AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene72876

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72876.t1 MTR_5g027550 88.333 240 14 4 1 237 1 229 1.58e-136 383
MS.gene72876.t1 MTR_5g027570 65.432 243 66 8 1 237 1 231 6.05e-100 290
MS.gene72876.t1 MTR_5g088060 54.355 287 67 8 1 237 189 461 9.65e-85 259
MS.gene72876.t1 MTR_5g488160 54.355 287 67 8 1 237 189 461 9.65e-85 259
MS.gene72876.t1 MTR_5g088010 54.264 258 60 6 29 237 1 249 2.20e-82 246
MS.gene72876.t1 MTR_3g462790 41.935 155 77 6 29 175 82 231 2.92e-23 96.3
MS.gene72876.t1 MTR_7g067080 56.579 76 30 1 84 159 136 208 1.69e-22 94.0
MS.gene72876.t1 MTR_5g069710 41.135 141 62 6 31 159 69 200 1.14e-21 91.7
MS.gene72876.t1 MTR_5g081860 36.527 167 89 4 64 222 105 262 1.15e-21 90.9
MS.gene72876.t1 MTR_1g111830 37.589 141 78 4 34 169 67 202 1.18e-21 90.1
MS.gene72876.t1 MTR_8g063600 39.496 119 61 2 84 192 102 219 1.27e-21 91.3
MS.gene72876.t1 MTR_8g063870 40.476 126 59 4 41 166 60 169 4.90e-20 86.7
MS.gene72876.t1 MTR_4g107230 30.952 168 89 5 6 172 22 163 1.84e-19 85.1
MS.gene72876.t1 MTR_6g092540 50.000 78 36 1 84 161 93 167 2.30e-19 85.1
MS.gene72876.t1 MTR_4g111975 46.341 82 40 2 84 164 134 212 8.37e-19 83.6
MS.gene72876.t1 MTR_2g100930 37.931 116 59 3 84 198 105 208 2.75e-18 82.8
MS.gene72876.t1 MTR_4g100630 42.857 84 45 1 76 159 83 163 3.06e-18 82.4
MS.gene72876.t1 MTR_8g101650 52.778 72 30 1 84 155 101 168 3.62e-18 81.6
MS.gene72876.t1 MTR_4g015130 54.839 62 25 1 98 159 3 61 1.34e-17 75.5
MS.gene72876.t1 MTR_3g104370 45.946 74 40 0 82 155 85 158 1.99e-17 78.6
MS.gene72876.t1 MTR_5g037080 41.228 114 55 4 50 163 71 172 2.29e-17 79.7
MS.gene72876.t1 MTR_1g048660 52.941 68 29 1 90 157 14 78 2.41e-17 74.7
MS.gene72876.t1 MTR_5g075760 36.000 125 72 4 37 161 61 177 3.32e-16 75.1
MS.gene72876.t1 MTR_5g075790 32.143 112 71 2 54 161 75 185 9.30e-15 71.2
MS.gene72876.t1 MTR_3g070110 48.611 72 33 1 89 156 96 167 2.45e-14 70.1
MS.gene72876.t1 MTR_0036s0260 43.478 69 36 1 88 156 28 93 2.94e-14 69.7
MS.gene72876.t1 MTR_1g083180 45.833 72 38 1 85 156 58 128 3.82e-14 68.9
MS.gene72876.t1 MTR_1g033620 50.794 63 28 1 104 166 21 80 4.16e-14 69.7
MS.gene72876.t1 MTR_2g090305 44.928 69 35 1 88 156 28 93 2.62e-13 66.6
MS.gene72876.t1 MTR_5g027770 40.566 106 53 3 10 114 95 191 5.40e-11 61.6
MS.gene72876.t1 MTR_8g072990 31.731 104 51 3 83 167 95 197 6.63e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72876.t1 AT2G38090 39.726 146 66 6 31 159 69 209 4.01e-23 95.5
MS.gene72876.t1 AT5G08520 36.306 157 83 4 23 166 41 193 6.85e-23 94.7
MS.gene72876.t1 AT5G58900 57.895 76 29 1 84 159 137 209 1.12e-22 94.0
MS.gene72876.t1 AT5G01200 38.514 148 68 5 31 159 71 214 3.24e-22 92.4
MS.gene72876.t1 AT3G11280 41.221 131 67 5 31 159 73 195 9.42e-22 90.9
MS.gene72876.t1 AT3G11280 41.221 131 67 5 31 159 73 195 9.42e-22 90.9
MS.gene72876.t1 AT5G04760 45.455 110 52 3 76 185 87 188 1.62e-21 89.4
MS.gene72876.t1 AT3G10580 36.641 131 66 3 37 167 56 169 1.81e-21 90.1
MS.gene72876.t1 AT5G23650 41.985 131 61 4 37 157 61 186 2.32e-21 91.3
MS.gene72876.t1 AT3G10580 36.641 131 66 3 37 167 56 169 3.77e-21 89.7
MS.gene72876.t1 AT5G05790 33.908 174 101 5 31 200 71 234 9.88e-21 88.6
MS.gene72876.t1 AT5G05790 33.908 174 101 5 31 200 71 234 9.88e-21 88.6
MS.gene72876.t1 AT5G61620 49.383 81 34 2 77 157 101 174 3.66e-19 84.7
MS.gene72876.t1 AT1G49010 46.914 81 40 1 80 160 126 203 5.08e-19 84.3
MS.gene72876.t1 AT5G47390 36.066 122 66 3 50 171 65 174 6.02e-19 84.7
MS.gene72876.t1 AT1G19000 65.385 52 18 0 83 134 97 148 1.79e-18 82.4
MS.gene72876.t1 AT1G19000 65.385 52 18 0 83 134 97 148 1.79e-18 82.4
MS.gene72876.t1 AT5G56840 42.268 97 48 2 84 180 87 175 4.23e-18 80.5
MS.gene72876.t1 AT1G74840 56.250 64 28 0 71 134 79 142 9.21e-18 79.7
MS.gene72876.t1 AT1G74840 56.250 64 28 0 71 134 79 142 9.41e-18 80.1
MS.gene72876.t1 AT4G09450 35.766 137 69 4 37 173 54 171 1.14e-17 78.6
MS.gene72876.t1 AT3G10590 46.939 98 45 3 62 157 84 176 1.38e-16 75.9
MS.gene72876.t1 AT1G70000 59.259 54 22 0 82 135 92 145 3.29e-16 75.9
MS.gene72876.t1 AT1G70000 59.259 54 22 0 82 135 92 145 3.29e-16 75.9
MS.gene72876.t1 AT3G16350 43.023 86 49 0 50 135 99 184 4.61e-16 76.6

Find 44 sgRNAs with CRISPR-Local

Find 106 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCATTGTCCTTGTTATTTA+AGG 0.115096 5.1:-18097857 None:intergenic
GACTATTGTGTCGTTGTTTA+AGG 0.122911 5.1:-18097758 None:intergenic
TTTCTTCTTCTCTATTTCTT+TGG 0.241888 5.1:-18097710 None:intergenic
TCTCTATTTCTTTGGCAGTT+TGG 0.295652 5.1:-18097702 None:intergenic
TTCTCAAGTTTGTTCATATC+AGG 0.295923 5.1:-18097943 None:intergenic
TTTGCTTCATGACTTCCTTC+TGG 0.307695 5.1:-18096280 None:intergenic
TGTCAAGTTTCTCTTGTTGT+TGG 0.325112 5.1:-18096150 None:intergenic
GCGCAACTTGTTTAACTTGT+TGG 0.342312 5.1:+18097969 MS.gene72876:CDS
TGTTGGTCCATGCTATTCTC+AGG 0.370831 5.1:-18096133 None:intergenic
GATATGTAGGTCGTTTCTAC+AGG 0.371977 5.1:+18097570 MS.gene72876:intron
ATGTTATCATCATTAGAGTT+TGG 0.374150 5.1:-18096208 None:intergenic
AGGCCAACTGATACATTTGT+TGG 0.437602 5.1:-18097894 None:intergenic
CTATTTCTTTGGCAGTTTGG+TGG 0.446999 5.1:-18097699 None:intergenic
TTGGCCTTGCTTTATCCAAT+CGG 0.464369 5.1:+18097910 MS.gene72876:CDS
GACACTGATGTCGTTGAGTC+GGG 0.467326 5.1:+18096169 MS.gene72876:CDS
GGCCAACTGATACATTTGTT+GGG 0.476834 5.1:-18097893 None:intergenic
GCATGACTAGCAATTTGAGT+TGG 0.487768 5.1:-18097658 None:intergenic
GTTGGTCCATGCTATTCTCA+GGG 0.498294 5.1:-18096132 None:intergenic
AAAGAGAGGGCGTAAGGAAA+GGG 0.530997 5.1:+18096300 MS.gene72876:CDS
CAAAGAGAGGGCGTAAGGAA+AGG 0.532803 5.1:+18096299 MS.gene72876:CDS
TCAGGAAGTGCAGTACCGAT+TGG 0.538889 5.1:-18097925 None:intergenic
ATATGTAGGTCGTTTCTACA+GGG 0.546671 5.1:+18097571 MS.gene72876:intron
TGACACTGATGTCGTTGAGT+CGG 0.546703 5.1:+18096168 MS.gene72876:CDS
TGGCTTCTTGTTGTTCAAGA+GGG 0.564198 5.1:-18097786 None:intergenic
TTTAAGGTAGCTGTGTCTTG+AGG 0.565081 5.1:-18097841 None:intergenic
TGAAGCAAAGAGAGGGCGTA+AGG 0.567823 5.1:+18096294 MS.gene72876:CDS
CACAGCTACCTTAAATAACA+AGG 0.577999 5.1:+18097849 MS.gene72876:CDS
AACCCAACAAATGTATCAGT+TGG 0.579773 5.1:+18097891 MS.gene72876:CDS
GGCGTAAGGAAAGGGTACAT+TGG 0.585151 5.1:+18096308 MS.gene72876:CDS
AAGGTAGCTGTGTCTTGAGG+AGG 0.587982 5.1:-18097838 None:intergenic
TAAGGAAAGGGTACATTGGA+CGG 0.593107 5.1:+18096312 MS.gene72876:CDS
GTGGCTTCTTGTTGTTCAAG+AGG 0.593681 5.1:-18097787 None:intergenic
GAAAGGGTACATTGGACGGA+AGG 0.614122 5.1:+18096316 MS.gene72876:CDS
TTGGTCCATGCTATTCTCAG+GGG 0.618470 5.1:-18096131 None:intergenic
TGGTCCATGCTATTCTCAGG+GGG 0.624422 5.1:-18096130 None:intergenic
ATTAGAGTTTGGAATTGCGA+CGG 0.624770 5.1:-18096197 None:intergenic
ATCATATTGATCTAAATGAG+AGG 0.625540 5.1:+18096092 MS.gene72876:CDS
GAAGTCATGAAGCAAAGAGA+GGG 0.628581 5.1:+18096287 MS.gene72876:CDS
GGAAGTCATGAAGCAAAGAG+AGG 0.629765 5.1:+18096286 MS.gene72876:CDS
CAAGCTGAGTCAGTACCAGA+AGG 0.630435 5.1:+18096265 MS.gene72876:CDS
ATGTAGGTCGTTTCTACAGG+GGG 0.657825 5.1:+18097573 MS.gene72876:intron
TCATTTAGATCAATATGATG+AGG 0.665709 5.1:-18096088 None:intergenic
AGTACCGATTGGATAAAGCA+AGG 0.686649 5.1:-18097914 None:intergenic
TATGTAGGTCGTTTCTACAG+GGG 0.695640 5.1:+18097572 MS.gene72876:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATACATTATAATTCTATTTA+GGG + chr5.1:18096376-18096395 MS.gene72876:intron 10.0%
!! TATACATTATAATTCTATTT+AGG + chr5.1:18096375-18096394 MS.gene72876:intron 10.0%
!! TATTTATTATATTCTCTATT+TGG + chr5.1:18096555-18096574 MS.gene72876:intron 10.0%
!!! AAATATATTTTTGTTCATAT+AGG + chr5.1:18097401-18097420 MS.gene72876:intron 10.0%
!!! ATATTGATAATATTAATTAG+TGG + chr5.1:18096999-18097018 MS.gene72876:intron 10.0%
!!! TGAAATTTTATAAAATTTGT+GGG + chr5.1:18096449-18096468 MS.gene72876:intron 10.0%
!!! TTGAAATTTTATAAAATTTG+TGG + chr5.1:18096448-18096467 MS.gene72876:intron 10.0%
!! AAAATGAAGTAACTATATAT+TGG - chr5.1:18097515-18097534 None:intergenic 15.0%
!! ATTATAATGTATATATTCCA+AGG - chr5.1:18096368-18096387 None:intergenic 15.0%
!! TAAATATCTCTATAGATAAA+AGG - chr5.1:18096954-18096973 None:intergenic 15.0%
!!! ATTTATATTTTGTGATATGT+AGG + chr5.1:18097557-18097576 MS.gene72876:intron 15.0%
!!! GAAATTTTATAAAATTTGTG+GGG + chr5.1:18096450-18096469 MS.gene72876:intron 15.0%
!! AATTTGTAGATAGTGTATTT+AGG + chr5.1:18097057-18097076 MS.gene72876:intron 20.0%
!! TCTAAATACTACAAAAAATG+TGG - chr5.1:18097208-18097227 None:intergenic 20.0%
!! TCTATAGATAAAAGGTAATT+GGG - chr5.1:18096946-18096965 None:intergenic 20.0%
!! TGTAGATTATTCCTATAAAA+GGG - chr5.1:18096859-18096878 None:intergenic 20.0%
!! TTGTAGATTATTCCTATAAA+AGG - chr5.1:18096860-18096879 None:intergenic 20.0%
! ATCATATTGATCTAAATGAG+AGG + chr5.1:18096092-18096111 MS.gene72876:CDS 25.0%
! ATGTTATCATCATTAGAGTT+TGG - chr5.1:18096211-18096230 None:intergenic 25.0%
! CTCTATAGATAAAAGGTAAT+TGG - chr5.1:18096947-18096966 None:intergenic 25.0%
! GCAAAGTAGACTTATAAAAA+GGG + chr5.1:18097101-18097120 MS.gene72876:intron 25.0%
! GCAAATTTAATCTTAGAGTA+AGG + chr5.1:18096681-18096700 MS.gene72876:intron 25.0%
! TCATTTAGATCAATATGATG+AGG - chr5.1:18096091-18096110 None:intergenic 25.0%
! TGCAAAGTAGACTTATAAAA+AGG + chr5.1:18097100-18097119 MS.gene72876:intron 25.0%
!! TTTCTTCTTCTCTATTTCTT+TGG - chr5.1:18097713-18097732 None:intergenic 25.0%
AAACAAACAGATACAAAGAC+TGG - chr5.1:18096534-18096553 None:intergenic 30.0%
AACAAACAGATACAAAGACT+GGG - chr5.1:18096533-18096552 None:intergenic 30.0%
AGTAGACTTATAAAAAGGGA+CGG + chr5.1:18097105-18097124 MS.gene72876:intron 30.0%
ATTAGCTATGTGATGACAAT+TGG - chr5.1:18097279-18097298 None:intergenic 30.0%
GGAATAATCTACAAAAATCG+AGG + chr5.1:18096866-18096885 MS.gene72876:intron 30.0%
GTAAGTATTCAATCTATCCT+TGG + chr5.1:18096348-18096367 MS.gene72876:intron 30.0%
TTGAATATCAGTAAAGTCAG+AGG + chr5.1:18097444-18097463 MS.gene72876:intron 30.0%
! TTCTCAAGTTTGTTCATATC+AGG - chr5.1:18097946-18097965 None:intergenic 30.0%
!! GTCATTGTCCTTGTTATTTA+AGG - chr5.1:18097860-18097879 None:intergenic 30.0%
!! TTGTTTTTCAATACGATGAG+TGG - chr5.1:18097809-18097828 None:intergenic 30.0%
!!! TGAGTATCAATTTTGGAGTA+AGG - chr5.1:18096830-18096849 None:intergenic 30.0%
AACCCAACAAATGTATCAGT+TGG + chr5.1:18097891-18097910 MS.gene72876:CDS 35.0%
ACATGTGTCTAGGTTTAGAT+TGG - chr5.1:18097337-18097356 None:intergenic 35.0%
ATATACTCGTATACCCGTTT+GGG + chr5.1:18096480-18096499 MS.gene72876:intron 35.0%
ATATGTAGGTCGTTTCTACA+GGG + chr5.1:18097571-18097590 MS.gene72876:intron 35.0%
CACAGCTACCTTAAATAACA+AGG + chr5.1:18097849-18097868 MS.gene72876:CDS 35.0%
CTCATCTTCACTCTATACTA+AGG + chr5.1:18096795-18096814 MS.gene72876:intron 35.0%
TATATACTCGTATACCCGTT+TGG + chr5.1:18096479-18096498 MS.gene72876:intron 35.0%
! ACTTTTCTCCGAATAGAGTA+GGG + chr5.1:18096706-18096725 MS.gene72876:intron 35.0%
! ATTAGAGTTTGGAATTGCGA+CGG - chr5.1:18096200-18096219 None:intergenic 35.0%
! GACAGAGTGAGTATCAATTT+TGG - chr5.1:18096837-18096856 None:intergenic 35.0%
! GACTATTGTGTCGTTGTTTA+AGG - chr5.1:18097761-18097780 None:intergenic 35.0%
! GCAAGTGTTTGCATTGTTTT+GGG + chr5.1:18097481-18097500 MS.gene72876:intron 35.0%
! TCTCTATTTCTTTGGCAGTT+TGG - chr5.1:18097705-18097724 None:intergenic 35.0%
! TGCAAGTGTTTGCATTGTTT+TGG + chr5.1:18097480-18097499 MS.gene72876:intron 35.0%
! TGTCAAGTTTCTCTTGTTGT+TGG - chr5.1:18096153-18096172 None:intergenic 35.0%
AAACAGATACAAAGACTGGG+AGG - chr5.1:18096530-18096549 None:intergenic 40.0%
AGACTTATAAAAAGGGACGG+AGG + chr5.1:18097108-18097127 MS.gene72876:intron 40.0%
AGCTAATGACTAGACACTCA+AGG + chr5.1:18097292-18097311 MS.gene72876:intron 40.0%
AGGCCAACTGATACATTTGT+TGG - chr5.1:18097897-18097916 None:intergenic 40.0%
CAACTCATCCCTACTCTATT+CGG - chr5.1:18096717-18096736 None:intergenic 40.0%
CCTAGACACATGTAGAACAA+CGG + chr5.1:18097344-18097363 MS.gene72876:intron 40.0%
GAAGTCATGAAGCAAAGAGA+GGG + chr5.1:18096287-18096306 MS.gene72876:CDS 40.0%
GATATGTAGGTCGTTTCTAC+AGG + chr5.1:18097570-18097589 MS.gene72876:intron 40.0%
GCATGACTAGCAATTTGAGT+TGG - chr5.1:18097661-18097680 None:intergenic 40.0%
GCTAATGACTAGACACTCAA+GGG + chr5.1:18097293-18097312 MS.gene72876:intron 40.0%
GGCCAACTGATACATTTGTT+GGG - chr5.1:18097896-18097915 None:intergenic 40.0%
TATGTAGGTCGTTTCTACAG+GGG + chr5.1:18097572-18097591 MS.gene72876:intron 40.0%
TTTGCTTCATGACTTCCTTC+TGG - chr5.1:18096283-18096302 None:intergenic 40.0%
! ACTCACTCTGTCCCTTTTAT+AGG + chr5.1:18096845-18096864 MS.gene72876:intron 40.0%
! CTATTTCTTTGGCAGTTTGG+TGG - chr5.1:18097702-18097721 None:intergenic 40.0%
! GACTTTTCTCCGAATAGAGT+AGG + chr5.1:18096705-18096724 MS.gene72876:intron 40.0%
! TAAGGAAAGGGTACATTGGA+CGG + chr5.1:18096312-18096331 MS.gene72876:CDS 40.0%
! TTTAAGGTAGCTGTGTCTTG+AGG - chr5.1:18097844-18097863 None:intergenic 40.0%
!! AGTACCGATTGGATAAAGCA+AGG - chr5.1:18097917-18097936 None:intergenic 40.0%
!! GCGCAACTTGTTTAACTTGT+TGG + chr5.1:18097969-18097988 MS.gene72876:CDS 40.0%
!! TGGCTTCTTGTTGTTCAAGA+GGG - chr5.1:18097789-18097808 None:intergenic 40.0%
!! TTGGCCTTGCTTTATCCAAT+CGG + chr5.1:18097910-18097929 MS.gene72876:CDS 40.0%
AAAAACATGGTAGGGGACGT+TGG + chr5.1:18097599-18097618 MS.gene72876:CDS 45.0%
AATGACTAGACACTCAAGGG+TGG + chr5.1:18097296-18097315 MS.gene72876:intron 45.0%
AGGGGGTGAAAAAACATGGT+AGG + chr5.1:18097590-18097609 MS.gene72876:CDS 45.0%
ATGTAGGTCGTTTCTACAGG+GGG + chr5.1:18097573-18097592 MS.gene72876:intron 45.0%
CCGTTGTTCTACATGTGTCT+AGG - chr5.1:18097347-18097366 None:intergenic 45.0%
CTACAGGGGGTGAAAAAACA+TGG + chr5.1:18097586-18097605 MS.gene72876:CDS 45.0%
GGAAGTCATGAAGCAAAGAG+AGG + chr5.1:18096286-18096305 MS.gene72876:CDS 45.0%
GGGGGTGAAAAAACATGGTA+GGG + chr5.1:18097591-18097610 MS.gene72876:CDS 45.0%
GGGGTGAAAAAACATGGTAG+GGG + chr5.1:18097592-18097611 MS.gene72876:CDS 45.0%
GTTGGTCCATGCTATTCTCA+GGG - chr5.1:18096135-18096154 None:intergenic 45.0%
TACAAAGACTGGGAGGACAT+TGG - chr5.1:18096523-18096542 None:intergenic 45.0%
TGACACTGATGTCGTTGAGT+CGG + chr5.1:18096168-18096187 MS.gene72876:CDS 45.0%
TGACCCAGGATTAACCCAAA+CGG - chr5.1:18096497-18096516 None:intergenic 45.0%
TGTTGGTCCATGCTATTCTC+AGG - chr5.1:18096136-18096155 None:intergenic 45.0%
TTGGTCCATGCTATTCTCAG+GGG - chr5.1:18096134-18096153 None:intergenic 45.0%
! AAAGAGAGGGCGTAAGGAAA+GGG + chr5.1:18096300-18096319 MS.gene72876:CDS 45.0%
! ATACCCGTTTGGGTTAATCC+TGG + chr5.1:18096490-18096509 MS.gene72876:intron 45.0%
! TACCCGTTTGGGTTAATCCT+GGG + chr5.1:18096491-18096510 MS.gene72876:intron 45.0%
!! GTGGCTTCTTGTTGTTCAAG+AGG - chr5.1:18097790-18097809 None:intergenic 45.0%
AAGGTAGCTGTGTCTTGAGG+AGG - chr5.1:18097841-18097860 None:intergenic 50.0%
AGATCCCCCTGAGAATAGCA+TGG + chr5.1:18096126-18096145 MS.gene72876:CDS 50.0%
CAAGCTGAGTCAGTACCAGA+AGG + chr5.1:18096265-18096284 MS.gene72876:CDS 50.0%
GACACTGATGTCGTTGAGTC+GGG + chr5.1:18096169-18096188 MS.gene72876:CDS 50.0%
GACCCAGGATTAACCCAAAC+GGG - chr5.1:18096496-18096515 None:intergenic 50.0%
TGGTCCATGCTATTCTCAGG+GGG - chr5.1:18096133-18096152 None:intergenic 50.0%
! CAAAGAGAGGGCGTAAGGAA+AGG + chr5.1:18096299-18096318 MS.gene72876:CDS 50.0%
! GAAAGGGTACATTGGACGGA+AGG + chr5.1:18096316-18096335 MS.gene72876:CDS 50.0%
! GGCGTAAGGAAAGGGTACAT+TGG + chr5.1:18096308-18096327 MS.gene72876:CDS 50.0%
! GTTTGGGTTAATCCTGGGTC+AGG + chr5.1:18096496-18096515 MS.gene72876:intron 50.0%
! TGAAGCAAAGAGAGGGCGTA+AGG + chr5.1:18096294-18096313 MS.gene72876:CDS 50.0%
!! TCAGGAAGTGCAGTACCGAT+TGG - chr5.1:18097928-18097947 None:intergenic 50.0%
GACACTCAAGGGTGGAGAAC+TGG + chr5.1:18097304-18097323 MS.gene72876:intron 55.0%
GAGGACATTGGACCTGACCC+AGG - chr5.1:18096511-18096530 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 18096061 18098005 18096061 ID=MS.gene72876
chr5.1 mRNA 18096061 18098005 18096061 ID=MS.gene72876.t1;Parent=MS.gene72876
chr5.1 exon 18096061 18096347 18096061 ID=MS.gene72876.t1.exon1;Parent=MS.gene72876.t1
chr5.1 CDS 18096061 18096347 18096061 ID=cds.MS.gene72876.t1;Parent=MS.gene72876.t1
chr5.1 exon 18097579 18098005 18097579 ID=MS.gene72876.t1.exon2;Parent=MS.gene72876.t1
chr5.1 CDS 18097579 18098005 18097579 ID=cds.MS.gene72876.t1;Parent=MS.gene72876.t1
Gene Sequence

>MS.gene72876

ATGGAAGGAAGAAAAGTTCAACAATTACCTCATCATATTGATCTAAATGAGAGGACTTCAATTCAAGATCCCCCTGAGAATAGCATGGACCAACAACAAGAGAAACTTGACACTGATGTCGTTGAGTCGGGTTGTGCCGTCGCAATTCCAAACTCTAATGATGATAACATTGCGACTCTAAACTCTAATGATAATAACTTAGTTCAAGCTGAGTCAGTACCAGAAGGAAGTCATGAAGCAAAGAGAGGGCGTAAGGAAAGGGTACATTGGACGGAAGGTGAACATAAGTAAGTATTCAATCTATCCTTGGAATATATACATTATAATTCTATTTAGGGTTAAATATATTTGATCAATTGAAGTTATTAGATATGTATTAAATAGTTTTTGAAATTTTATAAAATTTGTGGGGAGTTGATATATACTCGTATACCCGTTTGGGTTAATCCTGGGTCAGGTCCAATGTCCTCCCAGTCTTTGTATCTGTTTGTTTTTATTTATTATATTCTCTATTTGGCTTAAAAAATATATATATACTTAATACTCAACAGTGATGAATGAATCATATGTTTACAATGAATTTTTCTTTTTTGAAATGTATCTTTACGATGTAACTCTATGCAAATTTAATCTTAGAGTAAGGTGACTTTTCTCCGAATAGAGTAGGGATGAGTTGACTCAGAAGTAACTCTAAGATAACTTCTCTTTATATTTTACTAAGCACAATAACTCAACTCATCTTCACTCTATACTAAGGAGATACTCACCTTACTCCAAAATTGATACTCACTCTGTCCCTTTTATAGGAATAATCTACAAAAATCGAGGTATTAAGAAAAATGTTTGAAGTAGTAAATATTTTATAAATGTATGTTACTATTACCCAATTACCTTTTATCTATAGAGATATTTAATGTTAACTTTTCAAATTTCAATGTATATTGATAATATTAATTAGTGGTGTATTTAAAAAAAAAAGTAATAAATGCATCTAAAAATTTGTAGATAGTGTATTTAGGAACAATTTTTTTTTTTTTTTTGCAAAGTAGACTTATAAAAAGGGACGGAGGAGTGAATCATTATAAATATTGAATTCATAAATTCAACATCACATCAAAAGTTCTTATTAAATACTATATCAACTCCACATTTTTTGTAGTATTTAGATTTTAGAAACTGTTTAATATTTCATCAAATAATTTCGATGAGTAAATACCAATTGTCATCACATAGCTAATGACTAGACACTCAAGGGTGGAGAACTGGAAAATCTCCAATCTAAACCTAGACACATGTAGAACAACGGATAAAAAATCACACATATACAGTAGCTTTTTAGAAAATATATTTTTGTTCATATAGGTGCATATTAATATTTCTATGTTGAATATCAGTAAAGTCAGAGGAAAAAAAAATCAATGCAAGTGTTTGCATTGTTTTGGGTACATATACCAATATATAGTTACTTCATTTTTCTTCTCTTGTTATTTAATTGAATTTATATTTTGTGATATGTAGGTCGTTTCTACAGGGGGTGAAAAAACATGGTAGGGGACGTTGGAAAGATATTTCAAAAGAATTTGTGCGAACAAAAACTCCAACTCAAATTGCTAGTCATGCTCAAAAATACTTTGTTCACCACCAAACTGCCAAAGAAATAGAGAAGAAGAAAAAGAGAAGAAGTATTCACGACATAACCTTAAACAACGACACAATAGTCACTCTCCCTCTTGAACAACAAGAAGCCACTCATCGTATTGAAAAACAACATGAAATTCCTCCTCAAGACACAGCTACCTTAAATAACAAGGACAATGACAACTTGCAACAAACCCAACAAATGTATCAGTTGGCCTTGCTTTATCCAATCGGTACTGCACTTCCTGATATGAACAAACTTGAGAAGATGCGCAACTTGTTTAACTTGTTGGCAAAAGACCTTTGA
Protein sequence

>MS.gene72876.t1

MEGRKVQQLPHHIDLNERTSIQDPPENSMDQQQEKLDTDVVESGCAVAIPNSNDDNIATLNSNDNNLVQAESVPEGSHEAKRGRKERVHWTEGEHKSFLQGVKKHGRGRWKDISKEFVRTKTPTQIASHAQKYFVHHQTAKEIEKKKKRRSIHDITLNNDTIVTLPLEQQEATHRIEKQHEIPPQDTATLNNKDNDNLQQTQQMYQLALLYPIGTALPDMNKLEKMRNLFNLLAKDL