Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72502.t1 | XP_013455352.1 | 94.7 | 188 | 8 | 1 | 1 | 186 | 1 | 188 | 2.40E-92 | 348.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72502.t1 | Q38841 | 56.2 | 210 | 67 | 5 | 1 | 185 | 1 | 210 | 8.3e-54 | 211.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72502.t1 | A0A072UK08 | 94.7 | 188 | 8 | 1 | 1 | 186 | 1 | 188 | 1.7e-92 | 348.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene72502.t1 | TF | MADS-MIKC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72502.t1 | MTR_4g036050 | 94.681 | 188 | 8 | 1 | 1 | 186 | 1 | 188 | 3.56e-130 | 363 |
MS.gene72502.t1 | MTR_4g036050 | 88.119 | 202 | 8 | 2 | 1 | 186 | 1 | 202 | 2.26e-126 | 354 |
MS.gene72502.t1 | MTR_4g036050 | 88.298 | 188 | 20 | 1 | 1 | 186 | 1 | 188 | 4.60e-119 | 335 |
MS.gene72502.t1 | MTR_4g036050 | 87.234 | 188 | 8 | 2 | 1 | 186 | 1 | 174 | 3.93e-115 | 324 |
MS.gene72502.t1 | MTR_7g075870 | 46.154 | 169 | 86 | 2 | 1 | 164 | 1 | 169 | 1.16e-41 | 139 |
MS.gene72502.t1 | MTR_7g075870 | 46.154 | 169 | 85 | 3 | 1 | 164 | 1 | 168 | 5.36e-40 | 135 |
MS.gene72502.t1 | MTR_3g452380 | 42.262 | 168 | 95 | 2 | 1 | 167 | 16 | 182 | 2.24e-38 | 132 |
MS.gene72502.t1 | MTR_8g033220 | 43.452 | 168 | 84 | 4 | 1 | 160 | 1 | 165 | 4.54e-36 | 125 |
MS.gene72502.t1 | MTR_8g033220 | 46.575 | 146 | 71 | 3 | 1 | 142 | 1 | 143 | 6.03e-36 | 125 |
MS.gene72502.t1 | MTR_8g066260 | 44.056 | 143 | 79 | 1 | 1 | 142 | 1 | 143 | 7.35e-36 | 125 |
MS.gene72502.t1 | MTR_8g097090 | 42.614 | 176 | 83 | 3 | 1 | 159 | 1 | 175 | 3.87e-35 | 124 |
MS.gene72502.t1 | MTR_7g075850 | 47.552 | 143 | 74 | 1 | 1 | 142 | 1 | 143 | 1.04e-34 | 122 |
MS.gene72502.t1 | MTR_3g084980 | 45.517 | 145 | 75 | 2 | 1 | 142 | 1 | 144 | 2.83e-34 | 121 |
MS.gene72502.t1 | MTR_3g005530 | 41.566 | 166 | 93 | 3 | 1 | 163 | 1 | 165 | 4.77e-34 | 120 |
MS.gene72502.t1 | MTR_7g016600 | 46.154 | 143 | 75 | 2 | 1 | 142 | 1 | 142 | 5.58e-34 | 120 |
MS.gene72502.t1 | MTR_5g046790 | 42.466 | 146 | 77 | 2 | 1 | 142 | 1 | 143 | 7.14e-34 | 119 |
MS.gene72502.t1 | MTR_2g009890 | 44.156 | 154 | 85 | 1 | 1 | 154 | 1 | 153 | 7.33e-34 | 121 |
MS.gene72502.t1 | MTR_2g017865 | 42.581 | 155 | 87 | 2 | 1 | 154 | 16 | 169 | 2.42e-33 | 119 |
MS.gene72502.t1 | MTR_4g109810 | 45.070 | 142 | 77 | 1 | 1 | 142 | 1 | 141 | 2.86e-33 | 119 |
MS.gene72502.t1 | MTR_5g031000 | 44.521 | 146 | 79 | 2 | 1 | 146 | 1 | 144 | 1.87e-32 | 116 |
MS.gene72502.t1 | MTR_5g031000 | 44.521 | 146 | 79 | 2 | 1 | 146 | 1 | 144 | 2.00e-32 | 116 |
MS.gene72502.t1 | MTR_4g109830 | 42.657 | 143 | 81 | 1 | 1 | 142 | 1 | 143 | 2.45e-32 | 116 |
MS.gene72502.t1 | MTR_4g102530 | 44.444 | 162 | 76 | 5 | 1 | 155 | 1 | 155 | 2.76e-32 | 115 |
MS.gene72502.t1 | MTR_8g033270 | 46.154 | 143 | 75 | 2 | 1 | 142 | 1 | 142 | 3.41e-32 | 116 |
MS.gene72502.t1 | MTR_6g015975 | 45.455 | 143 | 76 | 2 | 1 | 142 | 1 | 142 | 3.71e-32 | 116 |
MS.gene72502.t1 | MTR_8g087860 | 40.000 | 160 | 94 | 2 | 1 | 159 | 17 | 175 | 1.66e-31 | 114 |
MS.gene72502.t1 | MTR_7g016630 | 38.312 | 154 | 94 | 1 | 1 | 154 | 1 | 153 | 1.12e-29 | 110 |
MS.gene72502.t1 | MTR_6g464720 | 36.702 | 188 | 102 | 4 | 1 | 182 | 1 | 177 | 1.84e-29 | 109 |
MS.gene72502.t1 | MTR_1g038300 | 34.975 | 203 | 109 | 4 | 1 | 180 | 1 | 203 | 5.53e-29 | 107 |
MS.gene72502.t1 | MTR_1g053070 | 41.722 | 151 | 82 | 3 | 1 | 146 | 1 | 150 | 1.14e-28 | 107 |
MS.gene72502.t1 | MTR_5g066180 | 43.537 | 147 | 73 | 4 | 1 | 143 | 1 | 141 | 3.32e-28 | 105 |
MS.gene72502.t1 | MTR_3g088615 | 38.732 | 142 | 84 | 2 | 1 | 142 | 1 | 139 | 4.82e-28 | 103 |
MS.gene72502.t1 | MTR_5g046870 | 50.980 | 102 | 42 | 2 | 1 | 94 | 1 | 102 | 1.08e-27 | 100 |
MS.gene72502.t1 | MTR_0003s0590 | 41.611 | 149 | 83 | 2 | 1 | 146 | 1 | 148 | 5.12e-27 | 103 |
MS.gene72502.t1 | MTR_1g101970 | 41.135 | 141 | 80 | 2 | 1 | 139 | 1 | 140 | 2.46e-26 | 99.8 |
MS.gene72502.t1 | MTR_5g032520 | 42.254 | 142 | 74 | 4 | 1 | 138 | 1 | 138 | 1.28e-25 | 99.0 |
MS.gene72502.t1 | MTR_5g032150 | 41.549 | 142 | 75 | 4 | 1 | 138 | 1 | 138 | 7.68e-25 | 96.7 |
MS.gene72502.t1 | MTR_1g029670 | 37.143 | 140 | 83 | 2 | 1 | 139 | 1 | 136 | 1.37e-24 | 94.7 |
MS.gene72502.t1 | MTR_2g461710 | 66.102 | 59 | 20 | 0 | 1 | 59 | 1 | 59 | 8.15e-24 | 89.4 |
MS.gene72502.t1 | MTR_3g113030 | 37.063 | 143 | 85 | 3 | 1 | 142 | 1 | 139 | 1.04e-23 | 94.0 |
MS.gene72502.t1 | MTR_4g093970 | 37.671 | 146 | 87 | 2 | 1 | 143 | 27 | 171 | 1.41e-23 | 93.6 |
MS.gene72502.t1 | MTR_5g066960 | 66.102 | 59 | 20 | 0 | 1 | 59 | 1 | 59 | 1.74e-22 | 85.9 |
MS.gene72502.t1 | MTR_4g093030 | 50.575 | 87 | 28 | 1 | 1 | 72 | 1 | 87 | 2.27e-21 | 85.9 |
MS.gene72502.t1 | MTR_5g021270 | 36.364 | 154 | 87 | 5 | 1 | 148 | 1 | 149 | 2.70e-20 | 84.7 |
MS.gene72502.t1 | MTR_5g021270 | 36.364 | 154 | 87 | 5 | 1 | 148 | 1 | 149 | 3.05e-20 | 84.7 |
MS.gene72502.t1 | MTR_1g041615 | 40.206 | 97 | 53 | 1 | 16 | 107 | 20 | 116 | 1.60e-17 | 75.5 |
MS.gene72502.t1 | MTR_3g102570 | 46.575 | 73 | 39 | 0 | 1 | 73 | 1 | 73 | 2.05e-17 | 78.6 |
MS.gene72502.t1 | MTR_4g084740 | 40.964 | 83 | 49 | 0 | 1 | 83 | 1 | 83 | 4.00e-17 | 77.8 |
MS.gene72502.t1 | MTR_8g079502 | 36.538 | 104 | 55 | 2 | 1 | 104 | 1 | 93 | 4.45e-15 | 70.1 |
MS.gene72502.t1 | MTR_1g063160 | 39.583 | 96 | 55 | 2 | 1 | 96 | 1 | 93 | 4.66e-15 | 70.1 |
MS.gene72502.t1 | MTR_8g051580 | 56.364 | 55 | 24 | 0 | 1 | 55 | 1 | 55 | 6.15e-15 | 69.7 |
MS.gene72502.t1 | MTR_2g093190 | 26.066 | 211 | 120 | 7 | 2 | 186 | 9 | 209 | 2.01e-14 | 69.3 |
MS.gene72502.t1 | MTR_1g047550 | 44.444 | 72 | 39 | 1 | 1 | 72 | 1 | 71 | 1.01e-13 | 66.2 |
MS.gene72502.t1 | MTR_4g131030 | 44.444 | 72 | 39 | 1 | 1 | 72 | 1 | 71 | 2.47e-13 | 65.9 |
MS.gene72502.t1 | MTR_1g054265 | 43.836 | 73 | 40 | 1 | 1 | 73 | 1 | 72 | 2.59e-13 | 65.1 |
MS.gene72502.t1 | MTR_3g030770 | 31.285 | 179 | 96 | 9 | 2 | 154 | 9 | 186 | 5.43e-13 | 65.1 |
MS.gene72502.t1 | MTR_1g108510 | 31.285 | 179 | 96 | 9 | 2 | 154 | 9 | 186 | 5.66e-13 | 65.1 |
MS.gene72502.t1 | MTR_4g094632 | 31.148 | 122 | 80 | 2 | 1 | 122 | 1 | 118 | 5.81e-13 | 63.9 |
MS.gene72502.t1 | MTR_4g094638 | 40.845 | 71 | 41 | 1 | 1 | 71 | 1 | 70 | 1.04e-12 | 63.5 |
MS.gene72502.t1 | MTR_5g045560 | 38.095 | 84 | 50 | 2 | 1 | 84 | 8 | 89 | 1.79e-12 | 63.9 |
MS.gene72502.t1 | MTR_8g043650 | 27.632 | 152 | 85 | 4 | 2 | 132 | 9 | 156 | 1.82e-12 | 63.9 |
MS.gene72502.t1 | MTR_4g108720 | 41.333 | 75 | 43 | 1 | 1 | 74 | 1 | 75 | 2.49e-12 | 64.7 |
MS.gene72502.t1 | MTR_3g052870 | 30.882 | 136 | 78 | 4 | 2 | 125 | 9 | 140 | 2.91e-12 | 63.2 |
MS.gene72502.t1 | MTR_2g105290 | 35.632 | 87 | 55 | 1 | 1 | 87 | 11 | 96 | 3.34e-12 | 62.4 |
MS.gene72502.t1 | MTR_8g086290 | 38.356 | 73 | 44 | 1 | 2 | 74 | 12 | 83 | 3.36e-12 | 62.4 |
MS.gene72502.t1 | MTR_3g052920 | 40.000 | 70 | 41 | 1 | 2 | 71 | 9 | 77 | 3.53e-12 | 63.2 |
MS.gene72502.t1 | MTR_1g106070 | 40.000 | 70 | 41 | 1 | 2 | 71 | 9 | 77 | 3.87e-12 | 62.0 |
MS.gene72502.t1 | MTR_2g030740 | 41.429 | 70 | 40 | 1 | 2 | 71 | 9 | 77 | 5.20e-12 | 62.8 |
MS.gene72502.t1 | MTR_1g105910 | 40.000 | 70 | 41 | 1 | 2 | 71 | 9 | 77 | 6.16e-12 | 62.4 |
MS.gene72502.t1 | MTR_3g080940 | 34.375 | 96 | 59 | 2 | 1 | 96 | 8 | 99 | 6.47e-12 | 62.0 |
MS.gene72502.t1 | MTR_1g012570 | 30.000 | 150 | 84 | 6 | 2 | 132 | 9 | 156 | 8.33e-12 | 62.0 |
MS.gene72502.t1 | MTR_1g108580 | 27.778 | 180 | 101 | 7 | 2 | 154 | 9 | 186 | 1.02e-11 | 61.6 |
MS.gene72502.t1 | MTR_2g085280 | 41.429 | 70 | 40 | 1 | 2 | 71 | 9 | 77 | 1.09e-11 | 62.0 |
MS.gene72502.t1 | MTR_2g085250 | 41.429 | 70 | 40 | 1 | 2 | 71 | 9 | 77 | 1.14e-11 | 61.6 |
MS.gene72502.t1 | MTR_8g046350 | 40.278 | 72 | 42 | 1 | 1 | 72 | 1 | 71 | 1.47e-11 | 60.1 |
MS.gene72502.t1 | MTR_1g077360 | 40.000 | 70 | 41 | 1 | 2 | 71 | 9 | 77 | 1.66e-11 | 61.2 |
MS.gene72502.t1 | MTR_1g105920 | 40.000 | 70 | 41 | 1 | 2 | 71 | 9 | 77 | 2.03e-11 | 61.2 |
MS.gene72502.t1 | MTR_5g041650 | 50.943 | 53 | 26 | 0 | 1 | 53 | 38 | 90 | 2.92e-11 | 61.6 |
MS.gene72502.t1 | MTR_7g028448 | 62.500 | 40 | 15 | 0 | 16 | 55 | 26 | 65 | 4.58e-11 | 58.9 |
MS.gene72502.t1 | MTR_4g036915 | 62.500 | 40 | 15 | 0 | 16 | 55 | 26 | 65 | 4.58e-11 | 58.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72502.t1 | AT1G71692 | 55.924 | 211 | 68 | 5 | 1 | 186 | 1 | 211 | 1.29e-66 | 203 |
MS.gene72502.t1 | AT4G09960 | 43.750 | 160 | 88 | 2 | 1 | 159 | 1 | 159 | 1.04e-38 | 132 |
MS.gene72502.t1 | AT2G42830 | 45.625 | 160 | 85 | 2 | 1 | 159 | 16 | 174 | 2.41e-38 | 132 |
MS.gene72502.t1 | AT3G58780 | 44.375 | 160 | 87 | 2 | 1 | 159 | 16 | 174 | 4.40e-38 | 131 |
MS.gene72502.t1 | AT2G42830 | 45.000 | 160 | 86 | 2 | 1 | 159 | 16 | 174 | 5.19e-38 | 131 |
MS.gene72502.t1 | AT3G58780 | 44.375 | 160 | 87 | 2 | 1 | 159 | 22 | 180 | 5.40e-38 | 131 |
MS.gene72502.t1 | AT3G58780 | 46.853 | 143 | 74 | 2 | 1 | 142 | 16 | 157 | 8.84e-37 | 129 |
MS.gene72502.t1 | AT2G45660 | 46.667 | 150 | 74 | 3 | 1 | 147 | 1 | 147 | 1.03e-36 | 125 |
MS.gene72502.t1 | AT4G09960 | 44.056 | 143 | 78 | 2 | 1 | 142 | 1 | 142 | 7.34e-36 | 125 |
MS.gene72502.t1 | AT4G09960 | 43.537 | 147 | 81 | 2 | 1 | 146 | 2 | 147 | 8.56e-36 | 125 |
MS.gene72502.t1 | AT4G09960 | 43.537 | 147 | 81 | 2 | 1 | 146 | 11 | 156 | 9.35e-36 | 125 |
MS.gene72502.t1 | AT2G45660 | 46.667 | 150 | 74 | 3 | 1 | 147 | 1 | 147 | 1.32e-35 | 124 |
MS.gene72502.t1 | AT1G69120 | 44.521 | 146 | 74 | 2 | 1 | 142 | 1 | 143 | 1.65e-35 | 124 |
MS.gene72502.t1 | AT4G09960 | 43.537 | 147 | 81 | 2 | 1 | 146 | 27 | 172 | 2.08e-35 | 125 |
MS.gene72502.t1 | AT1G24260 | 45.205 | 146 | 75 | 2 | 1 | 142 | 1 | 145 | 3.89e-35 | 124 |
MS.gene72502.t1 | AT1G69120 | 44.521 | 146 | 74 | 2 | 1 | 142 | 1 | 143 | 4.13e-35 | 124 |
MS.gene72502.t1 | AT1G24260 | 44.898 | 147 | 75 | 2 | 1 | 142 | 1 | 146 | 4.94e-35 | 123 |
MS.gene72502.t1 | AT1G24260 | 44.898 | 147 | 75 | 2 | 1 | 142 | 1 | 146 | 6.13e-35 | 123 |
MS.gene72502.t1 | AT3G58780 | 42.500 | 160 | 83 | 2 | 1 | 159 | 16 | 167 | 2.67e-34 | 121 |
MS.gene72502.t1 | AT4G09960 | 43.537 | 147 | 81 | 2 | 1 | 146 | 96 | 241 | 2.68e-34 | 124 |
MS.gene72502.t1 | AT1G26310 | 37.791 | 172 | 98 | 3 | 1 | 164 | 1 | 171 | 3.33e-34 | 121 |
MS.gene72502.t1 | AT4G18960 | 43.662 | 142 | 78 | 2 | 2 | 142 | 18 | 158 | 5.35e-34 | 121 |
MS.gene72502.t1 | AT3G58780 | 38.587 | 184 | 88 | 2 | 1 | 159 | 16 | 199 | 7.48e-34 | 121 |
MS.gene72502.t1 | AT5G60910 | 39.759 | 166 | 86 | 3 | 1 | 155 | 1 | 163 | 4.35e-33 | 118 |
MS.gene72502.t1 | AT2G03710 | 43.537 | 147 | 82 | 1 | 1 | 146 | 1 | 147 | 4.68e-33 | 117 |
MS.gene72502.t1 | AT4G11880 | 40.764 | 157 | 93 | 0 | 1 | 157 | 1 | 157 | 5.62e-33 | 116 |
MS.gene72502.t1 | AT4G11880 | 40.764 | 157 | 93 | 0 | 1 | 157 | 1 | 157 | 5.62e-33 | 116 |
MS.gene72502.t1 | AT4G37940 | 42.177 | 147 | 82 | 3 | 1 | 146 | 1 | 145 | 1.21e-32 | 117 |
MS.gene72502.t1 | AT5G62165 | 41.935 | 155 | 88 | 2 | 1 | 154 | 1 | 154 | 2.08e-32 | 115 |
MS.gene72502.t1 | AT5G62165 | 41.935 | 155 | 88 | 2 | 1 | 154 | 1 | 154 | 2.08e-32 | 115 |
MS.gene72502.t1 | AT4G11880 | 42.958 | 142 | 81 | 0 | 1 | 142 | 1 | 142 | 2.23e-32 | 116 |
MS.gene72502.t1 | AT4G11880 | 42.958 | 142 | 81 | 0 | 1 | 142 | 1 | 142 | 2.23e-32 | 116 |
MS.gene72502.t1 | AT4G37940 | 40.397 | 151 | 87 | 3 | 1 | 150 | 1 | 149 | 2.29e-32 | 115 |
MS.gene72502.t1 | AT4G22950 | 39.884 | 173 | 99 | 2 | 1 | 169 | 1 | 172 | 2.50e-32 | 114 |
MS.gene72502.t1 | AT2G03710 | 43.537 | 147 | 82 | 1 | 1 | 146 | 1 | 147 | 2.51e-32 | 117 |
MS.gene72502.t1 | AT2G03710 | 43.537 | 147 | 82 | 1 | 1 | 146 | 1 | 147 | 2.65e-32 | 117 |
MS.gene72502.t1 | AT2G45650 | 45.205 | 146 | 71 | 3 | 1 | 142 | 1 | 141 | 4.58e-32 | 116 |
MS.gene72502.t1 | AT4G37940 | 41.958 | 143 | 80 | 3 | 1 | 142 | 1 | 141 | 4.92e-32 | 114 |
MS.gene72502.t1 | AT3G57230 | 41.007 | 139 | 81 | 1 | 1 | 139 | 1 | 138 | 1.01e-31 | 112 |
MS.gene72502.t1 | AT5G15800 | 45.455 | 143 | 77 | 1 | 1 | 142 | 1 | 143 | 1.14e-31 | 115 |
MS.gene72502.t1 | AT3G02310 | 44.755 | 143 | 78 | 1 | 1 | 142 | 1 | 143 | 1.60e-31 | 113 |
MS.gene72502.t1 | AT5G15800 | 45.455 | 143 | 77 | 1 | 1 | 142 | 1 | 143 | 1.78e-31 | 115 |
MS.gene72502.t1 | AT3G57230 | 40.411 | 146 | 86 | 1 | 1 | 146 | 1 | 145 | 1.89e-31 | 114 |
MS.gene72502.t1 | AT3G57230 | 40.411 | 146 | 86 | 1 | 1 | 146 | 1 | 145 | 1.89e-31 | 114 |
MS.gene72502.t1 | AT5G62165 | 41.958 | 143 | 81 | 2 | 1 | 142 | 1 | 142 | 8.00e-31 | 110 |
MS.gene72502.t1 | AT5G62165 | 41.958 | 143 | 81 | 2 | 1 | 142 | 1 | 142 | 8.00e-31 | 110 |
MS.gene72502.t1 | AT5G62165 | 41.958 | 143 | 81 | 2 | 1 | 142 | 1 | 142 | 8.00e-31 | 110 |
MS.gene72502.t1 | AT5G62165 | 41.958 | 143 | 81 | 2 | 1 | 142 | 1 | 142 | 1.02e-30 | 109 |
MS.gene72502.t1 | AT5G62165 | 41.958 | 143 | 81 | 2 | 1 | 142 | 1 | 142 | 1.02e-30 | 109 |
MS.gene72502.t1 | AT5G62165 | 41.958 | 143 | 81 | 2 | 1 | 142 | 1 | 142 | 1.02e-30 | 109 |
MS.gene72502.t1 | AT5G62165 | 41.958 | 143 | 81 | 2 | 1 | 142 | 1 | 142 | 1.02e-30 | 109 |
MS.gene72502.t1 | AT5G62165 | 41.958 | 143 | 81 | 2 | 1 | 142 | 1 | 142 | 1.02e-30 | 109 |
MS.gene72502.t1 | AT4G22950 | 42.958 | 142 | 80 | 1 | 1 | 142 | 1 | 141 | 1.42e-30 | 111 |
MS.gene72502.t1 | AT4G22950 | 42.958 | 142 | 80 | 1 | 1 | 142 | 1 | 141 | 1.42e-30 | 111 |
MS.gene72502.t1 | AT3G02310 | 44.755 | 143 | 78 | 1 | 1 | 142 | 1 | 143 | 1.46e-30 | 112 |
MS.gene72502.t1 | AT3G30260 | 40.972 | 144 | 82 | 2 | 1 | 142 | 1 | 143 | 1.59e-30 | 112 |
MS.gene72502.t1 | AT5G62165 | 41.958 | 143 | 81 | 2 | 1 | 142 | 1 | 142 | 4.79e-30 | 109 |
MS.gene72502.t1 | AT5G62165 | 41.958 | 143 | 81 | 2 | 1 | 142 | 1 | 142 | 4.79e-30 | 109 |
MS.gene72502.t1 | AT5G62165 | 41.958 | 143 | 81 | 2 | 1 | 142 | 1 | 142 | 4.79e-30 | 109 |
MS.gene72502.t1 | AT5G23260 | 37.931 | 174 | 105 | 2 | 1 | 173 | 1 | 172 | 5.02e-30 | 110 |
MS.gene72502.t1 | AT5G51870 | 38.750 | 160 | 89 | 4 | 1 | 156 | 1 | 155 | 6.83e-30 | 108 |
MS.gene72502.t1 | AT5G51870 | 38.750 | 160 | 89 | 4 | 1 | 156 | 24 | 178 | 1.70e-29 | 108 |
MS.gene72502.t1 | AT5G13790 | 35.784 | 204 | 101 | 4 | 1 | 181 | 1 | 197 | 2.50e-29 | 109 |
MS.gene72502.t1 | AT5G13790 | 36.585 | 205 | 101 | 6 | 1 | 181 | 1 | 200 | 5.07e-29 | 108 |
MS.gene72502.t1 | AT3G61120 | 44.295 | 149 | 67 | 3 | 1 | 142 | 1 | 140 | 3.47e-28 | 105 |
MS.gene72502.t1 | AT2G14210 | 37.912 | 182 | 107 | 3 | 1 | 177 | 1 | 181 | 4.27e-28 | 105 |
MS.gene72502.t1 | AT2G14210 | 37.912 | 182 | 107 | 3 | 1 | 177 | 1 | 181 | 4.36e-28 | 105 |
MS.gene72502.t1 | AT5G51870 | 39.726 | 146 | 81 | 3 | 1 | 142 | 1 | 143 | 1.30e-27 | 103 |
MS.gene72502.t1 | AT5G23260 | 36.612 | 183 | 104 | 3 | 1 | 173 | 17 | 197 | 1.77e-27 | 104 |
MS.gene72502.t1 | AT5G23260 | 41.958 | 143 | 80 | 2 | 1 | 142 | 1 | 141 | 2.12e-27 | 103 |
MS.gene72502.t1 | AT5G51870 | 39.726 | 146 | 81 | 3 | 1 | 142 | 1 | 143 | 2.64e-27 | 103 |
MS.gene72502.t1 | AT5G23260 | 41.958 | 143 | 80 | 2 | 1 | 142 | 17 | 157 | 3.22e-27 | 103 |
MS.gene72502.t1 | AT5G51870 | 39.726 | 146 | 81 | 3 | 1 | 142 | 11 | 153 | 3.76e-27 | 102 |
MS.gene72502.t1 | AT2G22630 | 38.095 | 147 | 88 | 3 | 1 | 146 | 1 | 145 | 2.55e-26 | 100 |
MS.gene72502.t1 | AT2G22630 | 38.095 | 147 | 88 | 3 | 1 | 146 | 1 | 145 | 2.55e-26 | 100 |
MS.gene72502.t1 | AT5G62165 | 58.667 | 75 | 30 | 1 | 1 | 75 | 1 | 74 | 1.00e-25 | 95.9 |
MS.gene72502.t1 | AT5G51860 | 36.806 | 144 | 82 | 3 | 1 | 139 | 1 | 140 | 9.03e-25 | 95.9 |
MS.gene72502.t1 | AT5G51860 | 34.615 | 182 | 99 | 5 | 1 | 166 | 1 | 178 | 9.44e-25 | 96.3 |
MS.gene72502.t1 | AT5G20240 | 35.461 | 141 | 86 | 2 | 1 | 140 | 1 | 137 | 5.49e-24 | 92.4 |
MS.gene72502.t1 | AT3G57390 | 36.667 | 150 | 86 | 2 | 1 | 142 | 1 | 149 | 2.08e-23 | 93.2 |
MS.gene72502.t1 | AT5G20240 | 35.461 | 141 | 86 | 2 | 1 | 140 | 1 | 137 | 2.49e-23 | 92.4 |
MS.gene72502.t1 | AT2G22540 | 40.141 | 142 | 77 | 4 | 1 | 138 | 1 | 138 | 2.70e-23 | 93.2 |
MS.gene72502.t1 | AT2G22540 | 40.141 | 142 | 77 | 4 | 1 | 138 | 1 | 138 | 2.70e-23 | 93.2 |
MS.gene72502.t1 | AT3G57390 | 36.667 | 150 | 86 | 2 | 1 | 142 | 1 | 149 | 3.29e-23 | 93.2 |
MS.gene72502.t1 | AT4G24540 | 41.333 | 150 | 75 | 6 | 1 | 144 | 1 | 143 | 9.06e-23 | 91.3 |
MS.gene72502.t1 | AT1G31140 | 37.931 | 145 | 87 | 2 | 1 | 142 | 1 | 145 | 1.36e-22 | 90.5 |
MS.gene72502.t1 | AT1G31140 | 37.762 | 143 | 88 | 1 | 1 | 142 | 1 | 143 | 2.07e-22 | 90.1 |
MS.gene72502.t1 | AT2G22540 | 41.304 | 138 | 76 | 3 | 1 | 138 | 1 | 133 | 4.20e-22 | 89.7 |
MS.gene72502.t1 | AT5G65070 | 34.483 | 145 | 82 | 4 | 1 | 142 | 1 | 135 | 1.80e-21 | 85.9 |
MS.gene72502.t1 | AT5G65070 | 48.571 | 70 | 36 | 0 | 1 | 70 | 1 | 70 | 1.19e-20 | 85.1 |
MS.gene72502.t1 | AT5G10140 | 34.507 | 142 | 86 | 2 | 1 | 142 | 1 | 135 | 1.42e-20 | 84.3 |
MS.gene72502.t1 | AT5G10140 | 34.507 | 142 | 86 | 2 | 1 | 142 | 1 | 135 | 2.21e-20 | 84.3 |
MS.gene72502.t1 | AT5G10140 | 33.803 | 142 | 87 | 1 | 1 | 142 | 1 | 135 | 2.32e-20 | 84.3 |
MS.gene72502.t1 | AT5G10140 | 33.803 | 142 | 87 | 1 | 1 | 142 | 1 | 135 | 2.43e-20 | 84.0 |
MS.gene72502.t1 | AT5G65070 | 48.571 | 70 | 36 | 0 | 1 | 70 | 1 | 70 | 2.48e-20 | 84.7 |
MS.gene72502.t1 | AT5G65070 | 48.571 | 70 | 36 | 0 | 1 | 70 | 1 | 70 | 3.31e-20 | 84.7 |
MS.gene72502.t1 | AT5G65050 | 33.333 | 174 | 99 | 4 | 1 | 167 | 1 | 164 | 6.14e-20 | 82.8 |
MS.gene72502.t1 | AT3G54340 | 37.500 | 152 | 80 | 5 | 1 | 146 | 1 | 143 | 1.25e-19 | 83.2 |
MS.gene72502.t1 | AT5G65050 | 33.146 | 178 | 102 | 4 | 1 | 171 | 1 | 168 | 1.96e-19 | 82.0 |
MS.gene72502.t1 | AT5G65080 | 43.902 | 82 | 45 | 1 | 1 | 82 | 8 | 88 | 2.99e-19 | 81.3 |
MS.gene72502.t1 | AT5G65060 | 50.000 | 70 | 35 | 0 | 1 | 70 | 1 | 70 | 3.50e-19 | 81.3 |
MS.gene72502.t1 | AT5G65050 | 38.983 | 118 | 57 | 3 | 1 | 104 | 1 | 117 | 4.23e-19 | 80.9 |
MS.gene72502.t1 | AT5G65060 | 50.000 | 70 | 35 | 0 | 1 | 70 | 1 | 70 | 4.84e-19 | 80.9 |
MS.gene72502.t1 | AT5G65060 | 50.000 | 70 | 35 | 0 | 1 | 70 | 1 | 70 | 4.85e-19 | 80.5 |
MS.gene72502.t1 | AT5G65050 | 48.571 | 70 | 36 | 0 | 1 | 70 | 1 | 70 | 5.45e-19 | 80.5 |
MS.gene72502.t1 | AT5G65070 | 54.237 | 59 | 27 | 0 | 1 | 59 | 1 | 59 | 3.12e-18 | 79.3 |
MS.gene72502.t1 | AT5G65080 | 52.542 | 59 | 28 | 0 | 1 | 59 | 8 | 66 | 3.12e-16 | 73.6 |
MS.gene72502.t1 | AT1G77980 | 44.595 | 74 | 41 | 0 | 1 | 74 | 1 | 74 | 4.05e-16 | 75.1 |
MS.gene72502.t1 | AT1G22130 | 40.244 | 82 | 49 | 0 | 1 | 82 | 1 | 82 | 1.22e-15 | 73.9 |
MS.gene72502.t1 | AT1G77080 | 32.065 | 184 | 102 | 6 | 1 | 174 | 1 | 171 | 5.73e-15 | 69.7 |
MS.gene72502.t1 | AT1G72350 | 47.887 | 71 | 34 | 1 | 2 | 72 | 43 | 110 | 1.16e-14 | 69.7 |
MS.gene72502.t1 | AT1G77080 | 34.483 | 145 | 82 | 4 | 1 | 142 | 1 | 135 | 1.50e-14 | 68.6 |
MS.gene72502.t1 | AT1G77080 | 34.483 | 145 | 82 | 4 | 1 | 142 | 1 | 135 | 2.06e-14 | 68.6 |
MS.gene72502.t1 | AT4G37435 | 37.168 | 113 | 66 | 3 | 1 | 111 | 1 | 110 | 5.42e-14 | 67.4 |
MS.gene72502.t1 | AT1G77080 | 37.069 | 116 | 62 | 4 | 1 | 112 | 1 | 109 | 1.25e-13 | 67.0 |
MS.gene72502.t1 | AT1G77950 | 37.805 | 82 | 51 | 0 | 1 | 82 | 1 | 82 | 1.45e-13 | 67.4 |
MS.gene72502.t1 | AT1G77950 | 37.805 | 82 | 51 | 0 | 1 | 82 | 1 | 82 | 1.45e-13 | 67.4 |
MS.gene72502.t1 | AT1G77950 | 37.805 | 82 | 51 | 0 | 1 | 82 | 1 | 82 | 1.45e-13 | 67.4 |
MS.gene72502.t1 | AT1G77950 | 37.805 | 82 | 51 | 0 | 1 | 82 | 1 | 82 | 1.45e-13 | 67.4 |
MS.gene72502.t1 | AT2G34440 | 41.667 | 72 | 41 | 1 | 1 | 72 | 1 | 71 | 2.17e-13 | 65.5 |
MS.gene72502.t1 | AT2G24840 | 42.254 | 71 | 40 | 1 | 1 | 71 | 62 | 131 | 2.91e-13 | 66.6 |
MS.gene72502.t1 | AT2G03060 | 44.000 | 75 | 41 | 1 | 1 | 74 | 1 | 75 | 1.06e-12 | 65.9 |
MS.gene72502.t1 | AT2G03060 | 44.000 | 75 | 41 | 1 | 1 | 74 | 1 | 75 | 1.06e-12 | 65.9 |
MS.gene72502.t1 | AT2G03060 | 44.000 | 75 | 41 | 1 | 1 | 74 | 1 | 75 | 1.06e-12 | 65.9 |
MS.gene72502.t1 | AT2G03060 | 44.000 | 75 | 41 | 1 | 1 | 74 | 1 | 75 | 1.11e-12 | 65.9 |
MS.gene72502.t1 | AT1G01530 | 48.276 | 58 | 30 | 0 | 1 | 58 | 6 | 63 | 1.19e-12 | 64.7 |
MS.gene72502.t1 | AT1G18750 | 32.624 | 141 | 78 | 3 | 1 | 141 | 1 | 124 | 1.26e-12 | 65.5 |
MS.gene72502.t1 | AT3G66656 | 46.552 | 58 | 31 | 0 | 1 | 58 | 1 | 58 | 1.37e-12 | 63.5 |
MS.gene72502.t1 | AT1G77080 | 46.970 | 66 | 35 | 0 | 1 | 66 | 1 | 66 | 1.76e-12 | 62.4 |
MS.gene72502.t1 | AT1G77080 | 46.970 | 66 | 35 | 0 | 1 | 66 | 1 | 66 | 3.27e-12 | 62.8 |
MS.gene72502.t1 | AT1G18750 | 41.333 | 75 | 43 | 1 | 1 | 74 | 1 | 75 | 5.17e-12 | 63.9 |
MS.gene72502.t1 | AT1G18750 | 41.333 | 75 | 43 | 1 | 1 | 74 | 1 | 75 | 5.26e-12 | 63.9 |
MS.gene72502.t1 | AT1G69540 | 39.189 | 74 | 45 | 0 | 1 | 74 | 1 | 74 | 1.23e-11 | 62.4 |
MS.gene72502.t1 | AT1G69540 | 39.189 | 74 | 45 | 0 | 1 | 74 | 1 | 74 | 1.49e-11 | 62.4 |
MS.gene72502.t1 | AT4G36590 | 43.478 | 69 | 38 | 1 | 2 | 70 | 7 | 74 | 1.85e-11 | 61.2 |
Find 41 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATTTGTTTGGAGGAGGATT+AGG | 0.243362 | 4.1:+64185467 | MS.gene72502:CDS |
AGAGATCGATACCTTGAAAA+AGG | 0.266558 | 4.1:+64184482 | MS.gene72502:CDS |
GTGCTTTGCGATGCTGAAAT+TGG | 0.317759 | 4.1:+64181116 | MS.gene72502:CDS |
TTGAAAAGAACCTCGAAATC+TGG | 0.328582 | 4.1:+64185519 | MS.gene72502:CDS |
ATTTGTTTGGAGGAGGATTA+GGG | 0.367328 | 4.1:+64185468 | MS.gene72502:CDS |
AAATAAGTATCTCCACGATT+TGG | 0.388441 | 4.1:+64201586 | MS.gene72502:CDS |
ATTATTAGCAGGTATTTGTT+TGG | 0.404793 | 4.1:+64185455 | MS.gene72502:intron |
TGGAGGAGGATTAGGGACTA+TGG | 0.415641 | 4.1:+64185475 | MS.gene72502:CDS |
CGTGCTTCAGTGATAGCTTC+AGG | 0.416419 | 4.1:-64181740 | None:intergenic |
ATTTAAGGAGGGAACACTTA+AGG | 0.425708 | 4.1:+64201559 | MS.gene72502:intron |
ATCTCATCTTGTATAATTAG+TGG | 0.434615 | 4.1:-64201774 | None:intergenic |
AAAGTCACTTGCCTGTGCAC+TGG | 0.436750 | 4.1:-64181047 | None:intergenic |
CCGAGCGGGGCTTCTGAAGA+AGG | 0.465308 | 4.1:+64181079 | MS.gene72502:CDS |
AAGTCACTTGCCTGTGCACT+GGG | 0.471642 | 4.1:-64181046 | None:intergenic |
AGCAGGTATTTGTTTGGAGG+AGG | 0.478589 | 4.1:+64185461 | MS.gene72502:intron |
ACTTTCTGTAAGCGCCGAGC+GGG | 0.485647 | 4.1:+64181065 | MS.gene72502:CDS |
CTCTATGAACTCGCCACCAA+AGG | 0.491747 | 4.1:+64181167 | MS.gene72502:CDS |
CTTCTCTATTAGCCCTTGCA+TGG | 0.492434 | 4.1:-64181690 | None:intergenic |
CATTATACATCCAGATTTCG+AGG | 0.493442 | 4.1:-64185529 | None:intergenic |
ATTAGCAGGTATTTGTTTGG+AGG | 0.497755 | 4.1:+64185458 | MS.gene72502:intron |
AACGAAGTATCAGTAGCAAA+TGG | 0.506323 | 4.1:-64201750 | None:intergenic |
CCTTCTTCAGAAGCCCCGCT+CGG | 0.527878 | 4.1:-64181079 | None:intergenic |
TTCATAGAGCTTTCCATGAG+CGG | 0.532053 | 4.1:-64181153 | None:intergenic |
ATGAAATGAAGAACCATGCA+AGG | 0.539615 | 4.1:+64181677 | MS.gene72502:intron |
TCTCATCTTGTATAATTAGT+GGG | 0.543382 | 4.1:-64201773 | None:intergenic |
GTATAATGTTCGCTCAATGA+AGG | 0.550286 | 4.1:+64185544 | MS.gene72502:CDS |
TCTATGAACTCGCCACCAAA+GGG | 0.554348 | 4.1:+64181168 | MS.gene72502:CDS |
AATCGACATGGCTCGAGGGA+AGG | 0.556037 | 4.1:+64181001 | None:intergenic |
GAATTGAGAACCCAGTGCAC+AGG | 0.556607 | 4.1:+64181036 | MS.gene72502:CDS |
TCATATCTAGGATGCTAAAG+AGG | 0.576504 | 4.1:+64184440 | MS.gene72502:intron |
AGGATTAGGGACTATGGCAA+TGG | 0.589394 | 4.1:+64185481 | MS.gene72502:CDS |
AAATAAGACATACCCTTTGG+TGG | 0.590074 | 4.1:-64181180 | None:intergenic |
GGGGCTTCTGAAGAAGGCTA+AGG | 0.602676 | 4.1:+64181085 | MS.gene72502:CDS |
AAGAATATATTACCAAATCG+TGG | 0.607607 | 4.1:-64201598 | None:intergenic |
GATCTCTTGCTTGAGCACAT+TGG | 0.611486 | 4.1:-64184466 | None:intergenic |
TGAAATGAAGAACCATGCAA+GGG | 0.614636 | 4.1:+64181678 | MS.gene72502:intron |
CTTTCTGTAAGCGCCGAGCG+GGG | 0.616522 | 4.1:+64181066 | MS.gene72502:CDS |
GACTTTCTGTAAGCGCCGAG+CGG | 0.650769 | 4.1:+64181064 | MS.gene72502:CDS |
TAAGGAGGGAACACTTAAGG+CGG | 0.674035 | 4.1:+64201562 | MS.gene72502:intron |
AAGTACTTGAAGTTCACACG+AGG | 0.730119 | 4.1:+64181710 | MS.gene72502:CDS |
AGTACTTGAAGTTCACACGA+GGG | 0.748606 | 4.1:+64181711 | MS.gene72502:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 64181008 | 64201809 | 64181008 | ID=MS.gene72502 |
chr4.1 | mRNA | 64181008 | 64201809 | 64181008 | ID=MS.gene72502.t1;Parent=MS.gene72502 |
chr4.1 | exon | 64181008 | 64181189 | 64181008 | ID=MS.gene72502.t1.exon1;Parent=MS.gene72502.t1 |
chr4.1 | CDS | 64181008 | 64181189 | 64181008 | ID=cds.MS.gene72502.t1;Parent=MS.gene72502.t1 |
chr4.1 | exon | 64181688 | 64181769 | 64181688 | ID=MS.gene72502.t1.exon2;Parent=MS.gene72502.t1 |
chr4.1 | CDS | 64181688 | 64181769 | 64181688 | ID=cds.MS.gene72502.t1;Parent=MS.gene72502.t1 |
chr4.1 | exon | 64184450 | 64184511 | 64184450 | ID=MS.gene72502.t1.exon3;Parent=MS.gene72502.t1 |
chr4.1 | CDS | 64184450 | 64184511 | 64184450 | ID=cds.MS.gene72502.t1;Parent=MS.gene72502.t1 |
chr4.1 | exon | 64185466 | 64185565 | 64185466 | ID=MS.gene72502.t1.exon4;Parent=MS.gene72502.t1 |
chr4.1 | CDS | 64185466 | 64185565 | 64185466 | ID=cds.MS.gene72502.t1;Parent=MS.gene72502.t1 |
chr4.1 | exon | 64201566 | 64201607 | 64201566 | ID=MS.gene72502.t1.exon5;Parent=MS.gene72502.t1 |
chr4.1 | CDS | 64201566 | 64201607 | 64201566 | ID=cds.MS.gene72502.t1;Parent=MS.gene72502.t1 |
chr4.1 | exon | 64201717 | 64201809 | 64201717 | ID=MS.gene72502.t1.exon6;Parent=MS.gene72502.t1 |
chr4.1 | CDS | 64201717 | 64201809 | 64201717 | ID=cds.MS.gene72502.t1;Parent=MS.gene72502.t1 |
Gene Sequence |
Protein sequence |