Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73603.t1 | RHN44868.1 | 83.9 | 1175 | 126 | 9 | 1 | 1142 | 1 | 1145 | 0.00E+00 | 1878.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73603.t1 | Q9M297 | 44.0 | 1218 | 540 | 27 | 14 | 1112 | 59 | 1253 | 1.6e-261 | 904.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73603.t1 | G7L120 | 83.9 | 1175 | 126 | 9 | 1 | 1142 | 37 | 1181 | 0.0e+00 | 1878.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene73603.t1 | TR | SNF2 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73603.t1 | MTR_7g026650 | 85.702 | 1175 | 105 | 9 | 1 | 1142 | 37 | 1181 | 0.0 | 2027 |
MS.gene73603.t1 | MTR_3g071860 | 70.213 | 1222 | 253 | 16 | 1 | 1113 | 47 | 1266 | 0.0 | 1638 |
MS.gene73603.t1 | MTR_1g081750 | 63.379 | 882 | 268 | 12 | 272 | 1114 | 251 | 1116 | 0.0 | 1069 |
MS.gene73603.t1 | MTR_1g081750 | 57.212 | 208 | 78 | 4 | 1 | 202 | 47 | 249 | 7.03e-61 | 228 |
MS.gene73603.t1 | MTR_5g083300 | 57.907 | 860 | 300 | 17 | 305 | 1112 | 453 | 1302 | 0.0 | 943 |
MS.gene73603.t1 | MTR_5g083300 | 44.643 | 280 | 128 | 6 | 12 | 276 | 58 | 325 | 3.00e-56 | 214 |
MS.gene73603.t1 | MTR_5g083300 | 57.907 | 860 | 300 | 17 | 305 | 1112 | 490 | 1339 | 0.0 | 942 |
MS.gene73603.t1 | MTR_5g083300 | 44.643 | 280 | 128 | 6 | 12 | 276 | 95 | 362 | 3.47e-56 | 214 |
MS.gene73603.t1 | MTR_7g026620 | 59.847 | 782 | 148 | 17 | 255 | 1030 | 4 | 625 | 0.0 | 806 |
MS.gene73603.t1 | MTR_7g026550 | 44.595 | 592 | 95 | 12 | 436 | 1025 | 6 | 366 | 2.77e-125 | 389 |
MS.gene73603.t1 | MTR_7g450860 | 29.506 | 749 | 418 | 20 | 414 | 1100 | 557 | 1257 | 1.25e-82 | 295 |
MS.gene73603.t1 | MTR_7g450820 | 31.806 | 720 | 388 | 23 | 435 | 1094 | 537 | 1213 | 4.56e-82 | 293 |
MS.gene73603.t1 | MTR_7g029525 | 29.694 | 751 | 443 | 19 | 414 | 1113 | 608 | 1324 | 3.61e-81 | 291 |
MS.gene73603.t1 | MTR_7g450790 | 29.660 | 735 | 424 | 19 | 434 | 1113 | 743 | 1439 | 2.20e-79 | 286 |
MS.gene73603.t1 | MTR_7g050445 | 29.698 | 761 | 431 | 23 | 414 | 1113 | 581 | 1298 | 1.84e-78 | 283 |
MS.gene73603.t1 | MTR_7g450780 | 29.313 | 771 | 433 | 23 | 414 | 1113 | 617 | 1346 | 1.65e-76 | 277 |
MS.gene73603.t1 | MTR_4g088650 | 28.944 | 729 | 410 | 17 | 435 | 1113 | 548 | 1218 | 1.93e-71 | 261 |
MS.gene73603.t1 | MTR_2g437480 | 27.954 | 694 | 381 | 24 | 416 | 1069 | 387 | 1001 | 1.05e-63 | 236 |
MS.gene73603.t1 | MTR_8g037345 | 27.388 | 712 | 405 | 22 | 395 | 1069 | 216 | 852 | 3.20e-62 | 230 |
MS.gene73603.t1 | MTR_3g071660 | 62.069 | 116 | 27 | 1 | 725 | 840 | 1 | 99 | 7.65e-35 | 129 |
MS.gene73603.t1 | MTR_7g026610 | 80.282 | 71 | 14 | 0 | 149 | 219 | 13 | 83 | 1.65e-32 | 121 |
MS.gene73603.t1 | MTR_7g026590 | 65.979 | 97 | 24 | 3 | 354 | 445 | 7 | 99 | 1.10e-27 | 108 |
MS.gene73603.t1 | MTR_1g080420 | 24.059 | 611 | 336 | 25 | 556 | 1074 | 576 | 1150 | 1.60e-24 | 112 |
MS.gene73603.t1 | MTR_3g084600 | 67.123 | 73 | 23 | 1 | 523 | 595 | 33 | 104 | 1.81e-24 | 102 |
MS.gene73603.t1 | MTR_1g080420 | 24.059 | 611 | 336 | 25 | 556 | 1074 | 707 | 1281 | 1.98e-24 | 111 |
MS.gene73603.t1 | MTR_7g026600 | 72.131 | 61 | 17 | 0 | 210 | 270 | 4 | 64 | 2.38e-23 | 94.7 |
MS.gene73603.t1 | MTR_3g071670 | 51.485 | 101 | 12 | 3 | 809 | 909 | 2 | 65 | 7.76e-20 | 85.1 |
MS.gene73603.t1 | MTR_4g032945 | 68.627 | 51 | 16 | 0 | 52 | 102 | 3 | 53 | 1.85e-16 | 75.5 |
MS.gene73603.t1 | MTR_5g004720 | 21.662 | 674 | 355 | 30 | 525 | 1121 | 163 | 740 | 8.55e-14 | 76.6 |
MS.gene73603.t1 | MTR_5g020000 | 23.077 | 585 | 326 | 22 | 597 | 1134 | 206 | 713 | 1.15e-11 | 69.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73603.t1 | AT3G42670 | 54.777 | 785 | 298 | 15 | 374 | 1112 | 480 | 1253 | 0.0 | 823 |
MS.gene73603.t1 | AT3G42670 | 38.372 | 258 | 145 | 5 | 14 | 270 | 59 | 303 | 8.90e-43 | 171 |
MS.gene73603.t1 | AT3G42670 | 54.777 | 785 | 298 | 15 | 374 | 1112 | 480 | 1253 | 0.0 | 823 |
MS.gene73603.t1 | AT3G42670 | 38.372 | 258 | 145 | 5 | 14 | 270 | 59 | 303 | 8.90e-43 | 171 |
MS.gene73603.t1 | AT3G42670 | 54.777 | 785 | 298 | 15 | 374 | 1112 | 480 | 1253 | 0.0 | 823 |
MS.gene73603.t1 | AT3G42670 | 38.372 | 258 | 145 | 5 | 14 | 270 | 59 | 303 | 8.90e-43 | 171 |
MS.gene73603.t1 | AT3G42670 | 54.638 | 787 | 298 | 15 | 374 | 1112 | 480 | 1255 | 0.0 | 823 |
MS.gene73603.t1 | AT3G42670 | 38.372 | 258 | 145 | 5 | 14 | 270 | 59 | 303 | 9.08e-43 | 171 |
MS.gene73603.t1 | AT5G20420 | 55.045 | 783 | 298 | 14 | 375 | 1112 | 486 | 1259 | 0.0 | 820 |
MS.gene73603.t1 | AT5G20420 | 36.630 | 273 | 136 | 8 | 14 | 271 | 59 | 309 | 1.32e-37 | 154 |
MS.gene73603.t1 | AT3G24340 | 29.396 | 728 | 409 | 19 | 419 | 1102 | 448 | 1114 | 9.89e-80 | 285 |
MS.gene73603.t1 | AT1G05490 | 28.830 | 718 | 405 | 22 | 468 | 1126 | 735 | 1405 | 1.20e-77 | 281 |
MS.gene73603.t1 | AT2G16390 | 29.599 | 598 | 328 | 21 | 422 | 1001 | 226 | 748 | 3.42e-60 | 223 |
MS.gene73603.t1 | AT2G16390 | 29.599 | 598 | 328 | 21 | 422 | 1001 | 229 | 751 | 3.69e-60 | 223 |
MS.gene73603.t1 | AT2G21450 | 27.497 | 731 | 409 | 25 | 389 | 1069 | 23 | 682 | 1.54e-59 | 219 |
MS.gene73603.t1 | AT2G21450 | 27.497 | 731 | 409 | 25 | 389 | 1069 | 121 | 780 | 3.51e-59 | 219 |
MS.gene73603.t1 | AT2G21450 | 27.497 | 731 | 409 | 25 | 389 | 1069 | 114 | 773 | 3.60e-59 | 219 |
MS.gene73603.t1 | AT1G08600 | 28.807 | 243 | 132 | 8 | 558 | 790 | 715 | 926 | 5.69e-22 | 103 |
MS.gene73603.t1 | AT1G08600 | 28.807 | 243 | 132 | 8 | 558 | 790 | 715 | 926 | 5.69e-22 | 103 |
MS.gene73603.t1 | AT1G08600 | 28.807 | 243 | 132 | 8 | 558 | 790 | 715 | 926 | 5.69e-22 | 103 |
Find 188 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGTTAATTGGTGGCAGAAAA+TGG | 0.169765 | 7.1:+70294307 | MS.gene73603:CDS |
TGACACTTACATGAAGAATT+TGG | 0.169887 | 7.1:+70294338 | MS.gene73603:CDS |
GCTCAGAACAAATCTTATTT+TGG | 0.176054 | 7.1:-70296450 | None:intergenic |
AGCACTTCGTGAACAAATTT+TGG | 0.230747 | 7.1:-70295966 | None:intergenic |
CTGAAGTGGTTAAGCCTTAT+AGG | 0.238613 | 7.1:+70293554 | MS.gene73603:CDS |
TATACGTTCAATGAAGAAAT+TGG | 0.253715 | 7.1:+70294812 | MS.gene73603:CDS |
AGGGCTTTCTCTCAAAGTTT+TGG | 0.255357 | 7.1:-70295784 | None:intergenic |
GAATGAAACCTTCTTTAAAA+AGG | 0.258801 | 7.1:-70293668 | None:intergenic |
CCTGGAGTTCCAAGACCTTC+TGG | 0.279541 | 7.1:+70295621 | MS.gene73603:CDS |
AATTCATGGTTCGGATGATA+TGG | 0.288963 | 7.1:+70294176 | MS.gene73603:CDS |
CCATGAATTCGCCTCCTTGC+AGG | 0.300379 | 7.1:-70294162 | None:intergenic |
AAGATTAAACTTACTGGAAT+AGG | 0.303498 | 7.1:-70293189 | None:intergenic |
GTCCAACCCGATTTGACATT+TGG | 0.313761 | 7.1:-70293167 | None:intergenic |
GAATTGAGGATATTACTTTC+TGG | 0.314867 | 7.1:+70295888 | MS.gene73603:CDS |
AGGCCTTCAATTAGATTTGA+TGG | 0.316869 | 7.1:-70293874 | None:intergenic |
TGATGACTTGTCTGCCATTT+GGG | 0.322544 | 7.1:+70294470 | MS.gene73603:CDS |
CCAGGAAGAACCGTAGGTTT+TGG | 0.328085 | 7.1:-70295603 | None:intergenic |
TGGTGATGTAAAACATGTTT+TGG | 0.329183 | 7.1:+70295641 | MS.gene73603:CDS |
ACAGAAACTGCAGAAGAAAA+TGG | 0.339883 | 7.1:+70296265 | MS.gene73603:CDS |
AAATACTTTCAATGGCAAAA+TGG | 0.340921 | 7.1:+70296560 | MS.gene73603:CDS |
ACTTTGTTTCAGAACAATTT+CGG | 0.346807 | 7.1:+70295912 | MS.gene73603:CDS |
CTGATGACTTGTCTGCCATT+TGG | 0.349617 | 7.1:+70294469 | MS.gene73603:CDS |
CTCTACCTCGAGAGGGTAAC+TGG | 0.351257 | 7.1:-70296300 | None:intergenic |
CCAAAACCTACGGTTCTTCC+TGG | 0.354433 | 7.1:+70295603 | MS.gene73603:CDS |
CAGCTTCGTGAGGTTGTCTC+TGG | 0.354705 | 7.1:-70293360 | None:intergenic |
ATCAAATTTGATTTAAGAAA+AGG | 0.357435 | 7.1:+70296425 | MS.gene73603:CDS |
TTGTGGAAGATCCTTCTAAA+TGG | 0.362063 | 7.1:+70296902 | MS.gene73603:CDS |
TCAGATGAATCCCACCTATA+AGG | 0.365181 | 7.1:-70293568 | None:intergenic |
GAAGGTGGCAGAACGTTAAT+TGG | 0.371184 | 7.1:+70294294 | MS.gene73603:CDS |
GTTGATGATAATGTTACTTT+GGG | 0.371974 | 7.1:+70294111 | MS.gene73603:CDS |
AGAAGAACCTATGTAACGTT+TGG | 0.381332 | 7.1:-70293926 | None:intergenic |
AATTCCTCTGATACACTTCC+TGG | 0.382519 | 7.1:+70296188 | MS.gene73603:CDS |
CTATGCTCCAAATGTCAAAT+CGG | 0.384080 | 7.1:+70293160 | MS.gene73603:CDS |
TATTTGTCAAACAAATTGAT+TGG | 0.385123 | 7.1:-70294257 | None:intergenic |
GCAGCAAGTTGTCTTCTTGA+TGG | 0.386624 | 7.1:+70294513 | MS.gene73603:CDS |
CTTTCTAGAAGGATCAGATT+TGG | 0.387322 | 7.1:+70297059 | MS.gene73603:CDS |
AGTTGATGATAATGTTACTT+TGG | 0.388501 | 7.1:+70294110 | MS.gene73603:CDS |
TCATCAAGTATCAAGATTCC+AGG | 0.388586 | 7.1:-70295804 | None:intergenic |
AAGGTTGAGGAAATGCTTAA+TGG | 0.392142 | 7.1:+70295854 | MS.gene73603:CDS |
GTCTGCCATTTGGGAAGAAA+TGG | 0.392168 | 7.1:+70294479 | MS.gene73603:CDS |
GTTTCTTCATCGTTAATAGT+TGG | 0.393101 | 7.1:-70294384 | None:intergenic |
GAAACGAATTCCTTCCCATT+TGG | 0.396094 | 7.1:-70294208 | None:intergenic |
GCAGCATTTGCTTGAGGCGC+GGG | 0.398158 | 7.1:+70296040 | MS.gene73603:CDS |
TTCATCGACGTTTATGAAAG+TGG | 0.402935 | 7.1:+70296164 | MS.gene73603:CDS |
TATTTGAGAAATACTTTCAA+TGG | 0.406014 | 7.1:+70296552 | MS.gene73603:CDS |
CCTGCAAGGAGGCGAATTCA+TGG | 0.412723 | 7.1:+70294162 | MS.gene73603:CDS |
TTCACAACATTTATAAAAGA+AGG | 0.416690 | 7.1:-70293757 | None:intergenic |
CATGTGTAGAGTGTGGATTT+TGG | 0.417397 | 7.1:-70295498 | None:intergenic |
AGTTACTTGAAGTTATTTCC+AGG | 0.421538 | 7.1:+70295453 | MS.gene73603:CDS |
ATCACAGTCAAGATTAGTCT+TGG | 0.426980 | 7.1:+70293606 | MS.gene73603:CDS |
TCACAGTCAAGATTAGTCTT+GGG | 0.431530 | 7.1:+70293607 | MS.gene73603:CDS |
ATGCCATCAAATCTAATTGA+AGG | 0.433924 | 7.1:+70293871 | MS.gene73603:CDS |
GGATGGTAAGAGTGGTGAAA+AGG | 0.434748 | 7.1:+70293999 | MS.gene73603:CDS |
GATCTAGATTTGTTTGAAAG+AGG | 0.437409 | 7.1:+70296608 | MS.gene73603:CDS |
GAAGAACCTATGTAACGTTT+GGG | 0.437927 | 7.1:-70293925 | None:intergenic |
AAAGAGGTTCTGCTACTAAC+TGG | 0.439777 | 7.1:+70296584 | MS.gene73603:CDS |
TGTGAACTTCAAATCGGAAA+AGG | 0.444435 | 7.1:+70293774 | MS.gene73603:CDS |
TCAATTAGATTTGATGGCAT+TGG | 0.444635 | 7.1:-70293868 | None:intergenic |
CTCTCTGTGTTCGACGGCCA+TGG | 0.448149 | 7.1:-70295569 | None:intergenic |
TCTGCCGATATTGGTTCATC+CGG | 0.449120 | 7.1:-70295225 | None:intergenic |
AGGTTCTTCTGTTGAGAAGT+TGG | 0.452731 | 7.1:+70293939 | MS.gene73603:CDS |
GTAAATTTCTACGAGGATCA+AGG | 0.454603 | 7.1:+70293406 | MS.gene73603:CDS |
TTGCATGAGGGATGGTTCCA+TGG | 0.456415 | 7.1:-70295346 | None:intergenic |
AAATGTTGTGAACTTCAAAT+CGG | 0.456729 | 7.1:+70293768 | MS.gene73603:CDS |
TAGCCTCTTCAATTCATCTT+CGG | 0.456753 | 7.1:-70296396 | None:intergenic |
ATATCACATGCTCCTGGAGC+TGG | 0.460717 | 7.1:+70295399 | MS.gene73603:CDS |
TTTCGAATCTTTCTTGCATG+AGG | 0.466500 | 7.1:-70295359 | None:intergenic |
TGCGAATATCAGATGACAAA+GGG | 0.468200 | 7.1:-70293074 | None:intergenic |
TATGATTATGAAGAATGAAA+AGG | 0.468297 | 7.1:+70296993 | MS.gene73603:CDS |
CTCAACTCATGCTACTGATC+CGG | 0.469383 | 7.1:+70295206 | MS.gene73603:CDS |
TGATCCGGATGAACCAATAT+CGG | 0.470428 | 7.1:+70295221 | MS.gene73603:CDS |
GGACAGCAAGGCTTTCTAGA+AGG | 0.470729 | 7.1:+70297048 | MS.gene73603:CDS |
CGCAGCATTTGCTTGAGGCG+CGG | 0.471984 | 7.1:+70296039 | MS.gene73603:CDS |
AGTAATATCCTCAATTCTGT+TGG | 0.474003 | 7.1:-70295882 | None:intergenic |
TTACCATCCTCTATCTTGTA+TGG | 0.475647 | 7.1:-70293985 | None:intergenic |
AGATTGAAGATGAAATACTT+AGG | 0.478427 | 7.1:+70296935 | MS.gene73603:CDS |
AAGAAGAATGGTGCTGCTGC+TGG | 0.481843 | 7.1:+70294063 | MS.gene73603:CDS |
AATAAAGAGGTTTATGCGAC+TGG | 0.484157 | 7.1:+70293457 | MS.gene73603:CDS |
GTGTATCAGTTATTGACGAC+CGG | 0.485069 | 7.1:+70296805 | MS.gene73603:CDS |
GTTAATTGGTGGCAGAAAAT+GGG | 0.485501 | 7.1:+70294308 | MS.gene73603:CDS |
AGTATCCATTTCTTCCCAAA+TGG | 0.486016 | 7.1:-70294484 | None:intergenic |
AAATATCTTTCAAAGAAGAA+TGG | 0.486991 | 7.1:+70294051 | MS.gene73603:CDS |
TCAATGGCAAAATGGAAAAG+AGG | 0.487364 | 7.1:+70296568 | MS.gene73603:CDS |
GATTGAAGATGAAATACTTA+GGG | 0.488087 | 7.1:+70296936 | MS.gene73603:CDS |
ATTTGCTTGAGGCGCGGGCG+AGG | 0.490931 | 7.1:+70296045 | MS.gene73603:CDS |
TGGAACTTCCAACAGAATTG+AGG | 0.492225 | 7.1:+70295874 | MS.gene73603:CDS |
TTTACATCACCAGAAGGTCT+TGG | 0.492630 | 7.1:-70295630 | None:intergenic |
ATAGTTGGCTCTTCTTCGAC+TGG | 0.493267 | 7.1:-70294369 | None:intergenic |
GAGAAAAGAAATGACGAGAA+AGG | 0.494020 | 7.1:-70295427 | None:intergenic |
ATTTGCACACAGAAATTACA+TGG | 0.498629 | 7.1:+70295761 | MS.gene73603:CDS |
ATTAGATTTGATGGCATTGG+CGG | 0.500985 | 7.1:-70293865 | None:intergenic |
TGCAAGAGCCACAATCTGTT+AGG | 0.501553 | 7.1:+70297085 | MS.gene73603:CDS |
CAAATGGCAGACAAGTCATC+AGG | 0.504596 | 7.1:-70294468 | None:intergenic |
TATGCTCCAAATGTCAAATC+GGG | 0.504825 | 7.1:+70293161 | MS.gene73603:CDS |
AACCTATGTAACGTTTGGGT+TGG | 0.506431 | 7.1:-70293921 | None:intergenic |
GTGAACTTCAAATCGGAAAA+GGG | 0.506922 | 7.1:+70293775 | MS.gene73603:CDS |
TACGAGGATCAAGGTTCCCT+TGG | 0.507335 | 7.1:+70293415 | MS.gene73603:CDS |
ACACCCAAGTGTTCTTGTCA+TGG | 0.509409 | 7.1:+70295695 | MS.gene73603:CDS |
TCTGTTGAGAAGTTGGAAGT+TGG | 0.511537 | 7.1:+70293946 | MS.gene73603:CDS |
CACCCAAGTGTTCTTGTCAT+GGG | 0.512599 | 7.1:+70295696 | MS.gene73603:CDS |
ACCATGGATGTATCGATCCA+AGG | 0.517448 | 7.1:-70296334 | None:intergenic |
ATCAAAAGCTCTACCTCGAG+AGG | 0.518482 | 7.1:-70296308 | None:intergenic |
GTGCCTGTGTATCTTATCCA+TGG | 0.520986 | 7.1:+70295552 | MS.gene73603:CDS |
GTTATTGACGACCGGGTCGA+TGG | 0.524989 | 7.1:+70296813 | MS.gene73603:CDS |
GTTACTTGAAGTTATTTCCA+GGG | 0.528637 | 7.1:+70295454 | MS.gene73603:CDS |
ATCCTAGAAGCACAAAATCA+AGG | 0.529986 | 7.1:+70295835 | MS.gene73603:CDS |
TAAGATTATGTATCATGTTG+TGG | 0.532793 | 7.1:+70293711 | MS.gene73603:CDS |
AAGATAGAGGATGGTAAGAG+TGG | 0.533354 | 7.1:+70293991 | MS.gene73603:CDS |
AGATGAAATACTTAGGGAGA+TGG | 0.537029 | 7.1:+70296942 | MS.gene73603:CDS |
CCAGAAGGTCTTGGAACTCC+AGG | 0.539229 | 7.1:-70295621 | None:intergenic |
CGATGAAGAAACAAACAAGT+TGG | 0.539964 | 7.1:+70294395 | MS.gene73603:CDS |
AAGGAGGCGAATTCATGGTT+CGG | 0.541286 | 7.1:+70294167 | MS.gene73603:CDS |
CACAGTCAAGATTAGTCTTG+GGG | 0.541514 | 7.1:+70293608 | MS.gene73603:CDS |
TATAATCTCAAGCTGTTCAT+CGG | 0.543979 | 7.1:-70296243 | None:intergenic |
AATCTTTCTTGCATGAGGGA+TGG | 0.544942 | 7.1:-70295354 | None:intergenic |
TTTATGTTCACAAATTTCCT+CGG | 0.545024 | 7.1:-70294789 | None:intergenic |
TTCGAATCTTTCTTGCATGA+GGG | 0.546637 | 7.1:-70295358 | None:intergenic |
GAAAGCGCAGCATTTGCTTG+AGG | 0.546756 | 7.1:+70296034 | MS.gene73603:CDS |
TGTGTCATATCACATGCTCC+TGG | 0.551693 | 7.1:+70295393 | MS.gene73603:CDS |
GGAATCTTGATACTTGATGA+AGG | 0.552776 | 7.1:+70295807 | MS.gene73603:CDS |
AACGAGGCCATACAAGATAG+AGG | 0.553871 | 7.1:+70293978 | MS.gene73603:CDS |
TCTGCAAAGAGAAGCCTGCA+AGG | 0.554610 | 7.1:+70294148 | MS.gene73603:CDS |
GGAAGAAATGGATACTGCTA+TGG | 0.554695 | 7.1:+70294491 | MS.gene73603:CDS |
CTTCAAAATAATAGTTGCGA+AGG | 0.555833 | 7.1:+70293508 | MS.gene73603:CDS |
TCGAACACAGAGAGATTCAA+TGG | 0.556066 | 7.1:+70295578 | MS.gene73603:CDS |
CCATGGATGTATCGATCCAA+GGG | 0.557758 | 7.1:-70296333 | None:intergenic |
CTCCAAATGTCAAATCGGGT+TGG | 0.559335 | 7.1:+70293165 | MS.gene73603:CDS |
AGTTAGATTCTAAATACTTG+AGG | 0.561826 | 7.1:+70295994 | MS.gene73603:CDS |
AAATAGTGATAGTTCTGAAG+TGG | 0.562045 | 7.1:+70293540 | MS.gene73603:CDS |
TTGAATCTCTCTGTGTTCGA+CGG | 0.562771 | 7.1:-70295575 | None:intergenic |
TAGCCCATGACAAGAACACT+TGG | 0.567881 | 7.1:-70295699 | None:intergenic |
TGGATAAGATACACAGGCAC+GGG | 0.569069 | 7.1:-70295549 | None:intergenic |
GGTAAGAGTGGTGAAAAGGT+AGG | 0.572115 | 7.1:+70294003 | MS.gene73603:CDS |
GAAGCACAAAATCAAGGTTG+AGG | 0.573069 | 7.1:+70295841 | MS.gene73603:CDS |
AGAAGTCATGTTCAAGAAGG+TGG | 0.574592 | 7.1:+70294279 | MS.gene73603:CDS |
AATAGAAGTCATGTTCAAGA+AGG | 0.575845 | 7.1:+70294276 | MS.gene73603:CDS |
TTGCCGAAGATGAATTGAAG+AGG | 0.577257 | 7.1:+70296393 | MS.gene73603:CDS |
CATCAAGTATCAAGATTCCA+GGG | 0.577717 | 7.1:-70295803 | None:intergenic |
CCCTTGGATCGATACATCCA+TGG | 0.580673 | 7.1:+70296333 | MS.gene73603:CDS |
GGCTAGTGCCTAACAGATTG+TGG | 0.581569 | 7.1:-70297093 | None:intergenic |
ACTTAGGGAGATGGTTGAAG+AGG | 0.582988 | 7.1:+70296951 | MS.gene73603:CDS |
GTCCAACCCAAACGTTACAT+AGG | 0.585169 | 7.1:+70293919 | MS.gene73603:CDS |
TTGTCTTCTTGATGGAACTG+AGG | 0.585263 | 7.1:+70294521 | MS.gene73603:CDS |
TTCAATGGCTCCAAAACCTA+CGG | 0.588763 | 7.1:+70295593 | MS.gene73603:CDS |
ATTGACGACCGGGTCGATGG+AGG | 0.593637 | 7.1:+70296816 | MS.gene73603:CDS |
GAAGAACCACATGGAAAGAG+TGG | 0.595454 | 7.1:+70296851 | MS.gene73603:CDS |
GATGAATTGAAGAGGCTAGA+CGG | 0.597436 | 7.1:+70296401 | MS.gene73603:CDS |
GAAAAGGTAGGCGATGCTGC+TGG | 0.601604 | 7.1:+70294015 | MS.gene73603:CDS |
GGTGGCAGAACGTTAATTGG+TGG | 0.602462 | 7.1:+70294297 | MS.gene73603:CDS |
AGTGTATATATTTGTAAACC+AGG | 0.603594 | 7.1:-70296206 | None:intergenic |
GGAATATTCTGTACTAGCTG+CGG | 0.605754 | 7.1:+70294833 | MS.gene73603:CDS |
CTTATCTTCCTCCATCGACC+CGG | 0.610407 | 7.1:-70296824 | None:intergenic |
AGTGGTTAAGCCTTATAGGT+GGG | 0.611188 | 7.1:+70293558 | MS.gene73603:CDS |
CAAGAAAGATTCGAAACAAG+TGG | 0.611888 | 7.1:+70295366 | MS.gene73603:CDS |
GTTGCAGGGTTCAAATGCAG+AGG | 0.612778 | 7.1:+70294754 | MS.gene73603:intron |
GGAACTCCAGGAAGAACCGT+AGG | 0.613738 | 7.1:-70295609 | None:intergenic |
CAAAATCCACACTCTACACA+TGG | 0.616401 | 7.1:+70295499 | MS.gene73603:CDS |
AAGTGGTTAAGCCTTATAGG+TGG | 0.618090 | 7.1:+70293557 | MS.gene73603:CDS |
AAAACTTTGAGAGAAAGCCC+TGG | 0.619123 | 7.1:+70295786 | MS.gene73603:CDS |
TGTATCAGTTATTGACGACC+GGG | 0.624460 | 7.1:+70296806 | MS.gene73603:CDS |
ATGCGAATATCAGATGACAA+AGG | 0.625364 | 7.1:-70293075 | None:intergenic |
GATTCTAAATACTTGAGGAG+AGG | 0.628538 | 7.1:+70295999 | MS.gene73603:CDS |
TAAACCAGGAAGTGTATCAG+AGG | 0.630562 | 7.1:-70296192 | None:intergenic |
AGGCCATACAAGATAGAGGA+TGG | 0.633970 | 7.1:+70293982 | MS.gene73603:CDS |
TGCTGTCCTTCTGTATCACG+AGG | 0.637077 | 7.1:-70297033 | None:intergenic |
AAACAAGTTGGAGCACAAAG+AGG | 0.646088 | 7.1:+70294407 | MS.gene73603:CDS |
ATGGATAAGATACACAGGCA+CGG | 0.650745 | 7.1:-70295550 | None:intergenic |
AAGAACCACATGGAAAGAGT+GGG | 0.651758 | 7.1:+70296852 | MS.gene73603:CDS |
TCAAAAGCTCTACCTCGAGA+GGG | 0.652702 | 7.1:-70296307 | None:intergenic |
GAAAGATTCGAAACAAGTGG+TGG | 0.655623 | 7.1:+70295369 | MS.gene73603:CDS |
ATATCGAATAGAGAAACCAC+TGG | 0.657351 | 7.1:-70293808 | None:intergenic |
GAGCATTGATCAGCTTCGTG+AGG | 0.658839 | 7.1:-70293370 | None:intergenic |
CGTGATACAGAAGGACAGCA+AGG | 0.662256 | 7.1:+70297036 | MS.gene73603:CDS |
ATAAGTATCGAAGAACCACA+TGG | 0.662546 | 7.1:+70296842 | MS.gene73603:CDS |
CGGCCATGGATAAGATACAC+AGG | 0.663444 | 7.1:-70295555 | None:intergenic |
CATATCTTCGAACCGCTGCG+AGG | 0.663868 | 7.1:-70296656 | None:intergenic |
AAAGGGATCAATAGTACCAG+TGG | 0.665894 | 7.1:+70293792 | MS.gene73603:CDS |
TACCACCAGTTACCCTCTCG+AGG | 0.667880 | 7.1:+70296295 | MS.gene73603:CDS |
GCGAATATCAGATGACAAAG+GGG | 0.675109 | 7.1:-70293073 | None:intergenic |
TTTGCACCATGTGTAGAGTG+TGG | 0.676984 | 7.1:-70295505 | None:intergenic |
AGCCCATGACAAGAACACTT+GGG | 0.690203 | 7.1:-70295698 | None:intergenic |
AGAAACCCACTCTTTCCATG+TGG | 0.710886 | 7.1:-70296857 | None:intergenic |
AATCAACTCAGATAACGATG+AGG | 0.714220 | 7.1:+70296097 | MS.gene73603:CDS |
AATATGCCTCGTGATACAGA+AGG | 0.715485 | 7.1:+70297027 | MS.gene73603:CDS |
AAGTTTGAAGATCCTCGCAG+CGG | 0.715513 | 7.1:+70296644 | MS.gene73603:CDS |
GCCTAAGACGATCAAAACGT+AGG | 0.727623 | 7.1:+70293893 | MS.gene73603:CDS |
GCAAAGAGAAGCCTGCAAGG+AGG | 0.740126 | 7.1:+70294151 | MS.gene73603:CDS |
TACCTCGAGAGGGTAACTGG+TGG | 0.749946 | 7.1:-70296297 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATATTTAAAATAATTTAT+CGG | - | chr7.1:70295076-70295095 | None:intergenic | 0.0% |
!!! | TTTAAATTTAGTTTCTTATT+TGG | + | chr7.1:70294931-70294950 | MS.gene73603:intron | 10.0% |
!! | ATTTAAAAGATTAAACTTAC+TGG | - | chr7.1:70293198-70293217 | None:intergenic | 15.0% |
!! | CAAATCATAAAAAATACAAT+AGG | - | chr7.1:70294648-70294667 | None:intergenic | 15.0% |
!! | TATAAAAACACTTAATAAAG+AGG | + | chr7.1:70293444-70293463 | MS.gene73603:CDS | 15.0% |
!! | TTAAATGTATATTCTTGTTA+AGG | - | chr7.1:70294916-70294935 | None:intergenic | 15.0% |
!!! | ATCAAATTTGATTTAAGAAA+AGG | + | chr7.1:70296425-70296444 | MS.gene73603:CDS | 15.0% |
!!! | ATTTTAAATATAATGATAGG+TGG | + | chr7.1:70295083-70295102 | MS.gene73603:intron | 15.0% |
!!! | TAATCTTATTTTGAATAGAT+CGG | - | chr7.1:70293699-70293718 | None:intergenic | 15.0% |
!!! | TGAATTAAATTATGTGATTT+TGG | + | chr7.1:70294678-70294697 | MS.gene73603:intron | 15.0% |
!!! | TTTAAAATAATTTATCGGTT+AGG | - | chr7.1:70295071-70295090 | None:intergenic | 15.0% |
!! | AAATATCTTTCAAAGAAGAA+TGG | + | chr7.1:70294051-70294070 | MS.gene73603:CDS | 20.0% |
!! | TATGATTATGAAGAATGAAA+AGG | + | chr7.1:70296993-70297012 | MS.gene73603:CDS | 20.0% |
!! | TATTTGAGAAATACTTTCAA+TGG | + | chr7.1:70296552-70296571 | MS.gene73603:CDS | 20.0% |
!! | TATTTGTCAAACAAATTGAT+TGG | - | chr7.1:70294260-70294279 | None:intergenic | 20.0% |
!! | TTCACAACATTTATAAAAGA+AGG | - | chr7.1:70293760-70293779 | None:intergenic | 20.0% |
!!! | CTACTGTAATTTTTAAATAG+AGG | + | chr7.1:70294967-70294986 | MS.gene73603:intron | 20.0% |
!!! | GTTTAATTTTAATACGCTAT+CGG | + | chr7.1:70294589-70294608 | MS.gene73603:intron | 20.0% |
!!! | TGTTTTTATATTTCTACCAA+GGG | - | chr7.1:70293434-70293453 | None:intergenic | 20.0% |
!!! | TTCTTTGAAAGATATTTTGA+AGG | - | chr7.1:70294048-70294067 | None:intergenic | 20.0% |
! | AAATACTTTCAATGGCAAAA+TGG | + | chr7.1:70296560-70296579 | MS.gene73603:CDS | 25.0% |
! | AAATGTTGTGAACTTCAAAT+CGG | + | chr7.1:70293768-70293787 | MS.gene73603:CDS | 25.0% |
! | AACTTTATGAAAAATCTCAC+AGG | - | chr7.1:70296533-70296552 | None:intergenic | 25.0% |
! | AAGATTAAACTTACTGGAAT+AGG | - | chr7.1:70293192-70293211 | None:intergenic | 25.0% |
! | AGATTGAAGATGAAATACTT+AGG | + | chr7.1:70296935-70296954 | MS.gene73603:CDS | 25.0% |
! | AGTGTATATATTTGTAAACC+AGG | - | chr7.1:70296209-70296228 | None:intergenic | 25.0% |
! | AGTTAGATTCTAAATACTTG+AGG | + | chr7.1:70295994-70296013 | MS.gene73603:CDS | 25.0% |
! | GATTGAAGATGAAATACTTA+GGG | + | chr7.1:70296936-70296955 | MS.gene73603:CDS | 25.0% |
! | GTCTTGGAAAAATAAAAAAG+TGG | + | chr7.1:70295667-70295686 | MS.gene73603:CDS | 25.0% |
! | TAAGATTATGTATCATGTTG+TGG | + | chr7.1:70293711-70293730 | MS.gene73603:CDS | 25.0% |
! | TATACGTTCAATGAAGAAAT+TGG | + | chr7.1:70294812-70294831 | MS.gene73603:CDS | 25.0% |
! | TTTATGTTCACAAATTTCCT+CGG | - | chr7.1:70294792-70294811 | None:intergenic | 25.0% |
!! | ACTTTGTTTCAGAACAATTT+CGG | + | chr7.1:70295912-70295931 | MS.gene73603:CDS | 25.0% |
!! | GAATGAAACCTTCTTTAAAA+AGG | - | chr7.1:70293671-70293690 | None:intergenic | 25.0% |
!! | GTTTTATGTAAATTTCTACG+AGG | + | chr7.1:70293399-70293418 | MS.gene73603:CDS | 25.0% |
!! | TACAATAGGTTGTAATTTGT+TGG | - | chr7.1:70294634-70294653 | None:intergenic | 25.0% |
!! | TTGTACGAAATAACTTTTCA+CGG | - | chr7.1:70295030-70295049 | None:intergenic | 25.0% |
!!! | AAAAAGCTTTTGAGTTTCTT+TGG | + | chr7.1:70295307-70295326 | MS.gene73603:CDS | 25.0% |
!!! | AACTTCTAGAGTGATTTTTT+TGG | + | chr7.1:70296707-70296726 | MS.gene73603:intron | 25.0% |
!!! | AGTTGATGATAATGTTACTT+TGG | + | chr7.1:70294110-70294129 | MS.gene73603:CDS | 25.0% |
!!! | ATATGGATTTTGAAACCAAA+TGG | + | chr7.1:70294193-70294212 | MS.gene73603:CDS | 25.0% |
!!! | GTGTTTTTATATTTCTACCA+AGG | - | chr7.1:70293435-70293454 | None:intergenic | 25.0% |
!!! | GTTGATGATAATGTTACTTT+GGG | + | chr7.1:70294111-70294130 | MS.gene73603:CDS | 25.0% |
!!! | TACAACATCCTTTTTAAAGA+AGG | + | chr7.1:70293660-70293679 | MS.gene73603:CDS | 25.0% |
!!! | TATGGATTTTGAAACCAAAT+GGG | + | chr7.1:70294194-70294213 | MS.gene73603:CDS | 25.0% |
!!! | TGATTTTTTTGGATTCTGAA+TGG | + | chr7.1:70296718-70296737 | MS.gene73603:intron | 25.0% |
!!! | TGGTTTTATCTTCTTTTCTA+AGG | + | chr7.1:70294698-70294717 | MS.gene73603:intron | 25.0% |
AATAGAAGTCATGTTCAAGA+AGG | + | chr7.1:70294276-70294295 | MS.gene73603:CDS | 30.0% | |
ACGTGTAGTGAAAAATGAAA+AGG | + | chr7.1:70296481-70296500 | MS.gene73603:CDS | 30.0% | |
AGTAATATCCTCAATTCTGT+TGG | - | chr7.1:70295885-70295904 | None:intergenic | 30.0% | |
ATGCCATCAAATCTAATTGA+AGG | + | chr7.1:70293871-70293890 | MS.gene73603:CDS | 30.0% | |
ATTTGCACACAGAAATTACA+TGG | + | chr7.1:70295761-70295780 | MS.gene73603:CDS | 30.0% | |
CAAAGAGTTCAAAAAATGGA+AGG | + | chr7.1:70295524-70295543 | MS.gene73603:CDS | 30.0% | |
CGTACAAAATGTTACACAAT+AGG | + | chr7.1:70295043-70295062 | MS.gene73603:intron | 30.0% | |
CTTCAAAATAATAGTTGCGA+AGG | + | chr7.1:70293508-70293527 | MS.gene73603:CDS | 30.0% | |
GAAGGAATTCGTTTCAAAAA+AGG | + | chr7.1:70294216-70294235 | MS.gene73603:CDS | 30.0% | |
GAATTGAGGATATTACTTTC+TGG | + | chr7.1:70295888-70295907 | MS.gene73603:CDS | 30.0% | |
GTTTCTTCATCGTTAATAGT+TGG | - | chr7.1:70294387-70294406 | None:intergenic | 30.0% | |
TAACGATGAAGAAAAATCAG+AGG | + | chr7.1:70295149-70295168 | MS.gene73603:CDS | 30.0% | |
TATAATCTCAAGCTGTTCAT+CGG | - | chr7.1:70296246-70296265 | None:intergenic | 30.0% | |
TGACACTTACATGAAGAATT+TGG | + | chr7.1:70294338-70294357 | MS.gene73603:CDS | 30.0% | |
! | AGTTACTTGAAGTTATTTCC+AGG | + | chr7.1:70295453-70295472 | MS.gene73603:CDS | 30.0% |
! | GATCTAGATTTGTTTGAAAG+AGG | + | chr7.1:70296608-70296627 | MS.gene73603:CDS | 30.0% |
! | GATTTTTATCTGATCTTTCG+TGG | + | chr7.1:70293632-70293651 | MS.gene73603:CDS | 30.0% |
! | GTTACTTGAAGTTATTTCCA+GGG | + | chr7.1:70295454-70295473 | MS.gene73603:CDS | 30.0% |
! | GTTTCTTTGGAAAAACATTG+CGG | + | chr7.1:70295320-70295339 | MS.gene73603:CDS | 30.0% |
! | TCAATTAGATTTGATGGCAT+TGG | - | chr7.1:70293871-70293890 | None:intergenic | 30.0% |
! | TTTCTTTGGAAAAACATTGC+GGG | + | chr7.1:70295321-70295340 | MS.gene73603:CDS | 30.0% |
!! | AAACATGTTTTGGATTGTCT+TGG | + | chr7.1:70295651-70295670 | MS.gene73603:CDS | 30.0% |
!! | AAATAGTGATAGTTCTGAAG+TGG | + | chr7.1:70293540-70293559 | MS.gene73603:CDS | 30.0% |
!! | GCTCAGAACAAATCTTATTT+TGG | - | chr7.1:70296453-70296472 | None:intergenic | 30.0% |
!! | TGGTGATGTAAAACATGTTT+TGG | + | chr7.1:70295641-70295660 | MS.gene73603:CDS | 30.0% |
!! | TTTTCTTCTTGCCATTTAGA+AGG | - | chr7.1:70296916-70296935 | None:intergenic | 30.0% |
!!! | AACTATTATTTTGAAGCCGT+TGG | - | chr7.1:70293504-70293523 | None:intergenic | 30.0% |
!!! | ATAGCTTGCTTTGTTTTTGA+AGG | - | chr7.1:70296747-70296766 | None:intergenic | 30.0% |
!!! | ATCTTCTTTTCTAAGGCTAA+AGG | + | chr7.1:70294705-70294724 | MS.gene73603:intron | 30.0% |
!!! | TTCTAGCATGATTTTTAGTG+AGG | + | chr7.1:70296876-70296895 | MS.gene73603:CDS | 30.0% |
AACGATGAGGAAAAAATGCA+GGG | + | chr7.1:70296110-70296129 | MS.gene73603:CDS | 35.0% | |
AACTGTTATATACCGTTGCA+GGG | + | chr7.1:70294740-70294759 | MS.gene73603:intron | 35.0% | |
AAGACAAAAATGGCAGAAAG+AGG | + | chr7.1:70295107-70295126 | MS.gene73603:CDS | 35.0% | |
AAGGTTGAGGAAATGCTTAA+TGG | + | chr7.1:70295854-70295873 | MS.gene73603:CDS | 35.0% | |
AATAAAGAGGTTTATGCGAC+TGG | + | chr7.1:70293457-70293476 | MS.gene73603:CDS | 35.0% | |
AATCAACTCAGATAACGATG+AGG | + | chr7.1:70296097-70296116 | MS.gene73603:CDS | 35.0% | |
ACAGAAACTGCAGAAGAAAA+TGG | + | chr7.1:70296265-70296284 | MS.gene73603:CDS | 35.0% | |
AGAAGAACCTATGTAACGTT+TGG | - | chr7.1:70293929-70293948 | None:intergenic | 35.0% | |
AGATGAAATACTTAGGGAGA+TGG | + | chr7.1:70296942-70296961 | MS.gene73603:CDS | 35.0% | |
AGGCCTTCAATTAGATTTGA+TGG | - | chr7.1:70293877-70293896 | None:intergenic | 35.0% | |
AGTATCCATTTCTTCCCAAA+TGG | - | chr7.1:70294487-70294506 | None:intergenic | 35.0% | |
ATATCGAATAGAGAAACCAC+TGG | - | chr7.1:70293811-70293830 | None:intergenic | 35.0% | |
ATGCGAATATCAGATGACAA+AGG | - | chr7.1:70293078-70293097 | None:intergenic | 35.0% | |
CAAGAAAGATTCGAAACAAG+TGG | + | chr7.1:70295366-70295385 | MS.gene73603:CDS | 35.0% | |
CATCAAGTATCAAGATTCCA+GGG | - | chr7.1:70295806-70295825 | None:intergenic | 35.0% | |
CGATGAAGAAACAAACAAGT+TGG | + | chr7.1:70294395-70294414 | MS.gene73603:CDS | 35.0% | |
CTATGCTCCAAATGTCAAAT+CGG | + | chr7.1:70293160-70293179 | MS.gene73603:CDS | 35.0% | |
GAAGAACCTATGTAACGTTT+GGG | - | chr7.1:70293928-70293947 | None:intergenic | 35.0% | |
GAGAAAAGAAATGACGAGAA+AGG | - | chr7.1:70295430-70295449 | None:intergenic | 35.0% | |
GATAGGTGGAAAGACAAAAA+TGG | + | chr7.1:70295097-70295116 | MS.gene73603:intron | 35.0% | |
GATTCTAAATACTTGAGGAG+AGG | + | chr7.1:70295999-70296018 | MS.gene73603:CDS | 35.0% | |
GCAAAAAACTTATCTGCACA+TGG | - | chr7.1:70296377-70296396 | None:intergenic | 35.0% | |
GGAATCTTGATACTTGATGA+AGG | + | chr7.1:70295807-70295826 | MS.gene73603:CDS | 35.0% | |
GGCAGAAAAAGACAATGTTT+GGG | + | chr7.1:70295242-70295261 | MS.gene73603:CDS | 35.0% | |
GGTGCAAAGAGTTCAAAAAA+TGG | + | chr7.1:70295520-70295539 | MS.gene73603:CDS | 35.0% | |
GTAAATTTCTACGAGGATCA+AGG | + | chr7.1:70293406-70293425 | MS.gene73603:CDS | 35.0% | |
GTGAACTTCAAATCGGAAAA+GGG | + | chr7.1:70293775-70293794 | MS.gene73603:CDS | 35.0% | |
TAACGATGAGGAAAAAATGC+AGG | + | chr7.1:70296109-70296128 | MS.gene73603:CDS | 35.0% | |
TAGCCTCTTCAATTCATCTT+CGG | - | chr7.1:70296399-70296418 | None:intergenic | 35.0% | |
TATGCTCCAAATGTCAAATC+GGG | + | chr7.1:70293161-70293180 | MS.gene73603:CDS | 35.0% | |
TCAATGGCAAAATGGAAAAG+AGG | + | chr7.1:70296568-70296587 | MS.gene73603:CDS | 35.0% | |
TCATCAAGTATCAAGATTCC+AGG | - | chr7.1:70295807-70295826 | None:intergenic | 35.0% | |
TGCGAATATCAGATGACAAA+GGG | - | chr7.1:70293077-70293096 | None:intergenic | 35.0% | |
TGTGAACTTCAAATCGGAAA+AGG | + | chr7.1:70293774-70293793 | MS.gene73603:CDS | 35.0% | |
TTACCATCCTCTATCTTGTA+TGG | - | chr7.1:70293988-70294007 | None:intergenic | 35.0% | |
TTCATCGACGTTTATGAAAG+TGG | + | chr7.1:70296164-70296183 | MS.gene73603:CDS | 35.0% | |
TTCGAATCTTTCTTGCATGA+GGG | - | chr7.1:70295361-70295380 | None:intergenic | 35.0% | |
TTGTGGAAGATCCTTCTAAA+TGG | + | chr7.1:70296902-70296921 | MS.gene73603:CDS | 35.0% | |
TTTCGAATCTTTCTTGCATG+AGG | - | chr7.1:70295362-70295381 | None:intergenic | 35.0% | |
! | AACCTTGATTTTGTGCTTCT+AGG | - | chr7.1:70295840-70295859 | None:intergenic | 35.0% |
! | AATTCATGGTTCGGATGATA+TGG | + | chr7.1:70294176-70294195 | MS.gene73603:CDS | 35.0% |
! | ACATGTTTTACATCACCAGA+AGG | - | chr7.1:70295639-70295658 | None:intergenic | 35.0% |
! | AGCACTTCGTGAACAAATTT+TGG | - | chr7.1:70295969-70295988 | None:intergenic | 35.0% |
! | ATCCTAGAAGCACAAAATCA+AGG | + | chr7.1:70295835-70295854 | MS.gene73603:CDS | 35.0% |
! | ATCGAATTTTCATCCTCCAA+CGG | + | chr7.1:70293485-70293504 | MS.gene73603:CDS | 35.0% |
! | ATTAGATTTGATGGCATTGG+CGG | - | chr7.1:70293868-70293887 | None:intergenic | 35.0% |
! | CTTTCTAGAAGGATCAGATT+TGG | + | chr7.1:70297059-70297078 | MS.gene73603:CDS | 35.0% |
! | GAAACTCAAAAGCTTTTTGC+TGG | - | chr7.1:70295305-70295324 | None:intergenic | 35.0% |
! | GTTAATTGGTGGCAGAAAAT+GGG | + | chr7.1:70294308-70294327 | MS.gene73603:CDS | 35.0% |
! | TTGTCTTTTTCTGCCGATAT+TGG | - | chr7.1:70295237-70295256 | None:intergenic | 35.0% |
! | TTTTCACTACACGTGAGATT+AGG | - | chr7.1:70296475-70296494 | None:intergenic | 35.0% |
!! | ATAAGTATCGAAGAACCACA+TGG | + | chr7.1:70296842-70296861 | MS.gene73603:CDS | 35.0% |
!! | ATCACAGTCAAGATTAGTCT+TGG | + | chr7.1:70293606-70293625 | MS.gene73603:CDS | 35.0% |
!! | CATGGGCTATACTTCATTTT+TGG | + | chr7.1:70295713-70295732 | MS.gene73603:CDS | 35.0% |
!! | TCACAGTCAAGATTAGTCTT+GGG | + | chr7.1:70293607-70293626 | MS.gene73603:CDS | 35.0% |
!! | TGCATCTTTTCTTTGAGTTC+TGG | - | chr7.1:70295276-70295295 | None:intergenic | 35.0% |
!! | TGCTGAAGGTATTAGCTTAA+CGG | + | chr7.1:70296683-70296702 | MS.gene73603:intron | 35.0% |
!!! | GATTTTGAAACCAAATGGGA+AGG | + | chr7.1:70294198-70294217 | MS.gene73603:CDS | 35.0% |
!!! | GATTTTTAGTGAGGAGTTTG+TGG | + | chr7.1:70296885-70296904 | MS.gene73603:CDS | 35.0% |
!!! | TATTATTTTGAAGCCGTTGG+AGG | - | chr7.1:70293501-70293520 | None:intergenic | 35.0% |
AAAGAGGTTCTGCTACTAAC+TGG | + | chr7.1:70296584-70296603 | MS.gene73603:CDS | 40.0% | |
AAAGGGATCAATAGTACCAG+TGG | + | chr7.1:70293792-70293811 | MS.gene73603:CDS | 40.0% | |
AACCTATGTAACGTTTGGGT+TGG | - | chr7.1:70293924-70293943 | None:intergenic | 40.0% | |
AAGAACCACATGGAAAGAGT+GGG | + | chr7.1:70296852-70296871 | MS.gene73603:CDS | 40.0% | |
AAGATAGAGGATGGTAAGAG+TGG | + | chr7.1:70293991-70294010 | MS.gene73603:CDS | 40.0% | |
AATATGCCTCGTGATACAGA+AGG | + | chr7.1:70297027-70297046 | MS.gene73603:CDS | 40.0% | |
AATCTTTCTTGCATGAGGGA+TGG | - | chr7.1:70295357-70295376 | None:intergenic | 40.0% | |
AATTCCTCTGATACACTTCC+TGG | + | chr7.1:70296188-70296207 | MS.gene73603:CDS | 40.0% | |
AGAAGTCATGTTCAAGAAGG+TGG | + | chr7.1:70294279-70294298 | MS.gene73603:CDS | 40.0% | |
AGGTTCTTCTGTTGAGAAGT+TGG | + | chr7.1:70293939-70293958 | MS.gene73603:CDS | 40.0% | |
AGTGTCAAAAAGCGATGATG+AGG | + | chr7.1:70294437-70294456 | MS.gene73603:CDS | 40.0% | |
ATGGATAAGATACACAGGCA+CGG | - | chr7.1:70295553-70295572 | None:intergenic | 40.0% | |
CAAAATCCACACTCTACACA+TGG | + | chr7.1:70295499-70295518 | MS.gene73603:CDS | 40.0% | |
CAACTGTTATATACCGTTGC+AGG | + | chr7.1:70294739-70294758 | MS.gene73603:intron | 40.0% | |
CGGCAGAAAAAGACAATGTT+TGG | + | chr7.1:70295241-70295260 | MS.gene73603:CDS | 40.0% | |
GAAACGAATTCCTTCCCATT+TGG | - | chr7.1:70294211-70294230 | None:intergenic | 40.0% | |
GAAAGATTCGAAACAAGTGG+TGG | + | chr7.1:70295369-70295388 | MS.gene73603:CDS | 40.0% | |
GAAGCACAAAATCAAGGTTG+AGG | + | chr7.1:70295841-70295860 | MS.gene73603:CDS | 40.0% | |
GATGAATTGAAGAGGCTAGA+CGG | + | chr7.1:70296401-70296420 | MS.gene73603:CDS | 40.0% | |
GCGAATATCAGATGACAAAG+GGG | - | chr7.1:70293076-70293095 | None:intergenic | 40.0% | |
GGAAGAAATGGATACTGCTA+TGG | + | chr7.1:70294491-70294510 | MS.gene73603:CDS | 40.0% | |
GGAATATTCTGTACTAGCTG+CGG | + | chr7.1:70294833-70294852 | MS.gene73603:CDS | 40.0% | |
GTGTATCAGTTATTGACGAC+CGG | + | chr7.1:70296805-70296824 | MS.gene73603:CDS | 40.0% | |
TCAGATGAATCCCACCTATA+AGG | - | chr7.1:70293571-70293590 | None:intergenic | 40.0% | |
TCGAACACAGAGAGATTCAA+TGG | + | chr7.1:70295578-70295597 | MS.gene73603:CDS | 40.0% | |
TCTGTTGAGAAGTTGGAAGT+TGG | + | chr7.1:70293946-70293965 | MS.gene73603:CDS | 40.0% | |
TGAAAAATCTCACAGGTGCA+AGG | - | chr7.1:70296526-70296545 | None:intergenic | 40.0% | |
TGATCCGGATGAACCAATAT+CGG | + | chr7.1:70295221-70295240 | MS.gene73603:CDS | 40.0% | |
TGGAACTTCCAACAGAATTG+AGG | + | chr7.1:70295874-70295893 | MS.gene73603:CDS | 40.0% | |
TGTATCAGTTATTGACGACC+GGG | + | chr7.1:70296806-70296825 | MS.gene73603:CDS | 40.0% | |
TTCAATGGCTCCAAAACCTA+CGG | + | chr7.1:70295593-70295612 | MS.gene73603:CDS | 40.0% | |
TTGAATCTCTCTGTGTTCGA+CGG | - | chr7.1:70295578-70295597 | None:intergenic | 40.0% | |
TTGCCGAAGATGAATTGAAG+AGG | + | chr7.1:70296393-70296412 | MS.gene73603:CDS | 40.0% | |
TTGTCTTCTTGATGGAACTG+AGG | + | chr7.1:70294521-70294540 | MS.gene73603:CDS | 40.0% | |
TTTACATCACCAGAAGGTCT+TGG | - | chr7.1:70295633-70295652 | None:intergenic | 40.0% | |
! | AAAACTTTGAGAGAAAGCCC+TGG | + | chr7.1:70295786-70295805 | MS.gene73603:CDS | 40.0% |
! | AAACAAGTTGGAGCACAAAG+AGG | + | chr7.1:70294407-70294426 | MS.gene73603:CDS | 40.0% |
! | AAGTGGTTAAGCCTTATAGG+TGG | + | chr7.1:70293557-70293576 | MS.gene73603:CDS | 40.0% |
! | AGGGCTTTCTCTCAAAGTTT+TGG | - | chr7.1:70295787-70295806 | None:intergenic | 40.0% |
! | AGTGGTTAAGCCTTATAGGT+GGG | + | chr7.1:70293558-70293577 | MS.gene73603:CDS | 40.0% |
! | CATGTGTAGAGTGTGGATTT+TGG | - | chr7.1:70295501-70295520 | None:intergenic | 40.0% |
! | CGTTAATTGGTGGCAGAAAA+TGG | + | chr7.1:70294307-70294326 | MS.gene73603:CDS | 40.0% |
! | CTGAAGTGGTTAAGCCTTAT+AGG | + | chr7.1:70293554-70293573 | MS.gene73603:CDS | 40.0% |
! | TAAACCAGGAAGTGTATCAG+AGG | - | chr7.1:70296195-70296214 | None:intergenic | 40.0% |
! | TGATGACTTGTCTGCCATTT+GGG | + | chr7.1:70294470-70294489 | MS.gene73603:CDS | 40.0% |
! | TGCACTAACTTTTTACGACG+CGG | + | chr7.1:70293126-70293145 | MS.gene73603:CDS | 40.0% |
!! | CACAGTCAAGATTAGTCTTG+GGG | + | chr7.1:70293608-70293627 | MS.gene73603:CDS | 40.0% |
!! | GATTTTGGTGCAAGGACTAA+TGG | - | chr7.1:70295486-70295505 | None:intergenic | 40.0% |
!! | GTAGAGCTTTTGATAACCCT+TGG | + | chr7.1:70296317-70296336 | MS.gene73603:CDS | 40.0% |
!! | TCCTACGTTTTGATCGTCTT+AGG | - | chr7.1:70293897-70293916 | None:intergenic | 40.0% |
!!! | AAGTTGGTACTTTTCGAACG+AGG | + | chr7.1:70293962-70293981 | MS.gene73603:CDS | 40.0% |
!!! | CAAACCATTTTTTGCTGACC+AGG | - | chr7.1:70296786-70296805 | None:intergenic | 40.0% |
!!! | GTTGCTGTTTTGATCAACCA+TGG | - | chr7.1:70296353-70296372 | None:intergenic | 40.0% |
AACGAGGCCATACAAGATAG+AGG | + | chr7.1:70293978-70293997 | MS.gene73603:CDS | 45.0% | |
AAGGAGGCGAATTCATGGTT+CGG | + | chr7.1:70294167-70294186 | MS.gene73603:CDS | 45.0% | |
AAGTTTGAAGATCCTCGCAG+CGG | + | chr7.1:70296644-70296663 | MS.gene73603:CDS | 45.0% | |
ACACCCAAGTGTTCTTGTCA+TGG | + | chr7.1:70295695-70295714 | MS.gene73603:CDS | 45.0% | |
ACTTAGGGAGATGGTTGAAG+AGG | + | chr7.1:70296951-70296970 | MS.gene73603:CDS | 45.0% | |
AGAAACCCACTCTTTCCATG+TGG | - | chr7.1:70296860-70296879 | None:intergenic | 45.0% | |
AGCCCATGACAAGAACACTT+GGG | - | chr7.1:70295701-70295720 | None:intergenic | 45.0% | |
AGGCCATACAAGATAGAGGA+TGG | + | chr7.1:70293982-70294001 | MS.gene73603:CDS | 45.0% | |
ATCAAAAGCTCTACCTCGAG+AGG | - | chr7.1:70296311-70296330 | None:intergenic | 45.0% | |
CAAATGGCAGACAAGTCATC+AGG | - | chr7.1:70294471-70294490 | None:intergenic | 45.0% | |
CACCCAAGTGTTCTTGTCAT+GGG | + | chr7.1:70295696-70295715 | MS.gene73603:CDS | 45.0% | |
CGAAGATATGCTTGTGCTGA+AGG | + | chr7.1:70296669-70296688 | MS.gene73603:intron | 45.0% | |
CTCAACTCATGCTACTGATC+CGG | + | chr7.1:70295206-70295225 | MS.gene73603:CDS | 45.0% | |
CTCCAAATGTCAAATCGGGT+TGG | + | chr7.1:70293165-70293184 | MS.gene73603:CDS | 45.0% | |
GAAGAACCACATGGAAAGAG+TGG | + | chr7.1:70296851-70296870 | MS.gene73603:CDS | 45.0% | |
GAAGGTGGCAGAACGTTAAT+TGG | + | chr7.1:70294294-70294313 | MS.gene73603:CDS | 45.0% | |
GCAGCAAGTTGTCTTCTTGA+TGG | + | chr7.1:70294513-70294532 | MS.gene73603:CDS | 45.0% | |
GCCTAAGACGATCAAAACGT+AGG | + | chr7.1:70293893-70293912 | MS.gene73603:CDS | 45.0% | |
GGATGGTAAGAGTGGTGAAA+AGG | + | chr7.1:70293999-70294018 | MS.gene73603:CDS | 45.0% | |
GGTAAGAGTGGTGAAAAGGT+AGG | + | chr7.1:70294003-70294022 | MS.gene73603:CDS | 45.0% | |
GTCCAACCCAAACGTTACAT+AGG | + | chr7.1:70293919-70293938 | MS.gene73603:CDS | 45.0% | |
GTGCCTGTGTATCTTATCCA+TGG | + | chr7.1:70295552-70295571 | MS.gene73603:CDS | 45.0% | |
TAGCCCATGACAAGAACACT+TGG | - | chr7.1:70295702-70295721 | None:intergenic | 45.0% | |
TCAAAAGCTCTACCTCGAGA+GGG | - | chr7.1:70296310-70296329 | None:intergenic | 45.0% | |
TCGTCCTGGTCAGCAAAAAA+TGG | + | chr7.1:70296779-70296798 | MS.gene73603:CDS | 45.0% | |
TCTGCATTTGAACCCTGCAA+CGG | - | chr7.1:70294755-70294774 | None:intergenic | 45.0% | |
TGCAAGAGCCACAATCTGTT+AGG | + | chr7.1:70297085-70297104 | MS.gene73603:CDS | 45.0% | |
TGGATAAGATACACAGGCAC+GGG | - | chr7.1:70295552-70295571 | None:intergenic | 45.0% | |
TGTGTCATATCACATGCTCC+TGG | + | chr7.1:70295393-70295412 | MS.gene73603:CDS | 45.0% | |
TTTGCACCATGTGTAGAGTG+TGG | - | chr7.1:70295508-70295527 | None:intergenic | 45.0% | |
! | ACCATGGATGTATCGATCCA+AGG | - | chr7.1:70296337-70296356 | None:intergenic | 45.0% |
! | AGAAAGGTTTTTCCAGCTCC+AGG | - | chr7.1:70295414-70295433 | None:intergenic | 45.0% |
! | AGGACTAATGGTCTTTTCCC+TGG | - | chr7.1:70295474-70295493 | None:intergenic | 45.0% |
! | ATAGTTGGCTCTTCTTCGAC+TGG | - | chr7.1:70294372-70294391 | None:intergenic | 45.0% |
! | CCATGGATGTATCGATCCAA+GGG | - | chr7.1:70296336-70296355 | None:intergenic | 45.0% |
! | CTGATGACTTGTCTGCCATT+TGG | + | chr7.1:70294469-70294488 | MS.gene73603:CDS | 45.0% |
! | GTCCAACCCGATTTGACATT+TGG | - | chr7.1:70293170-70293189 | None:intergenic | 45.0% |
! | GTCTGCCATTTGGGAAGAAA+TGG | + | chr7.1:70294479-70294498 | MS.gene73603:CDS | 45.0% |
!! | AGAGTGTGGATTTTGGTGCA+AGG | - | chr7.1:70295494-70295513 | None:intergenic | 45.0% |
!! | TCTGCCGATATTGGTTCATC+CGG | - | chr7.1:70295228-70295247 | None:intergenic | 45.0% |
!!! | AGAGGTTTTAGAAGACACCG+AGG | + | chr7.1:70294772-70294791 | MS.gene73603:CDS | 45.0% |
!! | AAAACTAATATTATAAATAT+AGG | - | chr7.1:70294566-70294585 | None:intergenic | 5.0% |
!!! | ATTATTTTAAATATAATGAT+AGG | + | chr7.1:70295080-70295099 | MS.gene73603:intron | 5.0% |
!!! | TATATTTATAATATTAGTTT+TGG | + | chr7.1:70294565-70294584 | MS.gene73603:intron | 5.0% |
ATATCACATGCTCCTGGAGC+TGG | + | chr7.1:70295399-70295418 | MS.gene73603:CDS | 50.0% | |
CCAAAACCTACGGTTCTTCC+TGG | + | chr7.1:70295603-70295622 | MS.gene73603:CDS | 50.0% | |
CCCTTGGATCGATACATCCA+TGG | + | chr7.1:70296333-70296352 | MS.gene73603:CDS | 50.0% | |
CGGCCATGGATAAGATACAC+AGG | - | chr7.1:70295558-70295577 | None:intergenic | 50.0% | |
CTTATCTTCCTCCATCGACC+CGG | - | chr7.1:70296827-70296846 | None:intergenic | 50.0% | |
GAAAAACATTGCGGGCTCCA+TGG | + | chr7.1:70295329-70295348 | MS.gene73603:CDS | 50.0% | |
GGTGGCAGAACGTTAATTGG+TGG | + | chr7.1:70294297-70294316 | MS.gene73603:CDS | 50.0% | |
GTTGCAGGGTTCAAATGCAG+AGG | + | chr7.1:70294754-70294773 | MS.gene73603:intron | 50.0% | |
TACGAGGATCAAGGTTCCCT+TGG | + | chr7.1:70293415-70293434 | MS.gene73603:CDS | 50.0% | |
TCTGCAAAGAGAAGCCTGCA+AGG | + | chr7.1:70294148-70294167 | MS.gene73603:CDS | 50.0% | |
TTGCATGAGGGATGGTTCCA+TGG | - | chr7.1:70295349-70295368 | None:intergenic | 50.0% | |
! | CCAGGAAGAACCGTAGGTTT+TGG | - | chr7.1:70295606-70295625 | None:intergenic | 50.0% |
! | GAAAGCGCAGCATTTGCTTG+AGG | + | chr7.1:70296034-70296053 | MS.gene73603:CDS | 50.0% |
!! | AAGAAGAATGGTGCTGCTGC+TGG | + | chr7.1:70294063-70294082 | MS.gene73603:CDS | 50.0% |
!! | GAGCATTGATCAGCTTCGTG+AGG | - | chr7.1:70293373-70293392 | None:intergenic | 50.0% |
CAGCTTCGTGAGGTTGTCTC+TGG | - | chr7.1:70293363-70293382 | None:intergenic | 55.0% | |
CATATCTTCGAACCGCTGCG+AGG | - | chr7.1:70296659-70296678 | None:intergenic | 55.0% | |
CCAGAAGGTCTTGGAACTCC+AGG | - | chr7.1:70295624-70295643 | None:intergenic | 55.0% | |
CCATGAATTCGCCTCCTTGC+AGG | - | chr7.1:70294165-70294184 | None:intergenic | 55.0% | |
CCTGCAAGGAGGCGAATTCA+TGG | + | chr7.1:70294162-70294181 | MS.gene73603:CDS | 55.0% | |
CCTGGAGTTCCAAGACCTTC+TGG | + | chr7.1:70295621-70295640 | MS.gene73603:CDS | 55.0% | |
CTCTACCTCGAGAGGGTAAC+TGG | - | chr7.1:70296303-70296322 | None:intergenic | 55.0% | |
GAAAAGGTAGGCGATGCTGC+TGG | + | chr7.1:70294015-70294034 | MS.gene73603:CDS | 55.0% | |
GCAAAGAGAAGCCTGCAAGG+AGG | + | chr7.1:70294151-70294170 | MS.gene73603:CDS | 55.0% | |
GGAACTCCAGGAAGAACCGT+AGG | - | chr7.1:70295612-70295631 | None:intergenic | 55.0% | |
GTTATTGACGACCGGGTCGA+TGG | + | chr7.1:70296813-70296832 | MS.gene73603:CDS | 55.0% | |
TACCACCAGTTACCCTCTCG+AGG | + | chr7.1:70296295-70296314 | MS.gene73603:CDS | 55.0% | |
TACCTCGAGAGGGTAACTGG+TGG | - | chr7.1:70296300-70296319 | None:intergenic | 55.0% | |
! | ATTGCACGCGCTTTTCGTCC+TGG | + | chr7.1:70296765-70296784 | MS.gene73603:CDS | 55.0% |
ATTGACGACCGGGTCGATGG+AGG | + | chr7.1:70296816-70296835 | MS.gene73603:CDS | 60.0% | |
CGCAGCATTTGCTTGAGGCG+CGG | + | chr7.1:70296039-70296058 | MS.gene73603:CDS | 60.0% | |
CTCTCTGTGTTCGACGGCCA+TGG | - | chr7.1:70295572-70295591 | None:intergenic | 60.0% | |
GCAGCATTTGCTTGAGGCGC+GGG | + | chr7.1:70296040-70296059 | MS.gene73603:CDS | 60.0% | |
ATTTGCTTGAGGCGCGGGCG+AGG | + | chr7.1:70296045-70296064 | MS.gene73603:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 70293051 | 70297113 | 70293051 | ID=MS.gene73603 |
chr7.1 | mRNA | 70293051 | 70297113 | 70293051 | ID=MS.gene73603.t1;Parent=MS.gene73603 |
chr7.1 | exon | 70293051 | 70293197 | 70293051 | ID=MS.gene73603.t1.exon1;Parent=MS.gene73603.t1 |
chr7.1 | CDS | 70293051 | 70293197 | 70293051 | ID=cds.MS.gene73603.t1;Parent=MS.gene73603.t1 |
chr7.1 | exon | 70293331 | 70294542 | 70293331 | ID=MS.gene73603.t1.exon2;Parent=MS.gene73603.t1 |
chr7.1 | CDS | 70293331 | 70294542 | 70293331 | ID=cds.MS.gene73603.t1;Parent=MS.gene73603.t1 |
chr7.1 | exon | 70294761 | 70294895 | 70294761 | ID=MS.gene73603.t1.exon3;Parent=MS.gene73603.t1 |
chr7.1 | CDS | 70294761 | 70294895 | 70294761 | ID=cds.MS.gene73603.t1;Parent=MS.gene73603.t1 |
chr7.1 | exon | 70295102 | 70296681 | 70295102 | ID=MS.gene73603.t1.exon4;Parent=MS.gene73603.t1 |
chr7.1 | CDS | 70295102 | 70296681 | 70295102 | ID=cds.MS.gene73603.t1;Parent=MS.gene73603.t1 |
chr7.1 | exon | 70296759 | 70297113 | 70296759 | ID=MS.gene73603.t1.exon5;Parent=MS.gene73603.t1 |
chr7.1 | CDS | 70296759 | 70297113 | 70296759 | ID=cds.MS.gene73603.t1;Parent=MS.gene73603.t1 |
Gene Sequence |
Protein sequence |