AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene72501

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72501.t1 MTR_4g036030 95.029 342 15 2 1 340 1 342 0.0 676
MS.gene72501.t1 MTR_4g101680 60.428 374 107 12 1 343 1 364 3.18e-143 409
MS.gene72501.t1 MTR_5g012080 62.236 331 95 12 1 320 1 312 1.14e-136 392
MS.gene72501.t1 MTR_5g021710 55.696 316 101 7 5 307 6 295 1.00e-105 314
MS.gene72501.t1 MTR_8g076110 52.903 310 91 5 5 306 4 266 1.51e-105 312
MS.gene72501.t1 MTR_1g096430 76.282 156 37 0 1 156 1 156 3.38e-88 268
MS.gene72501.t1 MTR_8g024480 46.921 341 133 8 1 304 9 338 1.14e-87 270
MS.gene72501.t1 MTR_2g062730 46.302 311 144 7 7 311 10 303 2.66e-85 261
MS.gene72501.t1 MTR_4g035590 65.946 185 57 3 7 191 8 186 2.10e-80 249
MS.gene72501.t1 MTR_6g084430 50.262 191 89 2 7 194 5 192 9.22e-62 200
MS.gene72501.t1 MTR_2g064090 54.839 155 66 2 7 158 6 159 8.23e-60 196
MS.gene72501.t1 MTR_6g477900 55.921 152 64 2 7 156 6 156 2.58e-59 191
MS.gene72501.t1 MTR_3g435150 58.228 158 57 3 7 159 16 169 2.98e-59 193
MS.gene72501.t1 MTR_4g108760 57.792 154 58 3 7 156 17 167 1.39e-58 193
MS.gene72501.t1 MTR_2g078700 55.280 161 63 3 5 159 21 178 1.02e-57 191
MS.gene72501.t1 MTR_3g064580 54.902 153 65 2 7 156 6 157 1.60e-57 197
MS.gene72501.t1 MTR_1g069805 46.535 202 89 5 5 203 8 193 4.44e-57 186
MS.gene72501.t1 MTR_6g012670 38.983 295 161 8 7 290 20 306 1.88e-56 186
MS.gene72501.t1 MTR_2g064470 47.115 208 92 6 5 203 9 207 3.37e-56 185
MS.gene72501.t1 MTR_8g467490 44.762 210 98 5 9 203 16 222 7.91e-56 187
MS.gene72501.t1 MTR_3g070030 46.117 206 93 5 8 208 20 212 9.55e-56 186
MS.gene72501.t1 MTR_1g008740 56.494 154 60 4 7 156 13 163 2.72e-55 184
MS.gene72501.t1 MTR_1g008740 56.494 154 60 4 7 156 27 177 3.55e-55 184
MS.gene72501.t1 MTR_7g085220 49.701 167 66 3 5 156 6 169 4.06e-55 183
MS.gene72501.t1 MTR_3g109340 53.289 152 66 2 7 156 22 170 1.26e-54 182
MS.gene72501.t1 MTR_7g085260 53.797 158 62 3 7 156 17 171 1.31e-54 183
MS.gene72501.t1 MTR_5g041940 45.098 204 91 5 7 196 3 199 2.09e-54 179
MS.gene72501.t1 MTR_5g076850 54.605 152 66 3 7 156 6 156 2.10e-54 189
MS.gene72501.t1 MTR_4g081870 51.572 159 68 2 5 157 7 162 2.25e-54 179
MS.gene72501.t1 MTR_3g109340 53.595 153 65 3 7 156 22 171 5.21e-54 181
MS.gene72501.t1 MTR_7g011130 53.939 165 56 3 10 157 22 183 1.46e-53 180
MS.gene72501.t1 MTR_7g097090 53.289 152 64 3 5 154 8 154 1.64e-53 178
MS.gene72501.t1 MTR_5g040420 48.256 172 74 3 7 166 14 182 1.65e-53 181
MS.gene72501.t1 MTR_7g005280 54.902 153 61 3 7 157 15 161 3.03e-53 176
MS.gene72501.t1 MTR_3g096920 48.824 170 76 4 7 171 7 170 6.36e-53 176
MS.gene72501.t1 MTR_4g089135 43.627 204 82 5 6 182 14 211 3.63e-52 176
MS.gene72501.t1 MTR_7g011120 54.717 159 58 3 10 157 11 166 5.10e-52 174
MS.gene72501.t1 MTR_8g094580 49.693 163 72 3 1 157 1 159 6.54e-52 173
MS.gene72501.t1 MTR_2g080010 45.503 189 83 5 6 179 14 197 6.63e-52 176
MS.gene72501.t1 MTR_6g011860 48.214 168 72 4 1 156 9 173 8.47e-52 176
MS.gene72501.t1 MTR_5g014300 49.686 159 71 3 5 156 4 160 3.00e-51 173
MS.gene72501.t1 MTR_5g069030 53.503 157 70 3 3 157 21 176 3.79e-51 179
MS.gene72501.t1 MTR_2g079990 50.658 152 70 2 7 156 16 164 3.95e-51 174
MS.gene72501.t1 MTR_3g096140 51.656 151 68 3 9 156 9 157 4.33e-51 171
MS.gene72501.t1 MTR_3g093040 51.250 160 73 3 1 156 100 258 9.98e-51 171
MS.gene72501.t1 MTR_7g100990 42.029 207 107 4 6 204 10 211 1.51e-50 171
MS.gene72501.t1 MTR_3g088110 48.171 164 76 3 1 159 1 160 1.89e-50 170
MS.gene72501.t1 MTR_3g116070 57.463 134 51 3 7 137 23 153 2.17e-50 171
MS.gene72501.t1 MTR_6g032770 49.359 156 70 3 7 156 18 170 2.92e-50 172
MS.gene72501.t1 MTR_3g096140 51.656 151 68 3 9 156 9 157 3.12e-50 171
MS.gene72501.t1 MTR_3g096920 53.061 147 65 2 7 153 7 149 4.74e-50 170
MS.gene72501.t1 MTR_4g098630 49.133 173 77 4 5 167 4 175 5.13e-50 169
MS.gene72501.t1 MTR_2157s0010 46.067 178 79 4 7 170 8 182 3.84e-49 166
MS.gene72501.t1 MTR_8g059170 47.468 158 76 2 7 160 14 168 6.33e-49 167
MS.gene72501.t1 MTR_3g093050 51.282 156 73 3 3 156 18 172 1.11e-48 172
MS.gene72501.t1 MTR_2g093810 49.123 171 70 5 8 168 15 178 1.44e-48 166
MS.gene72501.t1 MTR_3g093050 51.282 156 73 3 3 156 18 172 1.69e-48 172
MS.gene72501.t1 MTR_1g090720 51.266 158 64 4 9 156 44 198 3.52e-48 169
MS.gene72501.t1 MTR_2g068880 45.087 173 75 4 7 161 21 191 2.70e-47 162
MS.gene72501.t1 MTR_2g068920 45.614 171 73 4 7 159 20 188 2.93e-47 162
MS.gene72501.t1 MTR_1g097300 49.333 150 73 2 9 156 21 169 4.25e-47 167
MS.gene72501.t1 MTR_1g090723 49.669 151 72 3 9 156 10 159 7.73e-47 168
MS.gene72501.t1 MTR_0036s0150 50.000 150 72 3 9 156 7 155 1.09e-46 166
MS.gene72501.t1 MTR_5g090970 43.333 180 80 4 7 167 18 194 1.61e-46 160
MS.gene72501.t1 MTR_8g063550 42.697 178 92 5 9 179 8 182 6.42e-46 159
MS.gene72501.t1 MTR_2g079990 43.333 180 69 3 7 156 16 192 6.79e-46 160
MS.gene72501.t1 MTR_4g134460 47.682 151 75 2 7 156 54 201 1.04e-45 161
MS.gene72501.t1 MTR_8g063550 42.697 178 92 5 9 179 8 182 2.36e-45 160
MS.gene72501.t1 MTR_8g063550 42.697 178 92 5 9 179 8 182 2.46e-45 160
MS.gene72501.t1 MTR_5g090970 43.333 180 79 4 7 167 18 193 2.48e-45 157
MS.gene72501.t1 MTR_1g090723 49.669 151 71 4 9 156 10 158 3.42e-45 163
MS.gene72501.t1 MTR_1g090723 49.669 151 71 4 9 156 10 158 4.31e-45 163
MS.gene72501.t1 MTR_4g075980 44.586 157 78 3 9 162 17 167 1.26e-44 155
MS.gene72501.t1 MTR_3g070040 42.233 206 93 5 11 208 12 199 1.31e-44 156
MS.gene72501.t1 MTR_8g093580 42.458 179 93 5 9 180 8 183 1.64e-44 159
MS.gene72501.t1 MTR_2g086880 48.966 145 67 3 9 153 20 157 1.08e-42 155
MS.gene72501.t1 MTR_2g086880 48.966 145 67 3 9 153 20 157 1.37e-42 155
MS.gene72501.t1 MTR_8g099750 47.205 161 71 4 2 153 9 164 2.03e-42 147
MS.gene72501.t1 MTR_3g096140 48.175 137 66 3 23 156 2 136 7.20e-41 146
MS.gene72501.t1 MTR_3g098810 42.857 168 79 4 2 157 9 171 3.10e-39 139
MS.gene72501.t1 MTR_4g052620 44.304 158 74 6 8 154 6 160 7.15e-37 134
MS.gene72501.t1 MTR_3g098810 47.101 138 64 3 2 135 9 141 8.73e-37 130
MS.gene72501.t1 MTR_8g023840 46.203 158 74 6 2 153 3 155 2.92e-36 135
MS.gene72501.t1 MTR_8g023860 45.455 154 76 5 3 153 8 156 1.83e-35 134
MS.gene72501.t1 MTR_7g105170 35.398 226 115 9 6 202 3 226 9.20e-35 128
MS.gene72501.t1 MTR_2g086690 41.509 159 78 6 8 154 5 160 2.40e-33 124
MS.gene72501.t1 MTR_4g094302 38.125 160 78 4 7 156 11 159 1.54e-31 117
MS.gene72501.t1 MTR_8g023900 36.946 203 98 9 7 204 12 189 2.88e-29 117
MS.gene72501.t1 MTR_8g023900 42.667 150 78 5 10 156 196 340 8.89e-28 113
MS.gene72501.t1 MTR_4g094302 41.985 131 63 3 7 135 11 130 3.61e-29 110
MS.gene72501.t1 MTR_8g094580 49.505 101 44 2 63 157 6 105 5.67e-29 112
MS.gene72501.t1 MTR_8g023930 40.523 153 83 5 7 156 24 171 9.58e-28 113
MS.gene72501.t1 MTR_8g023880 38.150 173 81 7 1 156 1 164 5.75e-27 107
MS.gene72501.t1 MTR_8g093790 36.994 173 79 8 7 177 10 154 3.30e-23 95.5
MS.gene72501.t1 MTR_7g070140 49.412 85 40 2 55 137 10 93 5.49e-22 90.5
MS.gene72501.t1 MTR_7g070150 50.769 65 31 1 106 170 8 71 9.79e-17 75.1
MS.gene72501.t1 MTR_7g083330 28.931 159 108 4 7 164 18 172 4.69e-16 75.9
MS.gene72501.t1 MTR_3g096400 30.488 164 89 7 7 155 7 160 1.76e-14 72.0
MS.gene72501.t1 MTR_7g083360 29.412 153 96 6 7 155 10 154 4.14e-14 69.3
MS.gene72501.t1 MTR_4g078875 29.480 173 95 7 1 154 42 206 5.60e-12 65.9
MS.gene72501.t1 MTR_7g083370 28.906 128 86 4 7 133 10 133 6.03e-12 63.2
MS.gene72501.t1 MTR_7g116460 28.659 164 103 7 13 170 11 166 1.56e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72501.t1 AT1G12260 57.412 371 108 11 1 328 1 364 2.31e-134 388
MS.gene72501.t1 AT1G12260 60.303 330 110 9 1 328 1 311 5.26e-130 375
MS.gene72501.t1 AT1G62700 57.735 362 104 13 1 324 1 351 1.55e-129 376
MS.gene72501.t1 AT1G62700 57.735 362 104 13 1 324 1 351 1.55e-129 376
MS.gene72501.t1 AT4G36160 53.571 336 129 8 7 324 10 336 4.44e-111 328
MS.gene72501.t1 AT4G36160 53.571 336 129 8 7 324 10 336 4.44e-111 328
MS.gene72501.t1 AT4G36160 53.571 336 129 8 7 324 14 340 6.34e-111 328
MS.gene72501.t1 AT2G18060 54.154 325 120 9 7 319 9 316 1.30e-108 322
MS.gene72501.t1 AT2G18060 54.154 325 120 9 7 319 9 316 1.30e-108 322
MS.gene72501.t1 AT5G62380 49.565 345 116 8 1 317 1 315 1.94e-105 313
MS.gene72501.t1 AT5G62380 49.565 345 116 8 1 317 1 315 1.94e-105 313
MS.gene72501.t1 AT5G66300 53.289 304 106 6 7 303 12 286 2.84e-102 303
MS.gene72501.t1 AT2G46770 49.245 331 99 11 1 308 10 294 1.09e-87 268
MS.gene72501.t1 AT3G61910 46.041 341 111 9 1 318 5 295 3.44e-85 261
MS.gene72501.t1 AT1G71930 72.727 154 42 0 5 158 7 160 2.68e-84 258
MS.gene72501.t1 AT1G71930 72.727 154 42 0 5 158 7 160 2.68e-84 258
MS.gene72501.t1 AT4G10350 71.242 153 42 1 7 157 9 161 1.72e-79 246
MS.gene72501.t1 AT1G32770 68.639 169 41 1 1 157 10 178 2.40e-79 246
MS.gene72501.t1 AT1G33280 72.185 151 41 1 7 157 8 157 4.55e-79 244
MS.gene72501.t1 AT1G79580 74.342 152 37 2 7 157 17 167 3.55e-78 244
MS.gene72501.t1 AT1G79580 74.342 152 37 2 7 157 17 167 3.55e-78 244
MS.gene72501.t1 AT1G79580 74.342 152 37 2 7 157 17 167 3.55e-78 244
MS.gene72501.t1 AT1G79580 74.342 152 37 2 7 157 17 167 3.55e-78 244
MS.gene72501.t1 AT1G79580 74.342 152 37 2 7 157 17 167 3.55e-78 244
MS.gene72501.t1 AT3G18400 50.739 203 83 6 6 196 4 201 5.65e-62 201
MS.gene72501.t1 AT3G17730 56.579 152 63 2 7 156 6 156 5.18e-60 193
MS.gene72501.t1 AT5G39610 56.548 168 64 4 7 169 20 183 3.11e-59 192
MS.gene72501.t1 AT2G24430 57.325 157 61 3 7 160 16 169 3.48e-59 193
MS.gene72501.t1 AT2G24430 57.325 157 61 3 7 160 16 169 3.48e-59 193
MS.gene72501.t1 AT5G61430 56.774 155 58 3 7 156 16 166 1.56e-58 192
MS.gene72501.t1 AT1G69490 51.829 164 70 2 5 162 7 167 5.48e-58 189
MS.gene72501.t1 AT1G76420 45.887 231 97 9 7 224 22 237 6.56e-58 191
MS.gene72501.t1 AT5G07680 39.929 283 135 10 7 277 3 262 1.44e-57 189
MS.gene72501.t1 AT5G07680 56.129 155 59 3 7 156 17 167 3.21e-57 189
MS.gene72501.t1 AT1G65910 55.263 152 65 2 7 156 6 156 3.67e-57 196
MS.gene72501.t1 AT3G04060 45.755 212 97 6 7 208 20 223 1.31e-56 187
MS.gene72501.t1 AT3G12977 44.811 212 94 4 5 196 16 224 2.11e-56 185
MS.gene72501.t1 AT5G17260 53.548 155 68 2 7 158 6 159 2.27e-56 191
MS.gene72501.t1 AT1G54330 55.696 158 68 2 7 164 6 161 2.48e-56 186
MS.gene72501.t1 AT3G03200 54.194 155 67 2 7 158 6 159 2.83e-56 190
MS.gene72501.t1 AT3G10490 54.194 155 67 2 5 156 25 178 3.13e-56 183
MS.gene72501.t1 AT3G29035 53.659 164 69 2 7 166 24 184 4.46e-56 185
MS.gene72501.t1 AT3G10480 53.503 157 69 2 3 156 23 178 5.48e-56 189
MS.gene72501.t1 AT3G10490 55.629 151 63 2 9 156 29 178 5.05e-55 186
MS.gene72501.t1 AT5G46590 53.571 168 70 5 5 165 4 170 6.62e-55 181
MS.gene72501.t1 AT3G04070 50.602 166 65 3 5 156 8 170 1.06e-54 182
MS.gene72501.t1 AT5G53950 51.786 168 72 3 6 167 16 180 1.62e-54 183
MS.gene72501.t1 AT5G18270 51.807 166 71 5 7 166 21 183 2.63e-54 181
MS.gene72501.t1 AT5G18270 51.807 166 71 5 7 166 21 183 2.83e-54 181
MS.gene72501.t1 AT3G10480 53.503 157 68 3 3 156 23 177 3.94e-54 184
MS.gene72501.t1 AT4G35580 54.487 156 68 2 3 156 5 159 8.02e-54 184
MS.gene72501.t1 AT1G56010 42.326 215 104 5 5 203 17 227 1.06e-53 179
MS.gene72501.t1 AT4G35580 54.487 156 68 2 3 156 5 159 1.10e-53 185
MS.gene72501.t1 AT5G63790 47.283 184 76 4 6 172 59 238 1.13e-53 179
MS.gene72501.t1 AT3G15170 54.430 158 63 3 5 156 18 172 1.19e-53 179
MS.gene72501.t1 AT5G63790 47.283 184 76 4 6 172 49 228 1.23e-53 179
MS.gene72501.t1 AT4G35580 54.487 156 68 2 3 156 5 159 1.31e-53 184
MS.gene72501.t1 AT4G10350 74.074 108 26 1 52 157 7 114 4.95e-53 177
MS.gene72501.t1 AT4G27410 51.316 152 69 2 7 156 14 162 9.78e-53 176
MS.gene72501.t1 AT1G33060 54.605 152 66 3 7 156 24 174 4.01e-52 182
MS.gene72501.t1 AT1G33060 54.605 152 66 3 7 156 24 174 4.05e-52 182
MS.gene72501.t1 AT5G46590 58.088 136 55 2 5 139 4 138 6.61e-52 173
MS.gene72501.t1 AT5G04410 44.041 193 96 6 2 186 4 192 6.76e-52 181
MS.gene72501.t1 AT2G43000 50.968 155 69 4 9 160 20 170 7.70e-52 173
MS.gene72501.t1 AT1G01720 44.565 184 89 4 1 178 1 177 9.57e-52 173
MS.gene72501.t1 AT5G08790 49.398 166 73 4 1 159 1 162 1.54e-51 172
MS.gene72501.t1 AT3G10500 40.271 221 108 6 2 201 4 221 4.26e-51 178
MS.gene72501.t1 AT4G27410 48.193 166 70 3 7 156 14 179 7.51e-51 172
MS.gene72501.t1 AT3G04070 46.703 182 64 4 5 156 8 186 9.41e-51 172
MS.gene72501.t1 AT2G33480 50.000 152 70 1 6 157 14 159 1.05e-50 170
MS.gene72501.t1 AT1G77450 47.024 168 80 3 8 170 11 174 1.07e-50 169
MS.gene72501.t1 AT1G26870 47.093 172 73 4 9 166 18 185 1.14e-50 174
MS.gene72501.t1 AT3G15500 48.718 156 75 2 7 160 14 166 1.51e-50 171
MS.gene72501.t1 AT4G17980 53.165 158 67 5 5 156 4 160 2.03e-50 169
MS.gene72501.t1 AT3G10480 45.745 188 65 4 5 156 25 211 2.06e-50 176
MS.gene72501.t1 AT5G39820 44.571 175 69 3 7 156 20 191 2.60e-50 171
MS.gene72501.t1 AT4G17980 53.165 158 67 5 5 156 4 160 3.45e-50 169
MS.gene72501.t1 AT1G61110 47.590 166 69 3 6 156 15 177 4.08e-50 170
MS.gene72501.t1 AT5G24590 41.704 223 126 4 3 222 9 230 5.46e-50 173
MS.gene72501.t1 AT1G52890 48.718 156 75 2 7 160 14 166 5.64e-50 169
MS.gene72501.t1 AT2G33480 50.000 154 69 2 6 157 14 161 6.15e-50 168
MS.gene72501.t1 AT4G28530 47.953 171 64 5 5 156 8 172 5.12e-49 168
MS.gene72501.t1 AT3G49530 50.318 157 74 4 3 156 9 164 6.00e-49 169
MS.gene72501.t1 AT2G18060 43.210 243 109 9 88 318 2 227 1.23e-48 165
MS.gene72501.t1 AT3G49530 51.634 153 70 4 7 156 13 164 1.48e-48 170
MS.gene72501.t1 AT3G15510 48.447 161 65 4 11 156 21 178 1.17e-46 162
MS.gene72501.t1 AT2G02450 47.682 151 75 2 7 156 51 198 1.68e-46 162
MS.gene72501.t1 AT1G32510 44.324 185 90 4 5 179 4 185 1.74e-46 159
MS.gene72501.t1 AT2G02450 47.682 151 75 2 7 156 51 198 1.82e-46 163
MS.gene72501.t1 AT5G13180 47.170 159 75 4 2 157 9 161 2.22e-46 158
MS.gene72501.t1 AT5G64060 33.824 272 162 7 5 269 4 264 2.51e-46 161
MS.gene72501.t1 AT1G34180 30.000 340 197 12 9 318 18 346 5.49e-46 162
MS.gene72501.t1 AT2G27300 47.059 153 74 3 3 155 10 155 1.72e-45 158
MS.gene72501.t1 AT1G34180 45.333 150 79 2 9 156 18 166 2.52e-45 163
MS.gene72501.t1 AT1G34190 47.682 151 74 3 9 156 18 166 5.80e-45 162
MS.gene72501.t1 AT5G09330 39.196 199 107 6 5 196 4 195 2.79e-44 159
MS.gene72501.t1 AT5G09330 39.196 199 107 6 5 196 4 195 2.79e-44 159
MS.gene72501.t1 AT5G09330 39.196 199 107 6 5 196 4 195 2.79e-44 159
MS.gene72501.t1 AT5G09330 39.196 199 107 6 5 196 4 195 2.79e-44 159
MS.gene72501.t1 AT5G09330 39.196 199 107 6 5 196 4 195 2.79e-44 159
MS.gene72501.t1 AT2G17040 43.312 157 80 4 9 162 8 158 7.46e-44 152
MS.gene72501.t1 AT1G52880 46.707 167 72 3 11 163 21 184 2.70e-43 152
MS.gene72501.t1 AT1G34180 41.615 161 81 2 9 156 18 178 4.98e-43 155
MS.gene72501.t1 AT5G22290 43.791 153 80 2 5 157 19 165 1.06e-42 151
MS.gene72501.t1 AT1G34180 41.615 161 81 2 9 156 18 178 1.73e-42 155
MS.gene72501.t1 AT3G12910 43.605 172 72 5 9 160 23 189 6.46e-42 148
MS.gene72501.t1 AT5G04395 46.053 152 69 3 5 143 26 177 2.60e-41 143
MS.gene72501.t1 AT3G12977 43.636 165 70 4 52 196 10 171 6.52e-39 138
MS.gene72501.t1 AT3G44290 44.800 125 67 1 9 133 16 138 1.49e-38 137
MS.gene72501.t1 AT5G61430 61.616 99 32 2 63 156 6 103 3.20e-38 137
MS.gene72501.t1 AT3G44290 44.800 125 67 1 9 133 16 138 1.11e-37 137
MS.gene72501.t1 AT1G32870 44.156 154 79 3 7 156 10 160 4.82e-37 139
MS.gene72501.t1 AT1G32870 44.156 154 79 3 7 156 10 160 5.75e-37 139
MS.gene72501.t1 AT1G32870 44.156 154 79 3 7 156 46 196 7.59e-37 139
MS.gene72501.t1 AT1G56010 42.857 154 72 3 65 203 8 160 8.91e-37 133
MS.gene72501.t1 AT2G33480 50.000 102 49 1 58 157 3 104 9.08e-31 116
MS.gene72501.t1 AT5G22380 44.275 131 63 5 10 133 8 135 4.40e-29 112
MS.gene72501.t1 AT3G44350 39.103 156 83 8 10 156 8 160 1.83e-27 108
MS.gene72501.t1 AT3G44350 41.221 131 68 5 10 134 8 135 4.99e-27 104
MS.gene72501.t1 AT4G01520 36.424 151 87 5 8 153 5 151 1.34e-26 107
MS.gene72501.t1 AT5G64530 35.088 171 78 5 7 159 3 158 3.63e-26 103
MS.gene72501.t1 AT4G28530 34.911 169 52 4 5 156 8 135 4.09e-26 106
MS.gene72501.t1 AT4G01540 32.979 188 114 6 10 192 7 187 1.57e-25 106
MS.gene72501.t1 AT4G01550 36.842 152 86 5 10 156 7 153 1.69e-25 107
MS.gene72501.t1 AT4G01540 32.979 188 114 6 10 192 7 187 1.71e-25 106
MS.gene72501.t1 AT4G01540 36.242 149 86 5 10 153 7 151 2.73e-25 105
MS.gene72501.t1 AT4G01540 33.333 183 110 6 10 187 7 182 3.55e-25 106
MS.gene72501.t1 AT1G02250 46.565 131 61 5 8 133 4 130 5.30e-25 104
MS.gene72501.t1 AT5G64530 41.221 131 60 4 7 135 3 118 5.62e-25 99.4
MS.gene72501.t1 AT3G04420 42.636 129 69 3 8 133 4 130 7.27e-25 102
MS.gene72501.t1 AT1G02230 45.802 131 62 6 8 133 4 130 7.66e-25 103
MS.gene72501.t1 AT3G04420 42.636 129 69 3 8 133 4 130 2.52e-24 102
MS.gene72501.t1 AT2G43000 48.913 92 43 3 72 160 2 92 8.77e-23 94.7
MS.gene72501.t1 AT3G10490 54.545 77 32 1 83 156 2 78 1.24e-22 97.4
MS.gene72501.t1 AT3G10490 54.545 77 32 1 83 156 2 78 1.24e-22 97.4
MS.gene72501.t1 AT1G02220 40.769 130 69 4 7 133 3 127 5.21e-20 90.5
MS.gene72501.t1 AT1G01010 33.974 156 83 7 10 153 6 153 2.32e-19 89.0
MS.gene72501.t1 AT5G50820 37.410 139 62 6 6 135 16 138 1.98e-18 82.4
MS.gene72501.t1 AT3G56530 28.188 149 103 2 8 154 53 199 4.02e-18 84.3
MS.gene72501.t1 AT5G22290 44.928 69 34 1 89 157 2 66 6.93e-16 76.6
MS.gene72501.t1 AT5G14000 29.771 131 85 2 7 135 15 140 2.57e-14 70.1
MS.gene72501.t1 AT5G14000 27.673 159 107 3 1 157 9 161 2.88e-14 71.2
MS.gene72501.t1 AT3G55210 27.545 167 103 6 2 154 5 167 4.85e-14 72.0
MS.gene72501.t1 AT3G04430 35.075 134 70 6 13 133 6 135 1.22e-11 63.5
MS.gene72501.t1 AT1G28470 27.976 168 91 7 7 154 77 234 9.55e-11 62.4

Find 58 sgRNAs with CRISPR-Local

Find 142 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGATACTTCTTATCTTTA+TGG 0.078281 4.1:+64292451 None:intergenic
AAATATTGAATTCAGAAATT+TGG 0.171231 4.1:-64290774 MS.gene72501:CDS
GAGCAACTGCAGCTGGATTT+TGG 0.212597 4.1:-64292410 MS.gene72501:CDS
GATGTTGTTATTATTCTCTT+TGG 0.215104 4.1:+64290805 None:intergenic
GAAGAAGATTGAACAAGTTT+TGG 0.262525 4.1:+64291037 None:intergenic
TAATTGTTGGTATATCAAAT+TGG 0.305571 4.1:+64291150 None:intergenic
AATTGTCACGAGACATGTTT+TGG 0.317098 4.1:+64291086 None:intergenic
AATAATAACAACATCTTTCA+TGG 0.325007 4.1:-64290797 MS.gene72501:CDS
AGAATTTGAATGATCTATAA+AGG 0.331988 4.1:+64291006 None:intergenic
TTTATAGAGATTTGCAGAAT+AGG 0.359693 4.1:-64292507 MS.gene72501:intron
AGTTTCATTCATGCAAGATA+TGG 0.366915 4.1:-64291197 MS.gene72501:CDS
TATAGTAAACATAATTTGAT+AGG 0.375654 4.1:-64292360 MS.gene72501:CDS
AGGCTTGAAACCGATGAAAA+TGG 0.386369 4.1:-64292261 MS.gene72501:CDS
AAAGATAAGAAGTATCCAAC+TGG 0.410251 4.1:-64292447 MS.gene72501:CDS
CTATTTGTTCTTGTCCCAGT+TGG 0.412869 4.1:+64292432 None:intergenic
GATAGGAATGAGGAAAACTT+TGG 0.414183 4.1:-64292343 MS.gene72501:CDS
TTGGATTGAGAGGTTTGATT+TGG 0.418823 4.1:+64291169 None:intergenic
ATGCCTCTACATCAAATTTG+TGG 0.442473 4.1:-64290724 MS.gene72501:CDS
ACAAATAGAGCAACTGCAGC+TGG 0.455592 4.1:-64292417 MS.gene72501:CDS
TTTGTTGATTACCACTATGT+AGG 0.459833 4.1:+64290945 None:intergenic
TACGGTTTGGAGCAGGAAGA+AGG 0.480591 4.1:-64291310 MS.gene72501:intron
TTCCAATGTTGAACAAGGTA+TGG 0.483739 4.1:-64290897 MS.gene72501:CDS
TGGGATGGAACCTAAAACCC+GGG 0.486673 4.1:+64293030 None:intergenic
ATTGGATAATGCATGAGTAT+AGG 0.487765 4.1:-64292281 MS.gene72501:CDS
CCTTTACAAAATTGAACCAT+GGG 0.489236 4.1:-64292925 MS.gene72501:CDS
AACCATACCTTGTTCAACAT+TGG 0.489325 4.1:+64290895 None:intergenic
GGAAGAAAATTGCATCAAGA+AGG 0.492349 4.1:-64292977 MS.gene72501:CDS
GTGAGCATGACTCTCCTTGT+TGG 0.496787 4.1:-64291231 MS.gene72501:CDS
CCAATGGACAAAAGTCAGAT+TGG 0.499786 4.1:-64292299 MS.gene72501:CDS
ATTGAACCATGGGATCTTGA+AGG 0.503378 4.1:-64292915 MS.gene72501:intron
TTGATGATCAAGTTACTGAT+TGG 0.505048 4.1:-64290874 MS.gene72501:CDS
TTTCCACAAATTTGATGTAG+AGG 0.516903 4.1:+64290721 None:intergenic
TCTTGTAAGAGCATTGATGA+AGG 0.521483 4.1:+64290977 None:intergenic
AAATTTGGAGAAACAAGAAA+TGG 0.525812 4.1:-64290759 MS.gene72501:CDS
AAGGAAATGATGGTAATTGT+TGG 0.530732 4.1:+64291137 None:intergenic
ATCCACAAGTTCCTCATCTG+TGG 0.539226 4.1:+64293010 None:intergenic
TCCCACAGATGAGGAACTTG+TGG 0.541887 4.1:-64293012 MS.gene72501:CDS
AACATAATTTGATAGGAATG+AGG 0.544431 4.1:-64292353 MS.gene72501:CDS
GTATATCAAATTGGATTGAG+AGG 0.548657 4.1:+64291159 None:intergenic
ACCTTTACAAAATTGAACCA+TGG 0.552414 4.1:-64292926 MS.gene72501:CDS
AACTTGTGGATTATTACCTT+AGG 0.553466 4.1:-64292998 MS.gene72501:CDS
CTTATACCTTCAAGATCCCA+TGG 0.563913 4.1:+64292909 None:intergenic
TATCTTGCATGAATGAAACT+TGG 0.567119 4.1:+64291200 None:intergenic
TCCACAAGTTCCTCATCTGT+GGG 0.579135 4.1:+64293011 None:intergenic
GTTTGGAGCAGGAAGAAGGA+TGG 0.579506 4.1:-64291306 MS.gene72501:intron
CAAGTTCCTCATCTGTGGGA+TGG 0.581878 4.1:+64293015 None:intergenic
TTTGGAGCAGGAAGAAGGAT+GGG 0.584622 4.1:-64291305 MS.gene72501:intron
CGATGAAAATGGCACACCAC+AGG 0.585032 4.1:-64292250 MS.gene72501:intron
TAGGTTCCATCCCACAGATG+AGG 0.593025 4.1:-64293021 MS.gene72501:CDS
GAAGAACAAGTCCTACATAG+TGG 0.604430 4.1:-64290956 MS.gene72501:CDS
TATAAAGGTCGAGCTCCCAA+TGG 0.627931 4.1:-64292315 MS.gene72501:CDS
GTGGGATGGAACCTAAAACC+CGG 0.629055 4.1:+64293029 None:intergenic
AACAATTCCAATGTTGAACA+AGG 0.643045 4.1:-64290902 MS.gene72501:CDS
GAACAGAAGAACAAAATGAG+TGG 0.656792 4.1:-64292485 MS.gene72501:CDS
AAGATAAGAAGTATCCAACT+GGG 0.681306 4.1:-64292446 MS.gene72501:CDS
ACTTGGTCATCATACCAACA+AGG 0.714421 4.1:+64291217 None:intergenic
GGGATGGAACCTAAAACCCG+GGG 0.741011 4.1:+64293031 None:intergenic
GGATGGAACCTAAAACCCGG+GGG 0.806199 4.1:+64293032 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCAAAAAAGAAAAAAAAA+AGG + chr4.1:64291245-64291264 None:intergenic 10.0%
!! AAATATTGAATTCAGAAATT+TGG - chr4.1:64292997-64293016 MS.gene72501:CDS 15.0%
!! TATAGTAAACATAATTTGAT+AGG - chr4.1:64291411-64291430 MS.gene72501:intron 15.0%
!! TCTGAATATATATTTATAAG+TGG + chr4.1:64291993-64292012 None:intergenic 15.0%
!! AAAATAATTTGATACTGAAG+CGG + chr4.1:64291106-64291125 None:intergenic 20.0%
!! AATAATAACAACATCTTTCA+TGG - chr4.1:64292974-64292993 MS.gene72501:CDS 20.0%
!! AGAATTTGAATGATCTATAA+AGG + chr4.1:64292768-64292787 None:intergenic 20.0%
!! AGTTAAAATTGTAATTGCTA+TGG - chr4.1:64292087-64292106 MS.gene72501:intron 20.0%
!! TAATTGTTGGTATATCAAAT+TGG + chr4.1:64292624-64292643 None:intergenic 20.0%
!! TATAGACAAATGTATGTTAT+AGG - chr4.1:64292257-64292276 MS.gene72501:CDS 20.0%
!!! AAAACTTTGGTGTTTTATAA+AGG - chr4.1:64291441-64291460 MS.gene72501:intron 20.0%
!!! AAATAGTGAACTTTTTTTGT+AGG + chr4.1:64291078-64291097 None:intergenic 20.0%
!!! CTAACATTTGTTATTTTCTA+CGG - chr4.1:64292443-64292462 MS.gene72501:CDS 20.0%
!!! TTATTTTTCAGTTTCTTAGT+AGG - chr4.1:64291119-64291138 MS.gene72501:CDS 20.0%
! AAATTTGGAGAAACAAGAAA+TGG - chr4.1:64293012-64293031 MS.gene72501:CDS 25.0%
! AACATAATTTGATAGGAATG+AGG - chr4.1:64291418-64291437 MS.gene72501:intron 25.0%
! AACATACACAACAAAATATG+AGG - chr4.1:64292112-64292131 MS.gene72501:intron 25.0%
! ATCGACAACAATAACAATTA+GGG + chr4.1:64292194-64292213 None:intergenic 25.0%
! GATAAATTTGTGTTAACTCT+TGG - chr4.1:64292228-64292247 MS.gene72501:intron 25.0%
! GTAATTCTCATTTCACAAAT+CGG + chr4.1:64291967-64291986 None:intergenic 25.0%
! TCTCTAGATTTATTTAACGT+TGG - chr4.1:64291584-64291603 MS.gene72501:intron 25.0%
! TTAATGAAATAACTTACCTG+TGG + chr4.1:64291540-64291559 None:intergenic 25.0%
! TTGGATACTTCTTATCTTTA+TGG + chr4.1:64291323-64291342 None:intergenic 25.0%
! TTTATAGAGATTTGCAGAAT+AGG - chr4.1:64291264-64291283 MS.gene72501:CDS 25.0%
!! AACAATAACAATTAGGGTTT+TGG + chr4.1:64292188-64292207 None:intergenic 25.0%
!! GATGTTGTTATTATTCTCTT+TGG + chr4.1:64292969-64292988 None:intergenic 25.0%
!! TTTGGAGTAATATCAAAGTT+TGG + chr4.1:64290938-64290957 None:intergenic 25.0%
!!! ACAAATGTGTTAGTTTTCTA+AGG + chr4.1:64292386-64292405 None:intergenic 25.0%
!!! AGACATTAAGAGTATTAAGA+AGG + chr4.1:64292341-64292360 None:intergenic 25.0%
!!! ATGTTATAGGTTAGTTTGTA+CGG - chr4.1:64292270-64292289 MS.gene72501:CDS 25.0%
!!! ATTTGTTATTTTCTACGGTT+TGG - chr4.1:64292448-64292467 MS.gene72501:CDS 25.0%
AACAATTCCAATGTTGAACA+AGG - chr4.1:64292869-64292888 MS.gene72501:intron 30.0%
AAGGAAATGATGGTAATTGT+TGG + chr4.1:64292637-64292656 None:intergenic 30.0%
ACAAATATCATCTTCGTGTT+TGG - chr4.1:64291914-64291933 MS.gene72501:intron 30.0%
ACCTTTACAAAATTGAACCA+TGG - chr4.1:64290845-64290864 MS.gene72501:CDS 30.0%
AGTTTCATTCATGCAAGATA+TGG - chr4.1:64292574-64292593 MS.gene72501:intron 30.0%
ATTGGATAATGCATGAGTAT+AGG - chr4.1:64291490-64291509 MS.gene72501:intron 30.0%
CCTTTACAAAATTGAACCAT+GGG - chr4.1:64290846-64290865 MS.gene72501:CDS 30.0%
GATCGACAACAATAACAATT+AGG + chr4.1:64292195-64292214 None:intergenic 30.0%
GATTGTATTTATGTGCAGTT+TGG + chr4.1:64290956-64290975 None:intergenic 30.0%
GTATATCAAATTGGATTGAG+AGG + chr4.1:64292615-64292634 None:intergenic 30.0%
GTGTTTATCCAACATTCATT+GGG + chr4.1:64291896-64291915 None:intergenic 30.0%
TATCTTGCATGAATGAAACT+TGG + chr4.1:64292574-64292593 None:intergenic 30.0%
TGTAGGACTACAATATAAGT+GGG + chr4.1:64291061-64291080 None:intergenic 30.0%
TGTGTTTATCCAACATTCAT+TGG + chr4.1:64291897-64291916 None:intergenic 30.0%
TTGTAGGACTACAATATAAG+TGG + chr4.1:64291062-64291081 None:intergenic 30.0%
TTTCCACAAATTTGATGTAG+AGG + chr4.1:64293053-64293072 None:intergenic 30.0%
! AACTTGTGGATTATTACCTT+AGG - chr4.1:64290773-64290792 MS.gene72501:CDS 30.0%
! GAAGAAGATTGAACAAGTTT+TGG + chr4.1:64292737-64292756 None:intergenic 30.0%
! TATCAAAGTTTGGAGCATAA+TGG + chr4.1:64290928-64290947 None:intergenic 30.0%
! TTGATGATCAAGTTACTGAT+TGG - chr4.1:64292897-64292916 MS.gene72501:intron 30.0%
! TTGATGCAATTTTCTTCCTA+AGG + chr4.1:64290792-64290811 None:intergenic 30.0%
! TTTGTTGATTACCACTATGT+AGG + chr4.1:64292829-64292848 None:intergenic 30.0%
!! AAAGATAAGAAGTATCCAAC+TGG - chr4.1:64291324-64291343 MS.gene72501:intron 30.0%
!! AAGATAAGAAGTATCCAACT+GGG - chr4.1:64291325-64291344 MS.gene72501:intron 30.0%
!! TTCACAAATCGGTTTTGTAA+TGG + chr4.1:64291956-64291975 None:intergenic 30.0%
!!! ACCTTACAAGTTCACTTTTT+AGG + chr4.1:64291730-64291749 None:intergenic 30.0%
!!! CCTTACAAGTTCACTTTTTA+GGG + chr4.1:64291729-64291748 None:intergenic 30.0%
!!! CTTACAAGTTCACTTTTTAG+GGG + chr4.1:64291728-64291747 None:intergenic 30.0%
!!! TCTTTTTTGCAAGGAAATGA+TGG + chr4.1:64292647-64292666 None:intergenic 30.0%
!!! TTATCTAGCTCTTTTTTGCA+AGG + chr4.1:64292656-64292675 None:intergenic 30.0%
AACCATACCTTGTTCAACAT+TGG + chr4.1:64292879-64292898 None:intergenic 35.0%
ATGAGGCATAATAAACCTTG+AGG - chr4.1:64292129-64292148 MS.gene72501:intron 35.0%
ATGCCTCTACATCAAATTTG+TGG - chr4.1:64293047-64293066 MS.gene72501:CDS 35.0%
CCCTAAAAAGTGAACTTGTA+AGG - chr4.1:64291726-64291745 MS.gene72501:intron 35.0%
GAACAGAAGAACAAAATGAG+TGG - chr4.1:64291286-64291305 MS.gene72501:CDS 35.0%
GAAGTTCAAAGTTCGATTGA+TGG + chr4.1:64292319-64292338 None:intergenic 35.0%
GATAGGAATGAGGAAAACTT+TGG - chr4.1:64291428-64291447 MS.gene72501:intron 35.0%
GCAATAGATAAGTCGAACAT+TGG + chr4.1:64292027-64292046 None:intergenic 35.0%
GGAAGAAAATTGCATCAAGA+AGG - chr4.1:64290794-64290813 MS.gene72501:CDS 35.0%
GGACATTACGTAATATATGC+AGG - chr4.1:64291011-64291030 MS.gene72501:CDS 35.0%
TTCCAATGTTGAACAAGGTA+TGG - chr4.1:64292874-64292893 MS.gene72501:intron 35.0%
TTGGATTGAGAGGTTTGATT+TGG + chr4.1:64292605-64292624 None:intergenic 35.0%
! AAGAGTTTCGCCAAAAGTAT+CGG - chr4.1:64291671-64291690 MS.gene72501:intron 35.0%
! AATTGTCACGAGACATGTTT+TGG + chr4.1:64292688-64292707 None:intergenic 35.0%
! CAATCTGACTTTTGTCCATT+GGG + chr4.1:64291474-64291493 None:intergenic 35.0%
! CCCATGGTTCAATTTTGTAA+AGG + chr4.1:64290849-64290868 None:intergenic 35.0%
! GTTTCAAACTCCGATACTTT+TGG + chr4.1:64291684-64291703 None:intergenic 35.0%
!! TCTTGTAAGAGCATTGATGA+AGG + chr4.1:64292797-64292816 None:intergenic 35.0%
!!! AAGTTCACTTTTTAGGGGTT+GGG + chr4.1:64291723-64291742 None:intergenic 35.0%
!!! TTTTCTAAGGCGTAGTACAA+TGG + chr4.1:64292373-64292392 None:intergenic 35.0%
AAGAGTGACCCAATGAATGT+TGG - chr4.1:64291885-64291904 MS.gene72501:intron 40.0%
ACTTGGTCATCATACCAACA+AGG + chr4.1:64292557-64292576 None:intergenic 40.0%
AGGCTTGAAACCGATGAAAA+TGG - chr4.1:64291510-64291529 MS.gene72501:intron 40.0%
ATTGAACCATGGGATCTTGA+AGG - chr4.1:64290856-64290875 MS.gene72501:CDS 40.0%
CATTCCAAACGTCCAATCTT+AGG + chr4.1:64291832-64291851 None:intergenic 40.0%
CCAATGGACAAAAGTCAGAT+TGG - chr4.1:64291472-64291491 MS.gene72501:intron 40.0%
CTATTTGTTCTTGTCCCAGT+TGG + chr4.1:64291342-64291361 None:intergenic 40.0%
CTTATACCTTCAAGATCCCA+TGG + chr4.1:64290865-64290884 None:intergenic 40.0%
GAAGAACAAGTCCTACATAG+TGG - chr4.1:64292815-64292834 MS.gene72501:intron 40.0%
GAGCATAATGGCAACAACAA+CGG + chr4.1:64290916-64290935 None:intergenic 40.0%
GGAAAAAGTTCCAAGACTCT+TGG + chr4.1:64292167-64292186 None:intergenic 40.0%
GTAATCTAAGCCAAGAGTCT+TGG - chr4.1:64292154-64292173 MS.gene72501:intron 40.0%
TAAGGCGTAGTACAATGGTA+TGG + chr4.1:64292368-64292387 None:intergenic 40.0%
TGGCTTAGATTACATCCTCA+AGG + chr4.1:64292147-64292166 None:intergenic 40.0%
! CCAATCTGACTTTTGTCCAT+TGG + chr4.1:64291475-64291494 None:intergenic 40.0%
!! ACAATATAAGTGGGTTGTCC+AGG + chr4.1:64291052-64291071 None:intergenic 40.0%
!! CAATATAAGTGGGTTGTCCA+GGG + chr4.1:64291051-64291070 None:intergenic 40.0%
!! GTTTGGAATGTGACTTGGTT+GGG - chr4.1:64291842-64291861 MS.gene72501:intron 40.0%
!! TATTTTCTACGGTTTGGAGC+AGG - chr4.1:64292454-64292473 MS.gene72501:CDS 40.0%
!!! AGTTTTGGACTCTCTAGAAG+TGG + chr4.1:64292722-64292741 None:intergenic 40.0%
!!! CAAGTTCACTTTTTAGGGGT+TGG + chr4.1:64291724-64291743 None:intergenic 40.0%
!!! CACGAGACATGTTTTGGAAT+GGG + chr4.1:64292682-64292701 None:intergenic 40.0%
!!! GATGTAGAGGCATTTTCATG+AGG + chr4.1:64293040-64293059 None:intergenic 40.0%
!!! TACTTTTTCTCATGTTCCCC+CGG - chr4.1:64290723-64290742 MS.gene72501:CDS 40.0%
!!! TCACGAGACATGTTTTGGAA+TGG + chr4.1:64292683-64292702 None:intergenic 40.0%
ACAAATAGAGCAACTGCAGC+TGG - chr4.1:64291354-64291373 MS.gene72501:intron 45.0%
ATCCACAAGTTCCTCATCTG+TGG + chr4.1:64290764-64290783 None:intergenic 45.0%
TATAAAGGTCGAGCTCCCAA+TGG - chr4.1:64291456-64291475 MS.gene72501:intron 45.0%
TCCACAAGTTCCTCATCTGT+GGG + chr4.1:64290763-64290782 None:intergenic 45.0%
TCTCATGTGTGTAGCTCAGT+TGG - chr4.1:64290985-64291004 MS.gene72501:CDS 45.0%
! TGGACGTTTGGAATGTGACT+TGG - chr4.1:64291837-64291856 MS.gene72501:intron 45.0%
! TTTGGAGCAGGAAGAAGGAT+GGG - chr4.1:64292466-64292485 MS.gene72501:CDS 45.0%
!! ACTTTTTCTCATGTTCCCCC+GGG - chr4.1:64290724-64290743 MS.gene72501:CDS 45.0%
!! CACTTTTTAGGGGTTGGGTT+AGG + chr4.1:64291718-64291737 None:intergenic 45.0%
!! CGTTTGGAATGTGACTTGGT+TGG - chr4.1:64291841-64291860 MS.gene72501:intron 45.0%
!! GCTGGATTTTGGAAAGCAAC+AGG - chr4.1:64291372-64291391 MS.gene72501:intron 45.0%
!! TGGGCTAGTACTGGTAACAT+GGG - chr4.1:64291861-64291880 MS.gene72501:intron 45.0%
!! TTGGGCTAGTACTGGTAACA+TGG - chr4.1:64291860-64291879 MS.gene72501:intron 45.0%
!!! CTGTGGTGTGCCATTTTCAT+CGG + chr4.1:64291523-64291542 None:intergenic 45.0%
ACACCACTCACGCCTAAGAT+TGG - chr4.1:64291817-64291836 MS.gene72501:intron 50.0%
CAAGTTCCTCATCTGTGGGA+TGG + chr4.1:64290759-64290778 None:intergenic 50.0%
CACGCCTAAGATTGGACGTT+TGG - chr4.1:64291825-64291844 MS.gene72501:intron 50.0%
CGATGAAAATGGCACACCAC+AGG - chr4.1:64291521-64291540 MS.gene72501:intron 50.0%
GTGAGCATGACTCTCCTTGT+TGG - chr4.1:64292540-64292559 MS.gene72501:intron 50.0%
GTGGGATGGAACCTAAAACC+CGG + chr4.1:64290745-64290764 None:intergenic 50.0%
TAGGTTCCATCCCACAGATG+AGG - chr4.1:64290750-64290769 MS.gene72501:CDS 50.0%
TCCCACAGATGAGGAACTTG+TGG - chr4.1:64290759-64290778 MS.gene72501:CDS 50.0%
TGGGATGGAACCTAAAACCC+GGG + chr4.1:64290744-64290763 None:intergenic 50.0%
TGTGTGTAGCTCAGTTGGCA+TGG - chr4.1:64290990-64291009 MS.gene72501:CDS 50.0%
! CGTAATATATGCAGGCGTCG+TGG - chr4.1:64291019-64291038 MS.gene72501:CDS 50.0%
! GAGCAACTGCAGCTGGATTT+TGG - chr4.1:64291361-64291380 MS.gene72501:intron 50.0%
! GTTGGGTTAGGCTCAACTCA+TGG + chr4.1:64291706-64291725 None:intergenic 50.0%
! GTTTGGAGCAGGAAGAAGGA+TGG - chr4.1:64292465-64292484 MS.gene72501:CDS 50.0%
! TACGGTTTGGAGCAGGAAGA+AGG - chr4.1:64292461-64292480 MS.gene72501:CDS 50.0%
!! TGACTTGGTTGGGCTAGTAC+TGG - chr4.1:64291852-64291871 MS.gene72501:intron 50.0%
CGTCCAATCTTAGGCGTGAG+TGG + chr4.1:64291823-64291842 None:intergenic 55.0%
GCGTGAGTGGTGTGTGTTGA+AGG + chr4.1:64291810-64291829 None:intergenic 55.0%
GGATGGAACCTAAAACCCGG+GGG + chr4.1:64290742-64290761 None:intergenic 55.0%
GGGATGGAACCTAAAACCCG+GGG + chr4.1:64290743-64290762 None:intergenic 55.0%
! CTCATGTTCCCCCGGGTTTT+AGG - chr4.1:64290731-64290750 MS.gene72501:CDS 55.0%
! AGGCGTCGTGGTTCGAACCC+TGG - chr4.1:64291031-64291050 MS.gene72501:CDS 65.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 64290718 64293075 64290718 ID=MS.gene72501
chr4.1 mRNA 64290718 64293075 64290718 ID=MS.gene72501.t1;Parent=MS.gene72501
chr4.1 exon 64292916 64293075 64292916 ID=MS.gene72501.t1.exon1;Parent=MS.gene72501.t1
chr4.1 CDS 64292916 64293075 64292916 ID=cds.MS.gene72501.t1;Parent=MS.gene72501.t1
chr4.1 exon 64292251 64292522 64292251 ID=MS.gene72501.t1.exon2;Parent=MS.gene72501.t1
chr4.1 CDS 64292251 64292522 64292251 ID=cds.MS.gene72501.t1;Parent=MS.gene72501.t1
chr4.1 exon 64290718 64291317 64290718 ID=MS.gene72501.t1.exon3;Parent=MS.gene72501.t1
chr4.1 CDS 64290718 64291317 64290718 ID=cds.MS.gene72501.t1;Parent=MS.gene72501.t1
Gene Sequence

>MS.gene72501

ATGAATACTTTTTCTCATGTTCCCCCGGGTTTTAGGTTCCATCCCACAGATGAGGAACTTGTGGATTATTACCTTAGGAAGAAAATTGCATCAAGAAGGATTGATCTTGATGTCATAAAAGATGTTGACCTTTACAAAATTGAACCATGGGATCTTGAAGGTATAAGATATAACATTGTTTCGAAATTGTAGTTACCGTTGTTGTTGCCATTATGCTCCAAACTTTGATATTACTCCAAACTGCACATAAATACAATCAATATGCATTCTCATGTGTGTAGCTCAGTTGGCATGGACATTACGTAATATATGCAGGCGTCGTGGTTCGAACCCTGGACAACCCACTTATATTGTAGTCCTACAAAAAAAGTTCACTATTTAGTGACCGCTTCAGTATCAAATTATTTTTCAGTTTCTTAGTAGGTCTCTAATTTCAATTGCTATGTGACAATTTTATTTTTAACAAAATAAGACAATCTTTTTAAGTTTGTGATCGATATATTTTTAACTTGTGATCAATAATTCCTTTTTTTTTTCTTTTTTGAATTTATAGAGATTTGCAGAATAGGAACAGAAGAACAAAATGAGTGGTATTTTTTTAGCCATAAAGATAAGAAGTATCCAACTGGGACAAGAACAAATAGAGCAACTGCAGCTGGATTTTGGAAAGCAACAGGAAGAGACAAATCAATCTATAGTAAACATAATTTGATAGGAATGAGGAAAACTTTGGTGTTTTATAAAGGTCGAGCTCCCAATGGACAAAAGTCAGATTGGATAATGCATGAGTATAGGCTTGAAACCGATGAAAATGGCACACCACAGGTAAGTTATTTCATTAAGCATTTGAAAGAAAAAACTTCAATTCTCTAGATTTATTTAACGTTGGTTAGTTCAAAATTTCTTTATGATTCATTTATATGTGTATAATTAGCTTAAATACATACACGAAAAAGAGTTTCGCCAAAAGTATCGGAGTTTGAAACCATGAGTTGAGCCTAACCCAACCCCTAAAAAGTGAACTTGTAAGGTAATGATTATACATCACTTACAAACATATTTTAATGTTTTATCTAATTGAATACGAGACCTTCAACACACACCACTCACGCCTAAGATTGGACGTTTGGAATGTGACTTGGTTGGGCTAGTACTGGTAACATGGGAAAGAGTGACCCAATGAATGTTGGATAAACACAAATATCATCTTCGTGTTTGGATTGTGTCTTAATCAACCATTACAAAACCGATTTGTGAAATGAGAATTACGCACCACTTATAAATATATATTCAGATCTTATGTCATCCAATGTTCGACTTATCTATTGCGTAATGAGTAGAAAATAATTAACATTATTGTTATCATATTAGTTAAAATTGTAATTGCTATGGCAAACATACACAACAAAATATGAGGCATAATAAACCTTGAGGATGTAATCTAAGCCAAGAGTCTTGGAACTTTTTCCAAAACCCTAATTGTTATTGTTGTCGATCGAAAGCTCTAATTGATAAATTTGTGTTAACTCTTGGTTTCGTTATAGACAAATGTATGTTATAGGTTAGTTTGTACGGCTCGAGAAGAATGTGTTATAGCACCATCAATCGAACTTTGAACTTCCTTCTTAATACTCTTAATGTCTCAATCCATACCATTGTACTACGCCTTAGAAAACTAACACATTTGTTATTTTGATGAATTTATTTTTTAACTCTTTCTATAAACTAACATTTGTTATTTTCTACGGTTTGGAGCAGGAAGAAGGATGGGTTGTATGTAGAGTATTCAAGAAGAGAGTAACAACAACAATTCGCAAAATGAGTGAGCATGACTCTCCTTGTTGGTATGATGACCAAGTTTCATTCATGCAAGATATGGACTCACCAAATCAAACCTCTCAATCCAATTTGATATACCAACAATTACCATCATTTCCTTGCAAAAAAGAGCTAGATAATTTCCCATTCCAAAACATGTCTCGTGACAATTATCTTAATCTTCCACTTCTAGAGAGTCCAAAACTTGTTCAATCTTCTTCAAACATAACCTTTATAGATCATTCAAATTCTATGTTTCCTTCATCAATGCTCTTACAAGAAGAACAAGTCCTACATAGTGGTAATCAACAAAACTTTCATGCTATGTATGAAAACAATTCCAATGTTGAACAAGGTATGGTTGATGATCAAGTTACTGATTGGAGAGTTCTTGACAAGTTTGTTGCTTCACAACTTAGTCAAGATGCATCCAAAGAGAATAATAACAACATCTTTCATGGAAATATTGAATTCAGAAATTTGGAGAAACAAGAAATGGTGCCTCATGAAAATGCCTCTACATCAAATTTGTGGAAATAG
Protein sequence

>MS.gene72501.t1

MNTFSHVPPGFRFHPTDEELVDYYLRKKIASRRIDLDVIKDVDLYKIEPWDLEEICRIGTEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKSIYSKHNLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRVTTTIRKMSEHDSPCWYDDQVSFMQDMDSPNQTSQSNLIYQQLPSFPCKKELDNFPFQNMSRDNYLNLPLLESPKLVQSSSNITFIDHSNSMFPSSMLLQEEQVLHSGNQQNFHAMYENNSNVEQGMVDDQVTDWRVLDKFVASQLSQDASKENNNNIFHGNIEFRNLEKQEMVPHENASTSNLWK