Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72414.t1 | XP_013468061.1 | 90.8 | 1025 | 87 | 2 | 1 | 1024 | 1 | 1019 | 0.00E+00 | 1714.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72414.t1 | Q0WPF2 | 25.5 | 955 | 486 | 23 | 66 | 1011 | 50 | 788 | 3.2e-62 | 241.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72414.t1 | A0A072VKY7 | 90.8 | 1025 | 87 | 2 | 1 | 1024 | 1 | 1019 | 0.0e+00 | 1714.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene72414.t1 | TF | C2H2 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72414.t1 | MTR_1g061130 | 92.878 | 1025 | 66 | 2 | 1 | 1024 | 1 | 1019 | 0.0 | 1916 |
MS.gene72414.t1 | MTR_1g061130 | 93.060 | 1023 | 64 | 2 | 1 | 1022 | 1 | 1017 | 0.0 | 1916 |
MS.gene72414.t1 | MTR_7g103840 | 55.492 | 1047 | 414 | 20 | 1 | 1021 | 1 | 1021 | 0.0 | 1058 |
MS.gene72414.t1 | MTR_7g103840 | 55.333 | 1050 | 417 | 20 | 1 | 1024 | 3 | 1026 | 0.0 | 1057 |
MS.gene72414.t1 | MTR_6g011450 | 36.842 | 361 | 202 | 10 | 79 | 418 | 40 | 395 | 2.77e-55 | 207 |
MS.gene72414.t1 | MTR_6g011450 | 34.239 | 184 | 115 | 4 | 843 | 1024 | 645 | 824 | 1.30e-25 | 114 |
MS.gene72414.t1 | MTR_4g073340 | 34.054 | 185 | 114 | 4 | 843 | 1024 | 326 | 505 | 5.09e-27 | 117 |
MS.gene72414.t1 | MTR_6g011450 | 34.239 | 184 | 115 | 4 | 843 | 1024 | 507 | 686 | 4.03e-26 | 115 |
MS.gene72414.t1 | MTR_6g011450 | 29.008 | 262 | 160 | 10 | 178 | 418 | 1 | 257 | 3.87e-16 | 84.0 |
MS.gene72414.t1 | MTR_6g011470 | 33.793 | 145 | 90 | 4 | 871 | 1013 | 70 | 210 | 1.02e-18 | 86.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72414.t1 | AT2G36480 | 43.962 | 530 | 263 | 14 | 1 | 508 | 1 | 518 | 1.10e-109 | 364 |
MS.gene72414.t1 | AT2G36480 | 39.362 | 282 | 142 | 8 | 746 | 1020 | 692 | 951 | 2.02e-44 | 175 |
MS.gene72414.t1 | AT2G36480 | 43.962 | 530 | 263 | 14 | 1 | 508 | 1 | 518 | 1.10e-109 | 364 |
MS.gene72414.t1 | AT2G36480 | 39.362 | 282 | 142 | 8 | 746 | 1020 | 692 | 951 | 2.02e-44 | 175 |
MS.gene72414.t1 | AT4G04885 | 37.151 | 358 | 167 | 9 | 66 | 408 | 50 | 364 | 1.27e-56 | 211 |
MS.gene72414.t1 | AT4G04885 | 36.095 | 169 | 100 | 4 | 846 | 1011 | 625 | 788 | 7.33e-30 | 128 |
MS.gene72414.t1 | AT1G66500 | 32.955 | 176 | 94 | 4 | 846 | 1012 | 227 | 387 | 2.38e-22 | 101 |
MS.gene72414.t1 | AT5G43620 | 31.319 | 182 | 94 | 4 | 846 | 1014 | 220 | 383 | 2.74e-22 | 101 |
Find 239 sgRNAs with CRISPR-Local
Find 437 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCCAATCTTTCAAGGAATT+TGG | 0.085184 | 1.4:-50347417 | MS.gene72414:CDS |
GTTCTTGGAATTTAAGTTTA+AGG | 0.148675 | 1.4:+50345355 | None:intergenic |
AAAGCTGCTGCTGGTGTTTC+AGG | 0.159571 | 1.4:-50347332 | MS.gene72414:CDS |
GACAGTATTGTTAAGAATAT+TGG | 0.166316 | 1.4:-50348731 | MS.gene72414:CDS |
CGCTGATATCGATACTGATA+TGG | 0.205339 | 1.4:-50345028 | MS.gene72414:CDS |
GTGGGATCTGAATCCCCTTC+TGG | 0.207573 | 1.4:-50346383 | MS.gene72414:CDS |
TTGCAACTAATGAGCTTAAA+AGG | 0.210514 | 1.4:+50345703 | None:intergenic |
AGTAGTCTTCCATCTCTATT+AGG | 0.214558 | 1.4:-50345945 | MS.gene72414:CDS |
GGAATCAAAGATGTGATTTC+TGG | 0.234527 | 1.4:-50345006 | MS.gene72414:CDS |
CAAAGAAAACAAGTGAATTC+TGG | 0.236210 | 1.4:-50350491 | MS.gene72414:CDS |
GGTGTTTCAGGGACCATATC+TGG | 0.243852 | 1.4:-50347320 | MS.gene72414:CDS |
AGTGTCTGTTAAACTGTTCT+TGG | 0.244349 | 1.4:+50345340 | None:intergenic |
GGACACTGATGAAATTATTT+TGG | 0.257498 | 1.4:+50345887 | None:intergenic |
GACTTGGAAAGCAGTGATTT+TGG | 0.272931 | 1.4:-50350422 | MS.gene72414:CDS |
TTCAGTGGCTTGAGATCTAT+TGG | 0.278429 | 1.4:+50346637 | None:intergenic |
GACCGCTGATGATGAGAATT+TGG | 0.297127 | 1.4:-50347093 | MS.gene72414:intron |
AGGAATTTGGGCATGGGTAT+TGG | 0.301723 | 1.4:-50347404 | MS.gene72414:CDS |
ACAGTATTGTTAAGAATATT+GGG | 0.313571 | 1.4:-50348730 | MS.gene72414:CDS |
CTTTCCTCCTCAGACCCTTC+AGG | 0.314019 | 1.4:-50348396 | MS.gene72414:CDS |
TCCAATCTTTCAAGGAATTT+GGG | 0.315442 | 1.4:-50347416 | MS.gene72414:CDS |
ATGCCTGTTGCTTCATTGTC+TGG | 0.317207 | 1.4:-50345579 | MS.gene72414:CDS |
GTAGTCTTCCATCTCTATTA+GGG | 0.321687 | 1.4:-50345944 | MS.gene72414:CDS |
GCCAATCCTATTCTTGCATT+TGG | 0.325758 | 1.4:+50346434 | None:intergenic |
ATCCGGATCTTTGATCAATC+TGG | 0.330677 | 1.4:+50350547 | None:intergenic |
AAGTCTCCAACATGAATATT+AGG | 0.333357 | 1.4:+50346197 | None:intergenic |
ATATCTAACCTCGGGTAGTT+TGG | 0.339649 | 1.4:+50348682 | None:intergenic |
GCCCAAATTCCTTGAAAGAT+TGG | 0.345563 | 1.4:+50347415 | None:intergenic |
TGAGATGACTGATAAAGATT+TGG | 0.348285 | 1.4:-50347650 | MS.gene72414:CDS |
TCTAACTCGTCTTTGGTAGA+AGG | 0.352318 | 1.4:+50345537 | None:intergenic |
TGGGATCTGAATCCCCTTCT+GGG | 0.357721 | 1.4:-50346382 | MS.gene72414:CDS |
CCACATCATTGCAGCATTTG+CGG | 0.362338 | 1.4:-50345378 | MS.gene72414:CDS |
ACTATTTCTTTGCCCAGATA+TGG | 0.362862 | 1.4:+50347307 | None:intergenic |
GAGAAGAATCTTTATTATAT+TGG | 0.362980 | 1.4:+50346231 | None:intergenic |
GATTGGTGGCACCCGATGAC+TGG | 0.365134 | 1.4:+50345748 | None:intergenic |
AAGTCAAGTGACTGGGTTGC+TGG | 0.373212 | 1.4:-50345252 | MS.gene72414:CDS |
ATCATTATCATGGCAATTGC+AGG | 0.373724 | 1.4:-50346582 | MS.gene72414:CDS |
TCAGGTTATTGACAAGGAAC+TGG | 0.376586 | 1.4:-50348378 | MS.gene72414:CDS |
ACGCTGTCTTTCAAAATACT+TGG | 0.382404 | 1.4:+50348259 | None:intergenic |
ATTGGTCGAGCACTCGAATT+CGG | 0.382878 | 1.4:+50350518 | None:intergenic |
CAAATTTCTGTGTCCTAACT+TGG | 0.383103 | 1.4:+50347361 | None:intergenic |
TGCACCTTTCTGATTACATT+AGG | 0.383627 | 1.4:+50345435 | None:intergenic |
ATCTCAGGCGGCACCTCGGC+TGG | 0.389282 | 1.4:+50345651 | None:intergenic |
ACCATGTTCATTGTCTTCAT+AGG | 0.395951 | 1.4:+50347439 | None:intergenic |
GATGGTAGAGTGGCCAAGTT+AGG | 0.396559 | 1.4:-50347374 | MS.gene72414:CDS |
AGTATCATCTAACTCGTCTT+TGG | 0.397170 | 1.4:+50345530 | None:intergenic |
GGTTGTCCAGCCTTTCTTTG+AGG | 0.399183 | 1.4:+50345825 | None:intergenic |
AAAGAAAACAAGTGAATTCT+GGG | 0.401590 | 1.4:-50350490 | MS.gene72414:CDS |
GCCGATTCGCTTTGAGGACC+TGG | 0.403035 | 1.4:-50350381 | MS.gene72414:CDS |
GCCGCAGCCGATTCGCTTTG+AGG | 0.403174 | 1.4:-50350387 | MS.gene72414:CDS |
TTCCTTCCAAATGCAAGAAT+AGG | 0.407550 | 1.4:-50346440 | MS.gene72414:CDS |
CTCGAATTCGGAGCATGATC+CGG | 0.407980 | 1.4:+50350530 | None:intergenic |
CTTAGTTGTTGCTGATACCT+TGG | 0.408166 | 1.4:+50346116 | None:intergenic |
CAGCCAACACGAAACATAAC+TGG | 0.409010 | 1.4:-50347239 | MS.gene72414:CDS |
ACCAACTTGACTATAATTGC+AGG | 0.409059 | 1.4:-50350302 | MS.gene72414:CDS |
TTCCATCTCTATTAGGGGCT+CGG | 0.412078 | 1.4:-50345938 | MS.gene72414:CDS |
AGCGCCTCAGCCCAGTCATC+GGG | 0.412522 | 1.4:-50345759 | MS.gene72414:CDS |
TCCAATCGACTCAGCATCTC+AGG | 0.413940 | 1.4:+50345636 | None:intergenic |
TGATGAGTTGGATAGGAAAC+CGG | 0.415482 | 1.4:-50346546 | MS.gene72414:CDS |
TCAGTGGCTTGAGATCTATT+GGG | 0.416069 | 1.4:+50346638 | None:intergenic |
AGCGTCTTCAGCAGTCCAGC+AGG | 0.419580 | 1.4:-50348241 | MS.gene72414:CDS |
ATAGTGAATGGATGTTCAAA+GGG | 0.422995 | 1.4:-50345068 | MS.gene72414:CDS |
CAAGTTGGTAATCATCGGTT+TGG | 0.431848 | 1.4:+50350316 | None:intergenic |
GAAATGAACGCGGGATTGAC+TGG | 0.432424 | 1.4:-50347152 | MS.gene72414:CDS |
TTCTGCAAAGCAGGTGAAGA+TGG | 0.433922 | 1.4:+50345852 | None:intergenic |
AAAGATGTTTCATACTTTGA+CGG | 0.440930 | 1.4:+50348438 | None:intergenic |
AACATGAATATTAGGAGAAA+GGG | 0.444732 | 1.4:+50346205 | None:intergenic |
AATCTGGGTCTCTTCAAAAT+CGG | 0.445824 | 1.4:+50350563 | None:intergenic |
CGCTGTCTTTCAAAATACTT+GGG | 0.448714 | 1.4:+50348260 | None:intergenic |
CTCCCATCTTATGAAAACTT+TGG | 0.450552 | 1.4:-50346312 | MS.gene72414:CDS |
AGCATCATCCATCATTATCA+TGG | 0.450859 | 1.4:-50346592 | MS.gene72414:CDS |
AATAGGATTGGCAGAAATTG+AGG | 0.452810 | 1.4:-50346423 | MS.gene72414:CDS |
CTTTCTCCTAATATTCATGT+TGG | 0.453208 | 1.4:-50346203 | MS.gene72414:CDS |
CAACATGAATATTAGGAGAA+AGG | 0.454790 | 1.4:+50346204 | None:intergenic |
ATGCAAGTTCTTCTGCTGTC+AGG | 0.455275 | 1.4:-50346478 | MS.gene72414:CDS |
GGCAGTCACCTTTGCGACAT+CGG | 0.457129 | 1.4:-50346361 | MS.gene72414:CDS |
ACAGATATTAGAAATGTCAT+TGG | 0.457683 | 1.4:-50345471 | MS.gene72414:CDS |
AAGCTGCTGCTGGTGTTTCA+GGG | 0.459180 | 1.4:-50347331 | MS.gene72414:CDS |
CAGCGCCTCAGCCCAGTCAT+CGG | 0.459411 | 1.4:-50345760 | MS.gene72414:CDS |
CTGCTAACATTCGAGGAAGT+TGG | 0.464421 | 1.4:+50345780 | None:intergenic |
GACATTTCTAATATCTGTGC+TGG | 0.464976 | 1.4:+50345476 | None:intergenic |
GGGGCTCGGCCTTCTCAGTC+AGG | 0.465477 | 1.4:-50345924 | MS.gene72414:CDS |
AGTGCATTCTCTTTCTCTTG+TGG | 0.468182 | 1.4:+50345305 | None:intergenic |
GAAATGTGATATCAAGTAGC+TGG | 0.469304 | 1.4:-50347208 | MS.gene72414:CDS |
GAGATGACTGATAAAGATTT+GGG | 0.474125 | 1.4:-50347649 | MS.gene72414:CDS |
AACATGGTTCCAATCTTTCA+AGG | 0.475269 | 1.4:-50347424 | MS.gene72414:CDS |
GATGGATCTATGTTAATGTC+TGG | 0.475728 | 1.4:-50346515 | MS.gene72414:CDS |
GAACCAGACAATGAAGCAAC+AGG | 0.476383 | 1.4:+50345576 | None:intergenic |
TTTAAGCTCATTAGTTGCAA+AGG | 0.477588 | 1.4:-50345700 | MS.gene72414:CDS |
AGTTCTTCTGCTGTCAGGAT+GGG | 0.481004 | 1.4:-50346473 | MS.gene72414:CDS |
ACCCAGATTGATCAAAGATC+CGG | 0.482655 | 1.4:-50350549 | MS.gene72414:CDS |
AATAGTGAATGGATGTTCAA+AGG | 0.486331 | 1.4:-50345069 | MS.gene72414:CDS |
TTAAGCTCATTAGTTGCAAA+GGG | 0.488085 | 1.4:-50345699 | MS.gene72414:CDS |
ATTCTGCAAGGCATACAAAC+AGG | 0.488308 | 1.4:-50348474 | MS.gene72414:CDS |
ATCCTATTCTTGCATTTGGA+AGG | 0.489120 | 1.4:+50346438 | None:intergenic |
GGCTTCACTCCAGCAATCAA+TGG | 0.490076 | 1.4:-50348356 | MS.gene72414:CDS |
GCATGGTCCATTACCTTCAG+TGG | 0.490275 | 1.4:-50346147 | MS.gene72414:CDS |
GATGGAAGACTACTAGTAGT+AGG | 0.491026 | 1.4:+50345954 | None:intergenic |
AAGGTTTGCAAGTGGATTTG+AGG | 0.493335 | 1.4:+50345722 | None:intergenic |
AAGTGGATTTGAGGTATGAT+TGG | 0.496682 | 1.4:+50345731 | None:intergenic |
TCAGCAATCTATTGATGAGT+TGG | 0.499317 | 1.4:-50346558 | MS.gene72414:CDS |
GGATAGGAAACCGGGTCACT+TGG | 0.499897 | 1.4:-50346537 | MS.gene72414:CDS |
GGGTGTTGCACGAGCATGGG+TGG | 0.499960 | 1.4:-50347629 | MS.gene72414:CDS |
CCCTGCAATTATAGTCAAGT+TGG | 0.500351 | 1.4:+50350301 | None:intergenic |
TGCAATTGCCATGATAATGA+TGG | 0.500990 | 1.4:+50346584 | None:intergenic |
CATCATTGACCAAGTTGTTA+CGG | 0.501594 | 1.4:+50347120 | None:intergenic |
CAGGTTATTGACAAGGAACT+GGG | 0.502494 | 1.4:-50348377 | MS.gene72414:CDS |
CGCAAAGGTGACTGCCCAGA+AGG | 0.505977 | 1.4:+50346368 | None:intergenic |
ACCAGGTCCTCAAAGCGAAT+CGG | 0.508811 | 1.4:+50350380 | None:intergenic |
AGATGGGAGTGGTCAATACT+TGG | 0.508924 | 1.4:+50346326 | None:intergenic |
GGAGTTGTTGGTGACATGAC+TGG | 0.510369 | 1.4:-50347700 | MS.gene72414:CDS |
TGGTCAATACTTGGTGGCGA+TGG | 0.510568 | 1.4:+50346335 | None:intergenic |
AACTTGGCCACTCTACCATC+AGG | 0.511984 | 1.4:+50347377 | None:intergenic |
AAGTTCTTCTGCTGTCAGGA+TGG | 0.514069 | 1.4:-50346474 | MS.gene72414:CDS |
CATGGTCCATTACCTTCAGT+GGG | 0.516887 | 1.4:-50346146 | MS.gene72414:CDS |
TCCGGATCTTTGATCAATCT+GGG | 0.517805 | 1.4:+50350548 | None:intergenic |
AAACATTTCTGATTTGGTGG+TGG | 0.518860 | 1.4:+50346687 | None:intergenic |
GGTATCTGAAGTCAAGTGAC+TGG | 0.519942 | 1.4:-50345260 | MS.gene72414:CDS |
GCTGATATCGATACTGATAT+GGG | 0.524787 | 1.4:-50345027 | MS.gene72414:CDS |
ATAGTCAAGTTGGTAATCAT+CGG | 0.527335 | 1.4:+50350311 | None:intergenic |
TAAGCATCTTGTATGAATGA+TGG | 0.527667 | 1.4:+50344975 | None:intergenic |
CTTTCTGTCATGAAGACTAA+AGG | 0.528198 | 1.4:-50347721 | MS.gene72414:intron |
CAAAGATGTGATTTCTGGAA+GGG | 0.528209 | 1.4:-50345001 | MS.gene72414:CDS |
TCCAAATGCAAGAATAGGAT+TGG | 0.528308 | 1.4:-50346435 | MS.gene72414:CDS |
ACAACTTGGTCAATGATGCT+TGG | 0.528728 | 1.4:-50347115 | MS.gene72414:CDS |
CTTTCAAGGAATTTGGGCAT+GGG | 0.530248 | 1.4:-50347410 | MS.gene72414:CDS |
GAAGACGAACCATTGATTGC+TGG | 0.530761 | 1.4:+50348347 | None:intergenic |
GCAGAAGAACTTGCATTGGC+TGG | 0.530869 | 1.4:+50346485 | None:intergenic |
GACAGCAGAAGAACTTGCAT+TGG | 0.531894 | 1.4:+50346481 | None:intergenic |
TCTTTCAAGGAATTTGGGCA+TGG | 0.532751 | 1.4:-50347411 | MS.gene72414:CDS |
ATTTGGGTGTTGCACGAGCA+TGG | 0.532868 | 1.4:-50347633 | MS.gene72414:CDS |
CACACAGCACACACAAGCAT+TGG | 0.534890 | 1.4:+50345124 | None:intergenic |
AGGAAACCGGGTCACTTGGA+TGG | 0.536873 | 1.4:-50346533 | MS.gene72414:CDS |
GGTGTTGCACGAGCATGGGT+GGG | 0.537282 | 1.4:-50347628 | MS.gene72414:CDS |
GGGACAACAATTTCATTCTG+TGG | 0.537466 | 1.4:-50346402 | MS.gene72414:CDS |
AGCAACAGGCATAGAGCTAC+TGG | 0.538550 | 1.4:+50345590 | None:intergenic |
TCTGGAACTGAATCATCGAA+TGG | 0.539164 | 1.4:+50347479 | None:intergenic |
GTTTAATTACTGCATCAAGA+TGG | 0.539394 | 1.4:-50345281 | MS.gene72414:CDS |
TCCTCAAAGCGAATCGGCTG+CGG | 0.540710 | 1.4:+50350386 | None:intergenic |
GGACAACAATTTCATTCTGT+GGG | 0.540912 | 1.4:-50346401 | MS.gene72414:CDS |
ATGAAGACTAAAGGAGTTGT+TGG | 0.543121 | 1.4:-50347712 | MS.gene72414:intron |
CTAACTCGTCTTTGGTAGAA+GGG | 0.543530 | 1.4:+50345538 | None:intergenic |
AATCTATTGATGAGTTGGAT+AGG | 0.544327 | 1.4:-50346553 | MS.gene72414:CDS |
TTGTACGGCAAAGCTGCTGC+TGG | 0.545510 | 1.4:-50347341 | MS.gene72414:CDS |
ATAGGATTGGCAGAAATTGA+GGG | 0.545609 | 1.4:-50346422 | MS.gene72414:CDS |
GTTCTTCTGCTGTCAGGATG+GGG | 0.546173 | 1.4:-50346472 | MS.gene72414:CDS |
CAACGTTGTCTTCTGCCTCA+CGG | 0.546813 | 1.4:-50350463 | MS.gene72414:CDS |
TCATGGTGTCCGTAACAACT+TGG | 0.546942 | 1.4:-50347129 | MS.gene72414:CDS |
GTGTTTCAGGGACCATATCT+GGG | 0.548092 | 1.4:-50347319 | MS.gene72414:CDS |
GCCTGAGATGCTGAGTCGAT+TGG | 0.548315 | 1.4:-50345637 | MS.gene72414:CDS |
TCGTCTTTGGTAGAAGGGAG+TGG | 0.550589 | 1.4:+50345543 | None:intergenic |
AATCTTTATCAGTCATCTCA+TGG | 0.552380 | 1.4:+50347653 | None:intergenic |
TAAGCCTAATGTAATCAGAA+AGG | 0.553154 | 1.4:-50345439 | MS.gene72414:CDS |
GTTATCGAGTGTCGTCAAGA+TGG | 0.554920 | 1.4:-50344941 | MS.gene72414:intron |
AAAGCTGCAAGTGTGAAGAA+TGG | 0.555647 | 1.4:-50345993 | MS.gene72414:CDS |
GGCCGAGCCCCTAATAGAGA+TGG | 0.559570 | 1.4:+50345936 | None:intergenic |
AATAATTCACTAATTACAGA+TGG | 0.563025 | 1.4:+50345411 | None:intergenic |
AGAACAGTTTAACAGACACT+TGG | 0.564013 | 1.4:-50345337 | MS.gene72414:CDS |
GGCACCCGATGACTGGGCTG+AGG | 0.565481 | 1.4:+50345755 | None:intergenic |
TGAGGCGCTGCTAACATTCG+AGG | 0.565559 | 1.4:+50345773 | None:intergenic |
CAGCATCTCAGGCGGCACCT+CGG | 0.567066 | 1.4:+50345647 | None:intergenic |
TGAAGATGGAGAGACATTTG+CGG | 0.567279 | 1.4:+50345866 | None:intergenic |
TATTGTTAAGAATATTGGGC+GGG | 0.568077 | 1.4:-50348726 | MS.gene72414:CDS |
GAAAGGCTGGACAACCACTA+AGG | 0.570430 | 1.4:-50345818 | MS.gene72414:CDS |
CAGACAGAATGATAGAGACT+TGG | 0.571604 | 1.4:-50350438 | MS.gene72414:CDS |
GAGCTTAAAAGGTTTGCAAG+TGG | 0.571961 | 1.4:+50345714 | None:intergenic |
AAGCATCTTGTATGAATGAT+GGG | 0.572499 | 1.4:+50344976 | None:intergenic |
TGAAAACCCACTGAAGGTAA+TGG | 0.573729 | 1.4:+50346140 | None:intergenic |
TTCATACTTTGACGGACAGA+AGG | 0.575787 | 1.4:+50348446 | None:intergenic |
ATGCCAGTTATGTTTCGTGT+TGG | 0.575808 | 1.4:+50347236 | None:intergenic |
ATGAATATTAGGAGAAAGGG+TGG | 0.578454 | 1.4:+50346208 | None:intergenic |
GTTCCTTGTCAATAACCTGA+AGG | 0.579728 | 1.4:+50348381 | None:intergenic |
TTAGGACACAGAAATTTGTA+CGG | 0.580372 | 1.4:-50347356 | MS.gene72414:CDS |
AATCATTTAACCTACCCTGC+TGG | 0.581296 | 1.4:+50348226 | None:intergenic |
ACTGTCATGAAAATAGTGAA+TGG | 0.583677 | 1.4:-50345080 | MS.gene72414:CDS |
ACTTGAGAAACAAAGGACCT+AGG | 0.585099 | 1.4:+50344805 | None:intergenic |
ACTACTAGTAGTAGGCATGT+TGG | 0.585305 | 1.4:+50345962 | None:intergenic |
TCAATAACCTGAAGGGTCTG+AGG | 0.587578 | 1.4:+50348389 | None:intergenic |
ATTGGTGGCACCCGATGACT+GGG | 0.588675 | 1.4:+50345749 | None:intergenic |
CCAACTTGACTATAATTGCA+GGG | 0.591066 | 1.4:-50350301 | MS.gene72414:CDS |
TTTGGGTGTTGCACGAGCAT+GGG | 0.591246 | 1.4:-50347632 | MS.gene72414:CDS |
TCAGTAAACTCATTCTCAGA+TGG | 0.591513 | 1.4:+50345216 | None:intergenic |
AAAGATGTGATTTCTGGAAG+GGG | 0.593892 | 1.4:-50345000 | MS.gene72414:CDS |
CCGCAAATGCTGCAATGATG+TGG | 0.596588 | 1.4:+50345378 | None:intergenic |
GCAAAGGTGACTGCCCAGAA+GGG | 0.596842 | 1.4:+50346369 | None:intergenic |
GGAGAATCAAGCTGGTCAGA+AGG | 0.597394 | 1.4:-50350279 | MS.gene72414:CDS |
GATGAGTTGGATAGGAAACC+GGG | 0.599826 | 1.4:-50346545 | MS.gene72414:CDS |
GAAGAACCTCCTGACTGAGA+AGG | 0.600108 | 1.4:+50345915 | None:intergenic |
TTCCTTGTCAATAACCTGAA+GGG | 0.601928 | 1.4:+50348382 | None:intergenic |
CAAAGGTGACTGCCCAGAAG+GGG | 0.605249 | 1.4:+50346370 | None:intergenic |
TAGTCTTCCATCTCTATTAG+GGG | 0.607054 | 1.4:-50345943 | MS.gene72414:CDS |
GTTGATTCAGATAACGACAT+AGG | 0.607844 | 1.4:+50345498 | None:intergenic |
GATAGAGTAGATGTCCTTAG+TGG | 0.608519 | 1.4:+50345804 | None:intergenic |
TCAAAGATGTGATTTCTGGA+AGG | 0.610835 | 1.4:-50345002 | MS.gene72414:CDS |
TGGATTTGAGGTATGATTGG+TGG | 0.612127 | 1.4:+50345734 | None:intergenic |
CACTCTTATACTGAGCCACC+AGG | 0.613868 | 1.4:+50350363 | None:intergenic |
AACGCGGGATTGACTGGTCA+TGG | 0.613892 | 1.4:-50347146 | MS.gene72414:CDS |
CTAAGCTCTTCACACGCTGA+AGG | 0.614902 | 1.4:-50346098 | MS.gene72414:CDS |
TGGGAGTGGTCAATACTTGG+TGG | 0.615822 | 1.4:+50346329 | None:intergenic |
GACCCTTCAGGTTATTGACA+AGG | 0.619126 | 1.4:-50348384 | MS.gene72414:CDS |
TAGGACAATGCAAACAACCT+AGG | 0.620289 | 1.4:-50344822 | MS.gene72414:CDS |
TGGAAAACCTGATGGTAGAG+TGG | 0.621439 | 1.4:-50347384 | MS.gene72414:CDS |
GCTCGGCCTTCTCAGTCAGG+AGG | 0.622282 | 1.4:-50345921 | MS.gene72414:CDS |
AGAGAAACTTTGGACAAAGG+TGG | 0.624040 | 1.4:+50346056 | None:intergenic |
ATTGCAGGGGAGAATCAAGC+TGG | 0.624878 | 1.4:-50350287 | MS.gene72414:CDS |
CTTCAGCATCTACTGCACTC+AGG | 0.627297 | 1.4:-50348328 | MS.gene72414:CDS |
GCGTCTTCAGCAGTCCAGCA+GGG | 0.628900 | 1.4:-50348240 | MS.gene72414:intron |
ACTTGTGCCTGGCTGCTCTG+AGG | 0.629876 | 1.4:+50346022 | None:intergenic |
ATGGGTATTGGAAAACCTGA+TGG | 0.630512 | 1.4:-50347392 | MS.gene72414:CDS |
GATGGAGACCGATGTCGCAA+AGG | 0.631090 | 1.4:+50346353 | None:intergenic |
CTGAGGAAGAGGAGTACTCG+TGG | 0.633914 | 1.4:-50347178 | MS.gene72414:CDS |
TATTTGTGCTAACATTCTAG+AGG | 0.634927 | 1.4:-50350243 | MS.gene72414:intron |
TCACAACTAAAAGAATTGCA+TGG | 0.635523 | 1.4:-50346164 | MS.gene72414:CDS |
CAACTTGACTATAATTGCAG+GGG | 0.636342 | 1.4:-50350300 | MS.gene72414:CDS |
CTTGGCTGAAAACCCACTGA+AGG | 0.637388 | 1.4:+50346134 | None:intergenic |
TGAATATTAGGAGAAAGGGT+GGG | 0.638126 | 1.4:+50346209 | None:intergenic |
ACAAGAGAAAGAGAATGCAC+TGG | 0.639577 | 1.4:-50345303 | MS.gene72414:CDS |
TCTTTATTATATTGGCTGTG+CGG | 0.641731 | 1.4:+50346239 | None:intergenic |
TCTGGGCAAAGAAATAGTGT+TGG | 0.643157 | 1.4:-50347302 | MS.gene72414:CDS |
CTTTGCTGCCAAACTACCCG+AGG | 0.643627 | 1.4:-50348690 | MS.gene72414:intron |
GATTCGCTTTGAGGACCTGG+TGG | 0.646909 | 1.4:-50350378 | MS.gene72414:CDS |
TGAGGAAGAGGAGTACTCGT+GGG | 0.646979 | 1.4:-50347177 | MS.gene72414:CDS |
GCTAGAGAAACTTTGGACAA+AGG | 0.647406 | 1.4:+50346053 | None:intergenic |
TCCTATGAAGACAATGAACA+TGG | 0.647694 | 1.4:-50347440 | MS.gene72414:CDS |
ATAACCTGAAGGGTCTGAGG+AGG | 0.653528 | 1.4:+50348392 | None:intergenic |
TACCAAATTCTCATCATCAG+CGG | 0.659988 | 1.4:+50347091 | None:intergenic |
CTGTCTAAGAGATAAAGAGA+TGG | 0.661117 | 1.4:+50348749 | None:intergenic |
CTCGTGGGATGAAATGAACG+CGG | 0.666918 | 1.4:-50347162 | MS.gene72414:CDS |
AATCGACTCAGCATCTCAGG+CGG | 0.676478 | 1.4:+50345639 | None:intergenic |
AGTAACTGAGACACCAGCCG+AGG | 0.678952 | 1.4:-50345664 | MS.gene72414:CDS |
TCGTGGGATGAAATGAACGC+GGG | 0.679409 | 1.4:-50347161 | MS.gene72414:CDS |
GTATTGTTAAGAATATTGGG+CGG | 0.684810 | 1.4:-50348727 | MS.gene72414:CDS |
ATAGATCCATCCAAGTGACC+CGG | 0.685222 | 1.4:+50346527 | None:intergenic |
AGTTTAACAGACACTTGGAG+TGG | 0.685283 | 1.4:-50345332 | MS.gene72414:CDS |
GTATCTGAAGTCAAGTGACT+GGG | 0.689129 | 1.4:-50345259 | MS.gene72414:CDS |
ATCATTCTGTCTGAACCGTG+AGG | 0.692354 | 1.4:+50350448 | None:intergenic |
CAATGCTTGTGTGTGCTGTG+TGG | 0.697000 | 1.4:-50345123 | MS.gene72414:CDS |
TAGTGAATGGATGTTCAAAG+GGG | 0.697533 | 1.4:-50345067 | MS.gene72414:CDS |
AAGAAAACAAGTGAATTCTG+GGG | 0.710568 | 1.4:-50350489 | MS.gene72414:CDS |
GGATTCACATGAATACTGTG+CGG | 0.751294 | 1.4:+50348281 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAGAAATTAGTTAATTAGAA+AGG | + | chr1.4:50347423-50347442 | None:intergenic | 15.0% |
!!! | ACTAATTAATTTTGATTGTA+AGG | + | chr1.4:50345571-50345590 | None:intergenic | 15.0% |
!!! | ATTATCAACATTTTTTTTGT+GGG | - | chr1.4:50345952-50345971 | MS.gene72414:CDS | 15.0% |
!!! | CTAATTAATTTTGATTGTAA+GGG | + | chr1.4:50345570-50345589 | None:intergenic | 15.0% |
!!! | TAATTAATTTTGATTGTAAG+GGG | + | chr1.4:50345569-50345588 | None:intergenic | 15.0% |
!!! | TATTTTTGTTGTAAAAAGAA+AGG | - | chr1.4:50346577-50346596 | MS.gene72414:CDS | 15.0% |
!! | AAAATGATTGTCAAACAAAA+AGG | + | chr1.4:50347483-50347502 | None:intergenic | 20.0% |
!! | AAATAGATGAATTAGAACTT+TGG | + | chr1.4:50350530-50350549 | None:intergenic | 20.0% |
!! | AATAATTCACTAATTACAGA+TGG | + | chr1.4:50349997-50350016 | None:intergenic | 20.0% |
!! | ACAGTATTGTTAAGAATATT+GGG | - | chr1.4:50346675-50346694 | MS.gene72414:CDS | 20.0% |
!! | ATAGATACTAAAGATAGAAA+TGG | - | chr1.4:50345757-50345776 | MS.gene72414:CDS | 20.0% |
!! | ATGGAATAAAAATGGAAAAA+AGG | - | chr1.4:50345301-50345320 | MS.gene72414:CDS | 20.0% |
!! | ATTCATAATTAATGATCTGA+AGG | + | chr1.4:50346830-50346849 | None:intergenic | 20.0% |
!! | GAGAAGAATCTTTATTATAT+TGG | + | chr1.4:50349177-50349196 | None:intergenic | 20.0% |
!! | GATAAATAAAGCAATAAGTT+GGG | + | chr1.4:50345519-50345538 | None:intergenic | 20.0% |
!! | GTAAAAAGATGGAATAAAAA+TGG | - | chr1.4:50345293-50345312 | MS.gene72414:CDS | 20.0% |
!! | GTGTTTGTAATTAAAGATAA+GGG | + | chr1.4:50348583-50348602 | None:intergenic | 20.0% |
!! | TACTTATGTGTTAAGATTAT+GGG | - | chr1.4:50345411-50345430 | MS.gene72414:CDS | 20.0% |
!! | TATTTGTACATATCTTTACA+TGG | - | chr1.4:50346792-50346811 | MS.gene72414:intron | 20.0% |
!! | TGTGTTTGTAATTAAAGATA+AGG | + | chr1.4:50348584-50348603 | None:intergenic | 20.0% |
!! | TGTTTGTAATTAAAGATAAG+GGG | + | chr1.4:50348582-50348601 | None:intergenic | 20.0% |
!! | TTAACTAATTTCTATTCCTA+TGG | - | chr1.4:50347429-50347448 | MS.gene72414:CDS | 20.0% |
!! | TTACTTATGTGTTAAGATTA+TGG | - | chr1.4:50345410-50345429 | MS.gene72414:CDS | 20.0% |
!!! | ATCTTGGAAGTATAAATTTA+AGG | + | chr1.4:50347208-50347227 | None:intergenic | 20.0% |
!!! | ATTGTTAGAATTTGGTAATT+TGG | - | chr1.4:50348339-50348358 | MS.gene72414:CDS | 20.0% |
!!! | ATTTTTTCAAATCTTACCTT+AGG | - | chr1.4:50345903-50345922 | MS.gene72414:CDS | 20.0% |
!!! | CGTAAAACATCTAATTTTTT+GGG | - | chr1.4:50349139-50349158 | MS.gene72414:intron | 20.0% |
!!! | GATTATCAACATTTTTTTTG+TGG | - | chr1.4:50345951-50345970 | MS.gene72414:CDS | 20.0% |
!!! | GCAATTGTTGTATTTTAAAT+TGG | - | chr1.4:50347396-50347415 | MS.gene72414:CDS | 20.0% |
!!! | TAATTACTCCTTTACATTTT+AGG | - | chr1.4:50346907-50346926 | MS.gene72414:intron | 20.0% |
!!! | TCGTAAAACATCTAATTTTT+TGG | - | chr1.4:50349138-50349157 | MS.gene72414:intron | 20.0% |
!!! | TTATCAACATTTTTTTTGTG+GGG | - | chr1.4:50345953-50345972 | MS.gene72414:CDS | 20.0% |
!!! | TTCAATTGGTTTATTTGTTT+TGG | - | chr1.4:50345220-50345239 | MS.gene72414:CDS | 20.0% |
!!! | TTGTTAGAATTTGGTAATTT+GGG | - | chr1.4:50348340-50348359 | MS.gene72414:CDS | 20.0% |
!!! | TTTTATCGAGATTTAAAGTT+GGG | + | chr1.4:50348470-50348489 | None:intergenic | 20.0% |
!!! | TTTTTATCGAGATTTAAAGT+TGG | + | chr1.4:50348471-50348490 | None:intergenic | 20.0% |
!!! | TTTTTGTAACTGTAAAAAGA+TGG | - | chr1.4:50345282-50345301 | MS.gene72414:CDS | 20.0% |
! | AAAGAAAACAAGTGAATTCT+GGG | - | chr1.4:50344915-50344934 | MS.gene72414:intron | 25.0% |
! | AAAGATGTTTCATACTTTGA+CGG | + | chr1.4:50346970-50346989 | None:intergenic | 25.0% |
! | AACATGAATATTAGGAGAAA+GGG | + | chr1.4:50349203-50349222 | None:intergenic | 25.0% |
! | AATTATGTAAATGACTTTCC+AGG | - | chr1.4:50346613-50346632 | MS.gene72414:CDS | 25.0% |
! | AATTTGTAGTTCAGTTATTG+GGG | + | chr1.4:50348538-50348557 | None:intergenic | 25.0% |
! | ACAGATATTAGAAATGTCAT+TGG | - | chr1.4:50349934-50349953 | MS.gene72414:intron | 25.0% |
! | AGAATGATGAGATGAAATTT+GGG | + | chr1.4:50348632-50348651 | None:intergenic | 25.0% |
! | AGAGATGTAATGTATTCATA+AGG | - | chr1.4:50345456-50345475 | MS.gene72414:CDS | 25.0% |
! | ATAAAATTCTATACCTTCGA+TGG | - | chr1.4:50348495-50348514 | MS.gene72414:intron | 25.0% |
! | ATTTGGGTCATTATATTAAC+TGG | + | chr1.4:50348616-50348635 | None:intergenic | 25.0% |
! | CAAAGAATTGAAATGAAACA+TGG | + | chr1.4:50345795-50345814 | None:intergenic | 25.0% |
! | GAAATCGAATTTCAAAATCT+TGG | + | chr1.4:50347224-50347243 | None:intergenic | 25.0% |
! | GAATTTGTAGTTCAGTTATT+GGG | + | chr1.4:50348539-50348558 | None:intergenic | 25.0% |
! | GACAGTATTGTTAAGAATAT+TGG | - | chr1.4:50346674-50346693 | MS.gene72414:CDS | 25.0% |
! | GACATATGTTAATGTAGAAA+AGG | + | chr1.4:50346524-50346543 | None:intergenic | 25.0% |
! | GCAAGTAACTAGTTAAAAAT+AGG | + | chr1.4:50346887-50346906 | None:intergenic | 25.0% |
! | GGATAAATAAAGCAATAAGT+TGG | + | chr1.4:50345520-50345539 | None:intergenic | 25.0% |
! | GGTTTAACTATCAGTAATTT+GGG | + | chr1.4:50348561-50348580 | None:intergenic | 25.0% |
! | GTTTCTTATGTTATGTTATG+TGG | - | chr1.4:50345369-50345388 | MS.gene72414:CDS | 25.0% |
! | TAAAATAATATGCCTAGTGT+AGG | - | chr1.4:50348419-50348438 | MS.gene72414:CDS | 25.0% |
! | TAAAATTCTATACCTTCGAT+GGG | - | chr1.4:50348496-50348515 | MS.gene72414:intron | 25.0% |
! | TAGAATGATGAGATGAAATT+TGG | + | chr1.4:50348633-50348652 | None:intergenic | 25.0% |
! | TAGATGTTTCTTTGTTCAAT+TGG | - | chr1.4:50345206-50345225 | MS.gene72414:CDS | 25.0% |
! | TATTTGAAAAACTATGCTTG+AGG | + | chr1.4:50348129-50348148 | None:intergenic | 25.0% |
! | TCAAAATATGACATGATTAC+AGG | - | chr1.4:50347255-50347274 | MS.gene72414:CDS | 25.0% |
! | TCAATAAAATGTGGAATGTT+AGG | - | chr1.4:50346273-50346292 | MS.gene72414:CDS | 25.0% |
! | TCATTAGTATGTAGATTTGT+TGG | - | chr1.4:50348661-50348680 | MS.gene72414:intron | 25.0% |
! | TCCAAACTATCAATAAAATG+TGG | - | chr1.4:50346264-50346283 | MS.gene72414:CDS | 25.0% |
! | TGAAATTTAGTAGTCCATAT+GGG | - | chr1.4:50345607-50345626 | MS.gene72414:CDS | 25.0% |
! | TTAGATATCTATTCTTCTCT+TGG | - | chr1.4:50346738-50346757 | MS.gene72414:intron | 25.0% |
! | TTGGTAAGATTGTTAGAATT+TGG | - | chr1.4:50348331-50348350 | MS.gene72414:CDS | 25.0% |
! | TTTCTACATTAACATATGTC+AGG | - | chr1.4:50346524-50346543 | MS.gene72414:CDS | 25.0% |
!! | ACCAAATCAGAAATGTTTTT+GGG | - | chr1.4:50348723-50348742 | MS.gene72414:CDS | 25.0% |
!! | CAAAGTATGAAACATCTTTT+TGG | - | chr1.4:50346971-50346990 | MS.gene72414:intron | 25.0% |
!! | GGATTTTCATGATTATTCAT+CGG | - | chr1.4:50345477-50345496 | MS.gene72414:CDS | 25.0% |
!! | GTTCTTGGAATTTAAGTTTA+AGG | + | chr1.4:50350053-50350072 | None:intergenic | 25.0% |
!! | TGACATTTTCATCATTAATC+AGG | + | chr1.4:50347458-50347477 | None:intergenic | 25.0% |
!! | TTTATCATGATTTGGAAGAT+TGG | - | chr1.4:50346156-50346175 | MS.gene72414:CDS | 25.0% |
!!! | AAAACATCTAATTTTTTGGG+AGG | - | chr1.4:50349142-50349161 | MS.gene72414:intron | 25.0% |
!!! | AATTGGTTTATTTGTTTTGG+AGG | - | chr1.4:50345223-50345242 | MS.gene72414:CDS | 25.0% |
!!! | ACTTGTTTTCTTTGTTGAAT+TGG | + | chr1.4:50344908-50344927 | None:intergenic | 25.0% |
!!! | AGCTATATATTGTTGATTTC+TGG | - | chr1.4:50346492-50346511 | MS.gene72414:CDS | 25.0% |
!!! | AGGCATATTATTTTATCTCA+GGG | + | chr1.4:50348414-50348433 | None:intergenic | 25.0% |
!!! | ATGTAATTGTTTCTTTTCAG+TGG | + | chr1.4:50348786-50348805 | None:intergenic | 25.0% |
!!! | ATTGGTTTATTTGTTTTGGA+GGG | - | chr1.4:50345224-50345243 | MS.gene72414:CDS | 25.0% |
!!! | TAGGCATATTATTTTATCTC+AGG | + | chr1.4:50348415-50348434 | None:intergenic | 25.0% |
!!! | TATCAACATTTTTTTTGTGG+GGG | - | chr1.4:50345954-50345973 | MS.gene72414:CDS | 25.0% |
!!! | TCCACATTTTATTGATAGTT+TGG | + | chr1.4:50346268-50346287 | None:intergenic | 25.0% |
!!! | TTATTGACTTTATGTGCAAA+GGG | - | chr1.4:50345688-50345707 | MS.gene72414:CDS | 25.0% |
!!! | TTTATTGACTTTATGTGCAA+AGG | - | chr1.4:50345687-50345706 | MS.gene72414:CDS | 25.0% |
AAATATGGCATGCTAAGATA+AGG | - | chr1.4:50346077-50346096 | MS.gene72414:CDS | 30.0% | |
AAGAAAACAAGTGAATTCTG+GGG | - | chr1.4:50344916-50344935 | MS.gene72414:intron | 30.0% | |
AAGAATAGATATCTAACCTC+GGG | + | chr1.4:50346734-50346753 | None:intergenic | 30.0% | |
AAGCATAATGACCGTAATAA+AGG | + | chr1.4:50345329-50345348 | None:intergenic | 30.0% | |
AAGCATCTTGTATGAATGAT+GGG | + | chr1.4:50350432-50350451 | None:intergenic | 30.0% | |
AAGTCTCCAACATGAATATT+AGG | + | chr1.4:50349211-50349230 | None:intergenic | 30.0% | |
AATAGTGAATGGATGTTCAA+AGG | - | chr1.4:50350336-50350355 | MS.gene72414:CDS | 30.0% | |
AATCTTTATCAGTCATCTCA+TGG | + | chr1.4:50347755-50347774 | None:intergenic | 30.0% | |
AATTTGGATCAAGGAGAATA+TGG | - | chr1.4:50346121-50346140 | MS.gene72414:CDS | 30.0% | |
ACTGTCATGAAAATAGTGAA+TGG | - | chr1.4:50350325-50350344 | MS.gene72414:CDS | 30.0% | |
AGCATAATGACCGTAATAAA+GGG | + | chr1.4:50345328-50345347 | None:intergenic | 30.0% | |
ATACACATCAAAAGACATGA+AGG | + | chr1.4:50346775-50346794 | None:intergenic | 30.0% | |
ATACATTACATCTCTTCACA+TGG | + | chr1.4:50345451-50345470 | None:intergenic | 30.0% | |
ATAGTGAATGGATGTTCAAA+GGG | - | chr1.4:50350337-50350356 | MS.gene72414:CDS | 30.0% | |
CAAAGAAAACAAGTGAATTC+TGG | - | chr1.4:50344914-50344933 | MS.gene72414:intron | 30.0% | |
CAACATGAATATTAGGAGAA+AGG | + | chr1.4:50349204-50349223 | None:intergenic | 30.0% | |
CTGAAATTTAGTAGTCCATA+TGG | - | chr1.4:50345606-50345625 | MS.gene72414:CDS | 30.0% | |
CTTTCTCCTAATATTCATGT+TGG | - | chr1.4:50349202-50349221 | MS.gene72414:intron | 30.0% | |
GAAAAAAGGACCCTTTATTA+CGG | - | chr1.4:50345315-50345334 | MS.gene72414:CDS | 30.0% | |
GAAATTTAGTAGTCCATATG+GGG | - | chr1.4:50345608-50345627 | MS.gene72414:CDS | 30.0% | |
GAAGAATAGATATCTAACCT+CGG | + | chr1.4:50346735-50346754 | None:intergenic | 30.0% | |
GAGATGACTGATAAAGATTT+GGG | - | chr1.4:50347756-50347775 | MS.gene72414:intron | 30.0% | |
GATTTATGTCAGTGATGAAT+TGG | - | chr1.4:50347277-50347296 | MS.gene72414:CDS | 30.0% | |
GCAGAATACCTAAAATGTAA+AGG | + | chr1.4:50346918-50346937 | None:intergenic | 30.0% | |
GGAAGATATCATCAAAATTC+TGG | + | chr1.4:50348376-50348395 | None:intergenic | 30.0% | |
GGAATTTGTAGTTCAGTTAT+TGG | + | chr1.4:50348540-50348559 | None:intergenic | 30.0% | |
GGGTTTAACTATCAGTAATT+TGG | + | chr1.4:50348562-50348581 | None:intergenic | 30.0% | |
GTATTGTTAAGAATATTGGG+CGG | - | chr1.4:50346678-50346697 | MS.gene72414:CDS | 30.0% | |
GTCATTATATTAACTGGTGA+GGG | + | chr1.4:50348610-50348629 | None:intergenic | 30.0% | |
GTTTAATTACTGCATCAAGA+TGG | - | chr1.4:50350124-50350143 | MS.gene72414:intron | 30.0% | |
TAAGCATCTTGTATGAATGA+TGG | + | chr1.4:50350433-50350452 | None:intergenic | 30.0% | |
TAAGCCTAATGTAATCAGAA+AGG | - | chr1.4:50349966-50349985 | MS.gene72414:intron | 30.0% | |
TATTGTTAAGAATATTGGGC+GGG | - | chr1.4:50346679-50346698 | MS.gene72414:CDS | 30.0% | |
TATTTGTGCTAACATTCTAG+AGG | - | chr1.4:50345162-50345181 | MS.gene72414:CDS | 30.0% | |
TCACAACTAAAAGAATTGCA+TGG | - | chr1.4:50349241-50349260 | MS.gene72414:intron | 30.0% | |
TCAGGGAATTCAATCTTATA+TGG | + | chr1.4:50348397-50348416 | None:intergenic | 30.0% | |
TCATCATGCAAAGAATGAAT+TGG | + | chr1.4:50347307-50347326 | None:intergenic | 30.0% | |
TCCAATCTTTCAAGGAATTT+GGG | - | chr1.4:50347989-50348008 | MS.gene72414:intron | 30.0% | |
TGAGATGACTGATAAAGATT+TGG | - | chr1.4:50347755-50347774 | MS.gene72414:intron | 30.0% | |
TGTTAGTCAATTCCTTATTC+TGG | + | chr1.4:50346375-50346394 | None:intergenic | 30.0% | |
TGTTGTCCTAATAAGAAACA+GGG | + | chr1.4:50347366-50347385 | None:intergenic | 30.0% | |
TTAAGCTCATTAGTTGCAAA+GGG | - | chr1.4:50349706-50349725 | MS.gene72414:intron | 30.0% | |
TTAGCATGCCATATTTACTT+GGG | + | chr1.4:50346073-50346092 | None:intergenic | 30.0% | |
TTAGGACACAGAAATTTGTA+CGG | - | chr1.4:50348049-50348068 | MS.gene72414:intron | 30.0% | |
TTCAATTGCCCAAGTAAATA+TGG | - | chr1.4:50346062-50346081 | MS.gene72414:CDS | 30.0% | |
TTCATCGGAATTCATTTCAT+TGG | - | chr1.4:50345492-50345511 | MS.gene72414:CDS | 30.0% | |
TTCCAATCTTTCAAGGAATT+TGG | - | chr1.4:50347988-50348007 | MS.gene72414:intron | 30.0% | |
TTGCAACTAATGAGCTTAAA+AGG | + | chr1.4:50349705-50349724 | None:intergenic | 30.0% | |
TTTAAGCTCATTAGTTGCAA+AGG | - | chr1.4:50349705-50349724 | MS.gene72414:intron | 30.0% | |
! | AATCTATTGATGAGTTGGAT+AGG | - | chr1.4:50348852-50348871 | MS.gene72414:intron | 30.0% |
! | CACCAAATCAGAAATGTTTT+TGG | - | chr1.4:50348722-50348741 | MS.gene72414:CDS | 30.0% |
! | GGACACTGATGAAATTATTT+TGG | + | chr1.4:50349521-50349540 | None:intergenic | 30.0% |
! | GGTTCTTTTGATCTATCAAA+CGG | + | chr1.4:50344824-50344843 | None:intergenic | 30.0% |
! | TAATCTCCCTGTTTCTTATT+AGG | - | chr1.4:50347357-50347376 | MS.gene72414:CDS | 30.0% |
! | TCTTTATTATATTGGCTGTG+CGG | + | chr1.4:50349169-50349188 | None:intergenic | 30.0% |
! | TGTTGGTGTTTATCATGATT+TGG | - | chr1.4:50346148-50346167 | MS.gene72414:CDS | 30.0% |
!! | AAACTTGCTGTGTTATTTCT+AGG | - | chr1.4:50350564-50350583 | MS.gene72414:CDS | 30.0% |
!! | AAGGCTTTATTTCATGTAAG+TGG | - | chr1.4:50350488-50350507 | MS.gene72414:CDS | 30.0% |
!! | ATAGTCAAGTTGGTAATCAT+CGG | + | chr1.4:50345097-50345116 | None:intergenic | 30.0% |
!! | CAAAAACATTTCTGATTTGG+TGG | + | chr1.4:50348724-50348743 | None:intergenic | 30.0% |
!! | CCAAATCAGAAATGTTTTTG+GGG | - | chr1.4:50348724-50348743 | MS.gene72414:CDS | 30.0% |
!! | CTTAGGTTTGACTTGTATAT+GGG | - | chr1.4:50345920-50345939 | MS.gene72414:CDS | 30.0% |
!! | CTTATTGCTTTATTTATCCG+AGG | - | chr1.4:50345521-50345540 | MS.gene72414:CDS | 30.0% |
!! | TACATTTTAGGTATTCTGCA+AGG | - | chr1.4:50346919-50346938 | MS.gene72414:intron | 30.0% |
!! | TATTGACTTTATGTGCAAAG+GGG | - | chr1.4:50345689-50345708 | MS.gene72414:CDS | 30.0% |
!! | TTGGCTAGTTTGCATAAATT+GGG | + | chr1.4:50347530-50347549 | None:intergenic | 30.0% |
!! | TTGTGGGGGTTATTTTATAA+AGG | - | chr1.4:50345968-50345987 | MS.gene72414:CDS | 30.0% |
!!! | TGAAACATCTTTTTGGAACT+TGG | - | chr1.4:50346978-50346997 | MS.gene72414:intron | 30.0% |
!!! | TGATGAAATTATTTTGGCAG+CGG | + | chr1.4:50349515-50349534 | None:intergenic | 30.0% |
!!! | TTGGTTTATTTGTTTTGGAG+GGG | - | chr1.4:50345225-50345244 | MS.gene72414:CDS | 30.0% |
AAAAAACCTCAAAGAAAGGC+TGG | - | chr1.4:50349574-50349593 | MS.gene72414:intron | 35.0% | |
AACATGGTTCCAATCTTTCA+AGG | - | chr1.4:50347981-50348000 | MS.gene72414:intron | 35.0% | |
AAGGAGAATATGGCATATGT+TGG | - | chr1.4:50346131-50346150 | MS.gene72414:CDS | 35.0% | |
AAGTAGCTGGAAAAATTCTG+AGG | - | chr1.4:50348210-50348229 | MS.gene72414:intron | 35.0% | |
AATCTGGGTCTCTTCAAAAT+CGG | + | chr1.4:50344845-50344864 | None:intergenic | 35.0% | |
ACATACCTCTGCAATCAATT+TGG | - | chr1.4:50346105-50346124 | MS.gene72414:CDS | 35.0% | |
ACCAACTTGACTATAATTGC+AGG | - | chr1.4:50345103-50345122 | MS.gene72414:CDS | 35.0% | |
ACCATGTTCATTGTCTTCAT+AGG | + | chr1.4:50347969-50347988 | None:intergenic | 35.0% | |
ACGCTGTCTTTCAAAATACT+TGG | + | chr1.4:50347149-50347168 | None:intergenic | 35.0% | |
AGAACAGTTTAACAGACACT+TGG | - | chr1.4:50350068-50350087 | MS.gene72414:intron | 35.0% | |
AGATAGAAATGGTTACTCCA+TGG | - | chr1.4:50345768-50345787 | MS.gene72414:CDS | 35.0% | |
AGCAGAGTGAATAGCATAAA+GGG | + | chr1.4:50347851-50347870 | None:intergenic | 35.0% | |
AGCATCATCCATCATTATCA+TGG | - | chr1.4:50348813-50348832 | MS.gene72414:intron | 35.0% | |
AGTAGTCTTCCATCTCTATT+AGG | - | chr1.4:50349460-50349479 | MS.gene72414:intron | 35.0% | |
AGTATCATCTAACTCGTCTT+TGG | + | chr1.4:50349878-50349897 | None:intergenic | 35.0% | |
AGTGTCTGTTAAACTGTTCT+TGG | + | chr1.4:50350068-50350087 | None:intergenic | 35.0% | |
ATCATTAATCAGGAGACCAT+AGG | + | chr1.4:50347448-50347467 | None:intergenic | 35.0% | |
ATCATTATCATGGCAATTGC+AGG | - | chr1.4:50348823-50348842 | MS.gene72414:intron | 35.0% | |
ATCCTATTCTTGCATTTGGA+AGG | + | chr1.4:50348970-50348989 | None:intergenic | 35.0% | |
ATGAAGACTAAAGGAGTTGT+TGG | - | chr1.4:50347693-50347712 | MS.gene72414:CDS | 35.0% | |
ATGAATATTAGGAGAAAGGG+TGG | + | chr1.4:50349200-50349219 | None:intergenic | 35.0% | |
CAAAAATCAAGAGGATGCAA+TGG | - | chr1.4:50350242-50350261 | MS.gene72414:intron | 35.0% | |
CAAATTTCTGTGTCCTAACT+TGG | + | chr1.4:50348047-50348066 | None:intergenic | 35.0% | |
CAACTTGACTATAATTGCAG+GGG | - | chr1.4:50345105-50345124 | MS.gene72414:CDS | 35.0% | |
CATATATTGTACTTGTTCCG+AGG | - | chr1.4:50346235-50346254 | MS.gene72414:CDS | 35.0% | |
CATCAATCATCATTAGAGAG+TGG | - | chr1.4:50345642-50345661 | MS.gene72414:CDS | 35.0% | |
CATCATTGACCAAGTTGTTA+CGG | + | chr1.4:50348288-50348307 | None:intergenic | 35.0% | |
CATTCTTTGCATGATGAAAC+TGG | - | chr1.4:50347310-50347329 | MS.gene72414:CDS | 35.0% | |
CCAACTTGACTATAATTGCA+GGG | - | chr1.4:50345104-50345123 | MS.gene72414:CDS | 35.0% | |
CCATATACAAGTCAAACCTA+AGG | + | chr1.4:50345922-50345941 | None:intergenic | 35.0% | |
CCCCAAAAACATTTCTGATT+TGG | + | chr1.4:50348727-50348746 | None:intergenic | 35.0% | |
CGCTGTCTTTCAAAATACTT+GGG | + | chr1.4:50347148-50347167 | None:intergenic | 35.0% | |
CTGTCTAAGAGATAAAGAGA+TGG | + | chr1.4:50346659-50346678 | None:intergenic | 35.0% | |
CTTAGCATGCCATATTTACT+TGG | + | chr1.4:50346074-50346093 | None:intergenic | 35.0% | |
CTTTCTGTCATGAAGACTAA+AGG | - | chr1.4:50347684-50347703 | MS.gene72414:CDS | 35.0% | |
GAAACAACAACACTCAAATC+AGG | + | chr1.4:50345354-50345373 | None:intergenic | 35.0% | |
GAAATGTGATATCAAGTAGC+TGG | - | chr1.4:50348197-50348216 | MS.gene72414:intron | 35.0% | |
GACATTTCTAATATCTGTGC+TGG | + | chr1.4:50349932-50349951 | None:intergenic | 35.0% | |
GATAGTTTGGATCAATTCCT+CGG | + | chr1.4:50346255-50346274 | None:intergenic | 35.0% | |
GATGGATCTATGTTAATGTC+TGG | - | chr1.4:50348890-50348909 | MS.gene72414:intron | 35.0% | |
GCAGAAAAAACCTCAAAGAA+AGG | - | chr1.4:50349570-50349589 | MS.gene72414:intron | 35.0% | |
GCTGATATCGATACTGATAT+GGG | - | chr1.4:50350378-50350397 | MS.gene72414:CDS | 35.0% | |
GGAATCAAAGATGTGATTTC+TGG | - | chr1.4:50350399-50350418 | MS.gene72414:CDS | 35.0% | |
GGACAACAATTTCATTCTGT+GGG | - | chr1.4:50349004-50349023 | MS.gene72414:intron | 35.0% | |
GGTCATTATATTAACTGGTG+AGG | + | chr1.4:50348611-50348630 | None:intergenic | 35.0% | |
GTAGTCTTCCATCTCTATTA+GGG | - | chr1.4:50349461-50349480 | MS.gene72414:intron | 35.0% | |
GTGTTGTCCTAATAAGAAAC+AGG | + | chr1.4:50347367-50347386 | None:intergenic | 35.0% | |
TAACATCCACTTATGTTGAG+TGG | - | chr1.4:50347815-50347834 | MS.gene72414:intron | 35.0% | |
TACCAAATTCTCATCATCAG+CGG | + | chr1.4:50348317-50348336 | None:intergenic | 35.0% | |
TAGTCTTCCATCTCTATTAG+GGG | - | chr1.4:50349462-50349481 | MS.gene72414:intron | 35.0% | |
TAGTGAATGGATGTTCAAAG+GGG | - | chr1.4:50350338-50350357 | MS.gene72414:CDS | 35.0% | |
TCAGCAATCTATTGATGAGT+TGG | - | chr1.4:50348847-50348866 | MS.gene72414:intron | 35.0% | |
TCAGTAAACTCATTCTCAGA+TGG | + | chr1.4:50350192-50350211 | None:intergenic | 35.0% | |
TCCAAATGCAAGAATAGGAT+TGG | - | chr1.4:50348970-50348989 | MS.gene72414:intron | 35.0% | |
TCCTATGAAGACAATGAACA+TGG | - | chr1.4:50347965-50347984 | MS.gene72414:intron | 35.0% | |
TCTGCAATCAATTTGGATCA+AGG | - | chr1.4:50346112-50346131 | MS.gene72414:CDS | 35.0% | |
TGAATATTAGGAGAAAGGGT+GGG | + | chr1.4:50349199-50349218 | None:intergenic | 35.0% | |
TGCACCTTTCTGATTACATT+AGG | + | chr1.4:50349973-50349992 | None:intergenic | 35.0% | |
TTCCTTCCAAATGCAAGAAT+AGG | - | chr1.4:50348965-50348984 | MS.gene72414:intron | 35.0% | |
TTCCTTGTCAATAACCTGAA+GGG | + | chr1.4:50347026-50347045 | None:intergenic | 35.0% | |
TTGAAATGAAACATGGACCA+TGG | + | chr1.4:50345788-50345807 | None:intergenic | 35.0% | |
TTGATCCAAATTGATTGCAG+AGG | + | chr1.4:50346113-50346132 | None:intergenic | 35.0% | |
! | AAAGATGTGATTTCTGGAAG+GGG | - | chr1.4:50350405-50350424 | MS.gene72414:CDS | 35.0% |
! | AAGTGGATTTGAGGTATGAT+TGG | + | chr1.4:50349677-50349696 | None:intergenic | 35.0% |
! | AATAGGATTGGCAGAAATTG+AGG | - | chr1.4:50348982-50349001 | MS.gene72414:intron | 35.0% |
! | ACTATTTCTTTGCCCAGATA+TGG | + | chr1.4:50348101-50348120 | None:intergenic | 35.0% |
! | ATAGGATTGGCAGAAATTGA+GGG | - | chr1.4:50348983-50349002 | MS.gene72414:intron | 35.0% |
! | CAAAGATGTGATTTCTGGAA+GGG | - | chr1.4:50350404-50350423 | MS.gene72414:CDS | 35.0% |
! | GTTGATTCAGATAACGACAT+AGG | + | chr1.4:50349910-50349929 | None:intergenic | 35.0% |
! | TCAAAGATGTGATTTCTGGA+AGG | - | chr1.4:50350403-50350422 | MS.gene72414:CDS | 35.0% |
! | TGCAATTGCCATGATAATGA+TGG | + | chr1.4:50348824-50348843 | None:intergenic | 35.0% |
! | TGCTTTTGATACACTATTGC+TGG | - | chr1.4:50346434-50346453 | MS.gene72414:CDS | 35.0% |
! | TGTGGAATGTTAGGTTTGTT+TGG | - | chr1.4:50346282-50346301 | MS.gene72414:CDS | 35.0% |
! | TTAGATGTTTTACGAGTGTG+AGG | + | chr1.4:50349133-50349152 | None:intergenic | 35.0% |
!! | AAACATTTCTGATTTGGTGG+TGG | + | chr1.4:50348721-50348740 | None:intergenic | 35.0% |
!! | CCTTAGGTTTGACTTGTATA+TGG | - | chr1.4:50345919-50345938 | MS.gene72414:CDS | 35.0% |
!! | CTTGGCTAGTTTGCATAAAT+TGG | + | chr1.4:50347531-50347550 | None:intergenic | 35.0% |
!! | TGGCTAGTTTGCATAAATTG+GGG | + | chr1.4:50347529-50347548 | None:intergenic | 35.0% |
!!! | CATCTTTTTGGAACTTGGAA+AGG | - | chr1.4:50346983-50347002 | MS.gene72414:intron | 35.0% |
!!! | GGTTTTTTTTGTTGTTGTGC+AGG | - | chr1.4:50348682-50348701 | MS.gene72414:intron | 35.0% |
!!! | TTTTCTGGCTAGAGAAACTT+TGG | + | chr1.4:50349362-50349381 | None:intergenic | 35.0% |
AAAGCTGCAAGTGTGAAGAA+TGG | - | chr1.4:50349412-50349431 | MS.gene72414:intron | 40.0% | |
AATCATTTAACCTACCCTGC+TGG | + | chr1.4:50347182-50347201 | None:intergenic | 40.0% | |
ACAACTTGGTCAATGATGCT+TGG | - | chr1.4:50348290-50348309 | MS.gene72414:CDS | 40.0% | |
ACAAGAGAAAGAGAATGCAC+TGG | - | chr1.4:50350102-50350121 | MS.gene72414:intron | 40.0% | |
ACCCAGATTGATCAAAGATC+CGG | - | chr1.4:50344856-50344875 | MS.gene72414:intron | 40.0% | |
ACTACTAGTAGTAGGCATGT+TGG | + | chr1.4:50349446-50349465 | None:intergenic | 40.0% | |
ACTTGAGAAACAAAGGACCT+AGG | + | chr1.4:50350603-50350622 | None:intergenic | 40.0% | |
AGAGAAACTTTGGACAAAGG+TGG | + | chr1.4:50349352-50349371 | None:intergenic | 40.0% | |
AGTGCATTCTCTTTCTCTTG+TGG | + | chr1.4:50350103-50350122 | None:intergenic | 40.0% | |
AGTTTAACAGACACTTGGAG+TGG | - | chr1.4:50350073-50350092 | MS.gene72414:intron | 40.0% | |
ATATCTAACCTCGGGTAGTT+TGG | + | chr1.4:50346726-50346745 | None:intergenic | 40.0% | |
ATCCGGATCTTTGATCAATC+TGG | + | chr1.4:50344861-50344880 | None:intergenic | 40.0% | |
ATGCCAGTTATGTTTCGTGT+TGG | + | chr1.4:50348172-50348191 | None:intergenic | 40.0% | |
ATTCTGCAAGGCATACAAAC+AGG | - | chr1.4:50346931-50346950 | MS.gene72414:intron | 40.0% | |
ATTGGACAGTATTCATGCAG+AGG | - | chr1.4:50346174-50346193 | MS.gene72414:CDS | 40.0% | |
CAAAGGGGAGTAAGAATCTT+TGG | - | chr1.4:50345704-50345723 | MS.gene72414:CDS | 40.0% | |
CAGACAGAATGATAGAGACT+TGG | - | chr1.4:50344967-50344986 | MS.gene72414:CDS | 40.0% | |
CAGCAGAGTGAATAGCATAA+AGG | + | chr1.4:50347852-50347871 | None:intergenic | 40.0% | |
CAGGTTATTGACAAGGAACT+GGG | - | chr1.4:50347028-50347047 | MS.gene72414:intron | 40.0% | |
CAGTAACAACCAAGGTCTTA+CGG | + | chr1.4:50346340-50346359 | None:intergenic | 40.0% | |
CATGTAAGTGGACAGAATAG+AGG | - | chr1.4:50350500-50350519 | MS.gene72414:CDS | 40.0% | |
CCCTGCAATTATAGTCAAGT+TGG | + | chr1.4:50345107-50345126 | None:intergenic | 40.0% | |
CGAACCAGACAAAAATCAAG+AGG | - | chr1.4:50350233-50350252 | MS.gene72414:intron | 40.0% | |
CGCTGATATCGATACTGATA+TGG | - | chr1.4:50350377-50350396 | MS.gene72414:CDS | 40.0% | |
CTAACTCGTCTTTGGTAGAA+GGG | + | chr1.4:50349870-50349889 | None:intergenic | 40.0% | |
CTTAGTTGTTGCTGATACCT+TGG | + | chr1.4:50349292-50349311 | None:intergenic | 40.0% | |
CTTTCAAGGAATTTGGGCAT+GGG | - | chr1.4:50347995-50348014 | MS.gene72414:intron | 40.0% | |
GAAAGACCACTCAACATAAG+TGG | + | chr1.4:50347824-50347843 | None:intergenic | 40.0% | |
GAGCTTAAAAGGTTTGCAAG+TGG | + | chr1.4:50349694-50349713 | None:intergenic | 40.0% | |
GATAGAGTAGATGTCCTTAG+TGG | + | chr1.4:50349604-50349623 | None:intergenic | 40.0% | |
GATGGAAGACTACTAGTAGT+AGG | + | chr1.4:50349454-50349473 | None:intergenic | 40.0% | |
GCCAATCCTATTCTTGCATT+TGG | + | chr1.4:50348974-50348993 | None:intergenic | 40.0% | |
GCCCAAATTCCTTGAAAGAT+TGG | + | chr1.4:50347993-50348012 | None:intergenic | 40.0% | |
GCGTGACATCAAAAAGACTA+CGG | + | chr1.4:50347650-50347669 | None:intergenic | 40.0% | |
GCTAGAGAAACTTTGGACAA+AGG | + | chr1.4:50349355-50349374 | None:intergenic | 40.0% | |
GGATTCACATGAATACTGTG+CGG | + | chr1.4:50347127-50347146 | None:intergenic | 40.0% | |
GGGACAACAATTTCATTCTG+TGG | - | chr1.4:50349003-50349022 | MS.gene72414:intron | 40.0% | |
GTTCCTTGTCAATAACCTGA+AGG | + | chr1.4:50347027-50347046 | None:intergenic | 40.0% | |
TAGGACAATGCAAACAACCT+AGG | - | chr1.4:50350583-50350602 | MS.gene72414:CDS | 40.0% | |
TATGCCTAGTGTAGGTTACT+AGG | - | chr1.4:50348427-50348446 | MS.gene72414:CDS | 40.0% | |
TCAGGTTATTGACAAGGAAC+TGG | - | chr1.4:50347027-50347046 | MS.gene72414:intron | 40.0% | |
TCAGTGGCTTGAGATCTATT+GGG | + | chr1.4:50348770-50348789 | None:intergenic | 40.0% | |
TCCGGATCTTTGATCAATCT+GGG | + | chr1.4:50344860-50344879 | None:intergenic | 40.0% | |
TCTAACTCGTCTTTGGTAGA+AGG | + | chr1.4:50349871-50349890 | None:intergenic | 40.0% | |
TCTGGGCAAAGAAATAGTGT+TGG | - | chr1.4:50348103-50348122 | MS.gene72414:intron | 40.0% | |
TCTTTCAAGGAATTTGGGCA+TGG | - | chr1.4:50347994-50348013 | MS.gene72414:intron | 40.0% | |
TGAAAACCCACTGAAGGTAA+TGG | + | chr1.4:50349268-50349287 | None:intergenic | 40.0% | |
TGAAGATGGAGAGACATTTG+CGG | + | chr1.4:50349542-50349561 | None:intergenic | 40.0% | |
TTCAGTGGCTTGAGATCTAT+TGG | + | chr1.4:50348771-50348790 | None:intergenic | 40.0% | |
TTCTCCTAGTAACCTACACT+AGG | + | chr1.4:50348434-50348453 | None:intergenic | 40.0% | |
TTGCACAATGCACAGTACTT+TGG | - | chr1.4:50345845-50345864 | MS.gene72414:CDS | 40.0% | |
TTGCATGATGAAACTGGACT+GGG | - | chr1.4:50347316-50347335 | MS.gene72414:CDS | 40.0% | |
TTTGCATGATGAAACTGGAC+TGG | - | chr1.4:50347315-50347334 | MS.gene72414:CDS | 40.0% | |
! | AAGGTTTGCAAGTGGATTTG+AGG | + | chr1.4:50349686-50349705 | None:intergenic | 40.0% |
! | ATGTTTTACGAGTGTGAGGA+TGG | + | chr1.4:50349129-50349148 | None:intergenic | 40.0% |
! | CTGGAAAAATTCTGAGGAAG+AGG | - | chr1.4:50348216-50348235 | MS.gene72414:intron | 40.0% |
! | GACTTGGAAAGCAGTGATTT+TGG | - | chr1.4:50344983-50345002 | MS.gene72414:CDS | 40.0% |
! | GCATCCTCTTGATTTTTGTC+TGG | + | chr1.4:50350240-50350259 | None:intergenic | 40.0% |
! | GTATCTGAAGTCAAGTGACT+GGG | - | chr1.4:50350146-50350165 | MS.gene72414:intron | 40.0% |
! | TCTGGAACTGAATCATCGAA+TGG | + | chr1.4:50347929-50347948 | None:intergenic | 40.0% |
! | TGATGAGTTGGATAGGAAAC+CGG | - | chr1.4:50348859-50348878 | MS.gene72414:intron | 40.0% |
! | TGGATTTGAGGTATGATTGG+TGG | + | chr1.4:50349674-50349693 | None:intergenic | 40.0% |
! | TTCATACTTTGACGGACAGA+AGG | + | chr1.4:50346962-50346981 | None:intergenic | 40.0% |
! | TTGGAAAGCAGTGATTTTGG+TGG | - | chr1.4:50344986-50345005 | MS.gene72414:CDS | 40.0% |
!! | ATGGGTATTGGAAAACCTGA+TGG | - | chr1.4:50348013-50348032 | MS.gene72414:intron | 40.0% |
!! | CAAGTTGGTAATCATCGGTT+TGG | + | chr1.4:50345092-50345111 | None:intergenic | 40.0% |
!!! | GATGCACTGATGCTTTTTTC+TGG | + | chr1.4:50347947-50347966 | None:intergenic | 40.0% |
!!! | TGAGGTTTTTTCTGCAAAGC+AGG | + | chr1.4:50349565-50349584 | None:intergenic | 40.0% |
AAGATGAGAGACTGTGTCTC+AGG | + | chr1.4:50346859-50346878 | None:intergenic | 45.0% | |
AAGTTCTTCTGCTGTCAGGA+TGG | - | chr1.4:50348931-50348950 | MS.gene72414:intron | 45.0% | |
ACAACCAAGGTCTTACGGTA+AGG | + | chr1.4:50346335-50346354 | None:intergenic | 45.0% | |
AGATGGGAGTGGTCAATACT+TGG | + | chr1.4:50349082-50349101 | None:intergenic | 45.0% | |
AGGAATTTGGGCATGGGTAT+TGG | - | chr1.4:50348001-50348020 | MS.gene72414:intron | 45.0% | |
AGTTCTTCTGCTGTCAGGAT+GGG | - | chr1.4:50348932-50348951 | MS.gene72414:intron | 45.0% | |
ATAGATCCATCCAAGTGACC+CGG | + | chr1.4:50348881-50348900 | None:intergenic | 45.0% | |
ATCATTCTGTCTGAACCGTG+AGG | + | chr1.4:50344960-50344979 | None:intergenic | 45.0% | |
ATGCAAGTTCTTCTGCTGTC+AGG | - | chr1.4:50348927-50348946 | MS.gene72414:intron | 45.0% | |
ATTGGTCGAGCACTCGAATT+CGG | + | chr1.4:50344890-50344909 | None:intergenic | 45.0% | |
CACAGCTCAAAGACAAACCT+CGG | + | chr1.4:50345541-50345560 | None:intergenic | 45.0% | |
CAGCCAACACGAAACATAAC+TGG | - | chr1.4:50348166-50348185 | MS.gene72414:intron | 45.0% | |
CATGGTCCATTACCTTCAGT+GGG | - | chr1.4:50349259-50349278 | MS.gene72414:intron | 45.0% | |
CCACATCATTGCAGCATTTG+CGG | - | chr1.4:50350027-50350046 | MS.gene72414:intron | 45.0% | |
CGTAAGACCTTGGTTGTTAC+TGG | - | chr1.4:50346338-50346357 | MS.gene72414:CDS | 45.0% | |
CTGCTAACATTCGAGGAAGT+TGG | + | chr1.4:50349628-50349647 | None:intergenic | 45.0% | |
GAACCAGACAATGAAGCAAC+AGG | + | chr1.4:50349832-50349851 | None:intergenic | 45.0% | |
GACAGCAGAAGAACTTGCAT+TGG | + | chr1.4:50348927-50348946 | None:intergenic | 45.0% | |
GAGATGTGTTATCCCATCGA+AGG | + | chr1.4:50348511-50348530 | None:intergenic | 45.0% | |
GATTATGGGAAGAGTTGCAG+TGG | - | chr1.4:50345425-50345444 | MS.gene72414:CDS | 45.0% | |
GTAGTTCAGTTATTGGGGTC+CGG | + | chr1.4:50348533-50348552 | None:intergenic | 45.0% | |
GTGTTTCAGGGACCATATCT+GGG | - | chr1.4:50348086-50348105 | MS.gene72414:intron | 45.0% | |
TCAATAACCTGAAGGGTCTG+AGG | + | chr1.4:50347019-50347038 | None:intergenic | 45.0% | |
TCATGGTGTCCGTAACAACT+TGG | - | chr1.4:50348276-50348295 | MS.gene72414:CDS | 45.0% | |
TCGATGGGATAACACATCTC+CGG | - | chr1.4:50348511-50348530 | MS.gene72414:intron | 45.0% | |
TGGAAAACCTGATGGTAGAG+TGG | - | chr1.4:50348021-50348040 | MS.gene72414:intron | 45.0% | |
TGTGCTTATCTTGCCCCATA+TGG | + | chr1.4:50345624-50345643 | None:intergenic | 45.0% | |
TTCCATCTCTATTAGGGGCT+CGG | - | chr1.4:50349467-50349486 | MS.gene72414:intron | 45.0% | |
TTCTGCAAAGCAGGTGAAGA+TGG | + | chr1.4:50349556-50349575 | None:intergenic | 45.0% | |
! | ATGCCTGTTGCTTCATTGTC+TGG | - | chr1.4:50349826-50349845 | MS.gene72414:intron | 45.0% |
! | CCACTAGCTCAAAAGTGCAA+TGG | + | chr1.4:50346036-50346055 | None:intergenic | 45.0% |
! | CCATTGCACTTTTGAGCTAG+TGG | - | chr1.4:50346033-50346052 | MS.gene72414:CDS | 45.0% |
! | GAAGACGAACCATTGATTGC+TGG | + | chr1.4:50347061-50347080 | None:intergenic | 45.0% |
! | GACCCTTCAGGTTATTGACA+AGG | - | chr1.4:50347021-50347040 | MS.gene72414:intron | 45.0% |
! | GACCGCTGATGATGAGAATT+TGG | - | chr1.4:50348312-50348331 | MS.gene72414:CDS | 45.0% |
! | GATGAGTTGGATAGGAAACC+GGG | - | chr1.4:50348860-50348879 | MS.gene72414:intron | 45.0% |
! | GATGGCAGCTTTTGTTCACT+AGG | + | chr1.4:50346641-50346660 | None:intergenic | 45.0% |
! | GCTTTTGTTCACTAGGAACC+TGG | + | chr1.4:50346634-50346653 | None:intergenic | 45.0% |
! | GGTATCTGAAGTCAAGTGAC+TGG | - | chr1.4:50350145-50350164 | MS.gene72414:intron | 45.0% |
! | GTTATCGAGTGTCGTCAAGA+TGG | - | chr1.4:50350464-50350483 | MS.gene72414:CDS | 45.0% |
!! | GAAAGCAGTGATTTTGGTGG+TGG | - | chr1.4:50344989-50345008 | MS.gene72414:CDS | 45.0% |
!! | GCTTTTGTATGACTTGTGCC+TGG | + | chr1.4:50349397-50349416 | None:intergenic | 45.0% |
AAAGCTGCTGCTGGTGTTTC+AGG | - | chr1.4:50348073-50348092 | MS.gene72414:intron | 50.0% | |
AACTTGGCCACTCTACCATC+AGG | + | chr1.4:50348031-50348050 | None:intergenic | 50.0% | |
AAGCTGCTGCTGGTGTTTCA+GGG | - | chr1.4:50348074-50348093 | MS.gene72414:intron | 50.0% | |
AAGTCAAGTGACTGGGTTGC+TGG | - | chr1.4:50350153-50350172 | MS.gene72414:intron | 50.0% | |
ACCAAGGTCTTACGGTAAGG+AGG | + | chr1.4:50346332-50346351 | None:intergenic | 50.0% | |
ACCAGGTCCTCAAAGCGAAT+CGG | + | chr1.4:50345028-50345047 | None:intergenic | 50.0% | |
AGAAAAACCTCAGAGCAGCC+AGG | - | chr1.4:50349376-50349395 | MS.gene72414:intron | 50.0% | |
AGACCTTGGTTGTTACTGGC+AGG | - | chr1.4:50346342-50346361 | MS.gene72414:CDS | 50.0% | |
AGCAACAGGCATAGAGCTAC+TGG | + | chr1.4:50349818-50349837 | None:intergenic | 50.0% | |
ATAACCTGAAGGGTCTGAGG+AGG | + | chr1.4:50347016-50347035 | None:intergenic | 50.0% | |
ATTGCAGGGGAGAATCAAGC+TGG | - | chr1.4:50345118-50345137 | MS.gene72414:CDS | 50.0% | |
CAACGTTGTCTTCTGCCTCA+CGG | - | chr1.4:50344942-50344961 | MS.gene72414:CDS | 50.0% | |
CAATGCTTGTGTGTGCTGTG+TGG | - | chr1.4:50350282-50350301 | MS.gene72414:CDS | 50.0% | |
CACACAGCACACACAAGCAT+TGG | + | chr1.4:50350284-50350303 | None:intergenic | 50.0% | |
CACTCTTATACTGAGCCACC+AGG | + | chr1.4:50345045-50345064 | None:intergenic | 50.0% | |
CCGCAAATGCTGCAATGATG+TGG | + | chr1.4:50350030-50350049 | None:intergenic | 50.0% | |
CTAAGCTCTTCACACGCTGA+AGG | - | chr1.4:50349307-50349326 | MS.gene72414:intron | 50.0% | |
CTAGCCAAGCAACTCTAGCT+TGG | - | chr1.4:50347542-50347561 | MS.gene72414:intron | 50.0% | |
CTCGAATTCGGAGCATGATC+CGG | + | chr1.4:50344878-50344897 | None:intergenic | 50.0% | |
CTCGTGGGATGAAATGAACG+CGG | - | chr1.4:50348243-50348262 | MS.gene72414:CDS | 50.0% | |
CTTCAGCATCTACTGCACTC+AGG | - | chr1.4:50347077-50347096 | MS.gene72414:intron | 50.0% | |
CTTGGCTGAAAACCCACTGA+AGG | + | chr1.4:50349274-50349293 | None:intergenic | 50.0% | |
GAAAGGCTGGACAACCACTA+AGG | - | chr1.4:50349587-50349606 | MS.gene72414:intron | 50.0% | |
GAAATGAACGCGGGATTGAC+TGG | - | chr1.4:50348253-50348272 | MS.gene72414:CDS | 50.0% | |
GAAGAACCTCCTGACTGAGA+AGG | + | chr1.4:50349493-50349512 | None:intergenic | 50.0% | |
GACCTTGGTTGTTACTGGCA+GGG | - | chr1.4:50346343-50346362 | MS.gene72414:CDS | 50.0% | |
GATGGTAGAGTGGCCAAGTT+AGG | - | chr1.4:50348031-50348050 | MS.gene72414:intron | 50.0% | |
GCATGGTCCATTACCTTCAG+TGG | - | chr1.4:50349258-50349277 | MS.gene72414:intron | 50.0% | |
GGAGAATCAAGCTGGTCAGA+AGG | - | chr1.4:50345126-50345145 | MS.gene72414:CDS | 50.0% | |
GGCTTCACTCCAGCAATCAA+TGG | - | chr1.4:50347049-50347068 | MS.gene72414:intron | 50.0% | |
GGTGTTTCAGGGACCATATC+TGG | - | chr1.4:50348085-50348104 | MS.gene72414:intron | 50.0% | |
GGTTGTCCAGCCTTTCTTTG+AGG | + | chr1.4:50349583-50349602 | None:intergenic | 50.0% | |
GTTCTTCTGCTGTCAGGATG+GGG | - | chr1.4:50348933-50348952 | MS.gene72414:intron | 50.0% | |
TCGTCTTTGGTAGAAGGGAG+TGG | + | chr1.4:50349865-50349884 | None:intergenic | 50.0% | |
TCGTGGGATGAAATGAACGC+GGG | - | chr1.4:50348244-50348263 | MS.gene72414:CDS | 50.0% | |
TGGGAGTGGTCAATACTTGG+TGG | + | chr1.4:50349079-50349098 | None:intergenic | 50.0% | |
TGGGATCTGAATCCCCTTCT+GGG | - | chr1.4:50349023-50349042 | MS.gene72414:intron | 50.0% | |
! | AATCGACTCAGCATCTCAGG+CGG | + | chr1.4:50349769-50349788 | None:intergenic | 50.0% |
! | ATTTGGGTGTTGCACGAGCA+TGG | - | chr1.4:50347772-50347791 | MS.gene72414:intron | 50.0% |
! | CGAGTGTCGTCAAGATGGTA+AGG | - | chr1.4:50350469-50350488 | MS.gene72414:CDS | 50.0% |
! | GCAGAAGAACTTGCATTGGC+TGG | + | chr1.4:50348923-50348942 | None:intergenic | 50.0% |
! | TCCAATCGACTCAGCATCTC+AGG | + | chr1.4:50349772-50349791 | None:intergenic | 50.0% |
! | TTTGGGTGTTGCACGAGCAT+GGG | - | chr1.4:50347773-50347792 | MS.gene72414:intron | 50.0% |
!! | CTTCAGTGGGTTTTCAGCCA+AGG | - | chr1.4:50349272-50349291 | MS.gene72414:intron | 50.0% |
!! | GGAGTTGTTGGTGACATGAC+TGG | - | chr1.4:50347705-50347724 | MS.gene72414:CDS | 50.0% |
!! | TGAGGAAGAGGAGTACTCGT+GGG | - | chr1.4:50348228-50348247 | MS.gene72414:intron | 50.0% |
!! | TGGTCAATACTTGGTGGCGA+TGG | + | chr1.4:50349073-50349092 | None:intergenic | 50.0% |
!!! | TGGCTGCTCTGAGGTTTTTC+TGG | + | chr1.4:50349377-50349396 | None:intergenic | 50.0% |
AGGAAACCGGGTCACTTGGA+TGG | - | chr1.4:50348872-50348891 | MS.gene72414:intron | 55.0% | |
AGTAACTGAGACACCAGCCG+AGG | - | chr1.4:50349741-50349760 | MS.gene72414:intron | 55.0% | |
CAAAGGTGACTGCCCAGAAG+GGG | + | chr1.4:50349038-50349057 | None:intergenic | 55.0% | |
CTTTCCTCCTCAGACCCTTC+AGG | - | chr1.4:50347009-50347028 | MS.gene72414:intron | 55.0% | |
CTTTGCTGCCAAACTACCCG+AGG | - | chr1.4:50346715-50346734 | MS.gene72414:intron | 55.0% | |
GATGGAGACCGATGTCGCAA+AGG | + | chr1.4:50349055-50349074 | None:intergenic | 55.0% | |
GCAAAGGTGACTGCCCAGAA+GGG | + | chr1.4:50349039-50349058 | None:intergenic | 55.0% | |
GCCTCCAAGCTAGAGTTGCT+TGG | + | chr1.4:50347549-50347568 | None:intergenic | 55.0% | |
GCCTCCTTACCGTAAGACCT+TGG | - | chr1.4:50346328-50346347 | MS.gene72414:CDS | 55.0% | |
GCCTGAGATGCTGAGTCGAT+TGG | - | chr1.4:50349768-50349787 | MS.gene72414:intron | 55.0% | |
GGATAGGAAACCGGGTCACT+TGG | - | chr1.4:50348868-50348887 | MS.gene72414:intron | 55.0% | |
GGCAGTCACCTTTGCGACAT+CGG | - | chr1.4:50349044-50349063 | MS.gene72414:intron | 55.0% | |
GTGGGATCTGAATCCCCTTC+TGG | - | chr1.4:50349022-50349041 | MS.gene72414:intron | 55.0% | |
TCCTCAAAGCGAATCGGCTG+CGG | + | chr1.4:50345022-50345041 | None:intergenic | 55.0% | |
TGCCCTGCCAGTAACAACCA+AGG | + | chr1.4:50346348-50346367 | None:intergenic | 55.0% | |
TTGTACGGCAAAGCTGCTGC+TGG | - | chr1.4:50348064-50348083 | MS.gene72414:intron | 55.0% | |
! | AACGCGGGATTGACTGGTCA+TGG | - | chr1.4:50348259-50348278 | MS.gene72414:CDS | 55.0% |
! | ATTGGTGGCACCCGATGACT+GGG | + | chr1.4:50349659-50349678 | None:intergenic | 55.0% |
! | GCCAAGCAACTCTAGCTTGG+AGG | - | chr1.4:50347545-50347564 | MS.gene72414:intron | 55.0% |
!! | CTGAGGAAGAGGAGTACTCG+TGG | - | chr1.4:50348227-50348246 | MS.gene72414:intron | 55.0% |
!! | GATTCGCTTTGAGGACCTGG+TGG | - | chr1.4:50345027-50345046 | MS.gene72414:CDS | 55.0% |
!! | TGAGGCGCTGCTAACATTCG+AGG | + | chr1.4:50349635-50349654 | None:intergenic | 55.0% |
ACTTGTGCCTGGCTGCTCTG+AGG | + | chr1.4:50349386-50349405 | None:intergenic | 60.0% | |
AGCGTCTTCAGCAGTCCAGC+AGG | - | chr1.4:50347164-50347183 | MS.gene72414:CDS | 60.0% | |
CGCAAAGGTGACTGCCCAGA+AGG | + | chr1.4:50349040-50349059 | None:intergenic | 60.0% | |
CTTCAGCAGTCCAGCAGGGT+AGG | - | chr1.4:50347169-50347188 | MS.gene72414:CDS | 60.0% | |
GCAGGGCAGCAGCCAGAATA+AGG | - | chr1.4:50346360-50346379 | MS.gene72414:CDS | 60.0% | |
GCGTCTTCAGCAGTCCAGCA+GGG | - | chr1.4:50347165-50347184 | MS.gene72414:CDS | 60.0% | |
GGCCGAGCCCCTAATAGAGA+TGG | + | chr1.4:50349472-50349491 | None:intergenic | 60.0% | |
! | GATTGGTGGCACCCGATGAC+TGG | + | chr1.4:50349660-50349679 | None:intergenic | 60.0% |
! | GGTGTTGCACGAGCATGGGT+GGG | - | chr1.4:50347777-50347796 | MS.gene72414:intron | 60.0% |
!! | GCCGATTCGCTTTGAGGACC+TGG | - | chr1.4:50345024-50345043 | MS.gene72414:CDS | 60.0% |
AGCGCCTCAGCCCAGTCATC+GGG | - | chr1.4:50349646-50349665 | MS.gene72414:intron | 65.0% | |
CAGCATCTCAGGCGGCACCT+CGG | + | chr1.4:50349761-50349780 | None:intergenic | 65.0% | |
CAGCGCCTCAGCCCAGTCAT+CGG | - | chr1.4:50349645-50349664 | MS.gene72414:intron | 65.0% | |
GCTCGGCCTTCTCAGTCAGG+AGG | - | chr1.4:50349484-50349503 | MS.gene72414:intron | 65.0% | |
! | GGGTGTTGCACGAGCATGGG+TGG | - | chr1.4:50347776-50347795 | MS.gene72414:intron | 65.0% |
!! | GCCGCAGCCGATTCGCTTTG+AGG | - | chr1.4:50345018-50345037 | MS.gene72414:CDS | 65.0% |
ATCTCAGGCGGCACCTCGGC+TGG | + | chr1.4:50349757-50349776 | None:intergenic | 70.0% | |
GGCACCCGATGACTGGGCTG+AGG | + | chr1.4:50349653-50349672 | None:intergenic | 70.0% | |
GGGGCTCGGCCTTCTCAGTC+AGG | - | chr1.4:50349481-50349500 | MS.gene72414:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 50344803 | 50350624 | 50344803 | ID=MS.gene72414 |
chr1.4 | mRNA | 50344803 | 50350624 | 50344803 | ID=MS.gene72414.t1;Parent=MS.gene72414 |
chr1.4 | exon | 50350244 | 50350624 | 50350244 | ID=MS.gene72414.t1.exon1;Parent=MS.gene72414.t1 |
chr1.4 | CDS | 50350244 | 50350624 | 50350244 | ID=cds.MS.gene72414.t1;Parent=MS.gene72414.t1 |
chr1.4 | exon | 50348691 | 50348792 | 50348691 | ID=MS.gene72414.t1.exon2;Parent=MS.gene72414.t1 |
chr1.4 | CDS | 50348691 | 50348792 | 50348691 | ID=cds.MS.gene72414.t1;Parent=MS.gene72414.t1 |
chr1.4 | exon | 50348241 | 50348498 | 50348241 | ID=MS.gene72414.t1.exon3;Parent=MS.gene72414.t1 |
chr1.4 | CDS | 50348241 | 50348498 | 50348241 | ID=cds.MS.gene72414.t1;Parent=MS.gene72414.t1 |
chr1.4 | exon | 50347615 | 50347728 | 50347615 | ID=MS.gene72414.t1.exon4;Parent=MS.gene72414.t1 |
chr1.4 | CDS | 50347615 | 50347728 | 50347615 | ID=cds.MS.gene72414.t1;Parent=MS.gene72414.t1 |
chr1.4 | exon | 50347094 | 50347525 | 50347094 | ID=MS.gene72414.t1.exon5;Parent=MS.gene72414.t1 |
chr1.4 | CDS | 50347094 | 50347525 | 50347094 | ID=cds.MS.gene72414.t1;Parent=MS.gene72414.t1 |
chr1.4 | exon | 50344942 | 50346723 | 50344942 | ID=MS.gene72414.t1.exon6;Parent=MS.gene72414.t1 |
chr1.4 | CDS | 50344942 | 50346723 | 50344942 | ID=cds.MS.gene72414.t1;Parent=MS.gene72414.t1 |
chr1.4 | exon | 50344803 | 50344841 | 50344803 | ID=MS.gene72414.t1.exon7;Parent=MS.gene72414.t1 |
chr1.4 | CDS | 50344803 | 50344841 | 50344803 | ID=cds.MS.gene72414.t1;Parent=MS.gene72414.t1 |
Gene Sequence |
Protein sequence |