AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene72237

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72237.t1 MTR_6g087070 99.405 336 2 0 45 380 89 424 0.0 699
MS.gene72237.t1 MTR_8g102930 79.290 338 66 4 45 380 89 424 0.0 548
MS.gene72237.t1 MTR_3g110180 63.009 319 106 5 45 354 89 404 6.05e-133 387
MS.gene72237.t1 MTR_4g126010 72.358 246 67 1 44 289 88 332 4.59e-132 386
MS.gene72237.t1 MTR_1g042280 76.293 232 52 2 45 273 58 289 2.28e-131 379
MS.gene72237.t1 MTR_3g110180 63.009 319 105 6 45 354 89 403 2.59e-131 383
MS.gene72237.t1 MTR_1g042280 75.966 233 53 2 44 273 89 321 3.70e-131 384
MS.gene72237.t1 MTR_2g099670 80.660 212 41 0 44 255 36 247 1.63e-130 381
MS.gene72237.t1 MTR_2g099670 80.660 212 41 0 44 255 88 299 5.38e-130 381
MS.gene72237.t1 MTR_1g075870 75.107 233 55 2 45 274 33 265 3.31e-129 372
MS.gene72237.t1 MTR_1g075870 75.107 233 55 2 45 274 90 322 3.37e-129 374
MS.gene72237.t1 MTR_1g069720 78.281 221 48 0 44 264 88 308 5.70e-129 378
MS.gene72237.t1 MTR_1g075870 74.786 234 56 2 44 274 89 322 1.20e-128 377
MS.gene72237.t1 MTR_1g004990 73.640 239 62 1 45 283 89 326 1.83e-128 375
MS.gene72237.t1 MTR_7g097160 80.000 210 42 0 44 253 88 297 7.65e-127 373
MS.gene72237.t1 MTR_8g018310 72.996 237 55 2 44 272 88 323 1.83e-125 370
MS.gene72237.t1 MTR_8g018310 73.305 236 54 2 45 272 89 323 2.27e-124 365
MS.gene72237.t1 MTR_2g039930 75.829 211 51 0 45 255 8 218 3.90e-124 363
MS.gene72237.t1 MTR_2g039930 75.829 211 51 0 45 255 89 299 9.16e-123 363
MS.gene72237.t1 MTR_0492s0030 68.444 225 68 2 45 266 89 313 1.88e-108 323
MS.gene72237.t1 MTR_0543s0020 68.444 225 68 2 45 266 89 313 1.88e-108 323
MS.gene72237.t1 MTR_7g097160 80.392 153 30 0 101 253 26 178 5.60e-90 275
MS.gene72237.t1 MTR_7g006030 36.269 193 117 3 45 234 128 317 2.94e-37 142
MS.gene72237.t1 MTR_3g110240 37.436 195 105 4 38 229 210 390 1.30e-36 141
MS.gene72237.t1 MTR_7g085540 36.979 192 115 3 45 233 237 425 1.48e-36 141
MS.gene72237.t1 MTR_1g116210 36.269 193 117 3 45 234 205 394 3.28e-36 140
MS.gene72237.t1 MTR_1g007150 37.853 177 104 3 56 229 220 393 2.03e-34 134
MS.gene72237.t1 MTR_8g014050 34.450 209 119 5 25 229 210 404 9.01e-34 133
MS.gene72237.t1 MTR_7g116400 55.556 54 23 1 47 99 12 65 5.35e-13 64.7
MS.gene72237.t1 MTR_4g132860 29.412 170 103 4 56 225 178 330 2.29e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72237.t1 AT4G28880 68.657 335 87 6 45 372 89 412 1.59e-164 467
MS.gene72237.t1 AT4G28880 68.657 335 87 6 45 372 89 412 1.59e-164 467
MS.gene72237.t1 AT4G28880 68.657 335 87 6 45 372 89 412 1.59e-164 467
MS.gene72237.t1 AT4G28880 68.657 335 87 6 45 372 89 412 1.59e-164 467
MS.gene72237.t1 AT4G28860 68.862 334 87 7 45 372 89 411 6.96e-161 458
MS.gene72237.t1 AT4G28860 78.182 275 53 3 45 314 89 361 8.80e-160 454
MS.gene72237.t1 AT4G26100 72.269 238 65 1 44 281 88 324 2.41e-128 376
MS.gene72237.t1 AT3G23340 76.682 223 43 1 41 254 62 284 3.24e-128 375
MS.gene72237.t1 AT3G23340 76.682 223 43 1 41 254 76 298 4.25e-128 375
MS.gene72237.t1 AT4G28540 77.273 220 49 1 44 262 92 311 5.46e-128 377
MS.gene72237.t1 AT5G57015 64.029 278 94 3 45 319 89 363 1.93e-127 374
MS.gene72237.t1 AT2G19470 68.924 251 68 3 44 285 88 337 3.96e-127 373
MS.gene72237.t1 AT1G03930 78.095 210 46 0 44 253 88 297 3.03e-126 372
MS.gene72237.t1 AT5G44100 78.947 209 44 0 45 253 89 297 3.91e-126 372
MS.gene72237.t1 AT5G44100 78.947 209 44 0 45 253 89 297 3.91e-126 372
MS.gene72237.t1 AT1G72710 69.380 258 76 3 44 301 88 342 4.45e-126 371
MS.gene72237.t1 AT5G43320 78.571 210 45 0 44 253 88 297 4.49e-123 364
MS.gene72237.t1 AT4G14340 77.990 209 46 0 45 253 95 303 2.61e-122 361
MS.gene72237.t1 AT4G14340 77.990 209 46 0 45 253 95 303 1.01e-121 356
MS.gene72237.t1 AT5G43320 78.947 209 44 0 45 253 89 297 1.63e-121 356
MS.gene72237.t1 AT5G43320 78.947 209 44 0 45 253 89 297 1.63e-121 356
MS.gene72237.t1 AT1G04440 65.900 261 70 3 42 283 77 337 1.91e-121 359
MS.gene72237.t1 AT4G08800 72.449 196 48 1 55 250 73 262 9.77e-106 313
MS.gene72237.t1 AT2G25760 38.830 188 112 2 45 229 199 386 1.21e-38 147
MS.gene72237.t1 AT3G03940 38.542 192 112 3 45 233 230 418 5.80e-38 145
MS.gene72237.t1 AT3G13670 36.269 193 117 3 45 234 228 417 3.44e-37 142
MS.gene72237.t1 AT5G18190 38.021 192 113 3 45 233 220 408 1.06e-36 141
MS.gene72237.t1 AT5G18190 38.021 192 113 3 45 233 220 408 1.06e-36 141
MS.gene72237.t1 AT2G25760 38.298 188 110 3 45 229 199 383 1.56e-36 140

Find 95 sgRNAs with CRISPR-Local

Find 324 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGGTATATGTAATTGATTT+TGG 0.199306 6.3:+81593763 MS.gene72237:intron
ATTCCTGAGGCGCCTATTTC+GGG 0.211107 6.3:+81594608 MS.gene72237:CDS
TGCTCCCTTGCCCATGTCTA+TGG 0.233929 6.3:-81595810 None:intergenic
GATTCCTGAGGCGCCTATTT+CGG 0.240455 6.3:+81594607 MS.gene72237:CDS
TTTGATCAGCGACCTGATTA+TGG 0.244829 6.3:+81594585 MS.gene72237:CDS
GAGCAAATAACTCCCGAAAT+AGG 0.299908 6.3:-81594620 None:intergenic
TCATTCCAGTCTTTCGTGTT+TGG 0.305823 6.3:-81590892 None:intergenic
GCTTCTTTGTCGCAGCCTTT+AGG 0.310608 6.3:-81594360 None:intergenic
AGAATGCACATACTCTATTC+TGG 0.314521 6.3:-81593549 None:intergenic
ACAAAGCCGCCGGGATGATT+TGG 0.319893 6.3:+81594176 MS.gene72237:CDS
TCAGACAATGCCACTTCTTC+TGG 0.327429 6.3:+81595464 MS.gene72237:CDS
AATTTGATTATGTATTTGAT+TGG 0.332820 6.3:+81595135 MS.gene72237:CDS
TTGGGCTTGCAAAACGATAT+CGG 0.336257 6.3:+81593782 MS.gene72237:CDS
TACCGCCTGATGATTTAAAC+TGG 0.353819 6.3:-81595496 None:intergenic
TCAAAAGAGTGTGAAGTAGA+AGG 0.355419 6.3:-81595736 None:intergenic
ATGATTTGCACTTCTGTAAG+AGG 0.364364 6.3:-81590835 None:intergenic
AAGTTCCAGTTTAAATCATC+AGG 0.379006 6.3:+81595491 MS.gene72237:CDS
CCGGGATGATTTGGAGTCAC+TGG 0.379064 6.3:+81594185 MS.gene72237:CDS
GCAAGCTGCAATACTCATCT+TGG 0.385425 6.3:+81594062 MS.gene72237:CDS
GCACTTCTGTAAGAGGTTGT+AGG 0.386330 6.3:-81590828 None:intergenic
GTGCAGATGCTTACCTCAAT+AGG 0.408274 6.3:-81594421 None:intergenic
GCCCGATTGTTGCTCGCTAC+AGG 0.409927 6.3:-81595296 None:intergenic
TAGAAAGTTCAAAACCTGTA+TGG 0.413631 6.3:-81593829 None:intergenic
TTCCTGTAGCGAGCAACAAT+CGG 0.414919 6.3:+81595294 MS.gene72237:CDS
GGGCAAGGGAGCAGTAAAAT+TGG 0.426700 6.3:+81595820 MS.gene72237:CDS
TGGTTTGCAGCTTCAGTGGA+TGG 0.432880 6.3:-81595790 None:intergenic
TGGGCTTGCAAAACGATATC+GGG 0.435539 6.3:+81593783 MS.gene72237:CDS
TGGGATGTGGCGATTGGTTG+TGG 0.437079 6.3:-81593809 None:intergenic
CGCCTCAGGAATCCATAATC+AGG 0.444637 6.3:-81594597 None:intergenic
ATAGAGTATGTGCATTCTAA+AGG 0.458276 6.3:+81593554 MS.gene72237:CDS
CTTGATGTTGGCTGATCAAA+TGG 0.461622 6.3:+81593350 MS.gene72237:CDS
ACATTCATCCGACTACTTGA+AGG 0.474841 6.3:-81595844 None:intergenic
AGTGGATGGGGAAGGCTTCA+AGG 0.475334 6.3:-81595776 None:intergenic
CCTCCATAGGGATATAAAAC+CGG 0.477649 6.3:+81593580 MS.gene72237:CDS
TTGGCTTCTGAGAATCCTCT+TGG 0.479686 6.3:+81595524 MS.gene72237:CDS
ATTCTAAAGGGTTCCTCCAT+AGG 0.479961 6.3:+81593567 MS.gene72237:CDS
TGCAATACTCATCTTGGGAT+TGG 0.480350 6.3:+81594068 MS.gene72237:CDS
CAAGCTGCAATACTCATCTT+GGG 0.484146 6.3:+81594063 MS.gene72237:CDS
TATTTGTGTTTAGCCTTCCA+TGG 0.489876 6.3:+81594332 MS.gene72237:intron
TCAAGAAGCACCAACCTTGT+TGG 0.492609 6.3:-81595340 None:intergenic
ACTCCCGAAATAGGCGCCTC+AGG 0.494724 6.3:-81594611 None:intergenic
TTGTTGGTTATCAATATCCA+TGG 0.497091 6.3:-81595324 None:intergenic
AGGTCAAAGAATGGCAGTAA+TGG 0.499416 6.3:-81594563 None:intergenic
TCCTGTAGCGAGCAACAATC+GGG 0.501671 6.3:+81595295 MS.gene72237:CDS
CCTTCCATGGCAAAACCTAA+AGG 0.502138 6.3:+81594345 MS.gene72237:CDS
TTGTTGCTCGCTACAGGAAC+CGG 0.502364 6.3:-81595290 None:intergenic
TAGAGTATGTGCATTCTAAA+GGG 0.503360 6.3:+81593555 MS.gene72237:CDS
GGTTTGCAGCTTCAGTGGAT+GGG 0.506805 6.3:-81595789 None:intergenic
ACTTGGTCGGAAGGCAAACC+TGG 0.509382 6.3:+81593619 MS.gene72237:CDS
AAGTATGAAGCAAACTCTAC+AGG 0.511994 6.3:-81594540 None:intergenic
CCTCAAAACTGTCTTGATGT+TGG 0.516363 6.3:+81593338 MS.gene72237:CDS
GCAGCTTCAGTGGATGGGGA+AGG 0.516750 6.3:-81595784 None:intergenic
GAAAGTATCAACTCCTATTG+AGG 0.519371 6.3:+81594408 MS.gene72237:CDS
TTCTAAAGGGTTCCTCCATA+GGG 0.522924 6.3:+81593568 MS.gene72237:CDS
AGAAAGTTCAAAACCTGTAT+GGG 0.527700 6.3:-81593828 None:intergenic
TTAAGCCAAACACGAAAGAC+TGG 0.529424 6.3:+81590887 MS.gene72237:CDS
CGGGAGTTATTTGCTCGAGA+AGG 0.530876 6.3:+81594627 MS.gene72237:CDS
CAAAAGAGTGTGAAGTAGAA+GGG 0.533732 6.3:-81595735 None:intergenic
CCAATCGCCACATCCCATAC+AGG 0.535975 6.3:+81593815 MS.gene72237:CDS
ACTGGAATGAGAATTTCAAC+TGG 0.537033 6.3:+81590905 MS.gene72237:CDS
GATAACTTTCTCATGGGACT+TGG 0.540360 6.3:+81593602 MS.gene72237:CDS
CGGGATGATTTGGAGTCACT+GGG 0.546228 6.3:+81594186 MS.gene72237:CDS
GTTTGCAGCTTCAGTGGATG+GGG 0.548559 6.3:-81595788 None:intergenic
CTAAGGAAGTGATTAATGGA+AGG 0.549883 6.3:+81590781 None:intergenic
TTCAAAACCTGTATGGGATG+TGG 0.553955 6.3:-81593822 None:intergenic
CAACAATCGGGCAATGCCCA+TGG 0.556507 6.3:+81595307 MS.gene72237:CDS
AAACCGGATAACTTTCTCAT+GGG 0.561522 6.3:+81593596 MS.gene72237:CDS
TCTCATGGGACTTGGTCGGA+AGG 0.565028 6.3:+81593610 MS.gene72237:CDS
TCTATGGTTTGCAGCTTCAG+TGG 0.569299 6.3:-81595794 None:intergenic
ATAATCAGGTCGCTGATCAA+AGG 0.572957 6.3:-81594583 None:intergenic
AAAACCGGATAACTTTCTCA+TGG 0.575825 6.3:+81593595 MS.gene72237:CDS
TAAGGAAGTGATTAATGGAA+GGG 0.576446 6.3:+81590782 None:intergenic
CGACTTACATTCTTGCCAAG+AGG 0.576982 6.3:-81595539 None:intergenic
AGTCCCATGAGAAAGTTATC+CGG 0.577140 6.3:-81593599 None:intergenic
GAACTTAACACCAGAAGAAG+TGG 0.579002 6.3:-81595474 None:intergenic
TTTGTTGGGGCCTAGTCTCG+AGG 0.587835 6.3:+81593284 MS.gene72237:intron
GCTGATCAAAGGTCAAAGAA+TGG 0.590024 6.3:-81594572 None:intergenic
ACTTTCTCATGGGACTTGGT+CGG 0.592057 6.3:+81593606 MS.gene72237:CDS
ATTTGCAGAACAAAGCCGCC+GGG 0.602207 6.3:+81594167 MS.gene72237:intron
CCTGTATGGGATGTGGCGAT+TGG 0.602796 6.3:-81593815 None:intergenic
TGTTGGTTATCAATATCCAT+GGG 0.604040 6.3:-81595323 None:intergenic
AAATTGGTCCTTCAAGTAGT+CGG 0.607497 6.3:+81595836 MS.gene72237:CDS
TACAGAAGTGCAAATCATGT+GGG 0.607633 6.3:+81590840 MS.gene72237:CDS
GCAAACCATAGACATGGGCA+AGG 0.612790 6.3:+81595805 MS.gene72237:CDS
TTACAGAAGTGCAAATCATG+TGG 0.616500 6.3:+81590839 MS.gene72237:CDS
GAAGCTGCAAACCATAGACA+TGG 0.621666 6.3:+81595799 MS.gene72237:CDS
TTCCAGTTTAAATCATCAGG+CGG 0.630569 6.3:+81595494 MS.gene72237:CDS
CCAGTGACTCCAAATCATCC+CGG 0.634258 6.3:-81594185 None:intergenic
TATTTGCAGAACAAAGCCGC+CGG 0.641718 6.3:+81594166 MS.gene72237:intron
AAGCTGCAAACCATAGACAT+GGG 0.682595 6.3:+81595800 MS.gene72237:CDS
CAAACCATAGACATGGGCAA+GGG 0.684149 6.3:+81595806 MS.gene72237:CDS
GACCTGATTATGGATTCCTG+AGG 0.685615 6.3:+81594595 MS.gene72237:CDS
GAATGCCATACCTTCCTCTG+AGG 0.704652 6.3:-81594227 None:intergenic
ATGGATATTGATAACCAACA+AGG 0.718739 6.3:+81595326 MS.gene72237:CDS
GTGACTCCAAATCATCCCGG+CGG 0.728033 6.3:-81594182 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAGAAGAAA+TGG - chr6.3:81591940-81591959 None:intergenic 10.0%
!! AAATTATTTAACTATGTTAT+TGG + chr6.3:81592260-81592279 MS.gene72237:intron 10.0%
!!! AATTCATTAAGTATTAATTT+TGG - chr6.3:81593997-81594016 None:intergenic 10.0%
!!! ATTCATTAAGTATTAATTTT+GGG - chr6.3:81593996-81594015 None:intergenic 10.0%
!!! GACATATTTTATATAATTAA+AGG + chr6.3:81590991-81591010 MS.gene72237:intron 10.0%
!!! TTATTATTTTTGTAGATTTT+TGG + chr6.3:81595700-81595719 MS.gene72237:intron 10.0%
!! AATTTGATTATGTATTTGAT+TGG + chr6.3:81595135-81595154 MS.gene72237:CDS 15.0%
!! ATAAAAAAACTGATGTTAAA+TGG + chr6.3:81594968-81594987 MS.gene72237:intron 15.0%
!! ATAAACAACAGATTAAAATT+TGG - chr6.3:81595684-81595703 None:intergenic 15.0%
!! ATTCAATTGTTCTTATAAAT+CGG + chr6.3:81591485-81591504 MS.gene72237:intron 15.0%
!! GTAAAGTTAATATATTTACT+AGG + chr6.3:81591288-81591307 MS.gene72237:intron 15.0%
!! TAAAAAAACTGATGTTAAAT+GGG + chr6.3:81594969-81594988 MS.gene72237:intron 15.0%
!! TATATATGAGTTTACTTTAA+AGG - chr6.3:81591128-81591147 None:intergenic 15.0%
!! TTAAATGAATTAAAAGTTGA+AGG + chr6.3:81591243-81591262 MS.gene72237:intron 15.0%
!!! ATTTTTTATGAATGAAGTTT+AGG - chr6.3:81594929-81594948 None:intergenic 15.0%
!!! GATTTTTGTTTAATTAATAC+AGG + chr6.3:81593201-81593220 MS.gene72237:intron 15.0%
!!! GTATTAACATGTTTTTATTT+GGG + chr6.3:81593517-81593536 MS.gene72237:intron 15.0%
!! ACAACAATGAAAATAATGAA+AGG - chr6.3:81592711-81592730 None:intergenic 20.0%
!! TAAAGTGAATGAATTAACAA+TGG - chr6.3:81593865-81593884 None:intergenic 20.0%
!! TAAGGAAACAATTAAAAACT+GGG - chr6.3:81593655-81593674 None:intergenic 20.0%
!! TAATTCATTCACTTTATCTT+CGG + chr6.3:81593869-81593888 MS.gene72237:intron 20.0%
!! TTAACATTGTGTTAATTACA+TGG - chr6.3:81591330-81591349 None:intergenic 20.0%
!! TTCATTATTACTAATTGACA+AGG + chr6.3:81595399-81595418 MS.gene72237:intron 20.0%
!!! AAATTTGTTGAAAGTATGTT+TGG - chr6.3:81592228-81592247 None:intergenic 20.0%
!!! AATAAATATTTTCAGATGCA+TGG - chr6.3:81595256-81595275 None:intergenic 20.0%
!!! AGGTATATGTAATTGATTTT+GGG + chr6.3:81593764-81593783 MS.gene72237:intron 20.0%
!!! ATAAATATTTTCAGATGCAT+GGG - chr6.3:81595255-81595274 None:intergenic 20.0%
!!! CCCTAAAAATACAATTTTTA+GGG + chr6.3:81592817-81592836 MS.gene72237:intron 20.0%
!!! CCCTAAAAATTGTATTTTTA+GGG - chr6.3:81592820-81592839 None:intergenic 20.0%
!!! GGTATTAACATGTTTTTATT+TGG + chr6.3:81593516-81593535 MS.gene72237:intron 20.0%
!!! TAGTGTATGTTTTTTTATCA+CGG + chr6.3:81592002-81592021 MS.gene72237:intron 20.0%
!!! TCCCTAAAAATACAATTTTT+AGG + chr6.3:81592816-81592835 MS.gene72237:intron 20.0%
!!! TCCCTAAAAATTGTATTTTT+AGG - chr6.3:81592821-81592840 None:intergenic 20.0%
!!! TTAATTTTGGGTATTTCTAA+CGG - chr6.3:81593984-81594003 None:intergenic 20.0%
!!! TTCATTATTTTCATTGTTGT+GGG + chr6.3:81592711-81592730 MS.gene72237:intron 20.0%
!!! TTTCATTATTTTCATTGTTG+TGG + chr6.3:81592710-81592729 MS.gene72237:intron 20.0%
!!! TTTTGTTTAATTAATACAGG+TGG + chr6.3:81593204-81593223 MS.gene72237:intron 20.0%
! AAAACGTGGACTTATTTATA+GGG - chr6.3:81591034-81591053 None:intergenic 25.0%
! AAACTTTCTTTAAGCATGTT+TGG - chr6.3:81592090-81592109 None:intergenic 25.0%
! AAGAGAATTTGATTGATTGA+AGG - chr6.3:81591797-81591816 None:intergenic 25.0%
! AAGCTCTATAATATTCTTCA+AGG + chr6.3:81592662-81592681 MS.gene72237:intron 25.0%
! AATGATTCTGACAAATCATT+CGG - chr6.3:81592484-81592503 None:intergenic 25.0%
! ATAAACCATACAAATCACTA+TGG - chr6.3:81592512-81592531 None:intergenic 25.0%
! ATCAGTCAATTCTAAATGTA+AGG - chr6.3:81593673-81593692 None:intergenic 25.0%
! CGTTGAATAATTTATGTATG+TGG - chr6.3:81591456-81591475 None:intergenic 25.0%
! GTAAGGAAACAATTAAAAAC+TGG - chr6.3:81593656-81593675 None:intergenic 25.0%
! TCATTTCTCTTGGATTAAAT+AGG + chr6.3:81592909-81592928 MS.gene72237:intron 25.0%
! TGGGATTTAATTGAAAATGT+TGG + chr6.3:81593179-81593198 MS.gene72237:intron 25.0%
! TTGAAGAATATTATAGAGCT+TGG - chr6.3:81592663-81592682 None:intergenic 25.0%
! TTTAACTAATCATGAGTGAA+CGG + chr6.3:81591208-81591227 MS.gene72237:intron 25.0%
!! AAGAATATGAATTTTGCGTA+TGG - chr6.3:81595025-81595044 None:intergenic 25.0%
!! GCAAAATTCATATTCTTTTG+TGG + chr6.3:81595028-81595047 MS.gene72237:intron 25.0%
!! TATGAGTTTACTTTAAAGGA+TGG - chr6.3:81591124-81591143 None:intergenic 25.0%
!! TTAATGAATTTTACCTCACA+GGG + chr6.3:81594007-81594026 MS.gene72237:intron 25.0%
!! TTATTGTAAATAGTACCGAA+TGG - chr6.3:81591369-81591388 None:intergenic 25.0%
!! TTGCTATTGTTATTGTTGTT+GGG + chr6.3:81593160-81593179 MS.gene72237:intron 25.0%
!! TTTTATGAATGAAGTTTAGG+TGG - chr6.3:81594926-81594945 None:intergenic 25.0%
!!! ACTTTTAAGAAACTAAAAGC+TGG - chr6.3:81591081-81591100 None:intergenic 25.0%
!!! CAGGTATATGTAATTGATTT+TGG + chr6.3:81593763-81593782 MS.gene72237:intron 25.0%
!!! CTTTTAAGAAACTAAAAGCT+GGG - chr6.3:81591080-81591099 None:intergenic 25.0%
!!! TCCTCTAAAATGTCAAATAT+CGG - chr6.3:81592874-81592893 None:intergenic 25.0%
AAGTTCCAGTTTAAATCATC+AGG + chr6.3:81595491-81595510 MS.gene72237:CDS 30.0%
AATGAAATGAATTCAACACG+CGG - chr6.3:81591591-81591610 None:intergenic 30.0%
AATGTTGTCAATTGCAGATT+GGG - chr6.3:81593089-81593108 None:intergenic 30.0%
ACAAGGATTAATGCTTATAC+AGG + chr6.3:81595416-81595435 MS.gene72237:intron 30.0%
AGAAAGTTCAAAACCTGTAT+GGG - chr6.3:81593831-81593850 None:intergenic 30.0%
AGAAATGAAATGTGTCAGTT+TGG + chr6.3:81592773-81592792 MS.gene72237:intron 30.0%
ATAGAGTATGTGCATTCTAA+AGG + chr6.3:81593554-81593573 MS.gene72237:CDS 30.0%
ATCAAACCCAGTAAAAAAAG+AGG - chr6.3:81593895-81593914 None:intergenic 30.0%
ATTGTTCTTATAAATCGGAC+CGG + chr6.3:81591490-81591509 MS.gene72237:intron 30.0%
ATTTGTAACCTGTCATAAAC+CGG - chr6.3:81595118-81595137 None:intergenic 30.0%
ATTTGTGTGTGTGTAGATTT+GGG + chr6.3:81595220-81595239 MS.gene72237:intron 30.0%
CAAAACGTGGACTTATTTAT+AGG - chr6.3:81591035-81591054 None:intergenic 30.0%
CAAGGATTAATGCTTATACA+GGG + chr6.3:81595417-81595436 MS.gene72237:intron 30.0%
CACACACACAAATATACTTA+CGG - chr6.3:81595213-81595232 None:intergenic 30.0%
CATGACAAGATATATAACAG+TGG - chr6.3:81593457-81593476 None:intergenic 30.0%
CTCTATAATATTCTTCAAGG+AGG + chr6.3:81592665-81592684 MS.gene72237:intron 30.0%
CTGTTATATATCTTGTCATG+TGG + chr6.3:81593457-81593476 MS.gene72237:intron 30.0%
GGCATTCTTATCTAGTTATT+TGG + chr6.3:81594243-81594262 MS.gene72237:intron 30.0%
TACCAAACATGACAATAACA+TGG - chr6.3:81592137-81592156 None:intergenic 30.0%
TACGAAAGAAGGAACTAAAA+GGG - chr6.3:81593386-81593405 None:intergenic 30.0%
TAGAAAGTTCAAAACCTGTA+TGG - chr6.3:81593832-81593851 None:intergenic 30.0%
TAGAGTATGTGCATTCTAAA+GGG + chr6.3:81593555-81593574 MS.gene72237:CDS 30.0%
TATTGTCATGTTTGGTATCA+TGG + chr6.3:81592140-81592159 MS.gene72237:intron 30.0%
TATTTGTGTGTGTGTAGATT+TGG + chr6.3:81595219-81595238 MS.gene72237:intron 30.0%
TTAACTAATCATGAGTGAAC+GGG + chr6.3:81591209-81591228 MS.gene72237:intron 30.0%
TTATGCAGCACAACAAAATA+TGG - chr6.3:81595367-81595386 None:intergenic 30.0%
! AATATGAATTTTGCGTATGG+AGG - chr6.3:81595022-81595041 None:intergenic 30.0%
! ATAGTTTTCCTTTTCCATTG+CGG + chr6.3:81591612-81591631 MS.gene72237:intron 30.0%
! ATATTGATAACCAACAAGGT+TGG + chr6.3:81595330-81595349 MS.gene72237:intron 30.0%
! ATCGGTGATAAATTCAAGTT+AGG + chr6.3:81591723-81591742 MS.gene72237:intron 30.0%
! ATGGATATTGATAACCAACA+AGG + chr6.3:81595326-81595345 MS.gene72237:CDS 30.0%
! CTTAATGAATTTTACCTCAC+AGG + chr6.3:81594006-81594025 MS.gene72237:intron 30.0%
! GCTAAAACTAAAAGTGTGTT+TGG - chr6.3:81592562-81592581 None:intergenic 30.0%
! TCCGATATTTGACATTTTAG+AGG + chr6.3:81592870-81592889 MS.gene72237:intron 30.0%
! TCGACATTTTTCATTTCTCT+TGG + chr6.3:81592899-81592918 MS.gene72237:intron 30.0%
! TGTATGGTTTATCGTGATTT+TGG + chr6.3:81592520-81592539 MS.gene72237:intron 30.0%
! TGTTGGTTATCAATATCCAT+GGG - chr6.3:81595326-81595345 None:intergenic 30.0%
! TTCACAAGTTTGAAACACAA+AGG - chr6.3:81595642-81595661 None:intergenic 30.0%
! TTGTTGGTTATCAATATCCA+TGG - chr6.3:81595327-81595346 None:intergenic 30.0%
! TTTTAAATACACCGCTCTTA+CGG + chr6.3:81590956-81590975 MS.gene72237:intron 30.0%
!! CTTGCTATTGTTATTGTTGT+TGG + chr6.3:81593159-81593178 MS.gene72237:intron 30.0%
!! TTATTTTGTCATATTGCAGC+CGG + chr6.3:81595271-81595290 MS.gene72237:intron 30.0%
!!! AAAGCTGGGAATTTTTTTAG+AGG - chr6.3:81591066-81591085 None:intergenic 30.0%
!!! AAATGCTTTTTCAGTTGGTA+TGG + chr6.3:81594750-81594769 MS.gene72237:intron 30.0%
!!! AAGCTGGGAATTTTTTTAGA+GGG - chr6.3:81591065-81591084 None:intergenic 30.0%
!!! ATTTGTCTGTTGTTTTGTGT+AGG + chr6.3:81594500-81594519 MS.gene72237:intron 30.0%
!!! GGATATTTTTGTTTCTGTCA+AGG + chr6.3:81592838-81592857 MS.gene72237:intron 30.0%
AAAACCGGATAACTTTCTCA+TGG + chr6.3:81593595-81593614 MS.gene72237:CDS 35.0%
AAACCGGATAACTTTCTCAT+GGG + chr6.3:81593596-81593615 MS.gene72237:CDS 35.0%
AAAGAAGGAACTAAAAGGGA+TGG - chr6.3:81593382-81593401 None:intergenic 35.0%
AAAGTGTGTTTGGTATCACA+AGG - chr6.3:81592552-81592571 None:intergenic 35.0%
AAATTGGTCCTTCAAGTAGT+CGG + chr6.3:81595836-81595855 MS.gene72237:CDS 35.0%
AAGAAGGAACTAAAAGGGAT+GGG - chr6.3:81593381-81593400 None:intergenic 35.0%
AAGTATGAAGCAAACTCTAC+AGG - chr6.3:81594543-81594562 None:intergenic 35.0%
ACTGGAATGAGAATTTCAAC+TGG + chr6.3:81590905-81590924 MS.gene72237:CDS 35.0%
AGAATGCACATACTCTATTC+TGG - chr6.3:81593552-81593571 None:intergenic 35.0%
AGAATGTAAGTCGTCTTACA+TGG + chr6.3:81595549-81595568 MS.gene72237:intron 35.0%
AGAGGGATTAAAACAAAACG+TGG - chr6.3:81591048-81591067 None:intergenic 35.0%
AGATTCATGGATCGAATCAT+CGG + chr6.3:81591705-81591724 MS.gene72237:intron 35.0%
AGCCATGTTATTGTCATGTT+TGG + chr6.3:81592132-81592151 MS.gene72237:intron 35.0%
AGGGAGAACAAAAACTTAAC+AGG + chr6.3:81594026-81594045 MS.gene72237:intron 35.0%
AGGTGTTCATGTATTTACTC+AGG + chr6.3:81592929-81592948 MS.gene72237:intron 35.0%
ATCATCAGGCGGTAAAAATT+TGG + chr6.3:81595505-81595524 MS.gene72237:CDS 35.0%
CAATGTTGTCAATTGCAGAT+TGG - chr6.3:81593090-81593109 None:intergenic 35.0%
CGAGTAATATCTCAGATTCA+TGG + chr6.3:81591692-81591711 MS.gene72237:intron 35.0%
CTACGAAAGAAGGAACTAAA+AGG - chr6.3:81593387-81593406 None:intergenic 35.0%
GACAAAATCAATTCGACTCA+AGG - chr6.3:81592334-81592353 None:intergenic 35.0%
GCACAAATGACATATACTCT+GGG - chr6.3:81593435-81593454 None:intergenic 35.0%
GCACAACTTGAGATTAAATG+CGG + chr6.3:81592733-81592752 MS.gene72237:intron 35.0%
GGGAGAACAAAAACTTAACA+GGG + chr6.3:81594027-81594046 MS.gene72237:intron 35.0%
TAACTAATCATGAGTGAACG+GGG + chr6.3:81591210-81591229 MS.gene72237:intron 35.0%
TCGATCAAACAACTAGTTCA+AGG - chr6.3:81593705-81593724 None:intergenic 35.0%
TGACACTAAAAAACACCGTA+AGG - chr6.3:81593410-81593429 None:intergenic 35.0%
TTCCAGTTTAAATCATCAGG+CGG + chr6.3:81595494-81595513 MS.gene72237:CDS 35.0%
TTGGCTTCATAAAGCAATTG+TGG - chr6.3:81592644-81592663 None:intergenic 35.0%
! AGAGAAGTGTGCATTTGTAA+AGG + chr6.3:81593495-81593514 MS.gene72237:intron 35.0%
! ATGATTTGCACTTCTGTAAG+AGG - chr6.3:81590838-81590857 None:intergenic 35.0%
! CAAAAGAGTGTGAAGTAGAA+GGG - chr6.3:81595738-81595757 None:intergenic 35.0%
! GTGAACCATAGTGATTTGTA+TGG + chr6.3:81592504-81592523 MS.gene72237:intron 35.0%
! TACAGAAGTGCAAATCATGT+GGG + chr6.3:81590840-81590859 MS.gene72237:CDS 35.0%
! TATTTGTGTTTAGCCTTCCA+TGG + chr6.3:81594332-81594351 MS.gene72237:intron 35.0%
! TCAAAAGAGTGTGAAGTAGA+AGG - chr6.3:81595739-81595758 None:intergenic 35.0%
! TGCAATTTGTTTGACGTGAA+GGG - chr6.3:81594117-81594136 None:intergenic 35.0%
! TGTGATTTACGCTTTGAACA+AGG - chr6.3:81594723-81594742 None:intergenic 35.0%
! TTACAGAAGTGCAAATCATG+TGG + chr6.3:81590839-81590858 MS.gene72237:CDS 35.0%
!! CAACATCAAGACAGTTTTGA+GGG - chr6.3:81593340-81593359 None:intergenic 35.0%
!! CCAACTGAAAAAGCATTTGT+TGG - chr6.3:81594748-81594767 None:intergenic 35.0%
!! GAAAGTATCAACTCCTATTG+AGG + chr6.3:81594408-81594427 MS.gene72237:CDS 35.0%
!! GAGGATCTTTTTGTTTACTG+TGG + chr6.3:81593303-81593322 MS.gene72237:CDS 35.0%
!! GTGCTTGTTATGGATTTGTT+GGG + chr6.3:81593270-81593289 MS.gene72237:intron 35.0%
!! TATCCGGTTTTATATCCCTA+TGG - chr6.3:81593586-81593605 None:intergenic 35.0%
!! TGCTTGTTATGGATTTGTTG+GGG + chr6.3:81593271-81593290 MS.gene72237:intron 35.0%
!! TGTGCTTGTTATGGATTTGT+TGG + chr6.3:81593269-81593288 MS.gene72237:intron 35.0%
!! TTGTTTTTCTGTTGTGTTGC+AGG + chr6.3:81592598-81592617 MS.gene72237:intron 35.0%
!!! ACTCTTTTGAAGCATCAAGA+AGG + chr6.3:81595749-81595768 MS.gene72237:CDS 35.0%
!!! CCAACAAATGCTTTTTCAGT+TGG + chr6.3:81594745-81594764 MS.gene72237:intron 35.0%
AAATGAATTCAACACGCGGA+CGG - chr6.3:81591587-81591606 None:intergenic 40.0%
AAGCATGTTTGGTATCACCA+TGG - chr6.3:81592079-81592098 None:intergenic 40.0%
AAGCTGCAAACCATAGACAT+GGG + chr6.3:81595800-81595819 MS.gene72237:CDS 40.0%
AAGTATGTTTGGTATCCCAG+TGG - chr6.3:81592217-81592236 None:intergenic 40.0%
ACAAAAAGATCCTCGAGACT+AGG - chr6.3:81593297-81593316 None:intergenic 40.0%
ACATTCATCCGACTACTTGA+AGG - chr6.3:81595847-81595866 None:intergenic 40.0%
ACCAGAATCACAGTATCTTG+AGG - chr6.3:81592052-81592071 None:intergenic 40.0%
ACCATGAGATACTGTGATTC+TGG + chr6.3:81592186-81592205 MS.gene72237:intron 40.0%
ACCTCAAGATACTGTGATTC+TGG + chr6.3:81592048-81592067 MS.gene72237:intron 40.0%
ACTCATTTCCGGTTTATGAC+AGG + chr6.3:81595107-81595126 MS.gene72237:intron 40.0%
AGAAGGAACTAAAAGGGATG+GGG - chr6.3:81593380-81593399 None:intergenic 40.0%
AGGTCAAAGAATGGCAGTAA+TGG - chr6.3:81594566-81594585 None:intergenic 40.0%
AGTCCCATGAGAAAGTTATC+CGG - chr6.3:81593602-81593621 None:intergenic 40.0%
ATAAGATGGAGTGGTGTAGA+CGG + chr6.3:81593237-81593256 MS.gene72237:intron 40.0%
ATAATCAGGTCGCTGATCAA+AGG - chr6.3:81594586-81594605 None:intergenic 40.0%
CAACTAGTTCAAGGAATGAC+AGG - chr6.3:81593696-81593715 None:intergenic 40.0%
CAAGCTGCAATACTCATCTT+GGG + chr6.3:81594063-81594082 MS.gene72237:CDS 40.0%
CACTATCAGAGTCCACAAAT+CGG - chr6.3:81594824-81594843 None:intergenic 40.0%
CCTCAAAACTGTCTTGATGT+TGG + chr6.3:81593338-81593357 MS.gene72237:CDS 40.0%
CCTCCATAGGGATATAAAAC+CGG + chr6.3:81593580-81593599 MS.gene72237:CDS 40.0%
CTCATGGTTTACTGTGATTC+TGG - chr6.3:81592174-81592193 None:intergenic 40.0%
CTGTGATTCTGGTATATCCA+TGG + chr6.3:81592059-81592078 MS.gene72237:intron 40.0%
CTTGAGGTTCACTGTAATTC+TGG - chr6.3:81592036-81592055 None:intergenic 40.0%
GAACTTAACACCAGAAGAAG+TGG - chr6.3:81595477-81595496 None:intergenic 40.0%
GAGCAAATAACTCCCGAAAT+AGG - chr6.3:81594623-81594642 None:intergenic 40.0%
GATAACTTTCTCATGGGACT+TGG + chr6.3:81593602-81593621 MS.gene72237:CDS 40.0%
GATGAGAAGAGAAGAGGTAA+AGG - chr6.3:81593962-81593981 None:intergenic 40.0%
GATTTGTGGACTCTGATAGT+GGG + chr6.3:81594823-81594842 MS.gene72237:intron 40.0%
GCTGATCAAAGGTCAAAGAA+TGG - chr6.3:81594575-81594594 None:intergenic 40.0%
GGCACAAATGACATATACTC+TGG - chr6.3:81593436-81593455 None:intergenic 40.0%
GTCATAAACCGGAAATGAGT+GGG - chr6.3:81595107-81595126 None:intergenic 40.0%
TACCGCCTGATGATTTAAAC+TGG - chr6.3:81595499-81595518 None:intergenic 40.0%
TCATAAACCGGAAATGAGTG+GGG - chr6.3:81595106-81595125 None:intergenic 40.0%
TCATTCCAGTCTTTCGTGTT+TGG - chr6.3:81590895-81590914 None:intergenic 40.0%
TCCTTCGGTGAAATCTATCT+CGG + chr6.3:81591765-81591784 MS.gene72237:intron 40.0%
TGAGTGGGGATGTTACATTT+CGG - chr6.3:81595092-81595111 None:intergenic 40.0%
TGCAATACTCATCTTGGGAT+TGG + chr6.3:81594068-81594087 MS.gene72237:CDS 40.0%
TGTCATAAACCGGAAATGAG+TGG - chr6.3:81595108-81595127 None:intergenic 40.0%
TTAAGCCAAACACGAAAGAC+TGG + chr6.3:81590887-81590906 MS.gene72237:CDS 40.0%
TTCAAAACCTGTATGGGATG+TGG - chr6.3:81593825-81593844 None:intergenic 40.0%
TTCTTATAAATCGGACCGGA+GGG + chr6.3:81591494-81591513 MS.gene72237:intron 40.0%
TTGGGCTTGCAAAACGATAT+CGG + chr6.3:81593782-81593801 MS.gene72237:CDS 40.0%
TTGTCAAGTATCCGCTATAG+TGG + chr6.3:81592954-81592973 MS.gene72237:intron 40.0%
TTTAGGGACAATTGAGACGT+TGG - chr6.3:81592804-81592823 None:intergenic 40.0%
TTTGATCAGCGACCTGATTA+TGG + chr6.3:81594585-81594604 MS.gene72237:CDS 40.0%
! AAATAGTACCGAATGGCGAA+TGG - chr6.3:81591362-81591381 None:intergenic 40.0%
! AAGTTTTTGTTCTCCCTGTG+AGG - chr6.3:81594023-81594042 None:intergenic 40.0%
! ATTCTAAAGGGTTCCTCCAT+AGG + chr6.3:81593567-81593586 MS.gene72237:CDS 40.0%
! CCAACATCAAGACAGTTTTG+AGG - chr6.3:81593341-81593360 None:intergenic 40.0%
! CTGCAATTTGTTTGACGTGA+AGG - chr6.3:81594118-81594137 None:intergenic 40.0%
! CTTGATGTTGGCTGATCAAA+TGG + chr6.3:81593350-81593369 MS.gene72237:CDS 40.0%
! GGAAGACAATGTGCTTGTTA+TGG + chr6.3:81593260-81593279 MS.gene72237:intron 40.0%
! TTCAAGTTAGGACGCAAGAT+CGG + chr6.3:81591735-81591754 MS.gene72237:intron 40.0%
! TTCCTTCTTTCGTAGCCTTA+CGG + chr6.3:81593392-81593411 MS.gene72237:intron 40.0%
! TTCTAAAGGGTTCCTCCATA+GGG + chr6.3:81593568-81593587 MS.gene72237:CDS 40.0%
! TTTTGTACTTCCTCAGAGGA+AGG + chr6.3:81594217-81594236 MS.gene72237:CDS 40.0%
!!! CTTCGGCCTCTTTTTTTACT+GGG + chr6.3:81593886-81593905 MS.gene72237:intron 40.0%
!!! TCTTCGGCCTCTTTTTTTAC+TGG + chr6.3:81593885-81593904 MS.gene72237:intron 40.0%
AAACTGGGTATTCACTCACC+AGG - chr6.3:81593640-81593659 None:intergenic 45.0%
AAATGCACACTTCTCTCGCT+TGG - chr6.3:81593491-81593510 None:intergenic 45.0%
AAGATCGGAAGTGGATCCTT+CGG + chr6.3:81591750-81591769 MS.gene72237:intron 45.0%
ACACCACTCCATCTTATGCT+TGG - chr6.3:81593234-81593253 None:intergenic 45.0%
ACCGAGATAGATTTCACCGA+AGG - chr6.3:81591769-81591788 None:intergenic 45.0%
ACTCGAACATACCGTAAGAG+CGG - chr6.3:81590970-81590989 None:intergenic 45.0%
AGGCTCACTAAGCGCTATAA+AGG - chr6.3:81594862-81594881 None:intergenic 45.0%
ATAACCCATATTGAGCCTGC+GGG + chr6.3:81594893-81594912 MS.gene72237:intron 45.0%
ATCCCAAGCATAAGATGGAG+TGG + chr6.3:81593228-81593247 MS.gene72237:intron 45.0%
CAAACCATAGACATGGGCAA+GGG + chr6.3:81595806-81595825 MS.gene72237:CDS 45.0%
CACCACTCCATCTTATGCTT+GGG - chr6.3:81593233-81593252 None:intergenic 45.0%
CATAACCCATATTGAGCCTG+CGG + chr6.3:81594892-81594911 MS.gene72237:intron 45.0%
CCTTCCATGGCAAAACCTAA+AGG + chr6.3:81594345-81594364 MS.gene72237:CDS 45.0%
CGACTTACATTCTTGCCAAG+AGG - chr6.3:81595542-81595561 None:intergenic 45.0%
CGATTTGTGGACTCTGATAG+TGG + chr6.3:81594822-81594841 MS.gene72237:intron 45.0%
GAAGCTGCAAACCATAGACA+TGG + chr6.3:81595799-81595818 MS.gene72237:CDS 45.0%
GAAGGAACTAAAAGGGATGG+GGG - chr6.3:81593379-81593398 None:intergenic 45.0%
GACCTGATTATGGATTCCTG+AGG + chr6.3:81594595-81594614 MS.gene72237:CDS 45.0%
GCAAGCTGCAATACTCATCT+TGG + chr6.3:81594062-81594081 MS.gene72237:CDS 45.0%
GCACTTCTGTAAGAGGTTGT+AGG - chr6.3:81590831-81590850 None:intergenic 45.0%
GCCAGAATCACAGTATCTCA+TGG - chr6.3:81592190-81592209 None:intergenic 45.0%
GCTGCACAGATTCAGTAGAA+AGG - chr6.3:81595592-81595611 None:intergenic 45.0%
GTAACATCCCCACTCATTTC+CGG + chr6.3:81595096-81595115 MS.gene72237:intron 45.0%
GTGATTCTGGCATATCCACT+GGG + chr6.3:81592199-81592218 MS.gene72237:intron 45.0%
GTGCAGATGCTTACCTCAAT+AGG - chr6.3:81594424-81594443 None:intergenic 45.0%
GTGGTATCCCAAGCATAAGA+TGG + chr6.3:81593223-81593242 MS.gene72237:intron 45.0%
GTTCTTATAAATCGGACCGG+AGG + chr6.3:81591493-81591512 MS.gene72237:intron 45.0%
TAAGATGGAGTGGTGTAGAC+GGG + chr6.3:81593238-81593257 MS.gene72237:intron 45.0%
TACTTCCTCAGAGGAAGGTA+TGG + chr6.3:81594222-81594241 MS.gene72237:intron 45.0%
TATTTGCAGAACAAAGCCGC+CGG + chr6.3:81594166-81594185 MS.gene72237:intron 45.0%
TGAGTACTCCATTCGCCATT+CGG + chr6.3:81591351-81591370 MS.gene72237:intron 45.0%
TGGGCTTGCAAAACGATATC+GGG + chr6.3:81593783-81593802 MS.gene72237:CDS 45.0%
TGTGATTCTGGCATATCCAC+TGG + chr6.3:81592198-81592217 MS.gene72237:intron 45.0%
TTCCTGTAGCGAGCAACAAT+CGG + chr6.3:81595294-81595313 MS.gene72237:CDS 45.0%
TTGTTACCGCAGTGCATGTT+TGG + chr6.3:81592455-81592474 MS.gene72237:intron 45.0%
! ACCGGAGGGAGTATAAGTAA+GGG + chr6.3:81591508-81591527 MS.gene72237:intron 45.0%
! ACTTTCTCATGGGACTTGGT+CGG + chr6.3:81593606-81593625 MS.gene72237:CDS 45.0%
! ATGGGTTATGGAAAGCCTCA+AGG - chr6.3:81594882-81594901 None:intergenic 45.0%
! CTAACGGATGAGAAGAGAAG+AGG - chr6.3:81593968-81593987 None:intergenic 45.0%
! CTCTACTCTTTTGTGACTGC+TGG - chr6.3:81595175-81595194 None:intergenic 45.0%
! GTGCTTTTGTACTTCCTCAG+AGG + chr6.3:81594213-81594232 MS.gene72237:CDS 45.0%
! GTTTTCCTTTTCCATTGCGG+TGG + chr6.3:81591615-81591634 MS.gene72237:intron 45.0%
! TCAGACAATGCCACTTCTTC+TGG + chr6.3:81595464-81595483 MS.gene72237:CDS 45.0%
! TCTATGGTTTGCAGCTTCAG+TGG - chr6.3:81595797-81595816 None:intergenic 45.0%
! TTGGCTTCTGAGAATCCTCT+TGG + chr6.3:81595524-81595543 MS.gene72237:CDS 45.0%
!! CCGGTTTTATATCCCTATGG+AGG - chr6.3:81593583-81593602 None:intergenic 45.0%
!! CCTTTAGGTTTTGCCATGGA+AGG - chr6.3:81594348-81594367 None:intergenic 45.0%
!! TCAAGAAGCACCAACCTTGT+TGG - chr6.3:81595343-81595362 None:intergenic 45.0%
!!! TTCATTTTTATTATTATTAT+TGG + chr6.3:81591817-81591836 MS.gene72237:intron 5.0%
AAGATGGAGTGGTGTAGACG+GGG + chr6.3:81593239-81593258 MS.gene72237:intron 50.0%
AGGGACAATTGAGACGTTGG+AGG - chr6.3:81592801-81592820 None:intergenic 50.0%
AGTAGCCACCGCAATGGAAA+AGG - chr6.3:81591623-81591642 None:intergenic 50.0%
ATAGCGCTTAGTGAGCCTTG+AGG + chr6.3:81594864-81594883 MS.gene72237:intron 50.0%
ATTTGCAGAACAAAGCCGCC+GGG + chr6.3:81594167-81594186 MS.gene72237:intron 50.0%
CACCGTAAGGCTACGAAAGA+AGG - chr6.3:81593397-81593416 None:intergenic 50.0%
CCAGTGACTCCAAATCATCC+CGG - chr6.3:81594188-81594207 None:intergenic 50.0%
CCCCTTACTTATACTCCCTC+CGG - chr6.3:81591512-81591531 None:intergenic 50.0%
CGCCTCAGGAATCCATAATC+AGG - chr6.3:81594600-81594619 None:intergenic 50.0%
CGGGAGTTATTTGCTCGAGA+AGG + chr6.3:81594627-81594646 MS.gene72237:CDS 50.0%
CTTGACAGCAACGATCTCGA+AGG - chr6.3:81591903-81591922 None:intergenic 50.0%
GAATGCCATACCTTCCTCTG+AGG - chr6.3:81594230-81594249 None:intergenic 50.0%
GCAAACCATAGACATGGGCA+AGG + chr6.3:81595805-81595824 MS.gene72237:CDS 50.0%
GCTCTTACGGTATGTTCGAG+TGG + chr6.3:81590969-81590988 MS.gene72237:intron 50.0%
GCTTCTTTGTCGCAGCCTTT+AGG - chr6.3:81594363-81594382 None:intergenic 50.0%
GGGCAAGGGAGCAGTAAAAT+TGG + chr6.3:81595820-81595839 MS.gene72237:CDS 50.0%
GGTTTGCAGCTTCAGTGGAT+GGG - chr6.3:81595792-81595811 None:intergenic 50.0%
GTGCTTGTGTTGCACATGTC+AGG + chr6.3:81593744-81593763 MS.gene72237:intron 50.0%
GTTTGCAGCTTCAGTGGATG+GGG - chr6.3:81595791-81595810 None:intergenic 50.0%
TCCTGTAGCGAGCAACAATC+GGG + chr6.3:81595295-81595314 MS.gene72237:CDS 50.0%
TCTGTTGTGTTGCAGGAGAC+TGG + chr6.3:81592605-81592624 MS.gene72237:intron 50.0%
TGATGTGGGTTCAAATGCCG+TGG + chr6.3:81594798-81594817 MS.gene72237:intron 50.0%
TTAGGACGCAAGATCGGAAG+TGG + chr6.3:81591741-81591760 MS.gene72237:intron 50.0%
TTGTTGCTCGCTACAGGAAC+CGG - chr6.3:81595293-81595312 None:intergenic 50.0%
! ATTCCTGAGGCGCCTATTTC+GGG + chr6.3:81594608-81594627 MS.gene72237:CDS 50.0%
! CCGGAGGGAGTATAAGTAAG+GGG + chr6.3:81591509-81591528 MS.gene72237:intron 50.0%
! CGCAGGCTCAATATGGGTTA+TGG - chr6.3:81594894-81594913 None:intergenic 50.0%
! CGGGATGATTTGGAGTCACT+GGG + chr6.3:81594186-81594205 MS.gene72237:CDS 50.0%
! GACCGGAGGGAGTATAAGTA+AGG + chr6.3:81591507-81591526 MS.gene72237:intron 50.0%
! GATTCCTGAGGCGCCTATTT+CGG + chr6.3:81594607-81594626 MS.gene72237:CDS 50.0%
! TGGTTTGCAGCTTCAGTGGA+TGG - chr6.3:81595793-81595812 None:intergenic 50.0%
!! GCAGCCTTTAGGTTTTGCCA+TGG - chr6.3:81594352-81594371 None:intergenic 50.0%
!! TATAGTGGTGCTGTAGCGCT+GGG + chr6.3:81592969-81592988 MS.gene72237:intron 50.0%
ACAAAGCCGCCGGGATGATT+TGG + chr6.3:81594176-81594195 MS.gene72237:CDS 55.0%
ACTTGGTCGGAAGGCAAACC+TGG + chr6.3:81593619-81593638 MS.gene72237:CDS 55.0%
AGTGGATGGGGAAGGCTTCA+AGG - chr6.3:81595779-81595798 None:intergenic 55.0%
CAACAATCGGGCAATGCCCA+TGG + chr6.3:81595307-81595326 MS.gene72237:CDS 55.0%
CAGAGTCCACAAATCGGCCA+CGG - chr6.3:81594818-81594837 None:intergenic 55.0%
CCAATCGCCACATCCCATAC+AGG + chr6.3:81593815-81593834 MS.gene72237:CDS 55.0%
CCTGTATGGGATGTGGCGAT+TGG - chr6.3:81593818-81593837 None:intergenic 55.0%
CGGACACCAAACATGCACTG+CGG - chr6.3:81592464-81592483 None:intergenic 55.0%
GAAGAGAGTAGCCACCGCAA+TGG - chr6.3:81591629-81591648 None:intergenic 55.0%
GAATTCAACACGCGGACGGA+TGG - chr6.3:81591583-81591602 None:intergenic 55.0%
GAGTCCCGCAGGCTCAATAT+GGG - chr6.3:81594900-81594919 None:intergenic 55.0%
GCGCTACAGCACCACTATAG+CGG - chr6.3:81592968-81592987 None:intergenic 55.0%
GTGACTCCAAATCATCCCGG+CGG - chr6.3:81594185-81594204 None:intergenic 55.0%
TGAGTCCCGCAGGCTCAATA+TGG - chr6.3:81594901-81594920 None:intergenic 55.0%
TGCTCCCTTGCCCATGTCTA+TGG - chr6.3:81595813-81595832 None:intergenic 55.0%
TTTGTTGGGGCCTAGTCTCG+AGG + chr6.3:81593284-81593303 MS.gene72237:intron 55.0%
! CCGGGATGATTTGGAGTCAC+TGG + chr6.3:81594185-81594204 MS.gene72237:CDS 55.0%
! TCTCATGGGACTTGGTCGGA+AGG + chr6.3:81593610-81593629 MS.gene72237:CDS 55.0%
! TGGGATGTGGCGATTGGTTG+TGG - chr6.3:81593812-81593831 None:intergenic 55.0%
!! ATAGTGGTGCTGTAGCGCTG+GGG + chr6.3:81592970-81592989 MS.gene72237:intron 55.0%
!! CAAATGCCGTGGCCGATTTG+TGG + chr6.3:81594809-81594828 MS.gene72237:intron 55.0%
!! CTATAGTGGTGCTGTAGCGC+TGG + chr6.3:81592968-81592987 MS.gene72237:intron 55.0%
!! TTAGGTGGATTGAGTCCCGC+AGG - chr6.3:81594911-81594930 None:intergenic 55.0%
ACTCCCGAAATAGGCGCCTC+AGG - chr6.3:81594614-81594633 None:intergenic 60.0%
GCAGCTTCAGTGGATGGGGA+AGG - chr6.3:81595787-81595806 None:intergenic 60.0%
GCCCGATTGTTGCTCGCTAC+AGG - chr6.3:81595299-81595318 None:intergenic 60.0%
TCAACACGCGGACGGATGGA+CGG - chr6.3:81591579-81591598 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 81590796 81595891 81590796 ID=MS.gene72237
chr6.3 mRNA 81590796 81595891 81590796 ID=MS.gene72237.t1;Parent=MS.gene72237
chr6.3 exon 81590796 81590926 81590796 ID=MS.gene72237.t1.exon1;Parent=MS.gene72237.t1
chr6.3 CDS 81590796 81590926 81590796 ID=cds.MS.gene72237.t1;Parent=MS.gene72237.t1
chr6.3 exon 81593299 81593371 81593299 ID=MS.gene72237.t1.exon2;Parent=MS.gene72237.t1
chr6.3 CDS 81593299 81593371 81593299 ID=cds.MS.gene72237.t1;Parent=MS.gene72237.t1
chr6.3 exon 81593545 81593640 81593545 ID=MS.gene72237.t1.exon3;Parent=MS.gene72237.t1
chr6.3 CDS 81593545 81593640 81593545 ID=cds.MS.gene72237.t1;Parent=MS.gene72237.t1
chr6.3 exon 81593766 81593836 81593766 ID=MS.gene72237.t1.exon4;Parent=MS.gene72237.t1
chr6.3 CDS 81593766 81593836 81593766 ID=cds.MS.gene72237.t1;Parent=MS.gene72237.t1
chr6.3 exon 81594028 81594089 81594028 ID=MS.gene72237.t1.exon5;Parent=MS.gene72237.t1
chr6.3 CDS 81594028 81594089 81594028 ID=cds.MS.gene72237.t1;Parent=MS.gene72237.t1
chr6.3 exon 81594175 81594238 81594175 ID=MS.gene72237.t1.exon6;Parent=MS.gene72237.t1
chr6.3 CDS 81594175 81594238 81594175 ID=cds.MS.gene72237.t1;Parent=MS.gene72237.t1
chr6.3 exon 81594345 81594429 81594345 ID=MS.gene72237.t1.exon7;Parent=MS.gene72237.t1
chr6.3 CDS 81594345 81594429 81594345 ID=cds.MS.gene72237.t1;Parent=MS.gene72237.t1
chr6.3 exon 81594522 81594648 81594522 ID=MS.gene72237.t1.exon8;Parent=MS.gene72237.t1
chr6.3 CDS 81594522 81594648 81594522 ID=cds.MS.gene72237.t1;Parent=MS.gene72237.t1
chr6.3 exon 81595129 81595211 81595129 ID=MS.gene72237.t1.exon9;Parent=MS.gene72237.t1
chr6.3 CDS 81595129 81595211 81595129 ID=cds.MS.gene72237.t1;Parent=MS.gene72237.t1
chr6.3 exon 81595290 81595347 81595290 ID=MS.gene72237.t1.exon10;Parent=MS.gene72237.t1
chr6.3 CDS 81595290 81595347 81595290 ID=cds.MS.gene72237.t1;Parent=MS.gene72237.t1
chr6.3 exon 81595438 81595553 81595438 ID=MS.gene72237.t1.exon11;Parent=MS.gene72237.t1
chr6.3 CDS 81595438 81595553 81595438 ID=cds.MS.gene72237.t1;Parent=MS.gene72237.t1
chr6.3 exon 81595715 81595891 81595715 ID=MS.gene72237.t1.exon12;Parent=MS.gene72237.t1
chr6.3 CDS 81595715 81595891 81595715 ID=cds.MS.gene72237.t1;Parent=MS.gene72237.t1
Gene Sequence

>MS.gene72237

ATGGAAGGGAAACTATCTCAAGACACTATTCGCCTACAACCTCTTACAGAAGTGCAAATCATGTGGGATGCTCTCAAGATTGCTCACATGTTTAAGCCAAACACGAAAGACTGGAATGAGAATTTCAACTGGTATGTTTTTGACACAAGAACAAATCAGATTTTAAATACACCGCTCTTACGGTATGTTCGAGTGGACATATTTTATATAATTAAAGGTTAAAATTGTTCTTGTTCCCTATAAATAAGTCCACGTTTTGTTTTAATCCCTCTAAAAAAATTCCCAGCTTTTAGTTTCTTAAAAGTTTTTCATTTTAACTTTTTGTCCATCCTTTAAAGTAAACTCATATATATAATTCATATTTTTGAATAAAATTTTGCATAAAAAGAATCTCTAAAAAAAATTAGAATTTTTTAACTAATCATGAGTGAACGGGGATTGAAAATTTTAAATGAATTAAAAGTTGAAGGAAATTTTTATAACGATTAAAACGTAAAGTTAATATATTTACTAGGATAAAAACGTGTTTAACCATGTAATTAACACAATGTTAAATGAGTACTCCATTCGCCATTCGGTACTATTTACAATAAACAAATAATTTTTTAGATAGACTTTTTAGATTGAATAATTTATGTATCTAGTCAAGAATCTAAACCACATACATAAATTATTCAACGTATCTAAAAATTCAATTGTTCTTATAAATCGGACCGGAGGGAGTATAAGTAAGGGGAAGAAGATGTAAGAAGAGATTGATTGATAAAAAGACAAAAGTATCCGTCCATCCGTCCGCGTGTTGAATTCATTTCATTCATAGTTTTCCTTTTCCATTGCGGTGGCTACTCTCTTCTTCTTCTTCTTCTTCTTCTTCTGTTGCTTCTTCACGCTAAGCGCGAGTAATATCTCAGATTCATGGATCGAATCATCGGTGATAAATTCAAGTTAGGACGCAAGATCGGAAGTGGATCCTTCGGTGAAATCTATCTCGGTCTCTTCCTTCAATCAATCAAATTCTCTTTTCATTTTTATTATTATTATTGGTTTTGATTTTGATTTTGATTTTGATTCAATTTTATGATTTTGCAGCTACTCATATTGATACCTTCGAGATCGTTGCTGTCAAGATCGTATGTTTCATCCATTTCTTCTTTTTTTTTTTTTTTGTAATTTAATTTGAATTTGTGTAAATTGAATTGAACTTGTTAGTGTATGTTTTTTTATCACGGTAGATTTGCCAGAATTACAGTGAACCTCAAGATACTGTGATTCTGGTATATCCATGGTGATACCAAACATGCTTAAAGAAAGTTTGCTAAATTAAATTGAATTGTTTAGCCATGTTATTGTCATGTTTGGTATCATGGTAGATTTACCAGAATCACAGTAAACCATGAGATACTGTGATTCTGGCATATCCACTGGGATACCAAACATACTTTCAACAAATTTGCTAATTAAATAAAATTATTTAACTATGTTATTGGCATGTTTTGTATCAATACGAGTAAAATTGATTTTGATGTGTTTGTTGTCCTTGAGTCGAATTGATTTTGTCTACAGAAGCTAAGATGTGATTTTTACAATGAAATTTATTGTTTGACTCATTTTTACATTCAACTCACTTTTTAGTAAAATCAATTCATTCAAAATCAGTTTTTGTTACCGCAGTGCATGTTTGGTGTCCGAATGATTTGTCAGAATCATTGTGAACCATAGTGATTTGTATGGTTTATCGTGATTTTGGCATACTCCTTGTGATACCAAACACACTTTTAGTTTTAGCTTAGTTTTTAATTTTGTTGTTTTTCTGTTGTGTTGCAGGAGACTGGTAAAACGAAGCATCCACAATTGCTTTATGAAGCCAAGCTCTATAATATTCTTCAAGGAGGAAGTATGCTTCTTTCTTTTTCCTTTCATTATTTTCATTGTTGTGGGCACAACTTGAGATTAAATGCGGAGTTTATTTGATTGTTGAGAAATGAAATGTGTCAGTTTGGATCCTCCAACGTCTCAATTGTCCCTAAAAATACAATTTTTAGGGATATTTTTGTTTCTGTCAAGGACAATTTTGTCCGATATTTGACATTTTAGAGGACTGAGTCGACATTTTTCATTTCTCTTGGATTAAATAGGTGTTCATGTATTTACTCAGGTGTTGTCAAGTATCCGCTATAGTGGTGCTGTAGCGCTGGGGTGTAGTAACAAATTGCTATTGTTCTACAATACAATGTTTAGTACAAAATGTTTGTCAAATAGCAATTTGAAAAGAAAAAATAAAACACTTTTTCCCAATCTGCAATTGACAACATTGATTTACTCTAATAACAATAACACATTTAAGCAGTAAGTATATTTGCGTTCTTGCTATTGTTATTGTTGTTGGGATTTAATTGAAAATGTTGGATTTTTGTTTAATTAATACAGGTGGTATCCCAAGCATAAGATGGAGTGGTGTAGACGGGGAAGACAATGTGCTTGTTATGGATTTGTTGGGGCCTAGTCTCGAGGATCTTTTTGTTTACTGTGGAAGAAAATTCTCCCTCAAAACTGTCTTGATGTTGGCTGATCAAATGGTAACCCCCATCCCTTTTAGTTCCTTCTTTCGTAGCCTTACGGTGTTTTTTAGTGTCAGTCCCAGAGTATATGTCATTTGTGCCACTGTTATATATCTTGTCATGTGGTTATGATGCCAAGCGAGAGAAGTGTGCATTTGTAAAGGTATTAACATGTTTTTATTTGGGTGCAGATGACCAGAATAGAGTATGTGCATTCTAAAGGGTTCCTCCATAGGGATATAAAACCGGATAACTTTCTCATGGGACTTGGTCGGAAGGCAAACCTGGTGAGTGAATACCCAGTTTTTAATTGTTTCCTTACATTTAGAATTGACTGATCCTGTCATTCCTTGAACTAGTTGTTTGATCGAATTGATGTGCTGTATACGTGTGCTTGTGTTGCACATGTCAGGTATATGTAATTGATTTTGGGCTTGCAAAACGATATCGGGACTCCACAACCAATCGCCACATCCCATACAGGTTTTGAACTTTCTATCATTGTAATCCATTGTTAATTCATTCACTTTATCTTCGGCCTCTTTTTTTACTGGGTTTGATGTTAATATTGAAAATTTCTTCTGATTTTGCGTGTAGATTTCTTTCCTTTACCTCTTCTCTTCTCATCCGTTAGAAATACCCAAAATTAATACTTAATGAATTTTACCTCACAGGGAGAACAAAAACTTAACAGGGACTGCGCGTTATGCAAGCTGCAATACTCATCTTGGGATTGGTATGTCAGAAGAAATTATTTAAGCCCTTCACGTCAAACAAATTGCAGTTATTTTCATTATGTTAATTCTCTATTTTATTTGCAGAACAAAGCCGCCGGGATGATTTGGAGTCACTGGGATATGTGCTTTTGTACTTCCTCAGAGGAAGGTATGGCATTCTTATCTAGTTATTTGGCTTCGAGAAGCAATTTTTGCATTTACTAGCAACATAAATATATGTTCTGATCTTTACGCTACTTAATATTTGTGTTTAGCCTTCCATGGCAAAACCTAAAGGCTGCGACAAAGAAGCAAAAGTATGATAAAATATGTGAAAAGAAAGTATCAACTCCTATTGAGGTAAGCATCTGCACATATATCTATTCTGAATGCATTTTTTTTTTTTTTTTTTTGTTATCATCACAATCTTATTTGTCTGTTGTTTTGTGTAGGTTTTATGCAAATCTCATCCTGTAGAGTTTGCTTCATACTTCCATTACTGCCATTCTTTGACCTTTGATCAGCGACCTGATTATGGATTCCTGAGGCGCCTATTTCGGGAGTTATTTGCTCGAGAAGGTGATTATAAATGTTCATCAAGTCATCTTTATAATCTTAACATTTACATGTTTAGTGTTGTGCAACAATAGCCTTGTTCAAAGCGTAAATCACAAGCCAACAAATGCTTTTTCAGTTGGTATGGATTCAACTTATATTCCATTCCACAATGATGTGGGTTCAAATGCCGTGGCCGATTTGTGGACTCTGATAGTGGGTAATATGTAAGTGCCTTTATAGCGCTTAGTGAGCCTTGAGGCTTTCCATAACCCATATTGAGCCTGCGGGACTCAATCCACCTAAACTTCATTCATAAAAAATAAAAAAATAAAAAAAAATCATAAAAAAACTGATGTTAAATGGGCAGTTTGTTTTGATCAACTTACGTGTTCCTCCATACGCAAAATTCATATTCTTTTGTGGTAAAGTTAGCTGAATTTGTCTTTGTTTTCACATCTACGCCGAAATGTAACATCCCCACTCATTTCCGGTTTATGACAGGTTACAAATTTGATTATGTATTTGATTGGACAATTTTGAAGTACCAGCAGTCACAAAAGAGTAGAGCTCAGACTCACATATCCGTAAGTATATTTGTGTGTGTGTAGATTTGGGTTGAGTCTTCCCATGCATCTGAAAATATTTATTTTGTCATATTGCAGCCGGTTCCTGTAGCGAGCAACAATCGGGCAATGCCCATGGATATTGATAACCAACAAGGTTGGTGCTTCTTGAACCATATTTTGTTGTGCTGCATAATAAAATGTCTTGTTCATTATTACTAATTGACAAGGATTAATGCTTATACAGGGAATGTCTCTGCAGAGCAAATTAGATCAGACAATGCCACTTCTTCTGGTGTTAAGTTCCAGTTTAAATCATCAGGCGGTAAAAATTTGGCTTCTGAGAATCCTCTTGGCAAGAATGTAAGTCGTCTTACATGGAGTAAAAAAGTTTCATTCCTTTCTACTGAATCTGTGCAGCACTGAGTCACAATTCTTTAGTTGCGCACCTTTGTGTTTCAAACTTGTGAAATAGACGAGTGTTTAATGACCAAATTTTAATCTGTTGTTTATTATTTTTGTAGATTTTTGGTGAAGCAACTATCCCTTCTACTTCACACTCTTTTGAAGCATCAAGAAGGAACTCCTTGAAGCCTTCCCCATCCACTGAAGCTGCAAACCATAGACATGGGCAAGGGAGCAGTAAAATTGGTCCTTCAAGTAGTCGGATGAATGTTCTTCACATAAGTTCTGCTAAATAA
Protein sequence

>MS.gene72237.t1

MEGKLSQDTIRLQPLTEVQIMWDALKIAHMFKPNTKDWNENFNCLEDLFVYCGRKFSLKTVLMLADQMMTRIEYVHSKGFLHRDIKPDNFLMGLGRKANLVYVIDFGLAKRYRDSTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQNLKAATKKQKYDKICEKKVSTPIEVLCKSHPVEFASYFHYCHSLTFDQRPDYGFLRRLFRELFAREGYKFDYVFDWTILKYQQSQKSRAQTHISPVPVASNNRAMPMDIDNQQGNVSAEQIRSDNATSSGVKFQFKSSGGKNLASENPLGKNIFGEATIPSTSHSFEASRRNSLKPSPSTEAANHRHGQGSSKIGPSSSRMNVLHISSAK