AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene73580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene73580.t1 MTR_7g027190 98.080 677 10 2 1 677 1 674 0.0 1374
MS.gene73580.t1 MTR_4g104020 41.604 399 211 6 291 677 133 521 2.25e-96 307
MS.gene73580.t1 MTR_3g065980 35.810 525 269 13 187 677 51 541 1.32e-92 298
MS.gene73580.t1 MTR_7g074650 41.910 377 186 6 307 676 442 792 2.62e-92 304
MS.gene73580.t1 MTR_8g442410 40.863 394 206 6 295 676 147 525 4.01e-88 286
MS.gene73580.t1 MTR_5g097480 40.712 393 203 6 296 676 170 544 3.78e-87 283
MS.gene73580.t1 MTR_4g102790 38.046 389 218 6 297 675 286 661 5.16e-82 273
MS.gene73580.t1 MTR_1g029420 39.175 388 204 5 302 676 224 592 1.43e-80 267
MS.gene73580.t1 MTR_2g082090 36.721 433 238 5 261 675 164 578 1.68e-78 261
MS.gene73580.t1 MTR_5g094450 33.406 461 267 7 236 676 92 532 1.38e-77 258
MS.gene73580.t1 MTR_3g056110 32.975 558 292 12 165 676 21 542 3.11e-77 257
MS.gene73580.t1 MTR_3g089055 37.468 387 212 4 302 676 202 570 5.90e-76 254
MS.gene73580.t1 MTR_3g089055 37.468 387 212 4 302 676 197 565 6.46e-76 254
MS.gene73580.t1 MTR_4g076020 39.305 374 191 11 307 676 88 429 9.49e-72 239
MS.gene73580.t1 MTR_4g133660 35.696 395 219 6 298 677 170 544 1.69e-70 239
MS.gene73580.t1 MTR_2g026250 33.666 401 219 8 298 677 223 597 6.40e-68 233
MS.gene73580.t1 MTR_1g069725 35.385 390 223 10 293 677 99 464 8.44e-66 224
MS.gene73580.t1 MTR_4g064160 34.500 400 232 7 289 675 301 683 4.16e-65 228
MS.gene73580.t1 MTR_5g058860 36.930 417 210 17 291 677 105 498 2.75e-64 221
MS.gene73580.t1 MTR_1g096030 34.140 413 220 14 293 676 70 459 9.64e-64 219
MS.gene73580.t1 MTR_3g072710 37.101 407 219 14 293 677 110 501 2.72e-63 219
MS.gene73580.t1 MTR_3g022830 30.374 428 226 6 304 676 26 436 1.59e-61 212
MS.gene73580.t1 MTR_7g062120 32.908 392 232 5 298 676 367 740 4.14e-59 212
MS.gene73580.t1 MTR_4g064120 32.161 398 233 5 294 673 245 623 4.35e-59 210
MS.gene73580.t1 MTR_4g064180 32.161 398 233 5 294 673 245 623 7.14e-58 207
MS.gene73580.t1 MTR_4g064200 31.714 391 234 7 298 675 279 649 2.02e-56 203
MS.gene73580.t1 MTR_2g097410 31.392 395 236 6 297 675 365 740 2.23e-56 204
MS.gene73580.t1 MTR_2g097310 30.848 389 240 6 298 675 267 637 3.23e-56 202
MS.gene73580.t1 MTR_4g064150 31.920 401 236 7 293 675 351 732 9.27e-56 202
MS.gene73580.t1 MTR_2g097390 30.334 389 242 6 298 675 270 640 1.82e-54 197
MS.gene73580.t1 MTR_2g097467 29.517 393 243 4 296 675 282 653 1.02e-53 196
MS.gene73580.t1 MTR_4g097080 30.412 388 241 9 302 676 132 503 4.06e-53 191
MS.gene73580.t1 MTR_2g097350 29.923 391 241 7 298 675 269 639 1.23e-52 192
MS.gene73580.t1 MTR_2g097473 30.227 397 235 8 296 675 282 653 1.35e-50 187
MS.gene73580.t1 MTR_4g077760 33.962 371 208 8 319 676 209 555 1.38e-50 185
MS.gene73580.t1 MTR_2g097463 28.462 390 247 6 298 675 285 654 3.24e-49 183
MS.gene73580.t1 MTR_2g034250 31.514 403 248 9 289 676 196 585 8.04e-49 181
MS.gene73580.t1 MTR_5g015490 30.923 401 240 11 296 676 107 490 8.58e-48 176
MS.gene73580.t1 MTR_2g097380 29.235 366 205 6 319 675 240 560 4.15e-47 175
MS.gene73580.t1 MTR_2g034280 30.273 403 250 11 289 676 189 575 2.60e-46 173
MS.gene73580.t1 MTR_2g034260 31.172 401 251 11 289 676 196 584 5.46e-46 172
MS.gene73580.t1 MTR_7g109580 29.648 398 252 10 289 676 175 554 7.67e-44 166
MS.gene73580.t1 MTR_2g089100 28.186 408 241 10 303 675 52 442 3.85e-42 159
MS.gene73580.t1 MTR_8g093070 32.426 404 221 15 290 675 126 495 4.24e-42 160
MS.gene73580.t1 MTR_1g086970 28.571 406 265 11 286 676 83 478 4.17e-41 157
MS.gene73580.t1 MTR_5g009080 36.842 228 128 2 292 519 45 256 2.02e-40 155
MS.gene73580.t1 MTR_5g009080 43.624 149 84 0 528 676 330 478 7.67e-39 150
MS.gene73580.t1 MTR_4g076140 44.595 148 82 0 529 676 322 469 2.61e-39 151
MS.gene73580.t1 MTR_4g076140 34.211 228 134 2 292 519 37 248 1.53e-34 137
MS.gene73580.t1 MTR_7g057230 34.007 297 175 8 395 675 365 656 2.18e-38 151
MS.gene73580.t1 MTR_0092s0100 27.720 386 246 9 300 677 369 729 1.05e-34 141
MS.gene73580.t1 MTR_0092s0100 27.720 386 246 9 300 677 372 732 1.11e-34 141
MS.gene73580.t1 MTR_6g047750 29.383 405 216 13 304 676 296 662 6.21e-34 138
MS.gene73580.t1 MTR_2g099110 26.076 395 254 10 303 676 74 451 2.09e-32 131
MS.gene73580.t1 MTR_4g095500 25.714 420 254 9 303 675 59 467 2.41e-32 131
MS.gene73580.t1 MTR_4g026485 28.906 384 235 11 304 677 270 625 4.87e-32 132
MS.gene73580.t1 MTR_5g015950 25.060 419 260 10 303 675 35 445 5.82e-31 127
MS.gene73580.t1 MTR_3g053270 25.060 419 260 10 303 675 35 445 5.82e-31 127
MS.gene73580.t1 MTR_8g077940 27.226 393 242 14 300 677 179 542 9.50e-29 121
MS.gene73580.t1 MTR_3g022580 41.441 111 64 1 566 676 74 183 2.32e-22 95.5
MS.gene73580.t1 MTR_8g020840 23.716 409 248 13 302 676 170 548 9.19e-20 94.0
MS.gene73580.t1 MTR_3g022005 41.176 102 59 1 575 676 25 125 9.28e-20 86.3
MS.gene73580.t1 MTR_1g106590 30.657 137 79 2 294 430 121 241 2.65e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene73580.t1 AT1G66350 43.846 390 185 10 294 677 146 507 5.36e-97 308
MS.gene73580.t1 AT3G03450 42.347 392 197 9 294 676 174 545 1.00e-94 303
MS.gene73580.t1 AT3G54220 41.709 398 196 6 288 675 278 649 1.41e-92 301
MS.gene73580.t1 AT1G14920 39.949 393 200 8 294 676 163 529 3.40e-89 288
MS.gene73580.t1 AT5G17490 42.711 391 191 10 294 676 151 516 1.86e-88 286
MS.gene73580.t1 AT2G01570 40.458 393 198 10 294 676 215 581 4.84e-87 284
MS.gene73580.t1 AT5G41920 40.759 395 202 9 290 676 30 400 2.30e-86 277
MS.gene73580.t1 AT2G04890 40.204 393 208 5 290 676 42 413 1.85e-83 270
MS.gene73580.t1 AT5G48150 38.442 385 208 4 304 676 123 490 3.34e-83 271
MS.gene73580.t1 AT5G48150 38.442 385 208 4 304 676 123 490 3.34e-83 271
MS.gene73580.t1 AT5G48150 38.442 385 208 4 304 676 123 490 3.34e-83 271
MS.gene73580.t1 AT5G48150 38.442 385 208 4 304 676 123 490 3.34e-83 271
MS.gene73580.t1 AT1G50600 39.075 389 207 7 300 676 156 526 1.23e-73 247
MS.gene73580.t1 AT1G50600 39.075 389 207 7 300 676 227 597 3.49e-73 248
MS.gene73580.t1 AT1G50600 39.075 389 207 7 300 676 231 601 4.50e-73 248
MS.gene73580.t1 AT1G21450 36.176 387 218 3 302 676 224 593 7.15e-72 244
MS.gene73580.t1 AT1G55580 37.192 406 227 8 299 676 40 445 3.77e-71 238
MS.gene73580.t1 AT4G17230 36.061 391 220 4 298 676 153 525 3.50e-67 230
MS.gene73580.t1 AT4G17230 36.061 391 220 4 298 676 153 525 3.50e-67 230
MS.gene73580.t1 AT1G63100 34.343 396 228 6 298 675 247 628 6.89e-66 229
MS.gene73580.t1 AT1G63100 34.343 396 228 6 298 675 272 653 1.15e-65 229
MS.gene73580.t1 AT1G07520 31.762 403 245 8 289 675 140 528 6.68e-59 207
MS.gene73580.t1 AT1G07520 31.762 403 245 8 289 675 140 528 6.68e-59 207
MS.gene73580.t1 AT1G07520 31.592 402 247 7 289 675 305 693 2.89e-58 209
MS.gene73580.t1 AT1G07520 31.592 402 247 7 289 675 304 692 3.05e-58 209
MS.gene73580.t1 AT5G59450 29.442 394 246 6 298 676 222 598 2.14e-57 205
MS.gene73580.t1 AT3G46600 29.825 399 248 4 291 676 200 579 1.02e-56 202
MS.gene73580.t1 AT3G46600 30.326 399 246 5 291 676 168 547 1.98e-56 201
MS.gene73580.t1 AT3G46600 30.670 388 237 5 302 676 3 371 1.31e-55 194
MS.gene73580.t1 AT1G07530 32.051 390 233 7 300 675 393 764 2.18e-55 202
MS.gene73580.t1 AT2G29065 29.820 389 244 8 303 675 252 627 7.46e-55 198
MS.gene73580.t1 AT5G66770 35.038 391 217 10 300 676 217 584 2.12e-53 193
MS.gene73580.t1 AT2G29060 30.867 392 237 7 300 675 281 654 4.43e-53 194
MS.gene73580.t1 AT2G29060 30.867 392 237 7 300 675 318 691 6.36e-53 194
MS.gene73580.t1 AT2G37650 29.923 391 243 5 298 676 330 701 1.64e-52 193
MS.gene73580.t1 AT2G37650 29.923 391 243 5 298 676 342 713 2.01e-52 193
MS.gene73580.t1 AT4G08250 32.187 407 229 14 291 675 95 476 8.24e-49 178
MS.gene73580.t1 AT3G50650 32.884 371 209 8 323 676 195 542 8.86e-46 171
MS.gene73580.t1 AT4G37650 29.397 398 243 10 303 676 146 529 2.85e-43 164
MS.gene73580.t1 AT5G52510 30.250 400 224 9 304 676 269 640 6.56e-40 156
MS.gene73580.t1 AT1G50420 45.333 150 82 0 528 677 331 480 7.34e-39 150
MS.gene73580.t1 AT1G50420 38.053 226 126 2 294 519 48 259 2.63e-38 149
MS.gene73580.t1 AT3G49950 28.678 401 237 10 302 675 29 407 9.91e-33 131
MS.gene73580.t1 AT2G45160 27.829 327 204 9 370 677 327 640 1.89e-28 121
MS.gene73580.t1 AT3G60630 28.852 305 191 10 391 677 327 623 8.29e-28 119
MS.gene73580.t1 AT4G36710 26.884 398 256 12 290 676 112 485 2.81e-27 116
MS.gene73580.t1 AT4G00150 27.182 401 239 13 285 677 200 555 4.04e-27 116
MS.gene73580.t1 AT3G13840 24.304 395 246 13 303 676 148 510 3.68e-14 76.3

Find 168 sgRNAs with CRISPR-Local

Find 207 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTCCAATATCAACAATTT+TGG 0.134391 7.1:+69958825 MS.gene73580:CDS
TGTTGCATATATTGATTATT+TGG 0.203768 7.1:-69958694 None:intergenic
GTAGAAGCTTGTGGTGAATT+AGG 0.209436 7.1:-69958511 None:intergenic
TGTATTCATGTGATGGTTAT+AGG 0.213345 7.1:+69960605 MS.gene73580:CDS
CTATCCAAAATTGTTGATAT+TGG 0.238972 7.1:-69958829 None:intergenic
GACTCAATCAAGGATATTAT+TGG 0.253341 7.1:+69960579 MS.gene73580:CDS
TGCCTCAAACGCCTCGAAAA+TGG 0.275785 7.1:-69959912 None:intergenic
GCCAGCTATTGAAGAGTTCT+TGG 0.285111 7.1:+69958735 MS.gene73580:CDS
GATGGTAAGTTTAGGCTTTG+TGG 0.292426 7.1:-69958358 None:intergenic
GTTAGGGTTAATGTTTCTAA+TGG 0.293041 7.1:-69958488 None:intergenic
TAGAAGCTTGTGGTGAATTA+GGG 0.297220 7.1:-69958510 None:intergenic
GACATGAGAGGTTGGAGAAA+TGG 0.307042 7.1:+69960500 MS.gene73580:CDS
AACCGTCTCCACCGTGTTCC+CGG 0.311262 7.1:+69960217 MS.gene73580:CDS
CTTGATTGAGTCACTGCATT+AGG 0.311878 7.1:-69960568 None:intergenic
GTATCATCAAATGGGATCTA+TGG 0.314373 7.1:+69958957 MS.gene73580:CDS
AGTAATAATAATCAACAAAA+AGG 0.314813 7.1:+69958634 MS.gene73580:CDS
TCATGAAATCGTTATCTAAA+TGG 0.317694 7.1:-69958456 None:intergenic
TCTCTCAAATTTGACTTAGA+TGG 0.323118 7.1:+69958379 MS.gene73580:CDS
TTGACGATGACTTGGTTGTT+AGG 0.350400 7.1:-69959736 None:intergenic
CATCGACCTTGATATCCTTC+AGG 0.351187 7.1:+69959952 MS.gene73580:CDS
ACTCAATCAAGGATATTATT+GGG 0.352700 7.1:+69960580 MS.gene73580:CDS
ATTTGTTTGATTTGAAGAAT+TGG 0.357982 7.1:-69958272 None:intergenic
TAGGTTCCCGAGATGATTCC+CGG 0.366163 7.1:-69960236 None:intergenic
GGCAAGCTTGGTAGACGATT+TGG 0.373266 7.1:-69959853 None:intergenic
CCGCCGTGTAGGCGAGGCTT+TGG 0.375077 7.1:+69960180 MS.gene73580:CDS
GGTCTCTTATCATGGACAAT+AGG 0.375559 7.1:-69960255 None:intergenic
GCTTGTGGTGAATTAGGGTT+AGG 0.379242 7.1:-69958505 None:intergenic
TATAGGTTAACTGAGGATAA+AGG 0.379685 7.1:+69960622 MS.gene73580:CDS
ATAAAGGTTGTTTGTTGCTT+GGG 0.381702 7.1:+69960638 MS.gene73580:CDS
GTCACTGCATTAGGACTTAG+AGG 0.385725 7.1:-69960559 None:intergenic
CTAACAGTTCCTATTCCAAT+TGG 0.386725 7.1:+69959060 MS.gene73580:CDS
TGGTGCTTGGTCTCTTATCA+TGG 0.387315 7.1:-69960263 None:intergenic
GATAAAGGTTGTTTGTTGCT+TGG 0.388205 7.1:+69960637 MS.gene73580:CDS
CCATGCAGAAGCAGCGATAA+TGG 0.390323 7.1:-69960674 None:intergenic
GCTTCCCACATTGAACTATC+TGG 0.392042 7.1:-69958421 None:intergenic
TTTGTTTGATTTGAAGAATT+GGG 0.395359 7.1:-69958271 None:intergenic
AAGACTTCCATAGGGTTTGA+TGG 0.397500 7.1:-69959821 None:intergenic
TCCTCAAGTTGTTCTCCAAC+GGG 0.400097 7.1:-69960136 None:intergenic
GCCAATGCCTGCATGAATGC+AGG 0.402364 7.1:-69959986 None:intergenic
ATGCAAATTCAAAGCCTATC+AGG 0.406320 7.1:+69958568 MS.gene73580:CDS
CAGGCATTGGCTGCACGGCC+CGG 0.413918 7.1:+69959998 MS.gene73580:CDS
CACAAGCTTTACAACAAGAA+AGG 0.417444 7.1:+69958995 MS.gene73580:CDS
ATTTGAGAGATGGTAAGTTT+AGG 0.417615 7.1:-69958366 None:intergenic
TTAGGGTTAATGTTTCTAAT+GGG 0.423047 7.1:-69958487 None:intergenic
GAGTGATATGTATCATCAAA+TGG 0.430639 7.1:+69958948 MS.gene73580:CDS
TCCACAAGTGTCACTATGTT+TGG 0.431028 7.1:-69960283 None:intergenic
ATCGAATCAGTCAGGGAAAC+CGG 0.433300 7.1:+69960061 MS.gene73580:CDS
ATATATTTGCACCGGAGATT+CGG 0.433485 7.1:+69960440 MS.gene73580:CDS
CTCGAAAATGGCTTGGTTAG+CGG 0.435294 7.1:-69959900 None:intergenic
TCATGCAGGCATTGGCTGCA+CGG 0.438295 7.1:+69959993 MS.gene73580:CDS
AATGCAAAGCCTCAAGAAAT+CGG 0.441426 7.1:-69960342 None:intergenic
GGAGAAATGGAGGAAGATAA+TGG 0.442415 7.1:+69960513 MS.gene73580:CDS
AAAATGATGAATTCACTTTG+TGG 0.443783 7.1:+69958214 None:intergenic
TCCCTGACTGATTCGATGCA+CGG 0.445153 7.1:-69960055 None:intergenic
ATTACCTGCTCAATTCCAAT+TGG 0.449064 7.1:-69959075 None:intergenic
CCTGAGGAACGGAGCACCGC+CGG 0.452080 7.1:-69960017 None:intergenic
GGCCGTGCATCGAATCAGTC+AGG 0.452889 7.1:+69960053 MS.gene73580:CDS
GATAGAGAGACATGAGAGGT+TGG 0.454325 7.1:+69960492 MS.gene73580:CDS
CAAAATTCTTCAAGCTATTG+TGG 0.454394 7.1:+69958862 MS.gene73580:CDS
TGCTCAATTCCAATTGGAAT+AGG 0.456239 7.1:-69959069 None:intergenic
CCGGCGGTGCTCCGTTCCTC+AGG 0.458407 7.1:+69960017 MS.gene73580:CDS
GCCACGATGTTCCGAATCTC+CGG 0.464344 7.1:-69960451 None:intergenic
CCGTGTAGGCGAGGCTTTGG+CGG 0.466492 7.1:+69960183 MS.gene73580:CDS
TAAATCACCACACGAATTTG+TGG 0.467085 7.1:-69958314 None:intergenic
GCCCTTGGTGCTGACTCCAC+TGG 0.468773 7.1:-69960403 None:intergenic
ACATTGAACTATCTGGTGAT+TGG 0.469373 7.1:-69958414 None:intergenic
TACTGCTCCACCTTAGCCCT+TGG 0.470876 7.1:-69960418 None:intergenic
TAGATCTTCAAGACTTCCAT+AGG 0.471572 7.1:-69959830 None:intergenic
CTTGTGGTGAATTAGGGTTA+GGG 0.477041 7.1:-69958504 None:intergenic
ATGAGAGGTTGGAGAAATGG+AGG 0.478165 7.1:+69960503 MS.gene73580:CDS
TCCAAGAACTCTTCAATAGC+TGG 0.478205 7.1:-69958736 None:intergenic
TGTGCTGAAGCAGTGGCAAA+AGG 0.478803 7.1:+69959590 MS.gene73580:CDS
TATTCCAATTGGAATTGAGC+AGG 0.485481 7.1:+69959071 MS.gene73580:CDS
CACTGGAAAAGTGGCGTCCA+AGG 0.486197 7.1:-69960386 None:intergenic
TGACGATGACTTGGTTGTTA+GGG 0.486440 7.1:-69959735 None:intergenic
TTCCATAGGGTTTGATGGGA+AGG 0.488537 7.1:-69959816 None:intergenic
ATCGACCTTGATATCCTTCA+GGG 0.491571 7.1:+69959953 MS.gene73580:CDS
GCCTGCATTCATGCAGGCAT+TGG 0.492416 7.1:+69959985 MS.gene73580:CDS
AACACGGTGGAGACGGTTAA+CGG 0.494992 7.1:-69960212 None:intergenic
GTGTTCCCGGGAATCATCTC+GGG 0.501194 7.1:+69960230 MS.gene73580:CDS
GTGTCACTATGTTTGGTGCT+TGG 0.501545 7.1:-69960276 None:intergenic
CCGCCAAAGCCTCGCCTACA+CGG 0.501971 7.1:-69960183 None:intergenic
TAACTCTGTTAAGCATCGTC+CGG 0.502256 7.1:-69960080 None:intergenic
GTGCTGAAGCAGTGGCAAAA+GGG 0.503557 7.1:+69959591 MS.gene73580:CDS
ACCGTCTCCACCGTGTTCCC+GGG 0.504562 7.1:+69960218 MS.gene73580:CDS
AGTGATATGTATCATCAAAT+GGG 0.505152 7.1:+69958949 MS.gene73580:CDS
TACCTTCCCATCAAACCCTA+TGG 0.506323 7.1:+69959814 MS.gene73580:CDS
CGTGTTCCCGGGAATCATCT+CGG 0.511769 7.1:+69960229 MS.gene73580:CDS
AGACTTCCATAGGGTTTGAT+GGG 0.516705 7.1:-69959820 None:intergenic
GGAAGATAATGGAAGGGAAA+GGG 0.523029 7.1:+69960524 MS.gene73580:CDS
TCCAGTGGAGTCAGCACCAA+GGG 0.523663 7.1:+69960402 MS.gene73580:CDS
GCATTGGCTGCACGGCCCGG+CGG 0.530002 7.1:+69960001 MS.gene73580:CDS
CCAATGGCCTGCATTCATGC+AGG 0.532300 7.1:+69959979 MS.gene73580:CDS
TTCCTCAGGATCACCGGAGT+AGG 0.532556 7.1:+69960031 MS.gene73580:CDS
CCCTTCGAGTTCCACCCCGT+TGG 0.536028 7.1:+69960121 MS.gene73580:CDS
GCTCCGTTCCTCAGGATCAC+CGG 0.536387 7.1:+69960025 MS.gene73580:CDS
CCAACGGGGTGGAACTCGAA+GGG 0.537973 7.1:-69960121 None:intergenic
CAGGCCATTGGTAGCCCTGA+AGG 0.538080 7.1:-69959967 None:intergenic
CTGAGGAACGGAGCACCGCC+GGG 0.538484 7.1:-69960016 None:intergenic
AGAATCTCTAAGTGCAAGAC+TGG 0.538771 7.1:+69959706 MS.gene73580:CDS
TCCCGGGAACACGGTGGAGA+CGG 0.538884 7.1:-69960219 None:intergenic
GGAGTCAGCACCAAGGGCTA+AGG 0.543556 7.1:+69960408 MS.gene73580:CDS
ATCCTCAAGTTGTTCTCCAA+CGG 0.543558 7.1:-69960137 None:intergenic
CTAATGCAGTGACTCAATCA+AGG 0.544135 7.1:+69960569 MS.gene73580:CDS
TTGGGTTTGTATTCATGTGA+TGG 0.544918 7.1:+69960598 MS.gene73580:CDS
CGGAACATCGTGGCATGTGA+AGG 0.545048 7.1:+69960460 MS.gene73580:CDS
TCCTCAGGATCACCGGAGTA+GGG 0.548701 7.1:+69960032 MS.gene73580:CDS
AAGGTTGTTTGTTGCTTGGG+TGG 0.550029 7.1:+69960641 MS.gene73580:CDS
CAAACGCCTCGAAAATGGCT+TGG 0.554574 7.1:-69959907 None:intergenic
TGCTGACTCCACTGGAAAAG+TGG 0.556661 7.1:-69960395 None:intergenic
TCTAAGTCAAATTTGAGAGA+TGG 0.557349 7.1:-69958376 None:intergenic
TGTAACTATAACTATGCTCA+AGG 0.559054 7.1:+69958544 MS.gene73580:CDS
GTCAGCACCAAGGGCTAAGG+TGG 0.559830 7.1:+69960411 MS.gene73580:CDS
TGCTGAAGCAGTGGCAAAAG+GGG 0.561256 7.1:+69959592 MS.gene73580:CDS
TTCGATGCACGGCCCTACTC+CGG 0.562130 7.1:-69960044 None:intergenic
ATGGAAGGGAAAGGGTTCAA+AGG 0.562746 7.1:+69960532 MS.gene73580:CDS
GGTAGCCCTGAAGGATATCA+AGG 0.563155 7.1:-69959958 None:intergenic
GGATATCAAGGTCGATGACA+TGG 0.564199 7.1:-69959946 None:intergenic
CGAGATGATTCCCGGGAACA+CGG 0.573113 7.1:-69960228 None:intergenic
AAATGGAGGAAGATAATGGA+AGG 0.574690 7.1:+69960517 MS.gene73580:CDS
GAGGTGGTGAACAACCTGAT+AGG 0.574741 7.1:-69958582 None:intergenic
ACATGAAGCTACTCGTTGCA+TGG 0.580886 7.1:-69959678 None:intergenic
CCATTATCGCTGCTTCTGCA+TGG 0.581952 7.1:+69960674 MS.gene73580:CDS
TCCAACGGGGTGGAACTCGA+AGG 0.584775 7.1:-69960122 None:intergenic
GAGCAAGAAGCAAGCCATAA+CGG 0.586092 7.1:+69960304 MS.gene73580:CDS
CCTGCATGAATGCAGGCCAT+TGG 0.587372 7.1:-69959979 None:intergenic
GTTTAACCGCCGTGTAGGCG+AGG 0.587763 7.1:+69960174 MS.gene73580:CDS
AGATCTTCAAGACTTCCATA+GGG 0.587939 7.1:-69959829 None:intergenic
GTGTTACTACTCTATTGAGC+TGG 0.588376 7.1:-69959643 None:intergenic
GGGAATACATGCTAGCAAGA+AGG 0.591113 7.1:+69959612 MS.gene73580:CDS
CTACTCTATTGAGCTGGTGT+AGG 0.595572 7.1:-69959637 None:intergenic
GAATTAAATACTCTATGAAG+TGG 0.597232 7.1:-69958670 None:intergenic
CAACGGGGTGGAACTCGAAG+GGG 0.601149 7.1:-69960120 None:intergenic
ATCACCAGATAGTTCAATGT+GGG 0.605621 7.1:+69958417 MS.gene73580:CDS
ATATCCTTCAGGGCTACCAA+TGG 0.606276 7.1:+69959963 MS.gene73580:CDS
AGGTTCCCGAGATGATTCCC+GGG 0.611238 7.1:-69960235 None:intergenic
AGAGGATAGAGAGACATGAG+AGG 0.611332 7.1:+69960488 MS.gene73580:CDS
AGGAAGATAATGGAAGGGAA+AGG 0.613642 7.1:+69960523 MS.gene73580:CDS
CATCGTGGCATGTGAAGGTG+AGG 0.614548 7.1:+69960465 MS.gene73580:CDS
CCCCGTTGGAGAACAACTTG+AGG 0.617458 7.1:+69960135 MS.gene73580:CDS
GCCCTACTCCGGTGATCCTG+AGG 0.621259 7.1:-69960033 None:intergenic
GGAGCAGTATATATTTGCAC+CGG 0.624565 7.1:+69960432 MS.gene73580:CDS
TCTAGCATGTGCTGAAGCAG+TGG 0.626696 7.1:+69959583 MS.gene73580:CDS
TTCCAGTGGAGTCAGCACCA+AGG 0.635729 7.1:+69960401 MS.gene73580:CDS
AATGGAGGAAGATAATGGAA+GGG 0.644464 7.1:+69960518 MS.gene73580:CDS
ATTTGACTTAGATGGTGATG+TGG 0.646549 7.1:+69958387 MS.gene73580:CDS
CGTTGCATGGAGTCACCTAG+TGG 0.646828 7.1:-69959665 None:intergenic
AATAGAGTAGTAACACCACT+AGG 0.648126 7.1:+69959650 MS.gene73580:CDS
GCCGTGCATCGAATCAGTCA+GGG 0.650203 7.1:+69960054 MS.gene73580:CDS
CACATGTTTAACCGCCGTGT+AGG 0.660169 7.1:+69960169 MS.gene73580:CDS
TATATGTAGGAGCAAGACAG+TGG 0.662868 7.1:+69959539 MS.gene73580:intron
GTCCAAGGAGTCGAAAATTG+CGG 0.666856 7.1:-69960371 None:intergenic
ACTCCGGTGATCCTGAGGAA+CGG 0.668022 7.1:-69960028 None:intergenic
CAAGTTGTTCTCCAACGGGG+TGG 0.668903 7.1:-69960132 None:intergenic
ACACGGCGGTTAAACATGTG+CGG 0.674730 7.1:-69960166 None:intergenic
GGTAGATAAACATGATGACG+AGG 0.677469 7.1:-69959795 None:intergenic
TGGCATGTGAAGGTGAGGAG+AGG 0.683443 7.1:+69960470 MS.gene73580:CDS
ACCAAACATAGTGACACTTG+TGG 0.687522 7.1:+69960282 MS.gene73580:CDS
TTATTGTAAGTAGAAGCTTG+TGG 0.706364 7.1:-69958520 None:intergenic
CCAATTTGTGATGCAAAACG+AGG 0.711917 7.1:-69958601 None:intergenic
TGATGGTTATAGGTTAACTG+AGG 0.712462 7.1:+69960615 MS.gene73580:CDS
GATGATTCCCGGGAACACGG+TGG 0.716326 7.1:-69960225 None:intergenic
AATCACCAGATAGTTCAATG+TGG 0.716750 7.1:+69958416 MS.gene73580:CDS
CCTCAAGTTGTTCTCCAACG+GGG 0.734185 7.1:-69960135 None:intergenic
ATTTGTGATGCAAAACGAGG+TGG 0.735195 7.1:-69958598 None:intergenic
ACCGGAGATTCGGAACATCG+TGG 0.740006 7.1:+69960450 MS.gene73580:CDS
CCAAAGCCTCGCCTACACGG+CGG 0.759718 7.1:-69960180 None:intergenic
GAGGATGACGATGATAACGA+TGG 0.794176 7.1:-69959776 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAGTATTAAATAATTAATA+CGG - chr7.1:69959423-69959442 None:intergenic 10.0%
!! ACTATATATCTAATATATGT+AGG + chr7.1:69959526-69959545 MS.gene73580:intron 15.0%
!! AGTAATAATAATCAACAAAA+AGG + chr7.1:69958634-69958653 MS.gene73580:CDS 15.0%
!! TATGTTAATTTATTCAGTTA+GGG - chr7.1:69959163-69959182 None:intergenic 15.0%
!! TTATGTTAATTTATTCAGTT+AGG - chr7.1:69959164-69959183 None:intergenic 15.0%
!!! TTAGTAAGATTGATAATAAA+TGG - chr7.1:69959202-69959221 None:intergenic 15.0%
!!! ATTTGTTTGATTTGAAGAAT+TGG - chr7.1:69958275-69958294 None:intergenic 20.0%
!!! TGTTGCATATATTGATTATT+TGG - chr7.1:69958697-69958716 None:intergenic 20.0%
!!! TTTGTTTGATTTGAAGAATT+GGG - chr7.1:69958274-69958293 None:intergenic 20.0%
! AATAATCAACAAAAAGGCAA+AGG + chr7.1:69958640-69958659 MS.gene73580:CDS 25.0%
! ACTCAATCAAGGATATTATT+GGG + chr7.1:69960580-69960599 MS.gene73580:CDS 25.0%
! AGTGATATGTATCATCAAAT+GGG + chr7.1:69958949-69958968 MS.gene73580:CDS 25.0%
! CTATCCAAAATTGTTGATAT+TGG - chr7.1:69958832-69958851 None:intergenic 25.0%
! GAATTAAATACTCTATGAAG+TGG - chr7.1:69958673-69958692 None:intergenic 25.0%
! GGTTATCATCCAAAATTAAA+AGG + chr7.1:69959359-69959378 MS.gene73580:intron 25.0%
! TCATGAAATCGTTATCTAAA+TGG - chr7.1:69958459-69958478 None:intergenic 25.0%
! TCCAAAATTAAAAGGATTAG+CGG + chr7.1:69959367-69959386 MS.gene73580:intron 25.0%
!! AACTCCAATATCAACAATTT+TGG + chr7.1:69958825-69958844 MS.gene73580:CDS 25.0%
!! TTAGGGTTAATGTTTCTAAT+GGG - chr7.1:69958490-69958509 None:intergenic 25.0%
ATCTATGGACGTTGTATTTA+TGG + chr7.1:69959332-69959351 MS.gene73580:intron 30.0%
ATTTGAGAGATGGTAAGTTT+AGG - chr7.1:69958369-69958388 None:intergenic 30.0%
CAAAATTCTTCAAGCTATTG+TGG + chr7.1:69958862-69958881 MS.gene73580:CDS 30.0%
GACTCAATCAAGGATATTAT+TGG + chr7.1:69960579-69960598 MS.gene73580:CDS 30.0%
GAGTGATATGTATCATCAAA+TGG + chr7.1:69958948-69958967 MS.gene73580:CDS 30.0%
TATAGGTTAACTGAGGATAA+AGG + chr7.1:69960622-69960641 MS.gene73580:CDS 30.0%
TCTAAGTCAAATTTGAGAGA+TGG - chr7.1:69958379-69958398 None:intergenic 30.0%
TGTAACTATAACTATGCTCA+AGG + chr7.1:69958544-69958563 MS.gene73580:CDS 30.0%
TGTATTCATGTGATGGTTAT+AGG + chr7.1:69960605-69960624 MS.gene73580:CDS 30.0%
TTATTGTAAGTAGAAGCTTG+TGG - chr7.1:69958523-69958542 None:intergenic 30.0%
! AAGTGTGCGAATTTTATGTA+AGG - chr7.1:69959878-69959897 None:intergenic 30.0%
! AGTGTGCGAATTTTATGTAA+GGG - chr7.1:69959877-69959896 None:intergenic 30.0%
! ATAAAGGTTGTTTGTTGCTT+GGG + chr7.1:69960638-69960657 MS.gene73580:CDS 30.0%
! GAAGAATCTACTATTTTGCA+TGG + chr7.1:69958895-69958914 MS.gene73580:CDS 30.0%
! GTTAGGGTTAATGTTTCTAA+TGG - chr7.1:69958491-69958510 None:intergenic 30.0%
! TCTCTCAAATTTGACTTAGA+TGG + chr7.1:69958379-69958398 MS.gene73580:CDS 30.0%
!! TGATCACTTTTCATCAACAA+AGG + chr7.1:69958777-69958796 MS.gene73580:CDS 30.0%
!! TTTTAGGTGAAGAAAGACAA+AGG - chr7.1:69959110-69959129 None:intergenic 30.0%
!!! TTCTTCTGAATGTTTTGACA+TGG + chr7.1:69958801-69958820 MS.gene73580:CDS 30.0%
AAAAATGCCACAAATTCGTG+TGG + chr7.1:69958307-69958326 MS.gene73580:CDS 35.0%
AATAGAGTAGTAACACCACT+AGG + chr7.1:69959650-69959669 MS.gene73580:CDS 35.0%
AATCACCAGATAGTTCAATG+TGG + chr7.1:69958416-69958435 MS.gene73580:CDS 35.0%
AATGCAAAGCCTCAAGAAAT+CGG - chr7.1:69960345-69960364 None:intergenic 35.0%
ACATTGAACTATCTGGTGAT+TGG - chr7.1:69958417-69958436 None:intergenic 35.0%
AGATCTTCAAGACTTCCATA+GGG - chr7.1:69959832-69959851 None:intergenic 35.0%
ATATATTTGCACCGGAGATT+CGG + chr7.1:69960440-69960459 MS.gene73580:CDS 35.0%
ATCACCAGATAGTTCAATGT+GGG + chr7.1:69958417-69958436 MS.gene73580:CDS 35.0%
ATGCAAATTCAAAGCCTATC+AGG + chr7.1:69958568-69958587 MS.gene73580:CDS 35.0%
ATTACCTGCTCAATTCCAAT+TGG - chr7.1:69959078-69959097 None:intergenic 35.0%
CACAAGCTTTACAACAAGAA+AGG + chr7.1:69958995-69959014 MS.gene73580:CDS 35.0%
CTAACAGTTCCTATTCCAAT+TGG + chr7.1:69959060-69959079 MS.gene73580:CDS 35.0%
GTATCATCAAATGGGATCTA+TGG + chr7.1:69958957-69958976 MS.gene73580:CDS 35.0%
TAAATCACCACACGAATTTG+TGG - chr7.1:69958317-69958336 None:intergenic 35.0%
TACAACGTCCATAGATATAG+AGG - chr7.1:69959328-69959347 None:intergenic 35.0%
TAGAAGCTTGTGGTGAATTA+GGG - chr7.1:69958513-69958532 None:intergenic 35.0%
TAGATCTTCAAGACTTCCAT+AGG - chr7.1:69959833-69959852 None:intergenic 35.0%
TATTCCAATTGGAATTGAGC+AGG + chr7.1:69959071-69959090 MS.gene73580:CDS 35.0%
TGATGGTTATAGGTTAACTG+AGG + chr7.1:69960615-69960634 MS.gene73580:CDS 35.0%
TGCTCAATTCCAATTGGAAT+AGG - chr7.1:69959072-69959091 None:intergenic 35.0%
TGTTGTGTCCTCTATATCTA+TGG + chr7.1:69959317-69959336 MS.gene73580:intron 35.0%
TTGGGTTTGTATTCATGTGA+TGG + chr7.1:69960598-69960617 MS.gene73580:CDS 35.0%
! ATGATCCTGTGAACTCTTTT+TGG - chr7.1:69959288-69959307 None:intergenic 35.0%
! ATTTGACTTAGATGGTGATG+TGG + chr7.1:69958387-69958406 MS.gene73580:CDS 35.0%
! ATTTTATGTAAGGGCAAGCT+TGG - chr7.1:69959868-69959887 None:intergenic 35.0%
! GAATCTACTATTTTGCATGG+TGG + chr7.1:69958898-69958917 MS.gene73580:CDS 35.0%
! GAGTTCTTGGAAGATTTTCA+AGG + chr7.1:69958748-69958767 MS.gene73580:CDS 35.0%
! GATAAAGGTTGTTTGTTGCT+TGG + chr7.1:69960637-69960656 MS.gene73580:CDS 35.0%
! GCATCTTTTGATGTTTCTCT+TGG - chr7.1:69959023-69959042 None:intergenic 35.0%
! GTCTAAAGTCATGATTGATG+TGG + chr7.1:69959233-69959252 MS.gene73580:intron 35.0%
!! AAATGGAGGAAGATAATGGA+AGG + chr7.1:69960517-69960536 MS.gene73580:CDS 35.0%
!! AATGGAGGAAGATAATGGAA+GGG + chr7.1:69960518-69960537 MS.gene73580:CDS 35.0%
!!! GCCGCTAATCCTTTTAATTT+TGG - chr7.1:69959371-69959390 None:intergenic 35.0%
AAGACTTCCATAGGGTTTGA+TGG - chr7.1:69959824-69959843 None:intergenic 40.0%
ACCAAACATAGTGACACTTG+TGG + chr7.1:69960282-69960301 MS.gene73580:CDS 40.0%
AGAAATCGGCCCAAAAAGTA+CGG - chr7.1:69960331-69960350 None:intergenic 40.0%
AGAATCTCTAAGTGCAAGAC+TGG + chr7.1:69959706-69959725 MS.gene73580:CDS 40.0%
AGACTTCCATAGGGTTTGAT+GGG - chr7.1:69959823-69959842 None:intergenic 40.0%
ATCGACCTTGATATCCTTCA+GGG + chr7.1:69959953-69959972 MS.gene73580:CDS 40.0%
ATTTGTGATGCAAAACGAGG+TGG - chr7.1:69958601-69958620 None:intergenic 40.0%
CCAATTTGTGATGCAAAACG+AGG - chr7.1:69958604-69958623 None:intergenic 40.0%
CTAATGCAGTGACTCAATCA+AGG + chr7.1:69960569-69960588 MS.gene73580:CDS 40.0%
CTTGATTGAGTCACTGCATT+AGG - chr7.1:69960571-69960590 None:intergenic 40.0%
CTTGTGGTGAATTAGGGTTA+GGG - chr7.1:69958507-69958526 None:intergenic 40.0%
GATGGTAAGTTTAGGCTTTG+TGG - chr7.1:69958361-69958380 None:intergenic 40.0%
GGACGTTGTATTTATGGCAA+TGG + chr7.1:69959338-69959357 MS.gene73580:intron 40.0%
GGAGAAATGGAGGAAGATAA+TGG + chr7.1:69960513-69960532 MS.gene73580:CDS 40.0%
GGAGCAGTATATATTTGCAC+CGG + chr7.1:69960432-69960451 MS.gene73580:CDS 40.0%
GGTCTCTTATCATGGACAAT+AGG - chr7.1:69960258-69960277 None:intergenic 40.0%
GTAGAAGCTTGTGGTGAATT+AGG - chr7.1:69958514-69958533 None:intergenic 40.0%
TATATGTAGGAGCAAGACAG+TGG + chr7.1:69959539-69959558 MS.gene73580:intron 40.0%
TCCAAGAACTCTTCAATAGC+TGG - chr7.1:69958739-69958758 None:intergenic 40.0%
TGCATCCAAAAAGAGTTCAC+AGG + chr7.1:69959280-69959299 MS.gene73580:intron 40.0%
! ATCCTCAAGTTGTTCTCCAA+CGG - chr7.1:69960140-69960159 None:intergenic 40.0%
! CCTCGTTTTGCATCACAAAT+TGG + chr7.1:69958601-69958620 MS.gene73580:CDS 40.0%
! GGTAGATAAACATGATGACG+AGG - chr7.1:69959798-69959817 None:intergenic 40.0%
! GTGTTACTACTCTATTGAGC+TGG - chr7.1:69959646-69959665 None:intergenic 40.0%
! TAACTCTGTTAAGCATCGTC+CGG - chr7.1:69960083-69960102 None:intergenic 40.0%
! TCCACAAGTGTCACTATGTT+TGG - chr7.1:69960286-69960305 None:intergenic 40.0%
!! AGGAAGATAATGGAAGGGAA+AGG + chr7.1:69960523-69960542 MS.gene73580:CDS 40.0%
!! GGAAGATAATGGAAGGGAAA+GGG + chr7.1:69960524-69960543 MS.gene73580:CDS 40.0%
!! TGACGATGACTTGGTTGTTA+GGG - chr7.1:69959738-69959757 None:intergenic 40.0%
!! TTGACGATGACTTGGTTGTT+AGG - chr7.1:69959739-69959758 None:intergenic 40.0%
!!! CATAACGGACCGTACTTTTT+GGG + chr7.1:69960319-69960338 MS.gene73580:CDS 40.0%
!!! CGATGGTGCTGTTAACTTTT+TGG - chr7.1:69959762-69959781 None:intergenic 40.0%
!!! CTTTTTGGTTGACGATGACT+TGG - chr7.1:69959747-69959766 None:intergenic 40.0%
ACATGAAGCTACTCGTTGCA+TGG - chr7.1:69959681-69959700 None:intergenic 45.0%
AGAGGATAGAGAGACATGAG+AGG + chr7.1:69960488-69960507 MS.gene73580:CDS 45.0%
ATATCCTTCAGGGCTACCAA+TGG + chr7.1:69959963-69959982 MS.gene73580:CDS 45.0%
ATCGAATCAGTCAGGGAAAC+CGG + chr7.1:69960061-69960080 MS.gene73580:CDS 45.0%
ATGAGAGGTTGGAGAAATGG+AGG + chr7.1:69960503-69960522 MS.gene73580:CDS 45.0%
ATGGAAGGGAAAGGGTTCAA+AGG + chr7.1:69960532-69960551 MS.gene73580:CDS 45.0%
CATCGACCTTGATATCCTTC+AGG + chr7.1:69959952-69959971 MS.gene73580:CDS 45.0%
CTACTCTATTGAGCTGGTGT+AGG - chr7.1:69959640-69959659 None:intergenic 45.0%
GACATGAGAGGTTGGAGAAA+TGG + chr7.1:69960500-69960519 MS.gene73580:CDS 45.0%
GAGCAAGAAGCAAGCCATAA+CGG + chr7.1:69960304-69960323 MS.gene73580:CDS 45.0%
GATAGAGAGACATGAGAGGT+TGG + chr7.1:69960492-69960511 MS.gene73580:CDS 45.0%
GCCAGCTATTGAAGAGTTCT+TGG + chr7.1:69958735-69958754 MS.gene73580:CDS 45.0%
GCTTCCCACATTGAACTATC+TGG - chr7.1:69958424-69958443 None:intergenic 45.0%
GCTTGTGGTGAATTAGGGTT+AGG - chr7.1:69958508-69958527 None:intergenic 45.0%
GGATATCAAGGTCGATGACA+TGG - chr7.1:69959949-69959968 None:intergenic 45.0%
GGGAATACATGCTAGCAAGA+AGG + chr7.1:69959612-69959631 MS.gene73580:CDS 45.0%
GTCACTGCATTAGGACTTAG+AGG - chr7.1:69960562-69960581 None:intergenic 45.0%
GTCCAAGGAGTCGAAAATTG+CGG - chr7.1:69960374-69960393 None:intergenic 45.0%
TACCTTCCCATCAAACCCTA+TGG + chr7.1:69959814-69959833 MS.gene73580:CDS 45.0%
TGGTGCTTGGTCTCTTATCA+TGG - chr7.1:69960266-69960285 None:intergenic 45.0%
TTCCATAGGGTTTGATGGGA+AGG - chr7.1:69959819-69959838 None:intergenic 45.0%
! AAGGTTGTTTGTTGCTTGGG+TGG + chr7.1:69960641-69960660 MS.gene73580:CDS 45.0%
! CCAAAAAGTACGGTCCGTTA+TGG - chr7.1:69960321-69960340 None:intergenic 45.0%
! GAGGATGACGATGATAACGA+TGG - chr7.1:69959779-69959798 None:intergenic 45.0%
! TCCTCAAGTTGTTCTCCAAC+GGG - chr7.1:69960139-69960158 None:intergenic 45.0%
!! CTCGAAAATGGCTTGGTTAG+CGG - chr7.1:69959903-69959922 None:intergenic 45.0%
!! CTTTTTGGGCCGATTTCTTG+AGG + chr7.1:69960333-69960352 MS.gene73580:CDS 45.0%
!! GTGTCACTATGTTTGGTGCT+TGG - chr7.1:69960279-69960298 None:intergenic 45.0%
!!! CCATAACGGACCGTACTTTT+TGG + chr7.1:69960318-69960337 MS.gene73580:CDS 45.0%
!!! TTTGAATTAATTAATATTTT+AGG - chr7.1:69959126-69959145 None:intergenic 5.0%
AACACGGTGGAGACGGTTAA+CGG - chr7.1:69960215-69960234 None:intergenic 50.0%
ACACGGCGGTTAAACATGTG+CGG - chr7.1:69960169-69960188 None:intergenic 50.0%
CAAACGCCTCGAAAATGGCT+TGG - chr7.1:69959910-69959929 None:intergenic 50.0%
CACATGTTTAACCGCCGTGT+AGG + chr7.1:69960169-69960188 MS.gene73580:CDS 50.0%
CCATGCAGAAGCAGCGATAA+TGG - chr7.1:69960677-69960696 None:intergenic 50.0%
CCATTATCGCTGCTTCTGCA+TGG + chr7.1:69960674-69960693 MS.gene73580:CDS 50.0%
GAGGTGGTGAACAACCTGAT+AGG - chr7.1:69958585-69958604 None:intergenic 50.0%
GGCAAGCTTGGTAGACGATT+TGG - chr7.1:69959856-69959875 None:intergenic 50.0%
GGTAGCCCTGAAGGATATCA+AGG - chr7.1:69959961-69959980 None:intergenic 50.0%
GTGCTGAAGCAGTGGCAAAA+GGG + chr7.1:69959591-69959610 MS.gene73580:CDS 50.0%
TAGGTTCCCGAGATGATTCC+CGG - chr7.1:69960239-69960258 None:intergenic 50.0%
TCTAGCATGTGCTGAAGCAG+TGG + chr7.1:69959583-69959602 MS.gene73580:CDS 50.0%
TGCCTCAAACGCCTCGAAAA+TGG - chr7.1:69959915-69959934 None:intergenic 50.0%
TGCTGAAGCAGTGGCAAAAG+GGG + chr7.1:69959592-69959611 MS.gene73580:CDS 50.0%
TGTGCTGAAGCAGTGGCAAA+AGG + chr7.1:69959590-69959609 MS.gene73580:CDS 50.0%
! CCTCAAGTTGTTCTCCAACG+GGG - chr7.1:69960138-69960157 None:intergenic 50.0%
! CTCCGCAATTTTCGACTCCT+TGG + chr7.1:69960369-69960388 MS.gene73580:CDS 50.0%
!! AGCCATTTTCGAGGCGTTTG+AGG + chr7.1:69959910-69959929 MS.gene73580:CDS 50.0%
!! CGCTAACCAAGCCATTTTCG+AGG + chr7.1:69959901-69959920 MS.gene73580:CDS 50.0%
!! TCCCTGACTGATTCGATGCA+CGG - chr7.1:69960058-69960077 None:intergenic 50.0%
!! TGCTGACTCCACTGGAAAAG+TGG - chr7.1:69960398-69960417 None:intergenic 50.0%
ACCGGAGATTCGGAACATCG+TGG + chr7.1:69960450-69960469 MS.gene73580:CDS 55.0%
ACTCCGGTGATCCTGAGGAA+CGG - chr7.1:69960031-69960050 None:intergenic 55.0%
AGGTTCCCGAGATGATTCCC+GGG - chr7.1:69960238-69960257 None:intergenic 55.0%
CAAGTTGTTCTCCAACGGGG+TGG - chr7.1:69960135-69960154 None:intergenic 55.0%
CACTGGAAAAGTGGCGTCCA+AGG - chr7.1:69960389-69960408 None:intergenic 55.0%
CATCGTGGCATGTGAAGGTG+AGG + chr7.1:69960465-69960484 MS.gene73580:CDS 55.0%
CCAATGGCCTGCATTCATGC+AGG + chr7.1:69959979-69959998 MS.gene73580:CDS 55.0%
CCCCGTTGGAGAACAACTTG+AGG + chr7.1:69960135-69960154 MS.gene73580:CDS 55.0%
CCTGCATGAATGCAGGCCAT+TGG - chr7.1:69959982-69960001 None:intergenic 55.0%
CGAGATGATTCCCGGGAACA+CGG - chr7.1:69960231-69960250 None:intergenic 55.0%
CGGAACATCGTGGCATGTGA+AGG + chr7.1:69960460-69960479 MS.gene73580:CDS 55.0%
CGTGTTCCCGGGAATCATCT+CGG + chr7.1:69960229-69960248 MS.gene73580:CDS 55.0%
CGTTGCATGGAGTCACCTAG+TGG - chr7.1:69959668-69959687 None:intergenic 55.0%
GCCAATGCCTGCATGAATGC+AGG - chr7.1:69959989-69960008 None:intergenic 55.0%
GCCACGATGTTCCGAATCTC+CGG - chr7.1:69960454-69960473 None:intergenic 55.0%
GCCGTGCATCGAATCAGTCA+GGG + chr7.1:69960054-69960073 MS.gene73580:CDS 55.0%
GCCTGCATTCATGCAGGCAT+TGG + chr7.1:69959985-69960004 MS.gene73580:CDS 55.0%
GTGTTCCCGGGAATCATCTC+GGG + chr7.1:69960230-69960249 MS.gene73580:CDS 55.0%
TACTGCTCCACCTTAGCCCT+TGG - chr7.1:69960421-69960440 None:intergenic 55.0%
TCCAGTGGAGTCAGCACCAA+GGG + chr7.1:69960402-69960421 MS.gene73580:CDS 55.0%
TCCTCAGGATCACCGGAGTA+GGG + chr7.1:69960032-69960051 MS.gene73580:CDS 55.0%
TGGCATGTGAAGGTGAGGAG+AGG + chr7.1:69960470-69960489 MS.gene73580:CDS 55.0%
TTCCAGTGGAGTCAGCACCA+AGG + chr7.1:69960401-69960420 MS.gene73580:CDS 55.0%
TTCCTCAGGATCACCGGAGT+AGG + chr7.1:69960031-69960050 MS.gene73580:CDS 55.0%
!! TCATGCAGGCATTGGCTGCA+CGG + chr7.1:69959993-69960012 MS.gene73580:CDS 55.0%
!!! CTTGGACGCCACTTTTCCAG+TGG + chr7.1:69960387-69960406 MS.gene73580:CDS 55.0%
AACCGTCTCCACCGTGTTCC+CGG + chr7.1:69960217-69960236 MS.gene73580:CDS 60.0%
CAACGGGGTGGAACTCGAAG+GGG - chr7.1:69960123-69960142 None:intergenic 60.0%
CCAACGGGGTGGAACTCGAA+GGG - chr7.1:69960124-69960143 None:intergenic 60.0%
GATGATTCCCGGGAACACGG+TGG - chr7.1:69960228-69960247 None:intergenic 60.0%
GCTCCGTTCCTCAGGATCAC+CGG + chr7.1:69960025-69960044 MS.gene73580:CDS 60.0%
GGAGTCAGCACCAAGGGCTA+AGG + chr7.1:69960408-69960427 MS.gene73580:CDS 60.0%
GGCCGTGCATCGAATCAGTC+AGG + chr7.1:69960053-69960072 MS.gene73580:CDS 60.0%
GTCAGCACCAAGGGCTAAGG+TGG + chr7.1:69960411-69960430 MS.gene73580:CDS 60.0%
GTTTAACCGCCGTGTAGGCG+AGG + chr7.1:69960174-69960193 MS.gene73580:CDS 60.0%
TCCAACGGGGTGGAACTCGA+AGG - chr7.1:69960125-69960144 None:intergenic 60.0%
TTCGATGCACGGCCCTACTC+CGG - chr7.1:69960047-69960066 None:intergenic 60.0%
! CAGGCCATTGGTAGCCCTGA+AGG - chr7.1:69959970-69959989 None:intergenic 60.0%
ACCGTCTCCACCGTGTTCCC+GGG + chr7.1:69960218-69960237 MS.gene73580:CDS 65.0%
CCAAAGCCTCGCCTACACGG+CGG - chr7.1:69960183-69960202 None:intergenic 65.0%
CCGCCAAAGCCTCGCCTACA+CGG - chr7.1:69960186-69960205 None:intergenic 65.0%
GCCCTACTCCGGTGATCCTG+AGG - chr7.1:69960036-69960055 None:intergenic 65.0%
TCCCGGGAACACGGTGGAGA+CGG - chr7.1:69960222-69960241 None:intergenic 65.0%
! CCCTTCGAGTTCCACCCCGT+TGG + chr7.1:69960121-69960140 MS.gene73580:CDS 65.0%
! CCGTGTAGGCGAGGCTTTGG+CGG + chr7.1:69960183-69960202 MS.gene73580:CDS 65.0%
!! GCCCTTGGTGCTGACTCCAC+TGG - chr7.1:69960406-69960425 None:intergenic 65.0%
CCGCCGTGTAGGCGAGGCTT+TGG + chr7.1:69960180-69960199 MS.gene73580:CDS 70.0%
!! CAGGCATTGGCTGCACGGCC+CGG + chr7.1:69959998-69960017 MS.gene73580:CDS 70.0%
!! CCTGAGGAACGGAGCACCGC+CGG - chr7.1:69960020-69960039 None:intergenic 70.0%
!! CTGAGGAACGGAGCACCGCC+GGG - chr7.1:69960019-69960038 None:intergenic 70.0%
CCGGCGGTGCTCCGTTCCTC+AGG + chr7.1:69960017-69960036 MS.gene73580:CDS 75.0%
!! GCATTGGCTGCACGGCCCGG+CGG + chr7.1:69960001-69960020 MS.gene73580:CDS 75.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 69958217 69960705 69958217 ID=MS.gene73580
chr7.1 mRNA 69958217 69960705 69958217 ID=MS.gene73580.t1;Parent=MS.gene73580
chr7.1 exon 69958217 69959092 69958217 ID=MS.gene73580.t1.exon1;Parent=MS.gene73580.t1
chr7.1 CDS 69958217 69959092 69958217 ID=cds.MS.gene73580.t1;Parent=MS.gene73580.t1
chr7.1 exon 69959548 69960705 69959548 ID=MS.gene73580.t1.exon2;Parent=MS.gene73580.t1
chr7.1 CDS 69959548 69960705 69959548 ID=cds.MS.gene73580.t1;Parent=MS.gene73580.t1
Gene Sequence

>MS.gene73580

ATGATGAATTCACTTTGTGGAAGCTCAAATTCTCTCAAAGAAAAATGTCTTCAACCCAATTCTTCAAATCAAACAAATACACACTCAAAGAAAAATGCCACAAATTCGTGTGGTGATTTAGAGCAAATTAATGTTCTAACTCCACAAAGCCTAAACTTACCATCTCTCAAATTTGACTTAGATGGTGATGTGGAAGTCCAATCACCAGATAGTTCAATGTGGGAAGCATTTTTCAATGACCATTTAGATAACGATTTCATGATATCATCACCCATTAGAAACATTAACCCTAACCCTAATTCACCACAAGCTTCTACTTACAATAATTGTAACTATAACTATGCTCAAGGCATGCAAATTCAAAGCCTATCAGGTTGTTCACCACCTCGTTTTGCATCACAAATTGGTTCATTAAATAGTAATAATAATCAACAAAAAGGCAAAGGACTTAGTCCACTTCATAGAGTATTTAATTCACCAAATAATCAATATATGCAACATGTTGAGAATCTTTCATTGCCAGCTATTGAAGAGTTCTTGGAAGATTTTCAAGGTGATGTTGATCACTTTTCATCAACAAAGGTTTCTTCTGAATGTTTTGACATGGAAACTCCAATATCAACAATTTTGGATAGTTTAACAATGCAAAATTCTTCAAGCTATTGTGGTTCAGTTAATGAAGAATCTACTATTTTGCATGGTGGTAATTCTTCTTCTCAACTTTCTCAAGAGAGTGATATGTATCATCAAATGGGATCTATGGCTAGTGCTTCTCTTTCACAAGCTTTACAACAAGAAAGGTACCAAGAGAAACATCAAAAGATGCAAGCTCAACAACAGAGTCTAACAGTTCCTATTCCAATTGGAATTGAGCAGGTAATAAAATCTTTCCTTTGTCTTTCTTCACCTAAAATATTAATTAATTCAAATTTGAAGTTTTTTTCCCTAACTGAATAAATTAACATAATCAATAGACAATCTACCATTTATTATCAATCTTACTAATTCACTTGAGTGTCTAAAGTCATGATTGATGTGGCAATGAAAACTATATTATAAGATGTGCATCCAAAAAGAGTTCACAGGATCATGCATAACAATGTTGTGTCCTCTATATCTATGGACGTTGTATTTATGGCAATGGTTATCATCCAAAATTAAAAGGATTAGCGGCACAGCTTATTGTCTGCTTTACTTCTATTTCCGTATTAATTATTTAATACTTGATGTACATCTGAATGATCATGATCTAGAAAAATATATTTCAAGCAATTTACAAGATTTATTTTTATGATTTCTAATCTTAAAAACTATATATCTAATATATGTAGGAGCAAGACAGTGGACTTCAACTAGTGCACTTGCTTCTAGCATGTGCTGAAGCAGTGGCAAAAGGGGAATACATGCTAGCAAGAAGGTACCTACACCAGCTCAATAGAGTAGTAACACCACTAGGTGACTCCATGCAACGAGTAGCTTCATGTTTCACAGAATCTCTAAGTGCAAGACTGGCTGCAACCCTAACAACCAAGTCATCGTCAACCAAAAAGTTAACAGCACCATCGTTATCATCGTCATCCTCGTCATCATGTTTATCTACCTTCCCATCAAACCCTATGGAAGTCTTGAAGATCTACCAAATCGTCTACCAAGCTTGCCCTTACATAAAATTCGCACACTTTACCGCTAACCAAGCCATTTTCGAGGCGTTTGAGGCAGAAGAGCGTGTCCATGTCATCGACCTTGATATCCTTCAGGGCTACCAATGGCCTGCATTCATGCAGGCATTGGCTGCACGGCCCGGCGGTGCTCCGTTCCTCAGGATCACCGGAGTAGGGCCGTGCATCGAATCAGTCAGGGAAACCGGACGATGCTTAACAGAGTTAGCTCATTCTCTTCGTATCCCCTTCGAGTTCCACCCCGTTGGAGAACAACTTGAGGATCTTAAACCGCACATGTTTAACCGCCGTGTAGGCGAGGCTTTGGCGGTTAACACCGTTAACCGTCTCCACCGTGTTCCCGGGAATCATCTCGGGAACCTATTGTCCATGATAAGAGACCAAGCACCAAACATAGTGACACTTGTGGAGCAAGAAGCAAGCCATAACGGACCGTACTTTTTGGGCCGATTTCTTGAGGCTTTGCATTACTACTCCGCAATTTTCGACTCCTTGGACGCCACTTTTCCAGTGGAGTCAGCACCAAGGGCTAAGGTGGAGCAGTATATATTTGCACCGGAGATTCGGAACATCGTGGCATGTGAAGGTGAGGAGAGGATAGAGAGACATGAGAGGTTGGAGAAATGGAGGAAGATAATGGAAGGGAAAGGGTTCAAAGGAGTGCCTCTAAGTCCTAATGCAGTGACTCAATCAAGGATATTATTGGGTTTGTATTCATGTGATGGTTATAGGTTAACTGAGGATAAAGGTTGTTTGTTGCTTGGGTGGCAAGACAGAGCCATTATCGCTGCTTCTGCATGGCGATGCTGA
Protein sequence

>MS.gene73580.t1

MMNSLCGSSNSLKEKCLQPNSSNQTNTHSKKNATNSCGDLEQINVLTPQSLNLPSLKFDLDGDVEVQSPDSSMWEAFFNDHLDNDFMISSPIRNINPNPNSPQASTYNNCNYNYAQGMQIQSLSGCSPPRFASQIGSLNSNNNQQKGKGLSPLHRVFNSPNNQYMQHVENLSLPAIEEFLEDFQGDVDHFSSTKVSSECFDMETPISTILDSLTMQNSSSYCGSVNEESTILHGGNSSSQLSQESDMYHQMGSMASASLSQALQQERYQEKHQKMQAQQQSLTVPIPIGIEQEQDSGLQLVHLLLACAEAVAKGEYMLARRYLHQLNRVVTPLGDSMQRVASCFTESLSARLAATLTTKSSSTKKLTAPSLSSSSSSSCLSTFPSNPMEVLKIYQIVYQACPYIKFAHFTANQAIFEAFEAEERVHVIDLDILQGYQWPAFMQALAARPGGAPFLRITGVGPCIESVRETGRCLTELAHSLRIPFEFHPVGEQLEDLKPHMFNRRVGEALAVNTVNRLHRVPGNHLGNLLSMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPVESAPRAKVEQYIFAPEIRNIVACEGEERIERHERLEKWRKIMEGKGFKGVPLSPNAVTQSRILLGLYSCDGYRLTEDKGCLLLGWQDRAIIAASAWRC