATGGGCACTAT+CGG 0.508716 5.2:-61971149 MS.gene72208:CDS
TACCTTTCTCGTCGTTGCGA+TGG 0.509409 5.2:+61971002 None:intergenic
AATCCAATCATTCCCCAAAA+GGG 0.511982 5.2:+61971214 None:intergenic
TCGATAACCATATTGAAAAG+TGG 0.514797 5.2:-61971751 MS.gene72208:CDS
GGGGTATGAAGGAGATATGC+AGG 0.515108 5.2:-61971039 MS.gene72208:CDS
GGTCAATACAAGAAAACAAT+GGG 0.515287 5.2:-61971158 MS.gene72208:CDS
GGTCGAAAACTGGCCGTGAA+AGG 0.516864 5.2:-61971100 MS.gene72208:CDS
TTATCTTCGTTCCCAAATTG+TGG 0.518605 5.2:+61970734 None:intergenic
ATAAAATGCCACCGAAAGAC+GGG 0.518679 5.2:-61970715 MS.gene72208:CDS
CTTTGCATCACCCCATAAAG+TGG 0.522174 5.2:+61971368 None:intergenic
GCAAAGGTTATGTTGAGTGA+TGG 0.523762 5.2:-61971905 MS.gene72208:CDS
TTCTACGATGGCCCCTCTCT+AGG 0.524336 5.2:-61971302 MS.gene72208:CDS
GGGTTTACCTGGAGAAAATA+CGG 0.528343 5.2:-61970695 MS.gene72208:CDS
TGGCCGTGAAAGGGGTATGA+AGG 0.531406 5.2:-61971090 MS.gene72208:CDS
ACCTTGGGTATTTGAAGCCA+AGG 0.538634 5.2:+61970660 None:intergenic
TCCTTCATGGAGATTTGTAA+GGG 0.539738 5.2:-61971632 MS.gene72208:CDS
GCCAAAGGTGTGGAGATTTG+TGG 0.545731 5.2:-61972734 MS.gene72208:CDS
TTGGTGATCAGTACTGATAT+TGG 0.546097 5.2:-61972112 MS.gene72208:CDS
CAGTACCTTAACCTCCAAGA+TGG 0.549038 5.2:-61972229 MS.gene72208:CDS
GGTAGTATGATTGAAAAGCT+CGG 0.550416 5.2:-61972091 MS.gene72208:CDS
GGAGGTTCCAAAGAATCAAA+GGG 0.550547 5.2:-61971059 MS.gene72208:CDS
TATCGGCTCCGAATCAGTGC+AGG 0.553602 5.2:-61971132 MS.gene72208:CDS
AGGGGTATGAAGGTGAATGT+GGG 0.556231 5.2:-61971080 MS.gene72208:CDS
GCAAAGGATTATGGACACAT+TGG 0.556276 5.2:-61971351 MS.gene72208:CDS
AAATCTTATTCAAATGCTGG+TGG 0.558758 5.2:-61972035 MS.gene72208:CDS
GGGAGGTTCCAAAGAATCAA+AGG 0.564686 5.2:-61971060 MS.gene72208:CDS
TTGCAACTACTAGCGATAGC+AGG 0.565320 5.2:-61972156 MS.gene72208:CDS
TCATCATCCAAATTCGGAAG+TGG 0.565813 5.2:-61972765 MS.gene72208:CDS
TACGGCAAGAAAGAGATCCT+TGG 0.571266 5.2:-61970677 MS.gene72208:CDS
AAGAAAATATAGCCTAGAGA+GGG 0.573467 5.2:+61971290 None:intergenic
TCCCTTACAAATCTCCATGA+AGG 0.574133 5.2:+61971631 None:intergenic
CAAATACCCAAGGTATGTAC+CGG 0.579257 5.2:-61970651 MS.gene72208:CDS
CACAAAGTCGTCGCTCGCCA+GGG 0.581520 5.2:+61971693 None:intergenic
GACCGACTCTAACTTCATGA+TGG 0.581711 5.2:-61971969 MS.gene72208:CDS
CATTCATAGTATGCCATGGA+AGG 0.582799 5.2:-61971777 MS.gene72208:CDS
ATGTGTACAATAATTGCCGT+AGG 0.582960 5.2:-61971862 MS.gene72208:CDS
CAAGAAAATATAGCCTAGAG+AGG 0.585806 5.2:+61971289 None:intergenic
CGGTCAATACAAGAAAACAA+TGG 0.587580 5.2:-61971159 MS.gene72208:CDS
ATTGCAGTTATTCTTTCTTG+GGG 0.588625 5.2:-61972320 MS.gene72208:CDS
AAGGTACTGATTATCTCCTA+CGG 0.591584 5.2:+61972243 None:intergenic
ATGACCAAAGATAATGAACT+AGG 0.592112 5.2:-61971239 MS.gene72208:CDS
TTTGCATCACCCCATAAAGT+GGG 0.595593 5.2:+61971369 None:intergenic
TCGAAAACTGGCCGTGAAAG+GGG 0.597451 5.2:-61971098 MS.gene72208:CDS
ACCCGAATAATCTAAGCTCT+AGG 0.597703 5.2:+61971822 None:intergenic
GTTGAGTGATGGGTTTGAGA+AGG 0.601587 5.2:-61971894 MS.gene72208:CDS
AGGACATTCATAGTATGCCA+TGG 0.602167 5.2:-61971781 MS.gene72208:CDS
CCTCCAAGATGGAAATTCAG+TGG 0.604053 5.2:-61972218 MS.gene72208:CDS
TTCGTTCCCAAATTGTGGTG+CGG 0.605047 5.2:+61970739 None:intergenic
CAGGTAAACCCGTCTTTCGG+TGG 0.613477 5.2:+61970707 None:intergenic
GGTATGAAGGTGAATGTGGG+AGG 0.614369 5.2:-61971077 MS.gene72208:CDS
TTACAATATGGAAGAGATTG+GGG 0.617743 5.2:-61971442 MS.gene72208:CDS
GGCTGATGCAGCCAAAGGTG+TGG 0.618428 5.2:-61972744 MS.gene72208:CDS
GAAATTTAGAAGTTGGATGA+CGG 0.621698 5.2:+61971607 None:intergenic
CTGAAGCCAGAAACCATCAA+AGG 0.622060 5.2:-61971941 MS.gene72208:CDS
GCGTTTGTTTAAAATGCTCG+AGG 0.622531 5.2:-61971549 MS.gene72208:CDS
ATCCATCATGAAGTTAGAGT+CGG 0.626322 5.2:+61971967 None:intergenic
TCATGTCCCTTAGCTTGTCG+AGG 0.632134 5.2:-61972420 MS.gene72208:CDS
TGTGTACAATAATTGCCGTA+GGG 0.634651 5.2:-61971861 MS.gene72208:CDS
GAAGTGGCTGATGCAGCCAA+AGG 0.635287 5.2:-61972749 MS.gene72208:CDS
TCCTTGGCTTCAAATACCCA+AGG 0.635687 5.2:-61970661 MS.gene72208:CDS
TTGTCGAGGCAAACTGAGTG+CGG 0.638955 5.2:-61972406 MS.gene72208:CDS
GCTAAGGGACATGATAGCAA+AGG 0.639617 5.2:+61972429 None:intergenic
TGGTTATCGAGATCCTTCCA+TGG 0.644236 5.2:+61971764 None:intergenic
AGTTTGCCTCGACAAGCTAA+GGG 0.647276 5.2:+61972414 None:intergenic
CAAAGGCAACACATGAGATG+AGG 0.648422 5.2:+61972446 None:intergenic
AGGCCTCGAGGAAACAGCAA+AGG 0.649096 5.2:-61971921 MS.gene72208:CDS
TAACCTTTGCTGTTTCCTCG+AGG 0.661444 5.2:+61971918 None:intergenic
AAAGCTCGGGACTTATGTGA+AGG 0.663558 5.2:-61972077 MS.gene72208:CDS
GCAAGTTCCAAATTCTACGA+TGG 0.664577 5.2:-61971314 MS.gene72208:CDS
TGAAGAACACTCTCAATTGG+TGG 0.668975 5.2:-61971993 MS.gene72208:CDS
AGAAAATATAGCCTAGAGAG+GGG 0.678048 5.2:+61971291 None:intergenic
ACTCGTTCAAGCAATCCCTA+CGG 0.679495 5.2:+61971846 None:intergenic
CTGAAAGTTTGGCACTACGA+CGG 0.682297 5.2:-61971179 MS.gene72208:CDS
TTGCATCACCCCATAAAGTG+GGG 0.689193 5.2:+61971370 None:intergenic
GTTGCAAAAGCTCAACATCG+AGG 0.726407 5.2:-61971801 MS.gene72208:CDS
AGAAACCATCAAAGGCCTCG+AGG 0.730932 5.2:-61971933 MS.gene72208:CDS
GAGGTTCCAAAGAATCAAAG+GGG 0.760630 5.2:-61971058 MS.gene72208:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAAGTTTAATTCCAAAA+TGG - chr5.2:61972527-61972546 MS.gene72208:CDS 15.0%
!!! TTTGAATAAGATTTGAATTT+TGG + chr5.2:61971377-61971396 None:intergenic 15.0%
!!! GATCTTCTTTATTTTTTTCT+TGG - chr5.2:61971045-61971064 MS.gene72208:CDS 20.0%
! AAATTGCAGTTATTCTTTCT+TGG - chr5.2:61971096-61971115 MS.gene72208:CDS 25.0%
! AATTGCAGTTATTCTTTCTT+GGG - chr5.2:61971097-61971116 MS.gene72208:CDS 25.0%
! ATTAATTAACAGCAGGAAAA+AGG - chr5.2:61972626-61972645 MS.gene72208:intron 25.0%
! ATTTCCAAATAGATAGTTGA+AGG + chr5.2:61970758-61970777 None:intergenic 25.0%
! GAGTCAAAAGAAATATAAAG+AGG + chr5.2:61972560-61972579 None:intergenic 25.0%
! TCAACTATCTATTTGGAAAT+TGG - chr5.2:61970758-61970777 MS.gene72208:CDS 25.0%
! TTCAAATCTTATTCAAATGC+TGG - chr5.2:61971380-61971399 MS.gene72208:CDS 25.0%
!! AACAATAAGAGGAATTTTCA+TGG - chr5.2:61972001-61972020 MS.gene72208:CDS 25.0%
!! ATCATAATTTGCATCAAGTA+TGG + chr5.2:61972488-61972507 None:intergenic 25.0%
!! TTCCTTTTTCTTTGATAAAG+TGG - chr5.2:61970924-61970943 MS.gene72208:intron 25.0%
!!! AAGAATTTTAGTTGTTTCAC+AGG - chr5.2:61972457-61972476 MS.gene72208:CDS 25.0%
!!! CTTTAATCCACTTTTCAATA+TGG + chr5.2:61971677-61971696 None:intergenic 25.0%
AAATCTTATTCAAATGCTGG+TGG - chr5.2:61971383-61971402 MS.gene72208:CDS 30.0%
AAATTCAGTGGTTCTTCATA+TGG - chr5.2:61971212-61971231 MS.gene72208:CDS 30.0%
AAGAAAATATAGCCTAGAGA+GGG + chr5.2:61972131-61972150 None:intergenic 30.0%
AGTTACAATATGGAAGAGAT+TGG - chr5.2:61971974-61971993 MS.gene72208:CDS 30.0%
ATGACCAAAGATAATGAACT+AGG - chr5.2:61972179-61972198 MS.gene72208:CDS 30.0%
ATTGCAGTTATTCTTTCTTG+GGG - chr5.2:61971098-61971117 MS.gene72208:CDS 30.0%
CAAAATAACGACTCAAATTC+TGG + chr5.2:61971921-61971940 None:intergenic 30.0%
CACCACTTTATCAAAGAAAA+AGG + chr5.2:61970929-61970948 None:intergenic 30.0%
GAAATTTAGAAGTTGGATGA+CGG + chr5.2:61971814-61971833 None:intergenic 30.0%
GGTCAATACAAGAAAACAAT+GGG - chr5.2:61972260-61972279 MS.gene72208:CDS 30.0%
GTTACAATATGGAAGAGATT+GGG - chr5.2:61971975-61971994 MS.gene72208:CDS 30.0%
TACCTATCATCATCCAAATT+CGG - chr5.2:61970647-61970666 MS.gene72208:CDS 30.0%
TCGATAACCATATTGAAAAG+TGG - chr5.2:61971667-61971686 MS.gene72208:CDS 30.0%
TCTTCCTTCAACTATCTATT+TGG - chr5.2:61970751-61970770 MS.gene72208:CDS 30.0%
TCTTCGTATTAATTAACAGC+AGG - chr5.2:61972619-61972638 MS.gene72208:intron 30.0%
TTACAATATGGAAGAGATTG+GGG - chr5.2:61971976-61971995 MS.gene72208:CDS 30.0%
TTCTTTGATAAAGTGGTGAA+TGG - chr5.2:61970931-61970950 MS.gene72208:intron 30.0%
!! TCGTTATTTTGTGATCAGTA+CGG - chr5.2:61971930-61971949 MS.gene72208:CDS 30.0%
AAGAAAACAATGGGCACTAT+CGG - chr5.2:61972269-61972288 MS.gene72208:CDS 35.0%
AATCCAATCATTCCCCAAAA+GGG + chr5.2:61972207-61972226 None:intergenic 35.0%
AATCGGCGAAATTTAGAAGT+TGG + chr5.2:61971821-61971840 None:intergenic 35.0%
AATTTCCATCTTGGAGGTTA+AGG + chr5.2:61971197-61971216 None:intergenic 35.0%
AGAAAATATAGCCTAGAGAG+GGG + chr5.2:61972130-61972149 None:intergenic 35.0%
ATCACTATTGTTCTCATCTC+CGG + chr5.2:61972654-61972673 None:intergenic 35.0%
ATCCATCATGAAGTTAGAGT+CGG + chr5.2:61971454-61971473 None:intergenic 35.0%
ATCGATTATTCCCCACTTTA+TGG - chr5.2:61972038-61972057 MS.gene72208:CDS 35.0%
ATGTGTACAATAATTGCCGT+AGG - chr5.2:61971556-61971575 MS.gene72208:CDS 35.0%
CAAAGGTTATGTTGAGTGAT+GGG - chr5.2:61971514-61971533 MS.gene72208:CDS 35.0%
CAAGAAAATATAGCCTAGAG+AGG + chr5.2:61972132-61972151 None:intergenic 35.0%
CGGTCAATACAAGAAAACAA+TGG - chr5.2:61972259-61972278 MS.gene72208:CDS 35.0%
GGAATGAAGCAGTTACAATA+TGG - chr5.2:61971964-61971983 MS.gene72208:CDS 35.0%
GGTAGTATGATTGAAAAGCT+CGG - chr5.2:61971327-61971346 MS.gene72208:CDS 35.0%
GGTTCCTAGTTCATTATCTT+TGG + chr5.2:61972186-61972205 None:intergenic 35.0%
GTAGTATGATTGAAAAGCTC+GGG - chr5.2:61971328-61971347 MS.gene72208:CDS 35.0%
TCCTTCATGGAGATTTGTAA+GGG - chr5.2:61971786-61971805 MS.gene72208:CDS 35.0%
TCGATTATTCCCCACTTTAT+GGG - chr5.2:61972039-61972058 MS.gene72208:CDS 35.0%
TGCCTAGAGCTTAGATTATT+CGG - chr5.2:61971594-61971613 MS.gene72208:CDS 35.0%
TGTGTACAATAATTGCCGTA+GGG - chr5.2:61971557-61971576 MS.gene72208:CDS 35.0%
TGTTGAAGAACACTCTCAAT+TGG - chr5.2:61971422-61971441 MS.gene72208:CDS 35.0%
TTATCTTCGTTCCCAAATTG+TGG + chr5.2:61972687-61972706 None:intergenic 35.0%
TTCATACCCCTTTGATTCTT+TGG + chr5.2:61972369-61972388 None:intergenic 35.0%
TTCCGAATTTGGATGATGAT+AGG + chr5.2:61970652-61970671 None:intergenic 35.0%
! AAAGAATCAAAGGGGTATGA+AGG - chr5.2:61972368-61972387 MS.gene72208:CDS 35.0%
! AAGAGGAATTTTCATGGAGT+TGG - chr5.2:61972007-61972026 MS.gene72208:CDS 35.0%
! AATGAACTAGGAACCCTTTT+GGG - chr5.2:61972191-61972210 MS.gene72208:CDS 35.0%
! AGCATTTTAAACAAACGCTC+TGG + chr5.2:61971867-61971886 None:intergenic 35.0%
! CAAAGCTCATACAGCATTTT+TGG - chr5.2:61970879-61970898 MS.gene72208:intron 35.0%
! TAATGAACTAGGAACCCTTT+TGG - chr5.2:61972190-61972209 MS.gene72208:CDS 35.0%
! TCTTCGTTCTTCCTTTTCTA+CGG - chr5.2:61971146-61971165 MS.gene72208:CDS 35.0%
! TGGGTTTGAGAAGGAATTTT+CGG - chr5.2:61971533-61971552 MS.gene72208:CDS 35.0%
!! AAGGTACTGATTATCTCCTA+CGG + chr5.2:61971178-61971197 None:intergenic 35.0%
!! ACGACTCAAATTCTGGAATT+AGG + chr5.2:61971914-61971933 None:intergenic 35.0%
!! AGCTTTGAATTTGAGACTTC+TGG + chr5.2:61970866-61970885 None:intergenic 35.0%
!! GAAAAAATCCTGCACTGATT+CGG + chr5.2:61972297-61972316 None:intergenic 35.0%
!! TAGCATCGATTCACAACAAT+TGG - chr5.2:61971287-61971306 MS.gene72208:CDS 35.0%
!! TTGGTGATCAGTACTGATAT+TGG - chr5.2:61971306-61971325 MS.gene72208:CDS 35.0%
!!! AATCAGTGCAGGATTTTTTC+CGG - chr5.2:61972297-61972316 MS.gene72208:CDS 35.0%
AATTGACCGGTACATACCTT+GGG + chr5.2:61972776-61972795 None:intergenic 40.0%
ACCCGAATAATCTAAGCTCT+AGG + chr5.2:61971599-61971618 None:intergenic 40.0%
AGATTGGGGCAAACAATAAG+AGG - chr5.2:61971990-61972009 MS.gene72208:CDS 40.0%
AGGACATTCATAGTATGCCA+TGG - chr5.2:61971637-61971656 MS.gene72208:CDS 40.0%
ATAAAATGCCACCGAAAGAC+GGG - chr5.2:61972703-61972722 MS.gene72208:intron 40.0%
ATATCTTCCGCACCACAATT+TGG - chr5.2:61972672-61972691 MS.gene72208:intron 40.0%
CAAATACCCAAGGTATGTAC+CGG - chr5.2:61972767-61972786 MS.gene72208:CDS 40.0%
CATTCATAGTATGCCATGGA+AGG - chr5.2:61971641-61971660 MS.gene72208:CDS 40.0%
CGATTATTCCCCACTTTATG+GGG - chr5.2:61972040-61972059 MS.gene72208:CDS 40.0%
CTCCTTCATGGAGATTTGTA+AGG - chr5.2:61971785-61971804 MS.gene72208:CDS 40.0%
CTTTGTGATCGCATCTTCTT+TGG - chr5.2:61971741-61971760 MS.gene72208:CDS 40.0%
GAACCACTGAATTTCCATCT+TGG + chr5.2:61971206-61971225 None:intergenic 40.0%
GAATCCAATCATTCCCCAAA+AGG + chr5.2:61972208-61972227 None:intergenic 40.0%
GAGATGAGGCTATATGAATC+TGG + chr5.2:61970961-61970980 None:intergenic 40.0%
GAGGTTCCAAAGAATCAAAG+GGG - chr5.2:61972360-61972379 MS.gene72208:CDS 40.0%
GATAAAATGCCACCGAAAGA+CGG - chr5.2:61972702-61972721 MS.gene72208:intron 40.0%
GCAAAGGATTATGGACACAT+TGG - chr5.2:61972067-61972086 MS.gene72208:CDS 40.0%
GCAAAGGTTATGTTGAGTGA+TGG - chr5.2:61971513-61971532 MS.gene72208:CDS 40.0%
GCAAGTTCCAAATTCTACGA+TGG - chr5.2:61972104-61972123 MS.gene72208:CDS 40.0%
GCCTAGAGCTTAGATTATTC+GGG - chr5.2:61971595-61971614 MS.gene72208:CDS 40.0%
GGAGGTTCCAAAGAATCAAA+GGG - chr5.2:61972359-61972378 MS.gene72208:CDS 40.0%
GGGTTTACCTGGAGAAAATA+CGG - chr5.2:61972723-61972742 MS.gene72208:CDS 40.0%
TAAACAAACGCTCTGGTGAT+AGG + chr5.2:61971860-61971879 None:intergenic 40.0%
TAACAGCAGGAAAAAGGATC+CGG - chr5.2:61972632-61972651 MS.gene72208:intron 40.0%
TAATTGACCGGTACATACCT+TGG + chr5.2:61972777-61972796 None:intergenic 40.0%
TATCTTCCGCACCACAATTT+GGG - chr5.2:61972673-61972692 MS.gene72208:intron 40.0%
TCATCATCCAAATTCGGAAG+TGG - chr5.2:61970653-61970672 MS.gene72208:CDS 40.0%
TCCCTTACAAATCTCCATGA+AGG + chr5.2:61971790-61971809 None:intergenic 40.0%
TGAAGAACACTCTCAATTGG+TGG - chr5.2:61971425-61971444 MS.gene72208:CDS 40.0%
TTTGCATCACCCCATAAAGT+GGG + chr5.2:61972052-61972071 None:intergenic 40.0%
! AGGAATTTTCATGGAGTTGG+AGG - chr5.2:61972010-61972029 MS.gene72208:CDS 40.0%
! ATGAACTAGGAACCCTTTTG+GGG - chr5.2:61972192-61972211 MS.gene72208:CDS 40.0%
! GCGTTTGTTTAAAATGCTCG+AGG - chr5.2:61971869-61971888 MS.gene72208:CDS 40.0%
! TTTCTTGCCGTATTTTCTCC+AGG + chr5.2:61972733-61972752 None:intergenic 40.0%
!! GAAAACACGCTCTGAAAGTT+TGG - chr5.2:61972228-61972247 MS.gene72208:CDS 40.0%
!!! AAAGAGGCATTCAGCCATTT+TGG + chr5.2:61972544-61972563 None:intergenic 40.0%
!!! GATTTTTTCCGGTCGAAAAC+TGG - chr5.2:61972308-61972327 MS.gene72208:CDS 40.0%
AAAGCTCGGGACTTATGTGA+AGG - chr5.2:61971341-61971360 MS.gene72208:CDS 45.0%
ACTCGTTCAAGCAATCCCTA+CGG + chr5.2:61971575-61971594 None:intergenic 45.0%
AGTTTGCCTCGACAAGCTAA+GGG + chr5.2:61971007-61971026 None:intergenic 45.0%
ATCAGTACGGTGTGTCTCTA+AGG - chr5.2:61971943-61971962 MS.gene72208:CDS 45.0%
CAAAGGCAACACATGAGATG+AGG + chr5.2:61970975-61970994 None:intergenic 45.0%
CACTTTATGGGGTGATGCAA+AGG - chr5.2:61972051-61972070 MS.gene72208:CDS 45.0%
CAGTACCTTAACCTCCAAGA+TGG - chr5.2:61971189-61971208 MS.gene72208:CDS 45.0%
CAGTTATTCTTTCTTGGGGC+AGG - chr5.2:61971102-61971121 MS.gene72208:CDS 45.0%
CCACTGAATTTCCATCTTGG+AGG + chr5.2:61971203-61971222 None:intergenic 45.0%
CCTCCAAGATGGAAATTCAG+TGG - chr5.2:61971200-61971219 MS.gene72208:CDS 45.0%
CTGAAAGTTTGGCACTACGA+CGG - chr5.2:61972239-61972258 MS.gene72208:CDS 45.0%
CTGAAGCCAGAAACCATCAA+AGG - chr5.2:61971477-61971496 MS.gene72208:CDS 45.0%
CTTTGCATCACCCCATAAAG+TGG + chr5.2:61972053-61972072 None:intergenic 45.0%
GCTAAGGGACATGATAGCAA+AGG + chr5.2:61970992-61971011 None:intergenic 45.0%
GCTTCCCTTGGCAACAAAAT+CGG + chr5.2:61971838-61971857 None:intergenic 45.0%
GGGAGGTTCCAAAGAATCAA+AGG - chr5.2:61972358-61972377 MS.gene72208:CDS 45.0%
GTTGCAAAAGCTCAACATCG+AGG - chr5.2:61971617-61971636 MS.gene72208:CDS 45.0%
TACGGAATCCACCGTAGAAA+AGG + chr5.2:61971160-61971179 None:intergenic 45.0%
TACGGCAAGAAAGAGATCCT+TGG - chr5.2:61972741-61972760 MS.gene72208:CDS 45.0%
TCACCTTCATACCCCTTTCA+CGG + chr5.2:61972334-61972353 None:intergenic 45.0%
TCCTTGGCTTCAAATACCCA+AGG - chr5.2:61972757-61972776 MS.gene72208:CDS 45.0%
TGGGGTGATGCAAAGGATTA+TGG - chr5.2:61972058-61972077 MS.gene72208:CDS 45.0%
TGGTTATCGAGATCCTTCCA+TGG + chr5.2:61971657-61971676 None:intergenic 45.0%
TTCGTTCCCAAATTGTGGTG+CGG + chr5.2:61972682-61972701 None:intergenic 45.0%
TTGCAACTACTAGCGATAGC+AGG - chr5.2:61971262-61971281 MS.gene72208:CDS 45.0%
TTGCATCACCCCATAAAGTG+GGG + chr5.2:61972051-61972070 None:intergenic 45.0%
! AAGGGGTATGAAGGTGAATG+TGG - chr5.2:61972337-61972356 MS.gene72208:CDS 45.0%
! ACCTTGGGTATTTGAAGCCA+AGG + chr5.2:61972761-61972780 None:intergenic 45.0%
! AGGGGTATGAAGGTGAATGT+GGG - chr5.2:61972338-61972357 MS.gene72208:CDS 45.0%
! CCAAAGGTGTGGAGATTTGT+GGG - chr5.2:61970685-61970704 MS.gene72208:CDS 45.0%
! GACCGACTCTAACTTCATGA+TGG - chr5.2:61971449-61971468 MS.gene72208:CDS 45.0%
! TCGTTCTTCCTTTTCTACGG+TGG - chr5.2:61971149-61971168 MS.gene72208:CDS 45.0%
!! GAACCCTTTTGGGGAATGAT+TGG - chr5.2:61972201-61972220 MS.gene72208:CDS 45.0%
!! GTTGAGTGATGGGTTTGAGA+AGG - chr5.2:61971524-61971543 MS.gene72208:CDS 45.0%
!! TAACCTTTGCTGTTTCCTCG+AGG + chr5.2:61971503-61971522 None:intergenic 45.0%
!! TTTTCTACGGTGGATTCCGT+AGG - chr5.2:61971159-61971178 MS.gene72208:CDS 45.0%
!!! TTCGCCGATTTTGTTGCCAA+GGG - chr5.2:61971831-61971850 MS.gene72208:CDS 45.0%
!!! TTTCGCCGATTTTGTTGCCA+AGG - chr5.2:61971830-61971849 MS.gene72208:CDS 45.0%
AGAAACCATCAAAGGCCTCG+AGG - chr5.2:61971485-61971504 MS.gene72208:CDS 50.0%
AGAGGGGCCATCGTAGAATT+TGG + chr5.2:61972114-61972133 None:intergenic 50.0%
CAGTTTGCCTCGACAAGCTA+AGG + chr5.2:61971008-61971027 None:intergenic 50.0%
CCCACAAATCTCCACACCTT+TGG + chr5.2:61970688-61970707 None:intergenic 50.0%
CGCTGCAGATTTCTCCTTCA+TGG - chr5.2:61971773-61971792 MS.gene72208:CDS 50.0%
CTCCAGGTAAACCCGTCTTT+CGG + chr5.2:61972717-61972736 None:intergenic 50.0%
GCATCAGCCACTTCCGAATT+TGG + chr5.2:61970663-61970682 None:intergenic 50.0%
GGGGTATGAAGGAGATATGC+AGG - chr5.2:61972379-61972398 MS.gene72208:CDS 50.0%
GGTATGAAGGTGAATGTGGG+AGG - chr5.2:61972341-61972360 MS.gene72208:CDS 50.0%
GTCGAAAACTGGCCGTGAAA+GGG - chr5.2:61972319-61972338 MS.gene72208:CDS 50.0%
GTGTGGAGATTTGTGGGCTT+TGG - chr5.2:61970691-61970710 MS.gene72208:CDS 50.0%
TACCTTTCTCGTCGTTGCGA+TGG + chr5.2:61972419-61972438 None:intergenic 50.0%
TCGAAAACTGGCCGTGAAAG+GGG - chr5.2:61972320-61972339 MS.gene72208:CDS 50.0%
TGGTTCAGCTGTTGTTGGAC+TGG - chr5.2:61970711-61970730 MS.gene72208:CDS 50.0%
TGTTTCCTCGAGGCCTTTGA+TGG + chr5.2:61971493-61971512 None:intergenic 50.0%
TTGTCGAGGCAAACTGAGTG+CGG - chr5.2:61971012-61971031 MS.gene72208:CDS 50.0%
! GCAGTCAAGATCCTTTTCCC+TGG - chr5.2:61971708-61971727 MS.gene72208:CDS 50.0%
! GCCAAAGGTGTGGAGATTTG+TGG - chr5.2:61970684-61970703 MS.gene72208:CDS 50.0%
! GGCTTTGGTTCAGCTGTTGT+TGG - chr5.2:61970706-61970725 MS.gene72208:CDS 50.0%
! TCGAGGCCTTTGATGGTTTC+TGG + chr5.2:61971486-61971505 None:intergenic 50.0%
! TTTCACGGCCAGTTTTCGAC+CGG + chr5.2:61972319-61972338 None:intergenic 50.0%
!! TCATGTCCCTTAGCTTGTCG+AGG - chr5.2:61970998-61971017 MS.gene72208:intron 50.0%
AGGCCTCGAGGAAACAGCAA+AGG - chr5.2:61971497-61971516 MS.gene72208:CDS 55.0%
CACCATCGCAACGACGAGAA+AGG - chr5.2:61972414-61972433 MS.gene72208:CDS 55.0%
CAGGTAAACCCGTCTTTCGG+TGG + chr5.2:61972714-61972733 None:intergenic 55.0%
CTCTGGTGATAGGCTTCCCT+TGG + chr5.2:61971850-61971869 None:intergenic 55.0%
GAAGTGGCTGATGCAGCCAA+AGG - chr5.2:61970669-61970688 MS.gene72208:CDS 55.0%
GGTCGAAAACTGGCCGTGAA+AGG - chr5.2:61972318-61972337 MS.gene72208:CDS 55.0%
TTCTACGATGGCCCCTCTCT+AGG - chr5.2:61972116-61972135 MS.gene72208:CDS 55.0%
! CACCGAAAGACGGGTTTACC+TGG - chr5.2:61972712-61972731 MS.gene72208:CDS 55.0%
! TGGCCGTGAAAGGGGTATGA+AGG - chr5.2:61972328-61972347 MS.gene72208:CDS 55.0%
!! TATCGGCTCCGAATCAGTGC+AGG - chr5.2:61972286-61972305 MS.gene72208:CDS 55.0%
CACAAAGTCGTCGCTCGCCA+GGG + chr5.2:61971728-61971747 None:intergenic 60.0%
GGCTGATGCAGCCAAAGGTG+TGG - chr5.2:61970674-61970693 MS.gene72208:CDS 60.0%
TCACAAAGTCGTCGCTCGCC+AGG + chr5.2:61971729-61971748 None:intergenic 60.0%
GTCGTCGCTCGCCAGGGAAA+AGG + chr5.2:61971722-61971741 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 61970643 61972797 61970643 ID=MS.gene72208
chr5.2 mRNA 61970643 61972797 61970643 ID=MS.gene72208.t1;Parent=MS.gene72208
chr5.2 exon 61972708 61972797 61972708 ID=MS.gene72208.t1.exon1;Parent=MS.gene72208.t1
chr5.2 CDS 61972708 61972797 61972708 ID=cds.MS.gene72208.t1;Parent=MS.gene72208.t1
chr5.2 exon 61971005 61972590 61971005 ID=MS.gene72208.t1.exon2;Parent=MS.gene72208.t1
chr5.2 CDS 61971005 61972590 61971005 ID=cds.MS.gene72208.t1;Parent=MS.gene72208.t1
chr5.2 exon 61970643 61970802 61970643 ID=MS.gene72208.t1.exon3;Parent=MS.gene72208.t1
chr5.2 CDS 61970643 61970802 61970643 ID=cds.MS.gene72208.t1;Parent=MS.gene72208.t1
Gene Sequence

>MS.gene72208

ATGATACCTATCATCATCCAAATTCGGAAGTGGCTGATGCAGCCAAAGGTGTGGAGATTTGTGGGCTTTGGTTCAGCTGTTGTTGGACTGGTTTGTTATGCTCTAAGCTCTTCCTTCAACTATCTATTTGGAAATTGGAATATGTTGAAAATATTTCTTTATATAGTTTTCAGTTTCATCATCTGCTTGATGATTTTATTTGCAAAGATATTGCAATATTCCAGAAGTCTCAAATTCAAAGCTCATACAGCATTTTTGGTATTGACAATCACTTCAGTCTATTCCTTTTTCTTTGATAAAGTGGTGAATGGAAAACCAGATTCATATAGCCTCATCTCATGTGTTGCCTTTGCTATCATGTCCCTTAGCTTGTCGAGGCAAACTGAGTGCGGATTTGAAGTTGATCTTCTTTATTTTTTTCTTGGTTGTCTGATTGTGCAACTCATGAAGATTAAATTGCAGTTATTCTTTCTTGGGGCAGGTTTCAGTTATTCTCTTATTATTCTTCGTTCTTCCTTTTCTACGGTGGATTCCGTAGGAGATAATCAGTACCTTAACCTCCAAGATGGAAATTCAGTGGTTCTTCATATGGATTCTCTACAACTAGCTAGTACTAATATTGCAACTACTAGCGATAGCAGGAATAGCATCGATTCACAACAATTGGTGATCAGTACTGATATTGGTAGTATGATTGAAAAGCTCGGGACTTATGTGAAGGCGCTTCAGCACCAAAATTCAAATCTTATTCAAATGCTGGTGGAGCATGTAAAAAAATATGTTGAAGAACACTCTCAATTGGTGGTGACCGACTCTAACTTCATGATGGATGCGCTGAAGCCAGAAACCATCAAAGGCCTCGAGGAAACAGCAAAGGTTATGTTGAGTGATGGGTTTGAGAAGGAATTTTCGGATGTGTACAATAATTGCCGTAGGGATTGCTTGAACGAGTGCCTAGAGCTTAGATTATTCGGGTTGCAAAAGCTCAACATCGAGGACATTCATAGTATGCCATGGAAGGATCTCGATAACCATATTGAAAAGTGGATTAAAGCTTTCAATGTCGCAGTCAAGATCCTTTTCCCTGGCGAGCGACGACTTTGTGATCGCATCTTCTTTGGATACTCACACGCTGCAGATTTCTCCTTCATGGAGATTTGTAAGGGATCCGTCATCCAACTTCTAAATTTCGCCGATTTTGTTGCCAAGGGAAGCCTATCACCAGAGCGTTTGTTTAAAATGCTCGAGGTGTTTGAAACATTGTGTGACCTAATTCCAGAATTTGAGTCGTTATTTTGTGATCAGTACGGTGTGTCTCTAAGGAATGAAGCAGTTACAATATGGAAGAGATTGGGGCAAACAATAAGAGGAATTTTCATGGAGTTGGAGGATCTGATCGATTATTCCCCACTTTATGGGGTGATGCAAAGGATTATGGACACATTGGAGAGCAATTTTAATGCAAGTTCCAAATTCTACGATGGCCCCTCTCTAGGCTATATTTTCTTGATGAATAATGACACATACATAGTTCACATGACCAAAGATAATGAACTAGGAACCCTTTTGGGGAATGATTGGATTCGAAAACACGCTCTGAAAGTTTGGCACTACGACGGTCAATACAAGAAAACAATGGGCACTATCGGCTCCGAATCAGTGCAGGATTTTTTCCGGTCGAAAACTGGCCGTGAAAGGGGTATGAAGGTGAATGTGGGAGGTTCCAAAGAATCAAAGGGGTATGAAGGAGATATGCAGGAAATAGAAGCATCACCATCGCAACGACGAGAAAGGTATGTATTACATAAAGTTTGAAGAATTTTAGTTGTTTCACAGGAGTTACCATACTTGATGCAAATTATGATAAAGATGTGTCATGTATTATATAAAGTTTAATTCCAAAATGGCTGAATGCCTCTTTATATTTCTTTTGACTCAAATCTTTCAGTGTGCAATAAAGTATTAATACGATTGTGTCTTCGTATTAATTAACAGCAGGAAAAAGGATCCGGAGATGAGAACAATAGTGATATCTTCCGCACCACAATTTGGGAACGAAGATAAAATGCCACCGAAAGACGGGTTTACCTGGAGAAAATACGGCAAGAAAGAGATCCTTGGCTTCAAATACCCAAGGTATGTACCGGTCAATTAA
Protein sequence

>MS.gene72208.t1

MIPIIIQIRKWLMQPKVWRFVGFGSAVVGLILQYSRSLKFKAHTAFLVLTITSVYSFFFDKVVNGKPDSYSLISCVAFAIMSLSLSRQTECGFEVDLLYFFLGCLIVQLMKIKLQLFFLGAGFSYSLIILRSSFSTVDSVGDNQYLNLQDGNSVVLHMDSLQLASTNIATTSDSRNSIDSQQLVISTDIGSMIEKLGTYVKALQHQNSNLIQMLVEHVKKYVEEHSQLVVTDSNFMMDALKPETIKGLEETAKVMLSDGFEKEFSDVYNNCRRDCLNECLELRLFGLQKLNIEDIHSMPWKDLDNHIEKWIKAFNVAVKILFPGERRLCDRIFFGYSHAADFSFMEICKGSVIQLLNFADFVAKGSLSPERLFKMLEVFETLCDLIPEFESLFCDQYGVSLRNEAVTIWKRLGQTIRGIFMELEDLIDYSPLYGVMQRIMDTLESNFNASSKFYDGPSLGYIFLMNNDTYIVHMTKDNELGTLLGNDWIRKHALKVWHYDGQYKKTMGTIGSESVQDFFRSKTGRERGMKVNVGGSKESKGYEGDMQEIEASPSQRRESRKKDPEMRTIVISSAPQFGNEDKMPPKDGFTWRKYGKKEILGFKYPRYVPVN