Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72349.t1 | KEH31637.1 | 77.4 | 518 | 84 | 2 | 65 | 554 | 3 | 515 | 1.20E-229 | 805.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72349.t1 | F4IXE7 | 32.2 | 419 | 246 | 14 | 143 | 537 | 619 | 1023 | 5.5e-53 | 210.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72349.t1 | A0A072UPL4 | 77.4 | 518 | 84 | 2 | 65 | 554 | 3 | 515 | 8.9e-230 | 805.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene72349.t1 | TR | PHD |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72349.t1 | MTR_4g099530 | 82.792 | 523 | 47 | 3 | 65 | 554 | 3 | 515 | 0.0 | 891 |
MS.gene72349.t1 | MTR_1g103830 | 33.482 | 448 | 251 | 14 | 142 | 554 | 603 | 1038 | 3.40e-65 | 231 |
MS.gene72349.t1 | MTR_1g072130 | 32.701 | 422 | 248 | 10 | 142 | 537 | 809 | 1220 | 6.97e-63 | 224 |
MS.gene72349.t1 | MTR_2g078040 | 30.024 | 423 | 262 | 13 | 139 | 537 | 754 | 1166 | 6.41e-53 | 195 |
MS.gene72349.t1 | MTR_5g071340 | 28.509 | 456 | 280 | 17 | 111 | 537 | 646 | 1084 | 3.12e-48 | 181 |
MS.gene72349.t1 | MTR_3g464550 | 26.444 | 450 | 284 | 15 | 122 | 544 | 585 | 1014 | 4.86e-45 | 171 |
MS.gene72349.t1 | MTR_7g109640 | 28.894 | 398 | 233 | 12 | 144 | 510 | 383 | 761 | 1.65e-41 | 160 |
MS.gene72349.t1 | MTR_5g024500 | 26.932 | 427 | 268 | 11 | 145 | 537 | 3 | 419 | 4.15e-40 | 151 |
MS.gene72349.t1 | MTR_5g024390 | 26.698 | 427 | 269 | 11 | 145 | 537 | 3 | 419 | 3.33e-39 | 149 |
MS.gene72349.t1 | MTR_7g095140 | 28.435 | 313 | 202 | 8 | 250 | 553 | 17 | 316 | 6.82e-33 | 129 |
MS.gene72349.t1 | MTR_3g103120 | 23.467 | 473 | 300 | 14 | 105 | 537 | 382 | 832 | 4.91e-32 | 132 |
MS.gene72349.t1 | MTR_3g103110 | 28.076 | 317 | 196 | 9 | 239 | 537 | 489 | 791 | 2.16e-31 | 129 |
MS.gene72349.t1 | MTR_1g068930 | 24.379 | 443 | 234 | 16 | 155 | 527 | 435 | 846 | 2.56e-28 | 120 |
MS.gene72349.t1 | MTR_1g068930 | 24.379 | 443 | 234 | 16 | 155 | 527 | 472 | 883 | 2.68e-28 | 120 |
MS.gene72349.t1 | MTR_1g062330 | 23.696 | 460 | 255 | 13 | 155 | 537 | 362 | 802 | 2.79e-27 | 117 |
MS.gene72349.t1 | MTR_4g056990 | 24.390 | 451 | 254 | 16 | 155 | 543 | 200 | 625 | 8.95e-26 | 112 |
MS.gene72349.t1 | MTR_7g102610 | 22.045 | 440 | 242 | 14 | 155 | 515 | 507 | 924 | 1.47e-25 | 112 |
MS.gene72349.t1 | MTR_4g050090 | 22.318 | 466 | 255 | 14 | 155 | 537 | 200 | 641 | 9.88e-24 | 106 |
MS.gene72349.t1 | MTR_4g057290 | 23.899 | 477 | 246 | 18 | 124 | 511 | 66 | 514 | 4.01e-20 | 94.4 |
MS.gene72349.t1 | MTR_3g103160 | 32.317 | 164 | 108 | 2 | 375 | 537 | 275 | 436 | 1.14e-19 | 92.0 |
MS.gene72349.t1 | MTR_2g084425 | 25.714 | 175 | 125 | 2 | 364 | 535 | 844 | 1016 | 1.71e-17 | 86.7 |
MS.gene72349.t1 | MTR_2g084425 | 25.957 | 235 | 148 | 11 | 64 | 296 | 389 | 599 | 9.29e-11 | 65.5 |
MS.gene72349.t1 | MTR_2g084425 | 26.809 | 235 | 146 | 11 | 64 | 296 | 389 | 599 | 9.68e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72349.t1 | AT4G14920 | 35.154 | 421 | 236 | 11 | 142 | 538 | 577 | 984 | 1.64e-69 | 243 |
MS.gene72349.t1 | AT4G14920 | 35.154 | 421 | 236 | 11 | 142 | 538 | 577 | 984 | 1.70e-69 | 243 |
MS.gene72349.t1 | AT4G14920 | 35.154 | 421 | 236 | 11 | 142 | 538 | 577 | 984 | 1.70e-69 | 243 |
MS.gene72349.t1 | AT5G36740 | 33.333 | 441 | 259 | 10 | 124 | 538 | 519 | 950 | 1.02e-67 | 238 |
MS.gene72349.t1 | AT5G36740 | 33.333 | 441 | 259 | 10 | 124 | 538 | 519 | 950 | 1.02e-67 | 238 |
MS.gene72349.t1 | AT5G36740 | 33.411 | 428 | 245 | 10 | 142 | 538 | 389 | 807 | 6.55e-67 | 234 |
MS.gene72349.t1 | AT1G05380 | 33.256 | 430 | 242 | 12 | 142 | 542 | 517 | 930 | 3.95e-66 | 233 |
MS.gene72349.t1 | AT1G05380 | 33.256 | 430 | 242 | 12 | 142 | 542 | 517 | 930 | 3.95e-66 | 233 |
MS.gene72349.t1 | AT1G05380 | 33.256 | 430 | 242 | 12 | 142 | 542 | 517 | 930 | 3.95e-66 | 233 |
MS.gene72349.t1 | AT5G36670 | 31.072 | 457 | 262 | 12 | 124 | 538 | 519 | 964 | 8.75e-58 | 209 |
MS.gene72349.t1 | AT5G36670 | 31.072 | 457 | 262 | 12 | 124 | 538 | 519 | 964 | 8.75e-58 | 209 |
MS.gene72349.t1 | AT3G14980 | 32.220 | 419 | 246 | 14 | 143 | 537 | 574 | 978 | 1.11e-57 | 209 |
MS.gene72349.t1 | AT3G14980 | 32.220 | 419 | 246 | 14 | 143 | 537 | 619 | 1023 | 1.43e-57 | 208 |
MS.gene72349.t1 | AT3G14980 | 32.220 | 419 | 246 | 14 | 143 | 537 | 619 | 1023 | 1.43e-57 | 208 |
MS.gene72349.t1 | AT3G14980 | 32.220 | 419 | 246 | 14 | 143 | 537 | 619 | 1023 | 1.43e-57 | 208 |
MS.gene72349.t1 | AT3G14980 | 32.220 | 419 | 246 | 14 | 143 | 537 | 619 | 1023 | 2.31e-57 | 207 |
MS.gene72349.t1 | AT5G36670 | 31.081 | 444 | 248 | 12 | 142 | 538 | 389 | 821 | 1.08e-56 | 205 |
MS.gene72349.t1 | AT5G36670 | 30.621 | 467 | 261 | 13 | 124 | 538 | 519 | 974 | 1.82e-56 | 205 |
MS.gene72349.t1 | AT5G36740 | 32.199 | 382 | 225 | 9 | 124 | 479 | 519 | 892 | 5.71e-52 | 191 |
MS.gene72349.t1 | AT5G36740 | 32.199 | 382 | 225 | 9 | 124 | 479 | 519 | 892 | 5.71e-52 | 191 |
MS.gene72349.t1 | AT5G36670 | 32.199 | 382 | 225 | 9 | 124 | 479 | 519 | 892 | 5.71e-52 | 191 |
MS.gene72349.t1 | AT5G58610 | 28.009 | 432 | 264 | 14 | 139 | 538 | 362 | 778 | 5.73e-40 | 155 |
MS.gene72349.t1 | AT5G58610 | 28.009 | 432 | 264 | 14 | 139 | 538 | 584 | 1000 | 9.31e-40 | 155 |
MS.gene72349.t1 | AT5G58610 | 28.009 | 432 | 264 | 14 | 139 | 538 | 593 | 1009 | 9.33e-40 | 155 |
MS.gene72349.t1 | AT5G58610 | 28.009 | 432 | 264 | 14 | 139 | 538 | 593 | 1009 | 9.79e-40 | 155 |
MS.gene72349.t1 | AT5G58610 | 28.009 | 432 | 264 | 14 | 139 | 538 | 593 | 1009 | 9.79e-40 | 155 |
MS.gene72349.t1 | AT5G58610 | 28.009 | 432 | 264 | 14 | 139 | 538 | 584 | 1000 | 1.27e-39 | 155 |
MS.gene72349.t1 | AT5G58610 | 26.540 | 422 | 257 | 13 | 139 | 538 | 584 | 974 | 3.18e-37 | 147 |
MS.gene72349.t1 | AT5G58610 | 26.540 | 422 | 257 | 13 | 139 | 538 | 584 | 974 | 4.02e-37 | 147 |
MS.gene72349.t1 | AT3G14980 | 31.003 | 329 | 190 | 13 | 143 | 447 | 619 | 934 | 8.59e-35 | 140 |
MS.gene72349.t1 | AT3G53680 | 24.390 | 451 | 251 | 16 | 155 | 537 | 403 | 831 | 5.63e-33 | 134 |
MS.gene72349.t1 | AT3G53680 | 24.390 | 451 | 251 | 16 | 155 | 537 | 405 | 833 | 6.12e-33 | 134 |
MS.gene72349.t1 | AT2G37520 | 23.736 | 455 | 250 | 15 | 155 | 537 | 386 | 815 | 1.32e-32 | 133 |
MS.gene72349.t1 | AT5G58610 | 27.778 | 378 | 227 | 13 | 139 | 484 | 593 | 956 | 1.29e-31 | 130 |
MS.gene72349.t1 | AT5G58610 | 27.778 | 378 | 227 | 13 | 139 | 484 | 584 | 947 | 2.01e-31 | 130 |
MS.gene72349.t1 | AT2G36720 | 24.078 | 461 | 248 | 16 | 155 | 535 | 533 | 971 | 4.94e-29 | 122 |
MS.gene72349.t1 | AT2G36720 | 24.078 | 461 | 248 | 16 | 155 | 535 | 533 | 971 | 4.94e-29 | 122 |
MS.gene72349.t1 | AT2G27980 | 24.516 | 465 | 249 | 16 | 155 | 537 | 613 | 1057 | 9.33e-29 | 122 |
MS.gene72349.t1 | AT5G58610 | 27.059 | 340 | 202 | 13 | 139 | 446 | 584 | 909 | 4.51e-23 | 104 |
MS.gene72349.t1 | AT5G63900 | 25.424 | 295 | 205 | 8 | 246 | 537 | 258 | 540 | 3.94e-21 | 97.4 |
Find 121 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTCCCATTGATATTATTT+TGG | 0.141230 | 8.3:-21133285 | None:intergenic |
ACGAATTTGCCATTTGTTAA+TGG | 0.158481 | 8.3:+21134150 | MS.gene72349:CDS |
TCACTTATTTCCACATAATT+TGG | 0.186213 | 8.3:-21131946 | None:intergenic |
TCCCAGAAATTACCTATTTC+AGG | 0.195115 | 8.3:-21132066 | None:intergenic |
GACCTGAAATAGGTAATTTC+TGG | 0.234540 | 8.3:+21132064 | MS.gene72349:CDS |
CTTTCAACCATTTACTAATC+AGG | 0.274878 | 8.3:-21132575 | None:intergenic |
ATTTACTAATCAGGATGTTT+TGG | 0.283205 | 8.3:-21132566 | None:intergenic |
TTGAAAATTCGACCGGTTAT+CGG | 0.303297 | 8.3:-21132420 | None:intergenic |
AAAACATCCTGATTAGTAAA+TGG | 0.312020 | 8.3:+21132568 | MS.gene72349:CDS |
TCCGGATTAATACTCGTTTC+CGG | 0.320410 | 8.3:-21132162 | None:intergenic |
TGCTTCTAATTGACAGTATT+AGG | 0.322640 | 8.3:-21134716 | None:intergenic |
CCTTGACTCTACAGATTTCA+TGG | 0.325979 | 8.3:+21134073 | MS.gene72349:intron |
CACTTCTCGTATCCATTTGT+TGG | 0.328393 | 8.3:-21133330 | None:intergenic |
TGGACTTGAATGAGCCATTC+GGG | 0.345809 | 8.3:+21134684 | MS.gene72349:CDS |
TCCATTGGCAAACTTTGTTC+CGG | 0.346997 | 8.3:-21132180 | None:intergenic |
TCAGCAGTTTGTGGATTAGA+TGG | 0.350268 | 8.3:-21134542 | None:intergenic |
TTGAAGGGTTAGAAGCAAAC+TGG | 0.364828 | 8.3:+21131995 | MS.gene72349:CDS |
CTTGTTTCGTTCATTGATGA+TGG | 0.366832 | 8.3:-21132210 | None:intergenic |
AAATTACCTATTTCAGGTCT+TGG | 0.368746 | 8.3:-21132060 | None:intergenic |
CGTAGACCAAGACCTGAAAT+AGG | 0.369525 | 8.3:+21132054 | MS.gene72349:CDS |
TAAACAAACAATGTCATGTA+TGG | 0.389738 | 8.3:-21132637 | None:intergenic |
GCATACCTCTTTACAACTTA+CGG | 0.394078 | 8.3:-21133145 | None:intergenic |
TGCAGCTGCTTGCATGTTGA+TGG | 0.397741 | 8.3:+21133384 | MS.gene72349:CDS |
GCAACCATACAAACGCATTT+CGG | 0.399165 | 8.3:+21132521 | MS.gene72349:CDS |
GTTTGTTTAGTTTGTGGAAA+AGG | 0.400119 | 8.3:+21132651 | MS.gene72349:CDS |
TGAAATAGCTACCATTGTTC+CGG | 0.403012 | 8.3:+21132143 | MS.gene72349:CDS |
GAAGTCCCCGCCGTTGCGCT+TGG | 0.407552 | 8.3:-21132288 | None:intergenic |
GCTATTTCATTCACCGATGA+TGG | 0.410514 | 8.3:-21132129 | None:intergenic |
TCAACAAACAAGTCATAATC+TGG | 0.410645 | 8.3:+21132239 | MS.gene72349:CDS |
TACACTGCTTGTTGCATTGG+CGG | 0.412327 | 8.3:-21132951 | None:intergenic |
ACTTACACTGCTTGTTGCAT+TGG | 0.420126 | 8.3:-21132954 | None:intergenic |
GACATTGTTTGTTTAGTTTG+TGG | 0.426333 | 8.3:+21132645 | MS.gene72349:CDS |
CTGCAAGTGCAAATACTGTA+AGG | 0.426643 | 8.3:+21132891 | MS.gene72349:CDS |
GGAATCCAAAATAATATCAA+TGG | 0.427814 | 8.3:+21133280 | MS.gene72349:CDS |
ATTAAGCAAAAGACTTCTAC+TGG | 0.430490 | 8.3:+21134664 | MS.gene72349:CDS |
CTGGACTTGAATGAGCCATT+CGG | 0.434486 | 8.3:+21134683 | MS.gene72349:CDS |
ATGGGAATGAGAGCTATTCT+TGG | 0.435531 | 8.3:+21133299 | MS.gene72349:CDS |
AAAGATTGATGAGAAATTGA+AGG | 0.437819 | 8.3:+21133249 | MS.gene72349:intron |
GAGAAATTGAAGGGATCAAT+CGG | 0.439072 | 8.3:+21133259 | MS.gene72349:CDS |
GAAACTCCAAGCGCAACGGC+GGG | 0.439769 | 8.3:+21132282 | MS.gene72349:CDS |
ACCTGAAATAGGTAATTTCT+GGG | 0.445985 | 8.3:+21132065 | MS.gene72349:CDS |
TTCTCGTATCCATTTGTTGG+AGG | 0.451574 | 8.3:-21133327 | None:intergenic |
CAATTATCTCCATTAACAAA+TGG | 0.453252 | 8.3:-21134159 | None:intergenic |
TTCCACATTTCAGCAGTTTG+TGG | 0.455360 | 8.3:-21134551 | None:intergenic |
ATGTTGATGGAAGAAGCTTT+TGG | 0.456514 | 8.3:+21133397 | MS.gene72349:CDS |
GTTAATGGAGATAATTGAAT+CGG | 0.460264 | 8.3:+21134165 | MS.gene72349:CDS |
TTGCTTAATCGTATAGCTCC+GGG | 0.462605 | 8.3:-21134650 | None:intergenic |
TTGGAGAGTCCTCCAACAAA+TGG | 0.464964 | 8.3:+21133318 | MS.gene72349:CDS |
TTTGCTTAATCGTATAGCTC+CGG | 0.467808 | 8.3:-21134651 | None:intergenic |
GCCACCGAAATGCGTTTGTA+TGG | 0.477551 | 8.3:-21132525 | None:intergenic |
CTAAGGAAAACGACAACCAT+TGG | 0.477768 | 8.3:+21132857 | MS.gene72349:CDS |
TTCGAAGTCTTGAAGTTGAA+AGG | 0.481443 | 8.3:+21134510 | MS.gene72349:CDS |
TGAAGATGGCATATACTTTG+AGG | 0.486004 | 8.3:+21131911 | None:intergenic |
GAATCCAAAATAATATCAAT+GGG | 0.493433 | 8.3:+21133281 | MS.gene72349:CDS |
ACCGAGGTGCGTTATCATGA+TGG | 0.493741 | 8.3:+21132390 | MS.gene72349:CDS |
TTGTTCCGTAAGTTGTAAAG+AGG | 0.493762 | 8.3:+21133140 | MS.gene72349:CDS |
TAGCTCCGGGGAACATCAAA+AGG | 0.501144 | 8.3:-21134637 | None:intergenic |
ATGATAACAGACACACATAC+TGG | 0.502452 | 8.3:+21133421 | MS.gene72349:CDS |
TGGAAAAGGAGAAGATGAAG+GGG | 0.508556 | 8.3:+21132665 | MS.gene72349:CDS |
TCCGGAAACGAGTATTAATC+CGG | 0.511461 | 8.3:+21132161 | MS.gene72349:CDS |
CCGAGGTGCGTTATCATGAT+GGG | 0.519180 | 8.3:+21132391 | MS.gene72349:CDS |
GAAGATGGCATATACTTTGA+GGG | 0.519625 | 8.3:+21131912 | None:intergenic |
AGAAACTCCAAGCGCAACGG+CGG | 0.527874 | 8.3:+21132281 | MS.gene72349:CDS |
TGTGGAAAAGGAGAAGATGA+AGG | 0.530192 | 8.3:+21132663 | MS.gene72349:CDS |
TCCGGAACAAAGTTTGCCAA+TGG | 0.531404 | 8.3:+21132179 | MS.gene72349:CDS |
AAGATTGATGAGAAATTGAA+GGG | 0.532048 | 8.3:+21133250 | MS.gene72349:intron |
AGCACAAGAACGGTGATAAG+TGG | 0.533107 | 8.3:-21132715 | None:intergenic |
GAAAGTGAGTCAAATATTGA+AGG | 0.536289 | 8.3:+21131979 | MS.gene72349:CDS |
GTCGCAACAGCTACATAAGA+TGG | 0.537125 | 8.3:-21132448 | None:intergenic |
GGCTCCATTGAAAATTCGAC+CGG | 0.537301 | 8.3:-21132427 | None:intergenic |
GATGATGGAACTGTTTCCAT+TGG | 0.538815 | 8.3:-21132195 | None:intergenic |
AACTGAAACACCTCCATCAT+CGG | 0.540100 | 8.3:+21132116 | MS.gene72349:CDS |
AGTTGTCAACCATGCTAGGA+TGG | 0.543516 | 8.3:-21132346 | None:intergenic |
CTTGACTCTACAGATTTCAT+GGG | 0.545472 | 8.3:+21134074 | MS.gene72349:intron |
GACCGTCGACCTCGTCGACC+TGG | 0.547724 | 8.3:-21132024 | None:intergenic |
CTGTAAGGGTGATGATGAAG+AGG | 0.550087 | 8.3:+21132906 | MS.gene72349:CDS |
TGGCGGCACATGATGTCTAA+AGG | 0.550630 | 8.3:-21132934 | None:intergenic |
ACTTGCAAGGAAATTGATGA+AGG | 0.553512 | 8.3:+21132366 | MS.gene72349:CDS |
GCCTCATCTGTGGCAATGAA+AGG | 0.555749 | 8.3:-21134115 | None:intergenic |
TGCAAGTTGTCAACCATGCT+AGG | 0.558541 | 8.3:-21132350 | None:intergenic |
GCCTTTCATTGCCACAGATG+AGG | 0.563244 | 8.3:+21134114 | MS.gene72349:CDS |
GATTAGTAAATGGTTGAAAG+AGG | 0.563585 | 8.3:+21132578 | MS.gene72349:CDS |
AAACAAACAATGTCATGTAT+GGG | 0.563802 | 8.3:-21132636 | None:intergenic |
TTATGTAATAAGCAATTCAA+AGG | 0.566767 | 8.3:+21133360 | MS.gene72349:CDS |
ATCCACAAACTGCTGAAATG+TGG | 0.570312 | 8.3:+21134549 | MS.gene72349:CDS |
ACGCACAAGACCAAATTATG+TGG | 0.574274 | 8.3:+21131936 | MS.gene72349:CDS |
GCCTCTGTATGCCTCATCTG+TGG | 0.584277 | 8.3:-21134125 | None:intergenic |
GCGACGAGGAAATCTCTGTA+TGG | 0.591878 | 8.3:+21132466 | MS.gene72349:CDS |
GTGGAAAAGGAGAAGATGAA+GGG | 0.593089 | 8.3:+21132664 | MS.gene72349:CDS |
TGAAGGGTTAGAAGCAAACT+GGG | 0.594789 | 8.3:+21131996 | MS.gene72349:CDS |
AGTTTGTGGATTAGATGGAA+TGG | 0.596743 | 8.3:-21134537 | None:intergenic |
AAAGTGAGTCAAATATTGAA+GGG | 0.601009 | 8.3:+21131980 | MS.gene72349:CDS |
ACCATACAAACGCATTTCGG+TGG | 0.602664 | 8.3:+21132524 | MS.gene72349:CDS |
AATACTCGTTTCCGGAACAA+TGG | 0.603556 | 8.3:-21132154 | None:intergenic |
TAATTGCTGCAGCTACCGTA+AGG | 0.611328 | 8.3:+21133902 | MS.gene72349:CDS |
TGCTTAGATCAAATCTGAGG+AGG | 0.617602 | 8.3:+21133830 | MS.gene72349:intron |
CCTGTATAAAAGCACAAGAA+CGG | 0.617850 | 8.3:-21132725 | None:intergenic |
CCCATCATGATAACGCACCT+CGG | 0.618272 | 8.3:-21132391 | None:intergenic |
ACAAGAACGGTGATAAGTGG+AGG | 0.625049 | 8.3:-21132712 | None:intergenic |
AGCATGGTTGACAACTTGCA+AGG | 0.627667 | 8.3:+21132353 | MS.gene72349:CDS |
TGCAAGTGCAAATACTGTAA+GGG | 0.630487 | 8.3:+21132892 | MS.gene72349:CDS |
ATTTCATTCACCGATGATGG+AGG | 0.630618 | 8.3:-21132126 | None:intergenic |
AAACTCCAAGCGCAACGGCG+GGG | 0.630925 | 8.3:+21132283 | MS.gene72349:CDS |
AACCAGGTCGACGAGGTCGA+CGG | 0.633162 | 8.3:+21132022 | MS.gene72349:CDS |
TGCAGTAAGAACATAACCAA+TGG | 0.637831 | 8.3:-21132873 | None:intergenic |
AATTGCTTAGATCAAATCTG+AGG | 0.638264 | 8.3:+21133827 | MS.gene72349:intron |
AGAAGAAACTCCAAGCGCAA+CGG | 0.640300 | 8.3:+21132278 | MS.gene72349:CDS |
AACGCATTTCGGTGGCAAAG+CGG | 0.641653 | 8.3:+21132532 | MS.gene72349:CDS |
CGAGGTGCGTTATCATGATG+GGG | 0.644006 | 8.3:+21132392 | MS.gene72349:CDS |
CTTGCAAGGAAATTGATGAA+GGG | 0.653849 | 8.3:+21132367 | MS.gene72349:CDS |
TTAGGCTCAACATCCCCGAA+TGG | 0.660828 | 8.3:-21134698 | None:intergenic |
CACACATACTGGCGTCAATG+TGG | 0.663750 | 8.3:+21133432 | MS.gene72349:CDS |
CTTATGTAGCTGTTGCGACG+AGG | 0.663870 | 8.3:+21132452 | MS.gene72349:CDS |
ACAAATGGATACGAGAAGTG+AGG | 0.666914 | 8.3:+21133333 | MS.gene72349:CDS |
GGAAAAGGAGAAGATGAAGG+GGG | 0.669030 | 8.3:+21132666 | MS.gene72349:CDS |
CAAGAACGGTGATAAGTGGA+GGG | 0.669312 | 8.3:-21132711 | None:intergenic |
GCCACAGATGAGGCATACAG+AGG | 0.671197 | 8.3:+21134124 | MS.gene72349:CDS |
AGAGTGTTCTATACAACCGC+AGG | 0.671533 | 8.3:+21133458 | MS.gene72349:CDS |
TGCTTAATCGTATAGCTCCG+GGG | 0.678737 | 8.3:-21134649 | None:intergenic |
GGAAATTGATGAAGGGACCG+AGG | 0.685280 | 8.3:+21132374 | MS.gene72349:CDS |
GGACTTGAATGAGCCATTCG+GGG | 0.695242 | 8.3:+21134685 | MS.gene72349:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | CTTGAAATTTTATTTTTTTT+GGG | - | chr8.3:21133789-21133808 | None:intergenic | 10.0% |
!!! | TTTTTATAATGTTTTATTTC+TGG | - | chr8.3:21132324-21132343 | None:intergenic | 10.0% |
!! | AAACTGAAAAAGATTTATTA+AGG | + | chr8.3:21133112-21133131 | MS.gene72349:CDS | 15.0% |
!!! | AATAATTTGTTATTTCTTCA+CGG | + | chr8.3:21133991-21134010 | MS.gene72349:intron | 15.0% |
!!! | AATCTTTTTCAGTTTTTTTT+AGG | - | chr8.3:21133107-21133126 | None:intergenic | 15.0% |
!!! | AATTTAATTCACTTGTTTTA+AGG | + | chr8.3:21134423-21134442 | MS.gene72349:intron | 15.0% |
!!! | GCTTGAAATTTTATTTTTTT+TGG | - | chr8.3:21133790-21133809 | None:intergenic | 15.0% |
!! | AATCAAATACATGATATTTG+TGG | + | chr8.3:21133211-21133230 | MS.gene72349:intron | 20.0% |
!! | ATCAAATACATGATATTTGT+GGG | + | chr8.3:21133212-21133231 | MS.gene72349:intron | 20.0% |
!! | GAATCCAAAATAATATCAAT+GGG | + | chr8.3:21133281-21133300 | MS.gene72349:CDS | 20.0% |
!! | TGGTAAAAAATATATTTGGT+TGG | - | chr8.3:21133538-21133557 | None:intergenic | 20.0% |
!! | TTATGTAATAAGCAATTCAA+AGG | + | chr8.3:21133360-21133379 | MS.gene72349:CDS | 20.0% |
!!! | ACTTTAGATTAAAAGAGTAT+CGG | + | chr8.3:21133593-21133612 | MS.gene72349:intron | 20.0% |
!!! | AGTTTACAAAATGATTTTGT+AGG | + | chr8.3:21133069-21133088 | MS.gene72349:intron | 20.0% |
!!! | ATAATTTGTTATTTCTTCAC+GGG | + | chr8.3:21133992-21134011 | MS.gene72349:intron | 20.0% |
!!! | CTTTTTCAACTATTTTGTTT+TGG | + | chr8.3:21133950-21133969 | MS.gene72349:intron | 20.0% |
! | AAAACATCCTGATTAGTAAA+TGG | + | chr8.3:21132568-21132587 | MS.gene72349:CDS | 25.0% |
! | AAACAAACAATGTCATGTAT+GGG | - | chr8.3:21132639-21132658 | None:intergenic | 25.0% |
! | AAAGATTGATGAGAAATTGA+AGG | + | chr8.3:21133249-21133268 | MS.gene72349:intron | 25.0% |
! | AAAGTGAGTCAAATATTGAA+GGG | + | chr8.3:21131980-21131999 | MS.gene72349:CDS | 25.0% |
! | AAGATTGATGAGAAATTGAA+GGG | + | chr8.3:21133250-21133269 | MS.gene72349:intron | 25.0% |
! | AATTAAGTTCAATGGAAAAG+TGG | - | chr8.3:21134374-21134393 | None:intergenic | 25.0% |
! | AGATTTGATCTAAGCAATTA+AGG | - | chr8.3:21133826-21133845 | None:intergenic | 25.0% |
! | ATGAATGCAATTAAGTTCAA+TGG | - | chr8.3:21134382-21134401 | None:intergenic | 25.0% |
! | CAAAAAGTTGAAGAAAGATA+TGG | + | chr8.3:21134604-21134623 | MS.gene72349:CDS | 25.0% |
! | CAATTATCTCCATTAACAAA+TGG | - | chr8.3:21134162-21134181 | None:intergenic | 25.0% |
! | GCAGTGGTAAAAAATATATT+TGG | - | chr8.3:21133542-21133561 | None:intergenic | 25.0% |
! | GGAATCCAAAATAATATCAA+TGG | + | chr8.3:21133280-21133299 | MS.gene72349:CDS | 25.0% |
! | GTTAATGGAGATAATTGAAT+CGG | + | chr8.3:21134165-21134184 | MS.gene72349:CDS | 25.0% |
! | TAAACAAACAATGTCATGTA+TGG | - | chr8.3:21132640-21132659 | None:intergenic | 25.0% |
! | TCACTTATTTCCACATAATT+TGG | - | chr8.3:21131949-21131968 | None:intergenic | 25.0% |
!! | AAAAATATATTTGGTTGGTG+CGG | - | chr8.3:21133533-21133552 | None:intergenic | 25.0% |
!! | AAAATGATTTTGTAGGTCAT+TGG | + | chr8.3:21133076-21133095 | MS.gene72349:intron | 25.0% |
!! | ATTTACTAATCAGGATGTTT+TGG | - | chr8.3:21132569-21132588 | None:intergenic | 25.0% |
!! | CATTCCCATTGATATTATTT+TGG | - | chr8.3:21133288-21133307 | None:intergenic | 25.0% |
!! | TAATCTAAAGTGTCATTACA+TGG | - | chr8.3:21133584-21133603 | None:intergenic | 25.0% |
!! | TTTTCTTTTGCTTACATGAA+GGG | + | chr8.3:21132769-21132788 | MS.gene72349:intron | 25.0% |
!! | TTTTTCTTTTGCTTACATGA+AGG | + | chr8.3:21132768-21132787 | MS.gene72349:intron | 25.0% |
!!! | CAACTATTTTGTTTTGGTTA+TGG | + | chr8.3:21133956-21133975 | MS.gene72349:intron | 25.0% |
!!! | CTTTAGATTAAAAGAGTATC+GGG | + | chr8.3:21133594-21133613 | MS.gene72349:intron | 25.0% |
!!! | CTTTTCATTTTTATACTGCA+GGG | + | chr8.3:21132829-21132848 | MS.gene72349:intron | 25.0% |
!!! | GTTGAAAAAGTATCAACAAT+TGG | - | chr8.3:21133940-21133959 | None:intergenic | 25.0% |
!!! | TCTTTTCATTTTTATACTGC+AGG | + | chr8.3:21132828-21132847 | MS.gene72349:intron | 25.0% |
!!! | TGCATATCACATTTTGAAAA+TGG | - | chr8.3:21134259-21134278 | None:intergenic | 25.0% |
AATTGCTTAGATCAAATCTG+AGG | + | chr8.3:21133827-21133846 | MS.gene72349:intron | 30.0% | |
ACCTGAAATAGGTAATTTCT+GGG | + | chr8.3:21132065-21132084 | MS.gene72349:CDS | 30.0% | |
ATAAAAAAACCATCCTAGCA+TGG | + | chr8.3:21132337-21132356 | MS.gene72349:CDS | 30.0% | |
ATACAACATGCATGAGATAT+AGG | - | chr8.3:21134208-21134227 | None:intergenic | 30.0% | |
ATTAAGCAAAAGACTTCTAC+TGG | + | chr8.3:21134664-21134683 | MS.gene72349:CDS | 30.0% | |
CTTTCAACCATTTACTAATC+AGG | - | chr8.3:21132578-21132597 | None:intergenic | 30.0% | |
GAAAGTGAGTCAAATATTGA+AGG | + | chr8.3:21131979-21131998 | MS.gene72349:CDS | 30.0% | |
GATTAGTAAATGGTTGAAAG+AGG | + | chr8.3:21132578-21132597 | MS.gene72349:CDS | 30.0% | |
GCAAAAATATAACTTCAGTG+AGG | + | chr8.3:21134574-21134593 | MS.gene72349:CDS | 30.0% | |
TAAACTACTTCAGTGAGTTA+TGG | - | chr8.3:21133055-21133074 | None:intergenic | 30.0% | |
TCAACAAACAAGTCATAATC+TGG | + | chr8.3:21132239-21132258 | MS.gene72349:CDS | 30.0% | |
TTGAAATATCAGATGATGAC+CGG | - | chr8.3:21132985-21133004 | None:intergenic | 30.0% | |
! | AAATTACCTATTTCAGGTCT+TGG | - | chr8.3:21132063-21132082 | None:intergenic | 30.0% |
! | ACGAATTTGCCATTTGTTAA+TGG | + | chr8.3:21134150-21134169 | MS.gene72349:CDS | 30.0% |
!! | GACATTGTTTGTTTAGTTTG+TGG | + | chr8.3:21132645-21132664 | MS.gene72349:CDS | 30.0% |
!! | GTTTGTTTAGTTTGTGGAAA+AGG | + | chr8.3:21132651-21132670 | MS.gene72349:CDS | 30.0% |
!!! | GTATGCATTCATTTTTTCTG+TGG | + | chr8.3:21133162-21133181 | MS.gene72349:intron | 30.0% |
AAGAGGATGAACAAAAACGT+CGG | + | chr8.3:21132595-21132614 | MS.gene72349:CDS | 35.0% | |
AAGTTCAATGGAAAAGTGGA+AGG | - | chr8.3:21134370-21134389 | None:intergenic | 35.0% | |
ACATATCTCTCTCTTCTACA+AGG | - | chr8.3:21134337-21134356 | None:intergenic | 35.0% | |
ACTTGCAAGGAAATTGATGA+AGG | + | chr8.3:21132366-21132385 | MS.gene72349:CDS | 35.0% | |
AGTTATGGTCATGACAACAA+AGG | - | chr8.3:21133040-21133059 | None:intergenic | 35.0% | |
ATAGTGAGTGATAAATGCAG+TGG | - | chr8.3:21133558-21133577 | None:intergenic | 35.0% | |
ATGATAACAGACACACATAC+TGG | + | chr8.3:21133421-21133440 | MS.gene72349:CDS | 35.0% | |
CTTGACTCTACAGATTTCAT+GGG | + | chr8.3:21134074-21134093 | MS.gene72349:intron | 35.0% | |
CTTGCAAGGAAATTGATGAA+GGG | + | chr8.3:21132367-21132386 | MS.gene72349:CDS | 35.0% | |
CTTGTTTCGTTCATTGATGA+TGG | - | chr8.3:21132213-21132232 | None:intergenic | 35.0% | |
GACCTGAAATAGGTAATTTC+TGG | + | chr8.3:21132064-21132083 | MS.gene72349:CDS | 35.0% | |
GAGAAATTGAAGGGATCAAT+CGG | + | chr8.3:21133259-21133278 | MS.gene72349:CDS | 35.0% | |
GCATACCTCTTTACAACTTA+CGG | - | chr8.3:21133148-21133167 | None:intergenic | 35.0% | |
TCCCAGAAATTACCTATTTC+AGG | - | chr8.3:21132069-21132088 | None:intergenic | 35.0% | |
TGAAATAGCTACCATTGTTC+CGG | + | chr8.3:21132143-21132162 | MS.gene72349:CDS | 35.0% | |
TGCAAGTGCAAATACTGTAA+GGG | + | chr8.3:21132892-21132911 | MS.gene72349:CDS | 35.0% | |
TGCAGTAAGAACATAACCAA+TGG | - | chr8.3:21132876-21132895 | None:intergenic | 35.0% | |
TGGAAAGAAGACATACCTTA+CGG | - | chr8.3:21133920-21133939 | None:intergenic | 35.0% | |
TTCGAAGTCTTGAAGTTGAA+AGG | + | chr8.3:21134510-21134529 | MS.gene72349:CDS | 35.0% | |
TTGAAAATTCGACCGGTTAT+CGG | - | chr8.3:21132423-21132442 | None:intergenic | 35.0% | |
TTGTTCCGTAAGTTGTAAAG+AGG | + | chr8.3:21133140-21133159 | MS.gene72349:CDS | 35.0% | |
TTTGCTTAATCGTATAGCTC+CGG | - | chr8.3:21134654-21134673 | None:intergenic | 35.0% | |
! | ATAACCGGTCGAATTTTCAA+TGG | + | chr8.3:21132423-21132442 | MS.gene72349:CDS | 35.0% |
! | CCTGTATAAAAGCACAAGAA+CGG | - | chr8.3:21132728-21132747 | None:intergenic | 35.0% |
! | TATAACCTTTTGATGTTCCC+CGG | + | chr8.3:21134632-21134651 | MS.gene72349:CDS | 35.0% |
! | TATACTGCAGGGTTTTTCTA+AGG | + | chr8.3:21132840-21132859 | MS.gene72349:intron | 35.0% |
!! | AATTAAGAAGTGCTTACCTG+CGG | - | chr8.3:21133477-21133496 | None:intergenic | 35.0% |
!! | AGTTTGTGGATTAGATGGAA+TGG | - | chr8.3:21134540-21134559 | None:intergenic | 35.0% |
!! | ATGTTGATGGAAGAAGCTTT+TGG | + | chr8.3:21133397-21133416 | MS.gene72349:CDS | 35.0% |
!! | TACTAATCAGGATGTTTTGG+AGG | - | chr8.3:21132566-21132585 | None:intergenic | 35.0% |
!! | TGTTGATGGAAGAAGCTTTT+GGG | + | chr8.3:21133398-21133417 | MS.gene72349:CDS | 35.0% |
AACTGAAACACCTCCATCAT+CGG | + | chr8.3:21132116-21132135 | MS.gene72349:CDS | 40.0% | |
AATACTCGTTTCCGGAACAA+TGG | - | chr8.3:21132157-21132176 | None:intergenic | 40.0% | |
ACAAATGGATACGAGAAGTG+AGG | + | chr8.3:21133333-21133352 | MS.gene72349:CDS | 40.0% | |
ACGCACAAGACCAAATTATG+TGG | + | chr8.3:21131936-21131955 | MS.gene72349:CDS | 40.0% | |
AGAGGATGAACAAAAACGTC+GGG | + | chr8.3:21132596-21132615 | MS.gene72349:CDS | 40.0% | |
ATCCACAAACTGCTGAAATG+TGG | + | chr8.3:21134549-21134568 | MS.gene72349:CDS | 40.0% | |
ATGGGAATGAGAGCTATTCT+TGG | + | chr8.3:21133299-21133318 | MS.gene72349:CDS | 40.0% | |
CACTTCTCGTATCCATTTGT+TGG | - | chr8.3:21133333-21133352 | None:intergenic | 40.0% | |
CCATGAAATCTGTAGAGTCA+AGG | - | chr8.3:21134076-21134095 | None:intergenic | 40.0% | |
CCTTGACTCTACAGATTTCA+TGG | + | chr8.3:21134073-21134092 | MS.gene72349:intron | 40.0% | |
CTAAGGAAAACGACAACCAT+TGG | + | chr8.3:21132857-21132876 | MS.gene72349:CDS | 40.0% | |
CTGCAAGTGCAAATACTGTA+AGG | + | chr8.3:21132891-21132910 | MS.gene72349:CDS | 40.0% | |
GCAACCATACAAACGCATTT+CGG | + | chr8.3:21132521-21132540 | MS.gene72349:CDS | 40.0% | |
GTGGAAAAGGAGAAGATGAA+GGG | + | chr8.3:21132664-21132683 | MS.gene72349:CDS | 40.0% | |
TATGGTCATGACAACAAAGG+AGG | - | chr8.3:21133037-21133056 | None:intergenic | 40.0% | |
TCCATTGGCAAACTTTGTTC+CGG | - | chr8.3:21132183-21132202 | None:intergenic | 40.0% | |
TCCGGAAACGAGTATTAATC+CGG | + | chr8.3:21132161-21132180 | MS.gene72349:CDS | 40.0% | |
TCCGGATTAATACTCGTTTC+CGG | - | chr8.3:21132165-21132184 | None:intergenic | 40.0% | |
TGAAGGGTTAGAAGCAAACT+GGG | + | chr8.3:21131996-21132015 | MS.gene72349:CDS | 40.0% | |
TGCTTAGATCAAATCTGAGG+AGG | + | chr8.3:21133830-21133849 | MS.gene72349:intron | 40.0% | |
TGGAAAAGGAGAAGATGAAG+GGG | + | chr8.3:21132665-21132684 | MS.gene72349:CDS | 40.0% | |
TGTGGAAAAGGAGAAGATGA+AGG | + | chr8.3:21132663-21132682 | MS.gene72349:CDS | 40.0% | |
TTCCACATTTCAGCAGTTTG+TGG | - | chr8.3:21134554-21134573 | None:intergenic | 40.0% | |
TTGAAGGGTTAGAAGCAAAC+TGG | + | chr8.3:21131995-21132014 | MS.gene72349:CDS | 40.0% | |
TTGCTTAATCGTATAGCTCC+GGG | - | chr8.3:21134653-21134672 | None:intergenic | 40.0% | |
! | ACTTACACTGCTTGTTGCAT+TGG | - | chr8.3:21132957-21132976 | None:intergenic | 40.0% |
! | ATTTCATTCACCGATGATGG+AGG | - | chr8.3:21132129-21132148 | None:intergenic | 40.0% |
! | CAAGCAGTGTAAGTTTTCTC+CGG | + | chr8.3:21132963-21132982 | MS.gene72349:intron | 40.0% |
! | CCGTTCTTGTGCTTTTATAC+AGG | + | chr8.3:21132725-21132744 | MS.gene72349:CDS | 40.0% |
! | GCTATTTCATTCACCGATGA+TGG | - | chr8.3:21132132-21132151 | None:intergenic | 40.0% |
! | TTCTCGTATCCATTTGTTGG+AGG | - | chr8.3:21133330-21133349 | None:intergenic | 40.0% |
!! | CTCTTCTACAAGGAGTGTTA+TGG | - | chr8.3:21134327-21134346 | None:intergenic | 40.0% |
!! | GATGATGGAACTGTTTCCAT+TGG | - | chr8.3:21132198-21132217 | None:intergenic | 40.0% |
!! | TCAGCAGTTTGTGGATTAGA+TGG | - | chr8.3:21134545-21134564 | None:intergenic | 40.0% |
!!! | AATCAGGATGTTTTGGAGGA+AGG | - | chr8.3:21132562-21132581 | None:intergenic | 40.0% |
ACAAGAACGGTGATAAGTGG+AGG | - | chr8.3:21132715-21132734 | None:intergenic | 45.0% | |
ACCATACAAACGCATTTCGG+TGG | + | chr8.3:21132524-21132543 | MS.gene72349:CDS | 45.0% | |
AGAAGAAACTCCAAGCGCAA+CGG | + | chr8.3:21132278-21132297 | MS.gene72349:CDS | 45.0% | |
AGCACAAGAACGGTGATAAG+TGG | - | chr8.3:21132718-21132737 | None:intergenic | 45.0% | |
AGCATGGTTGACAACTTGCA+AGG | + | chr8.3:21132353-21132372 | MS.gene72349:CDS | 45.0% | |
AGTTGTCAACCATGCTAGGA+TGG | - | chr8.3:21132349-21132368 | None:intergenic | 45.0% | |
CAAGAACGGTGATAAGTGGA+GGG | - | chr8.3:21132714-21132733 | None:intergenic | 45.0% | |
CGTAGACCAAGACCTGAAAT+AGG | + | chr8.3:21132054-21132073 | MS.gene72349:CDS | 45.0% | |
CTGGACTTGAATGAGCCATT+CGG | + | chr8.3:21134683-21134702 | MS.gene72349:CDS | 45.0% | |
GAAGCAAACTGGGAAAAACC+AGG | + | chr8.3:21132006-21132025 | MS.gene72349:CDS | 45.0% | |
GATGGGGAAAAACCGATAAC+CGG | + | chr8.3:21132408-21132427 | MS.gene72349:CDS | 45.0% | |
GGAAAAGGAGAAGATGAAGG+GGG | + | chr8.3:21132666-21132685 | MS.gene72349:CDS | 45.0% | |
GGCTCCATTGAAAATTCGAC+CGG | - | chr8.3:21132430-21132449 | None:intergenic | 45.0% | |
GTATCGGGTGTCTAACAAAG+TGG | + | chr8.3:21133609-21133628 | MS.gene72349:intron | 45.0% | |
GTCGCAACAGCTACATAAGA+TGG | - | chr8.3:21132451-21132470 | None:intergenic | 45.0% | |
TAATTGCTGCAGCTACCGTA+AGG | + | chr8.3:21133902-21133921 | MS.gene72349:CDS | 45.0% | |
TCATGACAACAAAGGAGGTG+AGG | - | chr8.3:21133032-21133051 | None:intergenic | 45.0% | |
TCCGGAACAAAGTTTGCCAA+TGG | + | chr8.3:21132179-21132198 | MS.gene72349:CDS | 45.0% | |
TGCAAGTTGTCAACCATGCT+AGG | - | chr8.3:21132353-21132372 | None:intergenic | 45.0% | |
TGCTTAATCGTATAGCTCCG+GGG | - | chr8.3:21134652-21134671 | None:intergenic | 45.0% | |
TGGACTTGAATGAGCCATTC+GGG | + | chr8.3:21134684-21134703 | MS.gene72349:CDS | 45.0% | |
TTGGAGAGTCCTCCAACAAA+TGG | + | chr8.3:21133318-21133337 | MS.gene72349:CDS | 45.0% | |
! | AGAGTGTTCTATACAACCGC+AGG | + | chr8.3:21133458-21133477 | MS.gene72349:CDS | 45.0% |
! | CTGTAAGGGTGATGATGAAG+AGG | + | chr8.3:21132906-21132925 | MS.gene72349:CDS | 45.0% |
! | TACACTGCTTGTTGCATTGG+CGG | - | chr8.3:21132954-21132973 | None:intergenic | 45.0% |
AACGCATTTCGGTGGCAAAG+CGG | + | chr8.3:21132532-21132551 | MS.gene72349:CDS | 50.0% | |
ACCGAGGTGCGTTATCATGA+TGG | + | chr8.3:21132390-21132409 | MS.gene72349:CDS | 50.0% | |
CACACATACTGGCGTCAATG+TGG | + | chr8.3:21133432-21133451 | MS.gene72349:CDS | 50.0% | |
CCGAGGTGCGTTATCATGAT+GGG | + | chr8.3:21132391-21132410 | MS.gene72349:CDS | 50.0% | |
CGAGGTGCGTTATCATGATG+GGG | + | chr8.3:21132392-21132411 | MS.gene72349:CDS | 50.0% | |
CTTATGTAGCTGTTGCGACG+AGG | + | chr8.3:21132452-21132471 | MS.gene72349:CDS | 50.0% | |
GCCACCGAAATGCGTTTGTA+TGG | - | chr8.3:21132528-21132547 | None:intergenic | 50.0% | |
GCCTCATCTGTGGCAATGAA+AGG | - | chr8.3:21134118-21134137 | None:intergenic | 50.0% | |
GCCTTTCATTGCCACAGATG+AGG | + | chr8.3:21134114-21134133 | MS.gene72349:CDS | 50.0% | |
GCGACGAGGAAATCTCTGTA+TGG | + | chr8.3:21132466-21132485 | MS.gene72349:CDS | 50.0% | |
GGAAATTGATGAAGGGACCG+AGG | + | chr8.3:21132374-21132393 | MS.gene72349:CDS | 50.0% | |
GGACTTGAATGAGCCATTCG+GGG | + | chr8.3:21134685-21134704 | MS.gene72349:CDS | 50.0% | |
TAGCTCCGGGGAACATCAAA+AGG | - | chr8.3:21134640-21134659 | None:intergenic | 50.0% | |
TCGGGTGTCTAACAAAGTGG+AGG | + | chr8.3:21133612-21133631 | MS.gene72349:intron | 50.0% | |
TGACAACAAAGGAGGTGAGG+TGG | - | chr8.3:21133029-21133048 | None:intergenic | 50.0% | |
TGCAGCTGCTTGCATGTTGA+TGG | + | chr8.3:21133384-21133403 | MS.gene72349:CDS | 50.0% | |
TGGCGGCACATGATGTCTAA+AGG | - | chr8.3:21132937-21132956 | None:intergenic | 50.0% | |
TTAGGCTCAACATCCCCGAA+TGG | - | chr8.3:21134701-21134720 | None:intergenic | 50.0% | |
! | CCCATCATGATAACGCACCT+CGG | - | chr8.3:21132394-21132413 | None:intergenic | 50.0% |
AGAAACTCCAAGCGCAACGG+CGG | + | chr8.3:21132281-21132300 | MS.gene72349:CDS | 55.0% | |
AGGAGGTGAGGTGGATGAGT+AGG | - | chr8.3:21133020-21133039 | None:intergenic | 55.0% | |
GCCACAGATGAGGCATACAG+AGG | + | chr8.3:21134124-21134143 | MS.gene72349:CDS | 55.0% | |
GCCTCTGTATGCCTCATCTG+TGG | - | chr8.3:21134128-21134147 | None:intergenic | 55.0% | |
GGAGGTGAGGTGGATGAGTA+GGG | - | chr8.3:21133019-21133038 | None:intergenic | 55.0% | |
TGGGAAAAACCAGGTCGACG+AGG | + | chr8.3:21132015-21132034 | MS.gene72349:CDS | 55.0% | |
AAACTCCAAGCGCAACGGCG+GGG | + | chr8.3:21132283-21132302 | MS.gene72349:CDS | 60.0% | |
AACCAGGTCGACGAGGTCGA+CGG | + | chr8.3:21132022-21132041 | MS.gene72349:CDS | 60.0% | |
GAAACTCCAAGCGCAACGGC+GGG | + | chr8.3:21132282-21132301 | MS.gene72349:CDS | 60.0% | |
GAAGTCCCCGCCGTTGCGCT+TGG | - | chr8.3:21132291-21132310 | None:intergenic | 70.0% | |
GACCGTCGACCTCGTCGACC+TGG | - | chr8.3:21132027-21132046 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 21131916 | 21134733 | 21131916 | ID=MS.gene72349 |
chr8.3 | mRNA | 21131916 | 21134733 | 21131916 | ID=MS.gene72349.t1;Parent=MS.gene72349 |
chr8.3 | exon | 21131916 | 21132746 | 21131916 | ID=MS.gene72349.t1.exon1;Parent=MS.gene72349.t1 |
chr8.3 | CDS | 21131916 | 21132746 | 21131916 | ID=cds.MS.gene72349.t1;Parent=MS.gene72349.t1 |
chr8.3 | exon | 21132850 | 21132970 | 21132850 | ID=MS.gene72349.t1.exon2;Parent=MS.gene72349.t1 |
chr8.3 | CDS | 21132850 | 21132970 | 21132850 | ID=cds.MS.gene72349.t1;Parent=MS.gene72349.t1 |
chr8.3 | exon | 21133091 | 21133161 | 21133091 | ID=MS.gene72349.t1.exon3;Parent=MS.gene72349.t1 |
chr8.3 | CDS | 21133091 | 21133161 | 21133091 | ID=cds.MS.gene72349.t1;Parent=MS.gene72349.t1 |
chr8.3 | exon | 21133253 | 21133479 | 21133253 | ID=MS.gene72349.t1.exon4;Parent=MS.gene72349.t1 |
chr8.3 | CDS | 21133253 | 21133479 | 21133253 | ID=cds.MS.gene72349.t1;Parent=MS.gene72349.t1 |
chr8.3 | exon | 21133837 | 21133923 | 21133837 | ID=MS.gene72349.t1.exon5;Parent=MS.gene72349.t1 |
chr8.3 | CDS | 21133837 | 21133923 | 21133837 | ID=cds.MS.gene72349.t1;Parent=MS.gene72349.t1 |
chr8.3 | exon | 21134087 | 21134186 | 21134087 | ID=MS.gene72349.t1.exon6;Parent=MS.gene72349.t1 |
chr8.3 | CDS | 21134087 | 21134186 | 21134087 | ID=cds.MS.gene72349.t1;Parent=MS.gene72349.t1 |
chr8.3 | exon | 21134506 | 21134733 | 21134506 | ID=MS.gene72349.t1.exon7;Parent=MS.gene72349.t1 |
chr8.3 | CDS | 21134506 | 21134733 | 21134506 | ID=cds.MS.gene72349.t1;Parent=MS.gene72349.t1 |
Gene Sequence |
Protein sequence |