AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene74405

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74405.t1 MTR_3g007870 69.466 131 38 1 175 303 321 451 1.12e-50 180
MS.gene74405.t1 MTR_5g095970 68.702 131 39 1 175 303 327 457 4.32e-49 176
MS.gene74405.t1 MTR_3g460810 58.197 122 43 3 189 304 306 425 1.10e-33 132
MS.gene74405.t1 MTR_5g077100 48.598 107 53 1 188 292 351 457 1.30e-23 103
MS.gene74405.t1 MTR_7g062920 43.103 116 61 4 192 304 326 439 8.16e-18 85.5
MS.gene74405.t1 MTR_4g105070 39.655 116 64 4 192 304 341 453 1.88e-17 84.3
MS.gene74405.t1 MTR_3g068025 37.879 132 75 5 178 304 318 447 2.40e-17 84.0
MS.gene74405.t1 MTR_7g062660 42.241 116 62 4 192 304 319 432 4.10e-17 83.6
MS.gene74405.t1 MTR_7g062750 42.241 116 62 4 192 304 328 441 4.61e-17 83.2
MS.gene74405.t1 MTR_7g062890 43.103 116 61 4 192 304 324 437 5.41e-17 83.2
MS.gene74405.t1 MTR_7g062900 41.379 116 63 4 192 304 299 412 9.13e-17 82.4
MS.gene74405.t1 MTR_8g067720 40.496 121 58 5 190 303 323 436 1.35e-16 81.6
MS.gene74405.t1 MTR_7g062950 41.379 116 63 4 192 304 326 439 1.66e-16 81.6
MS.gene74405.t1 MTR_7g062770 42.241 116 62 4 192 304 330 443 2.82e-16 80.9
MS.gene74405.t1 MTR_8g067735 40.187 107 61 2 190 293 343 449 3.43e-16 80.5
MS.gene74405.t1 MTR_7g062680 42.241 116 62 4 192 304 336 449 3.92e-16 80.5
MS.gene74405.t1 MTR_0015s0090 39.167 120 65 3 191 302 314 433 5.10e-16 80.1
MS.gene74405.t1 MTR_1g052275 41.379 116 63 4 192 304 328 441 6.09e-16 79.7
MS.gene74405.t1 MTR_0015s0030 36.975 119 68 2 191 302 312 430 6.30e-16 79.7
MS.gene74405.t1 MTR_7g062940 41.379 116 63 4 192 304 325 438 6.63e-16 79.7
MS.gene74405.t1 MTR_0015s0060 38.333 120 66 3 191 302 21 140 6.69e-16 78.6
MS.gene74405.t1 MTR_7g062700 40.517 116 64 4 192 304 328 441 1.34e-15 79.0
MS.gene74405.t1 MTR_8g067630 40.000 105 60 2 190 291 272 376 1.39e-15 78.6
MS.gene74405.t1 MTR_8g067690 41.322 121 57 5 190 303 340 453 2.04e-15 78.2
MS.gene74405.t1 MTR_7g063030 38.710 124 70 5 185 304 320 441 2.05e-15 78.2
MS.gene74405.t1 MTR_8g067930 38.318 107 63 2 190 293 324 430 2.49e-15 77.8
MS.gene74405.t1 MTR_7g063030 38.710 124 70 5 185 304 314 435 2.53e-15 77.8
MS.gene74405.t1 MTR_7g056647 38.739 111 65 2 195 303 520 629 5.36e-15 77.0
MS.gene74405.t1 MTR_7g056650 39.091 110 64 2 195 302 348 456 5.38e-15 77.0
MS.gene74405.t1 MTR_7g056647 38.739 111 65 2 195 303 358 467 5.59e-15 77.0
MS.gene74405.t1 MTR_1g048360 42.857 105 57 2 192 293 324 428 6.69e-15 76.6
MS.gene74405.t1 MTR_7g056667 38.739 111 65 2 194 302 509 618 7.29e-15 76.6
MS.gene74405.t1 MTR_4g093140 37.815 119 66 4 189 303 325 439 7.48e-15 76.6
MS.gene74405.t1 MTR_5g035910 39.655 116 65 3 192 304 331 444 8.09e-15 76.3
MS.gene74405.t1 MTR_4g093110 38.136 118 65 4 190 303 326 439 9.08e-15 76.3
MS.gene74405.t1 MTR_4g093070 38.679 106 62 2 190 292 332 437 1.33e-14 75.9
MS.gene74405.t1 MTR_7g056640 37.838 111 66 2 194 302 504 613 2.44e-14 75.1
MS.gene74405.t1 MTR_7g063010 32.051 156 100 5 153 304 284 437 5.71e-14 73.9
MS.gene74405.t1 MTR_7g056680 38.182 110 65 2 195 302 490 598 6.34e-14 73.9
MS.gene74405.t1 MTR_7g056680 38.182 110 65 2 195 302 494 602 6.35e-14 73.9
MS.gene74405.t1 MTR_7g056623 37.838 111 66 2 194 302 462 571 6.59e-14 73.9
MS.gene74405.t1 MTR_7g056680 38.182 110 65 2 195 302 489 597 6.62e-14 73.6
MS.gene74405.t1 MTR_7g056680 38.182 110 65 2 195 302 485 593 6.67e-14 73.6
MS.gene74405.t1 MTR_7g056680 38.182 110 65 2 195 302 329 437 6.81e-14 73.6
MS.gene74405.t1 MTR_7g056510 38.182 110 65 2 195 302 497 605 8.61e-14 73.6
MS.gene74405.t1 MTR_7g056450 37.037 108 65 2 199 304 511 617 9.03e-14 73.2
MS.gene74405.t1 MTR_7g056510 38.182 110 65 2 195 302 507 615 9.19e-14 73.2
MS.gene74405.t1 MTR_7g056510 38.182 110 65 2 195 302 507 615 1.05e-13 73.2
MS.gene74405.t1 MTR_7g056450 37.037 108 65 2 199 304 501 607 1.08e-13 73.2
MS.gene74405.t1 MTR_1g105585 35.398 113 70 2 194 304 341 452 1.14e-13 72.8
MS.gene74405.t1 MTR_1g105595 34.513 113 71 2 194 304 287 398 1.23e-13 72.8
MS.gene74405.t1 MTR_7g056590 37.838 111 66 2 194 302 350 459 1.23e-13 72.8
MS.gene74405.t1 MTR_1g105595 34.513 113 71 2 194 304 334 445 1.26e-13 72.8
MS.gene74405.t1 MTR_4g093050 34.188 117 71 3 190 303 331 444 1.76e-13 72.4
MS.gene74405.t1 MTR_1g099260 40.000 120 63 3 192 304 328 445 1.88e-13 72.0
MS.gene74405.t1 MTR_8g013580 36.607 112 68 2 195 304 498 608 2.04e-13 72.4
MS.gene74405.t1 MTR_7g062730 38.889 108 63 3 192 296 103 210 2.07e-13 69.3
MS.gene74405.t1 MTR_7g056663 37.273 110 66 2 195 302 514 622 3.03e-13 71.6
MS.gene74405.t1 MTR_4g081640 37.500 112 67 2 195 304 456 566 3.09e-13 71.6
MS.gene74405.t1 MTR_7g056510 38.384 99 59 1 195 291 507 605 3.74e-13 71.2
MS.gene74405.t1 MTR_5g067250 37.838 111 66 2 195 303 490 599 3.83e-13 71.2
MS.gene74405.t1 MTR_7g451040 38.655 119 67 3 192 304 106 224 4.55e-13 71.2
MS.gene74405.t1 MTR_6g057770 35.398 113 70 2 192 302 559 670 4.94e-13 71.2
MS.gene74405.t1 MTR_8g028065 35.398 113 70 2 192 302 556 667 5.79e-13 70.9
MS.gene74405.t1 MTR_8g013620 35.714 112 69 2 195 304 453 563 5.85e-13 70.9
MS.gene74405.t1 MTR_8g013620 35.714 112 69 2 195 304 493 603 6.10e-13 70.5
MS.gene74405.t1 MTR_8g013620 35.714 112 69 2 195 304 493 603 6.30e-13 70.9
MS.gene74405.t1 MTR_7g116130 35.965 114 67 3 192 302 340 450 6.36e-13 70.5
MS.gene74405.t1 MTR_4g091690 37.624 101 61 1 195 293 529 629 6.69e-13 70.5
MS.gene74405.t1 MTR_0074s0060 35.398 113 70 2 192 302 295 406 6.78e-13 70.5
MS.gene74405.t1 MTR_6g463710 35.398 113 70 2 192 302 559 670 7.19e-13 70.5
MS.gene74405.t1 MTR_7g062990 39.130 115 66 4 193 304 332 445 7.33e-13 70.5
MS.gene74405.t1 MTR_4g093080 33.913 115 70 3 192 303 336 447 8.12e-13 70.5
MS.gene74405.t1 MTR_7g115740 35.965 114 67 3 192 302 268 378 9.70e-13 69.7
MS.gene74405.t1 MTR_8g013610 36.607 112 68 2 195 304 494 604 9.78e-13 70.1
MS.gene74405.t1 MTR_5g092120 36.607 112 67 2 195 302 58 169 1.07e-12 68.9
MS.gene74405.t1 MTR_4g081655 37.500 112 67 2 195 304 528 638 1.10e-12 69.7
MS.gene74405.t1 MTR_4g081655 37.500 112 67 2 195 304 528 638 1.20e-12 69.7
MS.gene74405.t1 MTR_7g115740 35.965 114 67 3 192 302 344 454 1.20e-12 69.7
MS.gene74405.t1 MTR_4g081655 37.500 112 67 2 195 304 493 603 1.21e-12 69.7
MS.gene74405.t1 MTR_8g068050 40.517 116 62 4 192 303 340 452 1.31e-12 69.7
MS.gene74405.t1 MTR_2g011270 31.897 116 76 2 195 308 494 608 1.39e-12 69.7
MS.gene74405.t1 MTR_6g463830 35.398 113 70 2 192 302 558 669 1.42e-12 69.7
MS.gene74405.t1 MTR_7g056617 37.615 109 65 2 194 300 489 596 1.42e-12 69.3
MS.gene74405.t1 MTR_7g056420 33.036 112 72 2 195 304 829 939 1.52e-12 69.7
MS.gene74405.t1 MTR_7g056430 33.036 112 72 2 195 304 829 939 1.58e-12 69.7
MS.gene74405.t1 MTR_6g463700 34.783 115 72 2 192 304 528 641 1.80e-12 69.3
MS.gene74405.t1 MTR_8g013620 36.364 99 61 1 195 291 493 591 1.83e-12 68.9
MS.gene74405.t1 MTR_8g068050 40.517 116 62 4 192 303 230 342 1.87e-12 68.9
MS.gene74405.t1 MTR_4g091680 38.614 101 60 1 195 293 490 590 1.89e-12 69.3
MS.gene74405.t1 MTR_6g057750 34.783 115 72 2 192 304 573 686 2.13e-12 68.9
MS.gene74405.t1 MTR_3g020230 33.929 112 71 2 195 304 453 563 2.23e-12 68.9
MS.gene74405.t1 MTR_1g031780 38.235 102 61 1 193 292 38 139 2.33e-12 68.2
MS.gene74405.t1 MTR_1g014240 35.043 117 70 3 189 302 349 462 2.48e-12 68.6
MS.gene74405.t1 MTR_0007s0020 33.913 115 73 2 192 304 559 672 2.49e-12 68.9
MS.gene74405.t1 MTR_3g019420 35.714 112 69 2 195 304 489 599 2.70e-12 68.6
MS.gene74405.t1 MTR_4g098890 34.545 110 69 2 195 302 1054 1162 3.18e-12 68.9
MS.gene74405.t1 MTR_3g019490 34.821 112 70 2 195 304 483 593 3.48e-12 68.6
MS.gene74405.t1 MTR_3g019390 34.821 112 70 2 195 304 398 508 3.72e-12 68.2
MS.gene74405.t1 MTR_6g016040 40.179 112 58 5 194 302 105 210 3.85e-12 67.8
MS.gene74405.t1 MTR_3g019390 34.821 112 70 2 195 304 488 598 3.98e-12 68.2
MS.gene74405.t1 MTR_1g105650 33.628 113 72 2 194 304 341 452 4.37e-12 67.8
MS.gene74405.t1 MTR_8g465570 37.500 104 62 2 203 304 464 566 4.43e-12 68.2
MS.gene74405.t1 MTR_4g118855 33.333 132 83 3 177 303 40 171 4.56e-12 67.0
MS.gene74405.t1 MTR_3g019390 34.821 112 70 2 195 304 488 598 4.82e-12 67.8
MS.gene74405.t1 MTR_2g019990 30.688 189 115 7 195 372 77 260 5.11e-12 67.4
MS.gene74405.t1 MTR_8g465470 37.500 104 62 2 203 304 534 636 5.15e-12 67.8
MS.gene74405.t1 MTR_4g091760 36.634 101 62 1 195 293 518 618 5.38e-12 67.8
MS.gene74405.t1 MTR_8g013560 36.607 112 68 2 195 304 496 606 5.73e-12 67.8
MS.gene74405.t1 MTR_4g091780 35.644 101 63 1 195 293 512 612 6.43e-12 67.4
MS.gene74405.t1 MTR_3g020280 33.929 112 72 1 195 304 491 602 6.57e-12 67.4
MS.gene74405.t1 MTR_3g051420 35.714 112 69 2 195 304 452 562 1.04e-11 67.0
MS.gene74405.t1 MTR_5g047060 30.303 198 121 7 96 285 413 601 1.04e-11 67.0
MS.gene74405.t1 MTR_8g465410 33.929 112 71 2 195 304 495 605 1.06e-11 67.0
MS.gene74405.t1 MTR_3g067770 31.429 140 74 5 176 302 46 176 1.14e-11 65.1
MS.gene74405.t1 MTR_4g093040 37.607 117 67 3 190 303 344 457 1.22e-11 66.6
MS.gene74405.t1 MTR_2g011340 32.759 116 75 2 195 308 510 624 1.24e-11 66.6
MS.gene74405.t1 MTR_4g091840 37.624 101 61 1 195 293 523 623 1.25e-11 66.6
MS.gene74405.t1 MTR_4g091850 34.821 112 70 2 195 304 521 631 1.47e-11 66.6
MS.gene74405.t1 MTR_1g080740 35.652 115 70 3 193 304 508 621 1.51e-11 66.6
MS.gene74405.t1 MTR_4g093040 37.607 117 67 3 190 303 262 375 1.63e-11 66.2
MS.gene74405.t1 MTR_3g067770 31.429 140 74 5 176 302 46 176 1.69e-11 65.5
MS.gene74405.t1 MTR_1g105725 34.234 111 70 2 194 302 352 461 1.71e-11 66.2
MS.gene74405.t1 MTR_2g075250 31.818 110 73 1 195 302 654 763 1.78e-11 66.2
MS.gene74405.t1 MTR_2g075250 31.818 110 73 1 195 302 559 668 1.84e-11 66.2
MS.gene74405.t1 MTR_2g011230 33.929 112 71 2 195 304 504 614 2.18e-11 65.9
MS.gene74405.t1 MTR_3g115500 34.821 112 69 2 195 303 38 148 2.20e-11 65.1
MS.gene74405.t1 MTR_1g105700 34.351 131 80 3 176 304 335 461 2.23e-11 65.9
MS.gene74405.t1 MTR_8g087740 36.893 103 61 3 193 292 658 759 2.34e-11 65.9
MS.gene74405.t1 MTR_1g104890 33.333 111 71 2 194 302 331 440 2.41e-11 65.5
MS.gene74405.t1 MTR_1g104890 33.333 111 71 2 194 302 331 440 2.56e-11 65.5
MS.gene74405.t1 MTR_7g115300 33.094 139 88 4 169 304 490 626 2.70e-11 65.5
MS.gene74405.t1 MTR_8g052200 34.653 101 64 1 193 291 449 549 2.79e-11 65.5
MS.gene74405.t1 MTR_3g115500 34.821 112 69 2 195 303 56 166 3.18e-11 64.7
MS.gene74405.t1 MTR_8g465580 34.615 104 65 2 203 304 493 595 3.47e-11 65.1
MS.gene74405.t1 MTR_1g105615 33.628 113 71 2 194 304 329 439 3.83e-11 64.7
MS.gene74405.t1 MTR_3g019580 33.929 112 71 2 195 304 495 605 4.06e-11 65.1
MS.gene74405.t1 MTR_3g062570 38.542 96 55 3 193 285 491 585 4.09e-11 65.1
MS.gene74405.t1 MTR_3g062570 38.542 96 55 3 193 285 606 700 4.16e-11 65.1
MS.gene74405.t1 MTR_7g082380 36.885 122 68 4 177 292 27 145 4.24e-11 64.3
MS.gene74405.t1 MTR_1g105750 30.667 150 91 4 157 304 297 435 4.27e-11 64.7
MS.gene74405.t1 MTR_8g016330 31.298 131 88 1 175 303 432 562 4.45e-11 65.1
MS.gene74405.t1 MTR_3g019580 33.929 112 71 2 195 304 460 570 4.64e-11 64.7
MS.gene74405.t1 MTR_3g019580 33.929 112 71 2 195 304 492 602 4.71e-11 64.7
MS.gene74405.t1 MTR_6g011330 28.859 149 91 3 161 294 84 232 4.71e-11 64.3
MS.gene74405.t1 MTR_4g091730 33.600 125 73 3 173 293 427 545 5.15e-11 64.7
MS.gene74405.t1 MTR_4g091820 37.624 101 61 1 195 293 521 621 5.53e-11 64.7
MS.gene74405.t1 MTR_5g067310 35.922 103 63 2 203 303 4 105 5.86e-11 63.5
MS.gene74405.t1 MTR_6g012810 35.644 101 63 1 195 293 589 689 6.22e-11 64.7
MS.gene74405.t1 MTR_6g012810 35.644 101 63 1 195 293 589 689 6.31e-11 64.3
MS.gene74405.t1 MTR_3g062570 38.542 96 55 3 193 285 355 449 6.34e-11 64.3
MS.gene74405.t1 MTR_7g061660 30.894 123 73 3 193 303 59 181 7.09e-11 63.5
MS.gene74405.t1 MTR_8g052060 28.947 114 79 1 193 304 427 540 7.46e-11 64.3
MS.gene74405.t1 MTR_2g011240 33.036 112 72 2 195 304 491 601 8.44e-11 63.9
MS.gene74405.t1 MTR_8g051640 32.692 104 68 1 203 304 443 546 9.34e-11 63.9
MS.gene74405.t1 MTR_3g007600 34.234 111 69 3 195 302 26 135 9.83e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74405.t1 AT5G55830 51.613 124 56 3 185 304 343 466 4.35e-29 119
MS.gene74405.t1 AT5G03140 34.756 164 101 2 137 294 300 463 2.29e-21 96.3
MS.gene74405.t1 AT3G53380 43.519 108 58 2 189 293 358 465 2.53e-19 90.1
MS.gene74405.t1 AT5G65600 42.735 117 60 4 190 302 333 446 2.59e-17 84.0
MS.gene74405.t1 AT3G55550 41.880 117 62 4 192 304 331 445 7.16e-17 82.8
MS.gene74405.t1 AT5G10530 36.290 124 75 3 177 296 305 428 1.20e-16 82.0
MS.gene74405.t1 AT3G59730 36.184 152 81 5 150 290 275 421 1.37e-16 81.6
MS.gene74405.t1 AT1G70130 38.710 124 70 4 185 304 311 432 3.71e-16 80.5
MS.gene74405.t1 AT2G43690 43.966 116 59 4 192 304 322 434 5.99e-16 80.1
MS.gene74405.t1 AT2G43690 43.966 116 59 4 192 304 322 434 5.99e-16 80.1
MS.gene74405.t1 AT2G43690 43.966 116 59 4 192 304 286 398 7.12e-16 79.7
MS.gene74405.t1 AT3G59750 39.655 116 66 3 192 304 288 402 1.16e-15 79.0
MS.gene74405.t1 AT3G59740 37.241 145 85 3 150 288 273 417 2.17e-15 78.2
MS.gene74405.t1 AT3G59700 39.655 116 66 3 192 304 323 437 2.36e-15 78.2
MS.gene74405.t1 AT5G59270 40.171 117 65 4 191 304 333 447 2.38e-15 78.2
MS.gene74405.t1 AT5G59270 40.171 117 65 4 191 304 336 450 2.45e-15 78.2
MS.gene74405.t1 AT5G59270 40.171 117 65 4 191 304 352 466 2.69e-15 77.8
MS.gene74405.t1 AT2G43700 40.323 124 67 5 185 304 289 409 3.16e-15 77.8
MS.gene74405.t1 AT2G43700 40.323 124 67 5 185 304 289 409 3.16e-15 77.8
MS.gene74405.t1 AT2G43700 40.323 124 67 5 185 304 289 409 3.16e-15 77.8
MS.gene74405.t1 AT2G43700 40.323 124 67 5 185 304 289 409 3.16e-15 77.8
MS.gene74405.t1 AT5G01560 36.585 123 74 3 185 303 341 463 3.30e-15 77.8
MS.gene74405.t1 AT2G43700 40.323 124 67 5 185 304 313 433 4.24e-15 77.4
MS.gene74405.t1 AT5G06740 37.069 116 70 2 189 302 324 438 6.88e-15 76.6
MS.gene74405.t1 AT5G01550 37.097 124 73 3 185 303 357 480 7.06e-15 76.6
MS.gene74405.t1 AT5G06740 37.069 116 70 2 189 302 312 426 7.19e-15 76.6
MS.gene74405.t1 AT3G08870 36.364 121 74 2 185 302 346 466 1.23e-14 75.9
MS.gene74405.t1 AT3G08870 36.364 121 74 2 185 302 367 487 1.30e-14 75.9
MS.gene74405.t1 AT2G37710 38.596 114 65 4 194 304 334 445 1.40e-14 75.9
MS.gene74405.t1 AT4G02420 40.000 110 61 4 198 304 341 448 1.44e-14 75.9
MS.gene74405.t1 AT4G29050 39.516 124 69 4 185 304 321 442 1.44e-14 75.9
MS.gene74405.t1 AT4G29050 39.516 124 69 4 185 304 335 456 1.58e-14 75.5
MS.gene74405.t1 AT1G61860 37.391 115 69 2 191 302 69 183 3.03e-14 73.9
MS.gene74405.t1 AT5G59260 38.462 117 67 4 191 304 339 453 4.17e-14 74.3
MS.gene74405.t1 AT4G04570 36.029 136 79 3 169 302 151 280 4.40e-14 73.6
MS.gene74405.t1 AT4G04570 36.029 136 79 3 169 302 315 444 5.19e-14 73.9
MS.gene74405.t1 AT4G04570 36.029 136 79 3 169 302 315 444 5.52e-14 73.9
MS.gene74405.t1 AT4G04540 37.838 111 66 2 194 302 311 420 8.47e-14 73.2
MS.gene74405.t1 AT3G53810 38.596 114 65 4 194 304 334 445 9.24e-14 73.2
MS.gene74405.t1 AT4G04540 37.838 111 66 2 194 302 340 449 9.26e-14 73.2
MS.gene74405.t1 AT4G04540 37.838 111 66 2 194 302 340 449 9.29e-14 72.8
MS.gene74405.t1 AT4G04540 37.838 111 66 2 194 302 340 449 1.04e-13 72.8
MS.gene74405.t1 AT4G11480 36.242 149 81 5 159 304 285 422 2.45e-13 72.0
MS.gene74405.t1 AT4G11480 36.242 149 81 5 159 304 285 422 2.95e-13 71.2
MS.gene74405.t1 AT1G15530 38.095 105 63 1 192 294 346 450 3.99e-13 71.2
MS.gene74405.t1 AT4G02410 39.091 110 62 4 198 304 346 453 4.16e-13 71.2
MS.gene74405.t1 AT3G45860 39.130 115 63 5 194 304 338 449 5.04e-13 70.9
MS.gene74405.t1 AT4G04500 38.739 111 65 2 194 302 332 441 5.77e-13 70.9
MS.gene74405.t1 AT4G04500 38.739 111 65 2 194 302 332 441 5.91e-13 70.5
MS.gene74405.t1 AT4G04500 38.739 111 65 2 194 302 332 441 5.91e-13 70.5
MS.gene74405.t1 AT2G32800 36.800 125 70 4 189 304 97 221 6.68e-13 70.9
MS.gene74405.t1 AT4G23280 33.333 126 81 2 181 304 316 440 1.40e-12 69.7
MS.gene74405.t1 AT5G13160 30.455 220 126 9 175 372 43 257 1.47e-12 68.9
MS.gene74405.t1 AT4G23280 35.398 113 70 2 194 304 331 442 1.69e-12 69.3
MS.gene74405.t1 AT3G45430 37.719 114 65 4 194 304 331 441 1.88e-12 69.3
MS.gene74405.t1 AT3G45430 37.719 114 65 4 194 304 331 441 1.88e-12 69.3
MS.gene74405.t1 AT3G45430 37.719 114 65 4 194 304 331 441 1.88e-12 69.3
MS.gene74405.t1 AT4G04510 39.640 111 64 2 194 302 328 437 2.07e-12 68.9
MS.gene74405.t1 AT4G23290 39.000 100 59 1 194 291 350 449 2.15e-12 68.9
MS.gene74405.t1 AT4G04510 39.640 111 64 2 194 302 326 435 2.22e-12 68.9
MS.gene74405.t1 AT4G23290 39.000 100 59 1 194 291 307 406 2.51e-12 68.9
MS.gene74405.t1 AT4G23150 36.842 114 67 4 194 304 323 434 2.51e-12 68.9
MS.gene74405.t1 AT1G79680 38.462 117 68 3 189 302 415 530 2.88e-12 68.6
MS.gene74405.t1 AT4G00960 35.398 113 70 2 194 304 43 154 3.60e-12 66.6
MS.gene74405.t1 AT4G23180 30.968 155 93 5 153 304 303 446 5.66e-12 67.8
MS.gene74405.t1 AT4G00960 35.398 113 70 2 194 304 43 154 6.37e-12 67.0
MS.gene74405.t1 AT4G11480 40.351 114 63 4 194 304 308 419 6.71e-12 67.4
MS.gene74405.t1 AT4G23180 30.968 155 93 5 153 304 303 446 6.78e-12 67.4
MS.gene74405.t1 AT5G18610 30.688 189 115 7 195 372 71 254 7.47e-12 67.0
MS.gene74405.t1 AT5G18610 30.688 189 115 7 195 372 71 254 7.47e-12 67.0
MS.gene74405.t1 AT5G18610 30.688 189 115 7 195 372 71 254 7.47e-12 67.0
MS.gene74405.t1 AT1G56145 33.043 115 73 2 192 304 569 681 8.18e-12 67.4
MS.gene74405.t1 AT4G23180 30.968 155 93 5 153 304 303 446 8.32e-12 67.0
MS.gene74405.t1 AT1G56145 33.043 115 73 2 192 304 672 784 9.41e-12 67.4
MS.gene74405.t1 AT1G69730 39.286 112 64 3 195 303 435 545 1.03e-11 67.0
MS.gene74405.t1 AT4G31110 36.290 124 75 3 183 303 429 551 1.08e-11 67.0
MS.gene74405.t1 AT4G31110 36.290 124 75 3 183 303 407 529 1.15e-11 66.6
MS.gene74405.t1 AT1G19390 39.655 116 66 3 183 295 427 541 1.58e-11 66.2
MS.gene74405.t1 AT1G11330 31.056 161 104 6 145 302 462 618 1.87e-11 66.2
MS.gene74405.t1 AT3G51550 31.724 145 88 5 167 304 494 634 2.33e-11 65.9
MS.gene74405.t1 AT4G11480 42.574 101 54 3 194 291 308 407 2.36e-11 65.9
MS.gene74405.t1 AT1G70740 38.947 95 56 1 200 292 55 149 2.40e-11 65.1
MS.gene74405.t1 AT1G16130 39.623 106 60 3 193 295 402 506 2.44e-11 65.9
MS.gene74405.t1 AT4G38830 36.937 111 67 2 194 302 331 440 2.55e-11 65.5
MS.gene74405.t1 AT1G70740 38.947 95 56 1 200 292 43 137 2.58e-11 65.1
MS.gene74405.t1 AT4G23220 35.088 114 68 4 194 304 324 434 2.82e-11 65.5
MS.gene74405.t1 AT4G11470 36.283 113 69 2 194 304 331 442 3.09e-11 65.5
MS.gene74405.t1 AT4G11470 36.283 113 69 2 194 304 326 437 3.10e-11 65.5
MS.gene74405.t1 AT3G09010 29.286 140 96 2 168 304 6 145 4.00e-11 63.9
MS.gene74405.t1 AT4G23270 33.051 118 76 2 189 304 308 424 4.18e-11 65.1
MS.gene74405.t1 AT4G23270 33.051 118 76 2 189 304 308 424 4.68e-11 64.7
MS.gene74405.t1 AT4G23270 33.051 118 76 2 189 304 308 424 4.68e-11 64.7
MS.gene74405.t1 AT1G61610 35.514 107 67 1 195 299 513 619 5.16e-11 64.7
MS.gene74405.t1 AT4G23200 33.333 114 73 2 193 304 322 434 5.27e-11 64.7
MS.gene74405.t1 AT4G23320 34.513 113 71 2 194 304 170 281 5.40e-11 64.3
MS.gene74405.t1 AT4G23320 34.513 113 71 2 194 304 170 281 5.40e-11 64.3
MS.gene74405.t1 AT4G23200 33.333 114 73 2 193 304 322 434 5.45e-11 64.3
MS.gene74405.t1 AT4G23320 34.513 113 71 2 194 304 191 302 5.61e-11 64.3
MS.gene74405.t1 AT1G61610 35.514 107 67 1 195 299 513 619 6.17e-11 64.7
MS.gene74405.t1 AT5G24080 31.469 143 88 6 167 302 361 500 6.31e-11 64.3
MS.gene74405.t1 AT5G24080 31.469 143 88 6 167 302 361 500 6.31e-11 64.3
MS.gene74405.t1 AT3G09010 29.286 140 96 2 168 304 6 145 6.33e-11 63.9
MS.gene74405.t1 AT5G24080 35.088 114 68 4 192 302 517 627 6.87e-11 64.3
MS.gene74405.t1 AT1G53430 29.730 148 94 2 166 303 579 726 6.92e-11 64.3
MS.gene74405.t1 AT1G11330 30.247 162 106 6 145 302 462 620 7.36e-11 64.3
MS.gene74405.t1 AT1G53430 29.730 148 94 2 166 303 620 767 7.38e-11 64.3
MS.gene74405.t1 AT4G05200 31.858 113 74 2 194 304 334 445 8.31e-11 63.9
MS.gene74405.t1 AT4G05200 31.858 113 74 2 194 304 352 463 8.34e-11 63.9
MS.gene74405.t1 AT1G53440 33.333 111 72 1 195 303 655 765 8.64e-11 64.3

Find 80 sgRNAs with CRISPR-Local

Find 144 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTTCTTGTTTATGATTTC+AGG 0.128468 6.4:-1012469 MS.gene74405:CDS
CGGAATTGTCCATTGATTTA+AGG 0.144179 6.4:-1012541 MS.gene74405:CDS
ACAACATAGGATTTGATTTC+AGG 0.188114 6.4:-1012352 MS.gene74405:CDS
AGAAGCGAGGTGAAGATTTA+TGG 0.220995 6.4:+1013636 None:intergenic
GCAAATCTGCCATTTGATTA+AGG 0.261700 6.4:+1013579 None:intergenic
ACTCAACAATTTCCCTATAT+CGG 0.263623 6.4:+1012409 None:intergenic
CCGTAACCAACAATTCTTCT+AGG 0.288996 6.4:+1012665 None:intergenic
CTGAAAAGGCACACTGTTGC+TGG 0.317337 6.4:+1013845 None:intergenic
GATAGATTGATGAACTCTTT+AGG 0.321358 6.4:+1012208 None:intergenic
CAAAGTGTCAAGTGTTTGTT+TGG 0.346705 6.4:-1013268 MS.gene74405:CDS
ATTTACAAAGAACCCGATAT+AGG 0.362820 6.4:-1012422 MS.gene74405:CDS
TTCTGTGTTGTTCGCTGAAA+AGG 0.364782 6.4:+1013831 None:intergenic
TGTTCAACGTGTTCATGCTT+TGG 0.365416 6.4:+1012163 None:intergenic
ACAGTTTGATCGCAGAGAAC+TGG 0.372145 6.4:-1012711 MS.gene74405:CDS
CTTAAATCAATGGACAATTC+CGG 0.374658 6.4:+1012542 None:intergenic
CAAACAAACACTTGACACTT+TGG 0.384061 6.4:+1013269 None:intergenic
ATCTATCAGAAGGGGTTTCA+TGG 0.391971 6.4:-1012192 MS.gene74405:CDS
CAAGAATTCAGTTCAGTTGC+TGG 0.392317 6.4:-1012516 MS.gene74405:CDS
TCTTGGTGATTCTCTGGTAG+TGG 0.397905 6.4:+1013805 None:intergenic
ATTCTTGTGCCTTAAATCAA+TGG 0.404681 6.4:+1012532 None:intergenic
TTTACAAAGAACCCGATATA+GGG 0.407305 6.4:-1012421 MS.gene74405:CDS
ACTTTCTCTTGGTGATTCTC+TGG 0.414380 6.4:+1013799 None:intergenic
GTTGAAGAAAAGATGGAAAT+GGG 0.415151 6.4:-1013988 MS.gene74405:CDS
AGTTGAAGAAAAGATGGAAA+TGG 0.416895 6.4:-1013989 MS.gene74405:CDS
CTTGGTGATTCTCTGGTAGT+GGG 0.423532 6.4:+1013806 None:intergenic
TTTCATCCTAGAAGAATTGT+TGG 0.425698 6.4:-1012671 MS.gene74405:CDS
TGAAAATGATCTAAAGTAAG+AGG 0.431084 6.4:+1013943 None:intergenic
CTCAACAATTTCCCTATATC+GGG 0.433676 6.4:+1012410 None:intergenic
CCTAGAAGAATTGTTGGTTA+CGG 0.439362 6.4:-1012665 MS.gene74405:CDS
ATTAACGAATCGGTGAGAAT+TGG 0.440764 6.4:+1013727 None:intergenic
TTAAATCAATGGACAATTCC+GGG 0.442855 6.4:+1012543 None:intergenic
GAAGCGAGGTGAAGATTTAT+GGG 0.448315 6.4:+1013637 None:intergenic
ACAAGCAACAAACCAGGTTT+CGG 0.455176 6.4:+1012739 None:intergenic
ATTTACAAATGGAAACTCAA+TGG 0.460245 6.4:+1012314 None:intergenic
TCCCTTCCTCCTTAATCAAA+TGG 0.465674 6.4:-1013588 MS.gene74405:CDS
CAACATCGTGAACTTTCTCT+TGG 0.472848 6.4:+1013788 None:intergenic
TATGGAAGTTGAAGAAAAGA+TGG 0.486088 6.4:-1013995 MS.gene74405:CDS
GAACCATCGCTGCAGTGAAA+AGG 0.497106 6.4:-1012601 MS.gene74405:CDS
TTTAGTCGGCGACGATAGCA+TGG 0.503418 6.4:-1013686 MS.gene74405:CDS
GGAAGGGAGTTGAACCAATC+GGG 0.504121 6.4:+1013603 None:intergenic
AGGAAGGGAGTTGAACCAAT+CGG 0.509122 6.4:+1013602 None:intergenic
AGGTCGAGGCATTCTAATGA+AGG 0.512079 6.4:-1012581 MS.gene74405:CDS
CAGTTTGATCGCAGAGAACT+GGG 0.518838 6.4:-1012710 MS.gene74405:CDS
ATTCAGTTCAGTTGCTGGGT+AGG 0.520137 6.4:-1012511 MS.gene74405:CDS
ATGCTATGAGTTTACTGAGT+AGG 0.525944 6.4:-1011981 None:intergenic
TTCTACATTCACAACCCGAT+TGG 0.526217 6.4:-1013617 MS.gene74405:CDS
TGCCATTTGATTAAGGAGGA+AGG 0.526986 6.4:+1013586 None:intergenic
ATCACTCGACATTAACGAAT+CGG 0.528278 6.4:+1013717 None:intergenic
GATAGGCTTATGAAGCAAGT+TGG 0.532634 6.4:-1012007 MS.gene74405:intron
TCTATCAGAAGGGGTTTCAT+GGG 0.540611 6.4:-1012191 MS.gene74405:CDS
ATATAGGGAAATTGTTGAGT+TGG 0.543093 6.4:-1012406 MS.gene74405:CDS
TTGTTGTTGTTGAGAAACTT+CGG 0.545787 6.4:+1013765 None:intergenic
AAGAATTCAGTTCAGTTGCT+GGG 0.547293 6.4:-1012515 MS.gene74405:CDS
AGGTGGTGCATTTGATTCAG+AGG 0.553195 6.4:-1012135 MS.gene74405:intron
GCCATTTGATTAAGGAGGAA+GGG 0.555349 6.4:+1013587 None:intergenic
GTTGCAGAGCAATTCTCAAT+CGG 0.565072 6.4:-1013549 MS.gene74405:intron
GAGTTCATCAATCTATCAGA+AGG 0.570272 6.4:-1012202 MS.gene74405:CDS
AGGGAAGACCGAGTTTCTCC+CGG 0.570730 6.4:-1012561 MS.gene74405:CDS
GAATGTTAAGATAGTAATGA+GGG 0.573320 6.4:-1013908 MS.gene74405:CDS
GGACAATTCCGGGAGAAACT+CGG 0.573970 6.4:+1012553 None:intergenic
CCGTCTCAGAATGACAACAT+AGG 0.580005 6.4:-1012365 MS.gene74405:CDS
TCTCTGCGATCAAACTGTCT+AGG 0.580104 6.4:+1012716 None:intergenic
AAGTAAGAGGTTCATCACAT+AGG 0.581914 6.4:+1013956 None:intergenic
CGAATGTTAAGATAGTAATG+AGG 0.584856 6.4:-1013909 MS.gene74405:CDS
AGTTCATCAATCTATCAGAA+GGG 0.588773 6.4:-1012201 MS.gene74405:CDS
GTTCATCAATCTATCAGAAG+GGG 0.602376 6.4:-1012200 MS.gene74405:CDS
GTGTGTTGAGAAAGATGAGC+TGG 0.603587 6.4:-1012489 MS.gene74405:CDS
AGTGATTCAGCTCATTTAGT+CGG 0.603818 6.4:-1013700 MS.gene74405:CDS
TTTGGAATGTTGATGTCAGT+AGG 0.606970 6.4:-1013250 MS.gene74405:intron
GAAGATGAAGTTCAAGCAGA+AGG 0.608435 6.4:-1013877 MS.gene74405:CDS
TCGCTGCAGTGAAAAGGTCG+AGG 0.608854 6.4:-1012595 MS.gene74405:CDS
CATCGAACAATACCGAAACC+TGG 0.616991 6.4:-1012751 MS.gene74405:CDS
GGTCGAGGCATTCTAATGAA+GGG 0.626484 6.4:-1012580 MS.gene74405:CDS
TCTAGGACAAGCAACAAACC+AGG 0.628340 6.4:+1012733 None:intergenic
CCTATGTTGTCATTCTGAGA+CGG 0.635229 6.4:+1012365 None:intergenic
TGAACACGTTGAACAAGTGA+AGG 0.638459 6.4:-1012155 MS.gene74405:CDS
AATCTGCCATTTGATTAAGG+AGG 0.686726 6.4:+1013582 None:intergenic
GGGTTGTGAATGTAGAAGCG+AGG 0.701051 6.4:+1013623 None:intergenic
GAATCGGTGAGAATTGGTGT+CGG 0.705683 6.4:+1013733 None:intergenic
ACACGTTGAACAAGTGAAGG+TGG 0.751122 6.4:-1012152 MS.gene74405:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGTTTTTTGAAAATTCAA+AGG - chr6.4:1012936-1012955 MS.gene74405:intron 15.0%
!! AAATAACAATCAACAAATTC+AGG + chr6.4:1012767-1012786 None:intergenic 20.0%
!! ATTTGATTACATCGAAAAAA+TGG - chr6.4:1013028-1013047 MS.gene74405:intron 20.0%
!!! GGTATTATTCTTTTTTGAAA+TGG - chr6.4:1013184-1013203 MS.gene74405:intron 20.0%
!!! GTTGATTGTTATTTATCAAA+TGG - chr6.4:1012773-1012792 MS.gene74405:intron 20.0%
!!! TATGTTGTTTTTTCTTTGTT+GGG - chr6.4:1013162-1013181 MS.gene74405:intron 20.0%
!!! TATTCTTTTTTGAAATGGAA+GGG - chr6.4:1013189-1013208 MS.gene74405:intron 20.0%
!!! TTATTCTTTTTTGAAATGGA+AGG - chr6.4:1013188-1013207 MS.gene74405:intron 20.0%
! AAATGGAATATGATGTGTAT+GGG - chr6.4:1012790-1012809 MS.gene74405:intron 25.0%
! AACACAAATCAATTCACTAT+AGG - chr6.4:1012974-1012993 MS.gene74405:intron 25.0%
! ACACAAATCAATTCACTATA+GGG - chr6.4:1012975-1012994 MS.gene74405:intron 25.0%
! ATAAATGAGATAAACGTTCT+CGG - chr6.4:1013069-1013088 MS.gene74405:intron 25.0%
! ATGTCAACTTTCTAATCAAA+TGG - chr6.4:1012468-1012487 MS.gene74405:CDS 25.0%
! ATTTACAAATGGAAACTCAA+TGG + chr6.4:1013665-1013684 None:intergenic 25.0%
! GAATGTTAAGATAGTAATGA+GGG - chr6.4:1012068-1012087 MS.gene74405:intron 25.0%
! TAAACTCAACATGTTGAATA+AGG + chr6.4:1012830-1012849 None:intergenic 25.0%
! TAATTCTTCATTCTTCAGAT+AGG - chr6.4:1013952-1013971 MS.gene74405:CDS 25.0%
! TTCTGGATATGATTTACAAA+TGG + chr6.4:1013676-1013695 None:intergenic 25.0%
! TTTATCTTCCTGATAATCTT+CGG + chr6.4:1013054-1013073 None:intergenic 25.0%
!! AAGACTTTGTTAGTGTTTTT+AGG + chr6.4:1013734-1013753 None:intergenic 25.0%
!! TGAAAATGATCTAAAGTAAG+AGG + chr6.4:1012036-1012055 None:intergenic 25.0%
!!! ATGTTGTTTTTTCTTTGTTG+GGG - chr6.4:1013163-1013182 MS.gene74405:intron 25.0%
!!! ATTCTTTTTTGAAATGGAAG+GGG - chr6.4:1013190-1013209 MS.gene74405:intron 25.0%
!!! CTATGTTGTTTTTTCTTTGT+TGG - chr6.4:1013161-1013180 MS.gene74405:intron 25.0%
AACAAGACTAAACTTCTTCT+TGG + chr6.4:1013121-1013140 None:intergenic 30.0%
ACTCAACAATTTCCCTATAT+CGG + chr6.4:1013570-1013589 None:intergenic 30.0%
AGTTCATCAATCTATCAGAA+GGG - chr6.4:1013775-1013794 MS.gene74405:CDS 30.0%
AGTTGAAGAAAAGATGGAAA+TGG - chr6.4:1011987-1012006 MS.gene74405:CDS 30.0%
ATATAGGGAAATTGTTGAGT+TGG - chr6.4:1013570-1013589 MS.gene74405:CDS 30.0%
ATGGAAAAATTGAAGGTTGA+AGG - chr6.4:1012309-1012328 MS.gene74405:intron 30.0%
ATTCTTGTGCCTTAAATCAA+TGG + chr6.4:1013447-1013466 None:intergenic 30.0%
ATTTACAAAGAACCCGATAT+AGG - chr6.4:1013554-1013573 MS.gene74405:CDS 30.0%
CAAATGGAATATGATGTGTA+TGG - chr6.4:1012789-1012808 MS.gene74405:intron 30.0%
CGAATGTTAAGATAGTAATG+AGG - chr6.4:1012067-1012086 MS.gene74405:intron 30.0%
CTTAAATCAATGGACAATTC+CGG + chr6.4:1013437-1013456 None:intergenic 30.0%
GAAAGTTGACATCAAATCTT+TGG + chr6.4:1012460-1012479 None:intergenic 30.0%
GAACTAAAAGAAACACTGTT+AGG - chr6.4:1013884-1013903 MS.gene74405:CDS 30.0%
GATAGATTGATGAACTCTTT+AGG + chr6.4:1013771-1013790 None:intergenic 30.0%
GCTTAAAATTTACCTCACTT+AGG + chr6.4:1012538-1012557 None:intergenic 30.0%
GTTGAAGAAAAGATGGAAAT+GGG - chr6.4:1011988-1012007 MS.gene74405:CDS 30.0%
TAAATGAGATAAACGTTCTC+GGG - chr6.4:1013070-1013089 MS.gene74405:intron 30.0%
TGATGAAACTTTGCAGTTTA+AGG - chr6.4:1012897-1012916 MS.gene74405:intron 30.0%
TTAAATCAATGGACAATTCC+GGG + chr6.4:1013436-1013455 None:intergenic 30.0%
TTTACAAAGAACCCGATATA+GGG - chr6.4:1013555-1013574 MS.gene74405:CDS 30.0%
TTTCATCCTAGAAGAATTGT+TGG - chr6.4:1013305-1013324 MS.gene74405:intron 30.0%
! AACTCTTTAGGTAGTCTTAA+TGG + chr6.4:1013759-1013778 None:intergenic 30.0%
! ACAACATAGGATTTGATTTC+AGG - chr6.4:1013624-1013643 MS.gene74405:CDS 30.0%
! CATGTTGAGTTTATCTTTTG+TGG - chr6.4:1012837-1012856 MS.gene74405:intron 30.0%
! GTTTATCTTTTGTGGAGTTT+TGG - chr6.4:1012845-1012864 MS.gene74405:intron 30.0%
! TGGTTCTTGTTTATGATTTC+AGG - chr6.4:1013507-1013526 MS.gene74405:intron 30.0%
! TTGTTGTTGTTGAGAAACTT+CGG + chr6.4:1012214-1012233 None:intergenic 30.0%
!! TTTGTGGAGTTTTGGTATTT+TGG - chr6.4:1012853-1012872 MS.gene74405:intron 30.0%
!!! GTGTTTTTAGGTTCAAAACT+TGG + chr6.4:1013722-1013741 None:intergenic 30.0%
!!! TTTTTAGGTTCAAAACTTGG+TGG + chr6.4:1013719-1013738 None:intergenic 30.0%
AAAAATGGCCGAAGATTATC+AGG - chr6.4:1013043-1013062 MS.gene74405:intron 35.0%
AAACACTGTTAGGAACATCA+TGG - chr6.4:1013894-1013913 MS.gene74405:CDS 35.0%
AAGAATTCAGTTCAGTTGCT+GGG - chr6.4:1013461-1013480 MS.gene74405:intron 35.0%
AAGAGCTCATTTACTGTGAA+AGG + chr6.4:1013932-1013951 None:intergenic 35.0%
AAGTAAGAGGTTCATCACAT+AGG + chr6.4:1012023-1012042 None:intergenic 35.0%
AGCCATTATCATCTAATCAC+CGG - chr6.4:1012555-1012574 MS.gene74405:CDS 35.0%
AGTCAATGGATAGGAAATTC+TGG + chr6.4:1013693-1013712 None:intergenic 35.0%
AGTGATTCAGCTCATTTAGT+CGG - chr6.4:1012276-1012295 MS.gene74405:intron 35.0%
ATCACTCGACATTAACGAAT+CGG + chr6.4:1012262-1012281 None:intergenic 35.0%
ATTAACGAATCGGTGAGAAT+TGG + chr6.4:1012252-1012271 None:intergenic 35.0%
CAAACAAACACTTGACACTT+TGG + chr6.4:1012710-1012729 None:intergenic 35.0%
CGATAGCATGGAAAAATTGA+AGG - chr6.4:1012302-1012321 MS.gene74405:intron 35.0%
CTCAACAATTTCCCTATATC+GGG + chr6.4:1013569-1013588 None:intergenic 35.0%
GAAATGATATCAGGTGGTTT+GGG + chr6.4:1012596-1012615 None:intergenic 35.0%
GAGTTCATCAATCTATCAGA+AGG - chr6.4:1013774-1013793 MS.gene74405:CDS 35.0%
GTTCATCAATCTATCAGAAG+GGG - chr6.4:1013776-1013795 MS.gene74405:CDS 35.0%
TGAAATGATATCAGGTGGTT+TGG + chr6.4:1012597-1012616 None:intergenic 35.0%
TTAGGAACATCATGGAACAA+AGG - chr6.4:1013902-1013921 MS.gene74405:CDS 35.0%
! AATCTGCCATTTGATTAAGG+AGG + chr6.4:1012397-1012416 None:intergenic 35.0%
! ATCTTTTCACAGCTGCTATT+AGG + chr6.4:1013533-1013552 None:intergenic 35.0%
! CAAAGTGTCAAGTGTTTGTT+TGG - chr6.4:1012708-1012727 MS.gene74405:CDS 35.0%
! CCTAGAAGAATTGTTGGTTA+CGG - chr6.4:1013311-1013330 MS.gene74405:intron 35.0%
! GCAAATCTGCCATTTGATTA+AGG + chr6.4:1012400-1012419 None:intergenic 35.0%
! GGAAAACACACTCATTTTGT+GGG - chr6.4:1012874-1012893 MS.gene74405:intron 35.0%
! TGGAAAACACACTCATTTTG+TGG - chr6.4:1012873-1012892 MS.gene74405:intron 35.0%
! TTTGGAATGTTGATGTCAGT+AGG - chr6.4:1012726-1012745 MS.gene74405:CDS 35.0%
!! CGGAATTGTCCATTGATTTA+AGG - chr6.4:1013435-1013454 MS.gene74405:intron 35.0%
!! TCATTCTGAGACGGTAAAAA+TGG + chr6.4:1013605-1013624 None:intergenic 35.0%
ACAAGCAACAAACCAGGTTT+CGG + chr6.4:1013240-1013259 None:intergenic 40.0%
AGAAGCGAGGTGAAGATTTA+TGG + chr6.4:1012343-1012362 None:intergenic 40.0%
AGCCGGTGATTAGATGATAA+TGG + chr6.4:1012560-1012579 None:intergenic 40.0%
ATCTATCAGAAGGGGTTTCA+TGG - chr6.4:1013784-1013803 MS.gene74405:CDS 40.0%
CAACATCGTGAACTTTCTCT+TGG + chr6.4:1012191-1012210 None:intergenic 40.0%
CAAGAATTCAGTTCAGTTGC+TGG - chr6.4:1013460-1013479 MS.gene74405:intron 40.0%
CCGTAACCAACAATTCTTCT+AGG + chr6.4:1013314-1013333 None:intergenic 40.0%
CGTTTCTTCAAACAACTGGA+GGG + chr6.4:1012687-1012706 None:intergenic 40.0%
GAAGATGAAGTTCAAGCAGA+AGG - chr6.4:1012099-1012118 MS.gene74405:intron 40.0%
GAAGCGAGGTGAAGATTTAT+GGG + chr6.4:1012342-1012361 None:intergenic 40.0%
GACAGAGACAAATTGAGTGA+CGG + chr6.4:1012623-1012642 None:intergenic 40.0%
GATAGGCTTATGAAGCAAGT+TGG - chr6.4:1013969-1013988 MS.gene74405:CDS 40.0%
GCCATTTGATTAAGGAGGAA+GGG + chr6.4:1012392-1012411 None:intergenic 40.0%
GTCACTCAATTTGTCTCTGT+CGG - chr6.4:1012622-1012641 MS.gene74405:CDS 40.0%
GTTGCAGAGCAATTCTCAAT+CGG - chr6.4:1012427-1012446 MS.gene74405:CDS 40.0%
TCCCTTCCTCCTTAATCAAA+TGG - chr6.4:1012388-1012407 MS.gene74405:CDS 40.0%
TCTATCAGAAGGGGTTTCAT+GGG - chr6.4:1013785-1013804 MS.gene74405:CDS 40.0%
TGAACACGTTGAACAAGTGA+AGG - chr6.4:1013821-1013840 MS.gene74405:CDS 40.0%
TGTTCAACGTGTTCATGCTT+TGG + chr6.4:1013816-1013835 None:intergenic 40.0%
TTCTACATTCACAACCCGAT+TGG - chr6.4:1012359-1012378 MS.gene74405:CDS 40.0%
TTGGCGTTTCTTCAAACAAC+TGG + chr6.4:1012691-1012710 None:intergenic 40.0%
! AAACTTGGTGGTCTAGTCAA+TGG + chr6.4:1013707-1013726 None:intergenic 40.0%
! ACTTTCTCTTGGTGATTCTC+TGG + chr6.4:1012180-1012199 None:intergenic 40.0%
! CCTATGTTGTCATTCTGAGA+CGG + chr6.4:1013614-1013633 None:intergenic 40.0%
! GACGGTGTTGAAATGATATC+AGG + chr6.4:1012605-1012624 None:intergenic 40.0%
! GGTGTTGAAATGATATCAGG+TGG + chr6.4:1012602-1012621 None:intergenic 40.0%
! TGCCATTTGATTAAGGAGGA+AGG + chr6.4:1012393-1012412 None:intergenic 40.0%
! TTCTGTGTTGTTCGCTGAAA+AGG + chr6.4:1012148-1012167 None:intergenic 40.0%
ACACGTTGAACAAGTGAAGG+TGG - chr6.4:1013824-1013843 MS.gene74405:CDS 45.0%
ACAGTTTGATCGCAGAGAAC+TGG - chr6.4:1013265-1013284 MS.gene74405:CDS 45.0%
AGGAAGGGAGTTGAACCAAT+CGG + chr6.4:1012377-1012396 None:intergenic 45.0%
AGGTGGTGCATTTGATTCAG+AGG - chr6.4:1013841-1013860 MS.gene74405:CDS 45.0%
ATTCAGTTCAGTTGCTGGGT+AGG - chr6.4:1013465-1013484 MS.gene74405:intron 45.0%
CAATCTGCAACACCTAAGTG+AGG - chr6.4:1012523-1012542 MS.gene74405:CDS 45.0%
CAGTTTGATCGCAGAGAACT+GGG - chr6.4:1013266-1013285 MS.gene74405:CDS 45.0%
CATCGAACAATACCGAAACC+TGG - chr6.4:1013225-1013244 MS.gene74405:intron 45.0%
CCGTCTCAGAATGACAACAT+AGG - chr6.4:1013611-1013630 MS.gene74405:CDS 45.0%
GAATCGGTGAGAATTGGTGT+CGG + chr6.4:1012246-1012265 None:intergenic 45.0%
GCGTTTCTTCAAACAACTGG+AGG + chr6.4:1012688-1012707 None:intergenic 45.0%
GTGTGTTGAGAAAGATGAGC+TGG - chr6.4:1013487-1013506 MS.gene74405:intron 45.0%
TCTCTGCGATCAAACTGTCT+AGG + chr6.4:1013263-1013282 None:intergenic 45.0%
TGGTGGTCTAGTCAATGGAT+AGG + chr6.4:1013702-1013721 None:intergenic 45.0%
! ACTTAGGTGTTGCAGATTGG+AGG + chr6.4:1012522-1012541 None:intergenic 45.0%
! AGGTCGAGGCATTCTAATGA+AGG - chr6.4:1013395-1013414 MS.gene74405:intron 45.0%
! ATGATATCAGGTGGTTTGGG+TGG + chr6.4:1012593-1012612 None:intergenic 45.0%
! CTCACTTAGGTGTTGCAGAT+TGG + chr6.4:1012525-1012544 None:intergenic 45.0%
! CTTAGGTGTTGCAGATTGGA+GGG + chr6.4:1012521-1012540 None:intergenic 45.0%
! CTTGGTGATTCTCTGGTAGT+GGG + chr6.4:1012173-1012192 None:intergenic 45.0%
! GGTCGAGGCATTCTAATGAA+GGG - chr6.4:1013396-1013415 MS.gene74405:intron 45.0%
! TCTAGGACAAGCAACAAACC+AGG + chr6.4:1013246-1013265 None:intergenic 45.0%
! TCTTGGTGATTCTCTGGTAG+TGG + chr6.4:1012174-1012193 None:intergenic 45.0%
GAACCATCGCTGCAGTGAAA+AGG - chr6.4:1013375-1013394 MS.gene74405:intron 50.0%
GGAAGGGAGTTGAACCAATC+GGG + chr6.4:1012376-1012395 None:intergenic 50.0%
GGACAATTCCGGGAGAAACT+CGG + chr6.4:1013426-1013445 None:intergenic 50.0%
GGGTTGTGAATGTAGAAGCG+AGG + chr6.4:1012356-1012375 None:intergenic 50.0%
TTTAGTCGGCGACGATAGCA+TGG - chr6.4:1012290-1012309 MS.gene74405:intron 50.0%
! ATATCAGGTGGTTTGGGTGG+CGG + chr6.4:1012590-1012609 None:intergenic 50.0%
! CTGAAAAGGCACACTGTTGC+TGG + chr6.4:1012134-1012153 None:intergenic 50.0%
AGGGAAGACCGAGTTTCTCC+CGG - chr6.4:1013415-1013434 MS.gene74405:intron 55.0%
TCGCTGCAGTGAAAAGGTCG+AGG - chr6.4:1013381-1013400 MS.gene74405:intron 55.0%
! CGACCTTTTCACTGCAGCGA+TGG + chr6.4:1013381-1013400 None:intergenic 55.0%
! TGGGTGGCGGTGCAATCAGC+CGG + chr6.4:1012577-1012596 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr6.4 gene 1011982 1014016 1011982 ID=MS.gene74405
chr6.4 mRNA 1011982 1014016 1011982 ID=MS.gene74405.t1;Parent=MS.gene74405
chr6.4 exon 1013550 1014016 1013550 ID=MS.gene74405.t1.exon1;Parent=MS.gene74405.t1
chr6.4 CDS 1013550 1014016 1013550 ID=cds.MS.gene74405.t1;Parent=MS.gene74405.t1
chr6.4 exon 1013251 1013306 1013251 ID=MS.gene74405.t1.exon2;Parent=MS.gene74405.t1
chr6.4 CDS 1013251 1013306 1013251 ID=cds.MS.gene74405.t1;Parent=MS.gene74405.t1
chr6.4 exon 1012320 1012788 1012320 ID=MS.gene74405.t1.exon3;Parent=MS.gene74405.t1
chr6.4 CDS 1012320 1012788 1012320 ID=cds.MS.gene74405.t1;Parent=MS.gene74405.t1
chr6.4 exon 1012136 1012234 1012136 ID=MS.gene74405.t1.exon4;Parent=MS.gene74405.t1
chr6.4 CDS 1012136 1012234 1012136 ID=cds.MS.gene74405.t1;Parent=MS.gene74405.t1
chr6.4 exon 1011982 1012024 1011982 ID=MS.gene74405.t1.exon5;Parent=MS.gene74405.t1
chr6.4 CDS 1011982 1012024 1011982 ID=cds.MS.gene74405.t1;Parent=MS.gene74405.t1
Gene Sequence

>MS.gene74405

ATGGAAGTTGAAGAAAAGATGGAAATGGGTTTATGCTTCCTATGTGATGAACCTCTTACTTTAGATCATTTTCAGTTAAAGCATACGAATGTTAAGATAGTAATGAGGGATATTGATGAAGATGAAGTTCAAGCAGAAGGTGAAGATCTCCAGCAACAGTGTGCCTTTTCAGCGAACAACACAGAAATCCCACTACCAGAGAATCACCAAGAGAAAGTTCACGATGTTGCCGAAGTTTCTCAACAACAACAATCTTCTGTTCCGACACCAATTCTCACCGATTCGTTAATGTCGAGTGATTCAGCTCATTTAGTCGGCGACGATAGCATGGAAAAATTGAAGGTTGAAGGAATTTTACCCATAAATCTTCACCTCGCTTCTACATTCACAACCCGATTGGTTCAACTCCCTTCCTCCTTAATCAAATGGCAGATTTGCGTGATGAGTTGCAGAGCAATTCTCAATCGGTGCAGAACCAAAGATTTGATGTCAACTTTCTAATCAAATGGAGCACATCTTTGCAAAATCGTTTTTCGCCCTCCAATCTGCAACACCTAAGTGAGGTAAATTTTAAGCCATTATCATCTAATCACCGGCTGATTGCACCGCCACCCAAACCACCTGATATCATTTCAACACCGTCACTCAATTTGTCTCTGTCGGTTACATCAGAAATGTATTCATTTTTTATGTCGCTATCTGCCCTCCAGTTGTTTGAAGAAACGCCAAAGTGTCAAGTGTTTGTTTGGAATGTTGATGTCAGTAGGTACACTAATACTGAGCCTGAATTTGTTGATTGTTATTTATCAAATGGAATATGATGTGTATGGGTTCTTGTAACTACACCTTATTCAACATGTTGAGTTTATCTTTTGTGGAGTTTTGGTATTTTGGAAAACACACTCATTTTGTGGGTGATGAAACTTTGCAGTTTAAGGTTTTTGAATCTTCGCTTTTGTTTTTTGAAAATTCAAAGGAAATTCATGTGCTCAAACACAAATCAATTCACTATAGGGATCTCATATCTTACACAAAGATATTTCAAGATTTGATTACATCGAAAAAATGGCCGAAGATTATCAGGAAGATAAATGAGATAAACGTTCTCGGGTCTCGTTCATCTTTTTCGTCTTCTGCCAAGAAGAAGTTTAGTCTTGTTGCTACTGTTCATGCTGCTTTCTATGTTGTTTTTTCTTTGTTGGGGTATTATTCTTTTTTGAAATGGAAGGGGATGAGAAAGTGTCATCGAACAATACCGAAACCTGGTTTGTTGCTTGTCCTAGACAGTTTGATCGCAGAGAACTGGGATCTACAACAAGAGAGTTTCATCCTAGAAGAATTGTTGGTTACGGTTCATTTTGTACTGTGTATAAAGCTTTCTCTATATTTTTTAGAACCATCGCTGCAGTGAAAAGGTCGAGGCATTCTAATGAAGGGAAGACCGAGTTTCTCCCGGAATTGTCCATTGATTTAAGGCACAAGAATTCAGTTCAGTTGCTGGGTAGGTGTGTTGAGAAAGATGAGCTGGTTCTTGTTTATGATTTCAGGCCTAATAGCAGCTGTGAAAAGATGATTTACAAAGAACCCGATATAGGGAAATTGTTGAGTTGGTCTCAGTATCCATTTTTACCGTCTCAGAATGACAACATAGGATTTGATTTCAGGAATATCAATGAGAATCCATTGAGTTTCCATTTGTAAATCATATCCAGAATTTCCTATCCATTGACTAGACCACCAAGTTTTGAACCTAAAAACACTAACAAAGTCTTTTCCATTAAGACTACCTAAAGAGTTCATCAATCTATCAGAAGGGGTTTCATGGGAGAATCCAAAGCATGAACACGTTGAACAAGTGAAGGTGGTGCATTTGATTCAGAGGTTTTGCATATAGCAGAGAAAGAACTAAAAGAAACACTGTTAGGAACATCATGGAACAAAGGAACACCTTTCACAGTAAATGAGCTCTTTAATTCTTCATTCTTCAGATAGGCTTATGAAGCAAGTTGGCTTATGCTATGAGTTTACTGAGTAG
Protein sequence

>MS.gene74405.t1

MEVEEKMEMGLCFLCDEPLTLDHFQLKHTNVKIVMRDIDEDEVQAEGEDLQQQCAFSANNTEIPLPENHQEKVHDVAEVSQQQQSSVPTPILTDSLMSSDSAHLVGDDSMEKLKVEGILPINLHLASTFTTRLVQLPSSLIKWQICVMSCRAILNRCLKKRQSVKCLFGMLMSVGDEKVSSNNTETWFVACPRQFDRRELGSTTREFHPRRIVGYGSFCTVYKAFSIFFRTIAAVKRSRHSNEGKTEFLPELSIDLRHKNSVQLLGRCVEKDELVLVYDFRPNSSCEKMIYKEPDIGKLLSWSQYPFLPSQNDNIGFDFRNINENPLSFHLLPKEFINLSEGVSWENPKHEHVEQVKVVHLIQRLMKQVGLCYEFTE