Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74489.t1 | XP_003611877.2 | 95.6 | 527 | 21 | 1 | 1 | 527 | 1 | 525 | 5.40E-267 | 929.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74489.t1 | Q8W4F0 | 67.1 | 559 | 145 | 4 | 1 | 526 | 1 | 553 | 7.7e-190 | 664.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74489.t1 | G7KAS2 | 95.6 | 527 | 21 | 1 | 1 | 527 | 1 | 525 | 3.9e-267 | 929.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene74489.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74489.t1 | MTR_5g018900 | 97.343 | 527 | 12 | 1 | 1 | 527 | 1 | 525 | 0.0 | 1065 |
| MS.gene74489.t1 | MTR_8g078410 | 75.376 | 532 | 124 | 5 | 1 | 526 | 1 | 531 | 0.0 | 773 |
| MS.gene74489.t1 | MTR_1g021835 | 58.935 | 526 | 158 | 6 | 1 | 526 | 1 | 468 | 0.0 | 607 |
| MS.gene74489.t1 | MTR_5g081160 | 50.947 | 528 | 201 | 6 | 1 | 526 | 32 | 503 | 1.55e-178 | 512 |
| MS.gene74489.t1 | MTR_1g021835 | 57.692 | 416 | 125 | 5 | 1 | 416 | 1 | 365 | 1.50e-169 | 486 |
| MS.gene74489.t1 | MTR_3g069410 | 56.954 | 453 | 164 | 6 | 101 | 526 | 64 | 512 | 4.03e-169 | 488 |
| MS.gene74489.t1 | MTR_1g021835 | 55.775 | 355 | 110 | 3 | 1 | 355 | 1 | 308 | 2.46e-138 | 402 |
| MS.gene74489.t1 | MTR_5g018910 | 76.404 | 89 | 20 | 1 | 156 | 244 | 496 | 583 | 1.33e-41 | 158 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74489.t1 | AT4G36860 | 66.905 | 559 | 146 | 6 | 1 | 526 | 1 | 553 | 0.0 | 715 |
| MS.gene74489.t1 | AT4G36860 | 64.605 | 582 | 145 | 7 | 1 | 526 | 1 | 577 | 0.0 | 709 |
| MS.gene74489.t1 | AT1G19270 | 52.055 | 584 | 169 | 8 | 1 | 526 | 1 | 531 | 0.0 | 583 |
| MS.gene74489.t1 | AT1G19270 | 52.055 | 584 | 169 | 8 | 1 | 526 | 1 | 531 | 0.0 | 583 |
| MS.gene74489.t1 | AT4G36860 | 64.811 | 449 | 124 | 5 | 1 | 416 | 1 | 448 | 0.0 | 570 |
| MS.gene74489.t1 | AT2G39830 | 57.718 | 447 | 164 | 5 | 102 | 526 | 75 | 518 | 0.0 | 518 |
| MS.gene74489.t1 | AT2G39830 | 56.484 | 455 | 172 | 6 | 94 | 526 | 77 | 527 | 3.12e-180 | 517 |
| MS.gene74489.t1 | AT2G39830 | 56.114 | 458 | 172 | 7 | 94 | 526 | 77 | 530 | 7.74e-178 | 511 |
| MS.gene74489.t1 | AT2G39830 | 53.591 | 362 | 143 | 6 | 94 | 432 | 77 | 436 | 2.05e-135 | 400 |
| MS.gene74489.t1 | AT5G66620 | 46.667 | 480 | 229 | 9 | 47 | 519 | 181 | 640 | 9.98e-135 | 405 |
| MS.gene74489.t1 | AT5G66620 | 46.667 | 480 | 229 | 9 | 47 | 519 | 172 | 631 | 1.13e-134 | 404 |
| MS.gene74489.t1 | AT5G66620 | 46.667 | 480 | 229 | 9 | 47 | 519 | 172 | 631 | 1.13e-134 | 404 |
| MS.gene74489.t1 | AT5G66610 | 45.759 | 507 | 221 | 10 | 45 | 520 | 68 | 551 | 5.54e-129 | 387 |
| MS.gene74489.t1 | AT5G66610 | 46.171 | 457 | 204 | 8 | 66 | 520 | 8 | 424 | 3.78e-126 | 376 |
| MS.gene74489.t1 | AT5G66610 | 42.884 | 534 | 224 | 11 | 45 | 520 | 68 | 578 | 3.80e-123 | 373 |
| MS.gene74489.t1 | AT5G66630 | 48.533 | 375 | 176 | 7 | 148 | 519 | 338 | 698 | 1.82e-111 | 347 |
| MS.gene74489.t1 | AT5G66640 | 43.656 | 465 | 228 | 14 | 71 | 519 | 24 | 470 | 2.53e-107 | 329 |
| MS.gene74489.t1 | AT5G66640 | 43.929 | 453 | 221 | 13 | 81 | 519 | 5 | 438 | 8.69e-107 | 327 |
| MS.gene74489.t1 | AT5G66640 | 43.929 | 453 | 221 | 13 | 81 | 519 | 5 | 438 | 8.69e-107 | 327 |
| MS.gene74489.t1 | AT5G66640 | 43.441 | 465 | 228 | 14 | 71 | 519 | 24 | 469 | 1.33e-106 | 327 |
| MS.gene74489.t1 | AT5G17890 | 50.806 | 372 | 173 | 5 | 153 | 519 | 1235 | 1601 | 2.50e-104 | 343 |
| MS.gene74489.t1 | AT5G66640 | 50.155 | 323 | 152 | 6 | 205 | 519 | 10 | 331 | 2.09e-100 | 306 |
| MS.gene74489.t1 | AT5G66640 | 40.215 | 465 | 240 | 15 | 71 | 519 | 24 | 466 | 5.44e-91 | 287 |
| MS.gene74489.t1 | AT5G66640 | 40.000 | 465 | 240 | 15 | 71 | 519 | 24 | 465 | 2.96e-90 | 285 |
| MS.gene74489.t1 | AT5G66620 | 41.399 | 343 | 174 | 9 | 47 | 382 | 172 | 494 | 2.14e-77 | 252 |
Find 129 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATTCCTTCTTCAATTTC+TGG | 0.060868 | 5.2:-10600949 | None:intergenic |
| AGTATAGAGCTCATCCTTTC+TGG | 0.166643 | 5.2:+10599895 | MS.gene74489:CDS |
| AACATGGTGATGATAGAATT+TGG | 0.189733 | 5.2:+10597090 | MS.gene74489:CDS |
| GGCTCTAATCATAGAATTTC+AGG | 0.190682 | 5.2:+10597050 | MS.gene74489:CDS |
| TCTCCCTGTAGCAGGATTTA+TGG | 0.233835 | 5.2:-10598895 | None:intergenic |
| CATGCATGGCTCAGGCTTAA+AGG | 0.237169 | 5.2:+10600816 | MS.gene74489:CDS |
| GTCTTCCTCAAGTTGATCTT+TGG | 0.266836 | 5.2:-10597782 | None:intergenic |
| GCAGCAAGTTCCTATGCTTT+TGG | 0.277916 | 5.2:+10600232 | MS.gene74489:CDS |
| CATCGACGGGTCAGTCTATA+AGG | 0.282747 | 5.2:-10600634 | None:intergenic |
| GTGTCTAGACTCAGCAATTA+TGG | 0.285275 | 5.2:+10600139 | MS.gene74489:CDS |
| CATAAAATTCTAGTATTTCA+TGG | 0.285949 | 5.2:-10600187 | None:intergenic |
| GTCCTCTAGTTTCAGGTAAA+TGG | 0.286014 | 5.2:-10600418 | None:intergenic |
| CGGTGTCCTGCCCCTATACT+TGG | 0.286586 | 5.2:-10600589 | None:intergenic |
| TACCAGGCGGTACTTAAGTA+TGG | 0.294982 | 5.2:+10601195 | MS.gene74489:CDS |
| ACCTCTTTCCACCAGGATTC+AGG | 0.345128 | 5.2:+10597893 | MS.gene74489:CDS |
| TTAGAATCAGAGCTCTATTC+TGG | 0.345608 | 5.2:+10600994 | MS.gene74489:CDS |
| TGCTGTCGAGCTCATGCGTT+GGG | 0.363900 | 5.2:-10599932 | None:intergenic |
| TCAGAGCTCTATTCTGGATC+TGG | 0.372505 | 5.2:+10601000 | MS.gene74489:CDS |
| AAGCAGAGTCCTCTAGTTTC+AGG | 0.382892 | 5.2:-10600425 | None:intergenic |
| TAAGTTGCATGGGAGGGGTC+TGG | 0.385209 | 5.2:+10598622 | MS.gene74489:CDS |
| TCAATTTCTGGCCTCAAGTT+GGG | 0.412121 | 5.2:-10600937 | None:intergenic |
| TTCTTGCAAACATCACATCT+TGG | 0.412310 | 5.2:-10598926 | None:intergenic |
| CTTTCAACATGGAAAAGTTC+CGG | 0.413229 | 5.2:-10601250 | None:intergenic |
| TTCAATTTCTGGCCTCAAGT+TGG | 0.417922 | 5.2:-10600938 | None:intergenic |
| ATGGAAAAGTTCCGGTCAAA+TGG | 0.421969 | 5.2:-10601242 | None:intergenic |
| ACATGGTGATGATAGAATTT+GGG | 0.426199 | 5.2:+10597091 | MS.gene74489:CDS |
| CTGAGTGCAGGATGATTTGC+CGG | 0.446222 | 5.2:+10597248 | MS.gene74489:intron |
| TCTTGCAAACATCACATCTT+GGG | 0.448902 | 5.2:-10598925 | None:intergenic |
| GTGATGCTTCTCCCTGTAGC+AGG | 0.451634 | 5.2:-10598903 | None:intergenic |
| TGAAGGTTTAAATATGAAAG+TGG | 0.460205 | 5.2:+10600208 | MS.gene74489:CDS |
| CTAACCTCATAATCAGTGAT+TGG | 0.460726 | 5.2:-10598681 | None:intergenic |
| CGGTCAAATGGATATGATCA+AGG | 0.464591 | 5.2:-10601230 | None:intergenic |
| GGCTGTCACTTCGCATCGAC+GGG | 0.470821 | 5.2:-10600647 | None:intergenic |
| TCTGCCAATCACTGATTATG+AGG | 0.478761 | 5.2:+10598677 | MS.gene74489:CDS |
| TATGTTTATAGATTGTTGAC+AGG | 0.479289 | 5.2:+10600768 | MS.gene74489:intron |
| TTTCTCTGCAGAATCTGTGC+TGG | 0.480650 | 5.2:+10598567 | MS.gene74489:intron |
| TGGTTTACAAAGTTTCTCAA+TGG | 0.483060 | 5.2:+10597029 | MS.gene74489:CDS |
| GCAGATGGCAAGCATGGCAT+TGG | 0.483972 | 5.2:-10598659 | None:intergenic |
| GTGAGGTATCTGACTCAATC+TGG | 0.485020 | 5.2:-10601143 | None:intergenic |
| GCTGGATGCAATGCTGAGAT+TGG | 0.485337 | 5.2:+10598585 | MS.gene74489:CDS |
| TTGTTGTAGCTGCGAAAGAA+TGG | 0.486878 | 5.2:+10599962 | MS.gene74489:CDS |
| GTATTTCATGGTAGAGAGGT+TGG | 0.496331 | 5.2:-10600175 | None:intergenic |
| TCAGATACCTCACCAGCCTA+TGG | 0.497390 | 5.2:+10601153 | MS.gene74489:CDS |
| ATGAGGCCAGCTGAATTAGC+CGG | 0.498369 | 5.2:-10599870 | None:intergenic |
| AGATAATGCATGCATGGCTC+AGG | 0.501774 | 5.2:+10600808 | MS.gene74489:CDS |
| GTGTTCTGCATCATCGAAGA+AGG | 0.503016 | 5.2:+10601074 | MS.gene74489:CDS |
| CAGAGCTCTATTCTGGATCT+GGG | 0.507459 | 5.2:+10601001 | MS.gene74489:CDS |
| TCTCCCCACCTCTTTCCACC+AGG | 0.509167 | 5.2:+10597886 | MS.gene74489:CDS |
| CTTGATCATATCCATTTGAC+CGG | 0.509477 | 5.2:+10601231 | MS.gene74489:CDS |
| CTGAAAGGGAAGAAAGTTGT+TGG | 0.513320 | 5.2:+10597327 | MS.gene74489:CDS |
| ATATATAATTACCTGAATCC+TGG | 0.513713 | 5.2:-10597904 | None:intergenic |
| TGGATTCAGATCGGGTTACC+AGG | 0.515296 | 5.2:+10601179 | MS.gene74489:CDS |
| ATTCAATTAAGTTTGAGCAC+TGG | 0.516076 | 5.2:+10597823 | MS.gene74489:CDS |
| CTTACCATAAATCCTGCTAC+AGG | 0.517147 | 5.2:+10598891 | MS.gene74489:CDS |
| CAGATCCCGGCTAATTCAGC+TGG | 0.521586 | 5.2:+10599864 | MS.gene74489:intron |
| CTGTAGCAGGATTTATGGTA+AGG | 0.522745 | 5.2:-10598890 | None:intergenic |
| GGTGGAAAGAGGTGGGGAGA+AGG | 0.524431 | 5.2:-10597883 | None:intergenic |
| GCACTAAATGAGGCCATTGA+GGG | 0.528915 | 5.2:+10600266 | MS.gene74489:CDS |
| GTGCTGTCGAGCTCATGCGT+TGG | 0.530772 | 5.2:-10599933 | None:intergenic |
| TATGGAGATGGATTCAGATC+GGG | 0.531474 | 5.2:+10601171 | MS.gene74489:CDS |
| ACCTCACCAGCCTATGGAGA+TGG | 0.534287 | 5.2:+10601159 | MS.gene74489:CDS |
| CCTCAAGTTGATCTTTGGCA+CGG | 0.534386 | 5.2:-10597777 | None:intergenic |
| CTGAATCCATCTCCATAGGC+TGG | 0.535577 | 5.2:-10601165 | None:intergenic |
| GACGAGGAAGATGAGAATGT+TGG | 0.536005 | 5.2:+10597694 | MS.gene74489:CDS |
| ACCTGAATCCTGGTGGAAAG+AGG | 0.537281 | 5.2:-10597894 | None:intergenic |
| CGATCTGAATCCATCTCCAT+AGG | 0.537412 | 5.2:-10601169 | None:intergenic |
| TGGCTGTCACTTCGCATCGA+CGG | 0.539258 | 5.2:-10600648 | None:intergenic |
| CTCATGAGATAATGCATGCA+TGG | 0.539682 | 5.2:+10600802 | MS.gene74489:CDS |
| CCTTCTAGCTAAAATTCAGC+AGG | 0.540630 | 5.2:+10597741 | MS.gene74489:CDS |
| AGCACTAAATGAGGCCATTG+AGG | 0.541852 | 5.2:+10600265 | MS.gene74489:CDS |
| TATCAGAGGAGGATCTGAAA+GGG | 0.551935 | 5.2:+10597313 | MS.gene74489:CDS |
| TGTTATATGGTTACCTAGGA+AGG | 0.552829 | 5.2:-10600687 | None:intergenic |
| GAATCCTGGTGGAAAGAGGT+GGG | 0.554764 | 5.2:-10597890 | None:intergenic |
| CATGCATTATCTCATGAGCT+AGG | 0.555420 | 5.2:-10600797 | None:intergenic |
| CTATCAGAGGAGGATCTGAA+AGG | 0.555665 | 5.2:+10597312 | MS.gene74489:CDS |
| AGAAAACCAAGTATAGGGGC+AGG | 0.561310 | 5.2:+10600583 | MS.gene74489:CDS |
| TGAGGCCAGCTGAATTAGCC+GGG | 0.562601 | 5.2:-10599869 | None:intergenic |
| TTGAGGCCAGAAATTGAAGA+AGG | 0.563599 | 5.2:+10600943 | MS.gene74489:CDS |
| TGATTGGCAGATGGCAAGCA+TGG | 0.564914 | 5.2:-10598665 | None:intergenic |
| GGGCAATACAATGGCAAACA+TGG | 0.564946 | 5.2:+10597074 | MS.gene74489:CDS |
| ACGGGTCAGTCTATAAGGCT+TGG | 0.569106 | 5.2:-10600629 | None:intergenic |
| TTTAAGAAAACCAAGTATAG+GGG | 0.569581 | 5.2:+10600579 | MS.gene74489:CDS |
| GTAAGGACGGTTGCTAGACA+TGG | 0.570040 | 5.2:-10598873 | None:intergenic |
| TGAATCCTGGTGGAAAGAGG+TGG | 0.571390 | 5.2:-10597891 | None:intergenic |
| GCCCATACTTAAGTACCGCC+TGG | 0.571618 | 5.2:-10601197 | None:intergenic |
| AGGAAGACGAGCAACTTGCA+AGG | 0.572451 | 5.2:+10597797 | MS.gene74489:CDS |
| AGGAATTCCTACGGTGGTGA+CGG | 0.573043 | 5.2:-10600462 | None:intergenic |
| TCTAGTATTTCATGGTAGAG+AGG | 0.573281 | 5.2:-10600179 | None:intergenic |
| CTATGGAGATGGATTCAGAT+CGG | 0.581389 | 5.2:+10601170 | MS.gene74489:CDS |
| TGCAATGCTGAGATTGGCCA+TGG | 0.581581 | 5.2:+10598591 | MS.gene74489:CDS |
| TGTCTTTCCACCAAAAGCAT+AGG | 0.584605 | 5.2:-10600242 | None:intergenic |
| ACCAGGCGGTACTTAAGTAT+GGG | 0.585146 | 5.2:+10601196 | MS.gene74489:CDS |
| TTATAGGTTATCCCAACTTG+AGG | 0.585861 | 5.2:+10600926 | MS.gene74489:intron |
| TGGTTATCATGTCTGTGACT+CGG | 0.588138 | 5.2:-10600609 | None:intergenic |
| AGAAGGAATCTGTCAAGTGT+TGG | 0.595703 | 5.2:+10600960 | MS.gene74489:CDS |
| GGAAAGACAAGCACTAAATG+AGG | 0.596661 | 5.2:+10600256 | MS.gene74489:CDS |
| AAGGCCATACAAAACAAGAA+TGG | 0.597233 | 5.2:-10600668 | None:intergenic |
| GGAAGACGAGCAACTTGCAA+GGG | 0.598064 | 5.2:+10597798 | MS.gene74489:CDS |
| AGCAGGATTTATGGTAAGGA+CGG | 0.599912 | 5.2:-10598886 | None:intergenic |
| TCCATCTCCATAGGCTGGTG+AGG | 0.600925 | 5.2:-10601160 | None:intergenic |
| CATAATCAGTGATTGGCAGA+TGG | 0.606004 | 5.2:-10598674 | None:intergenic |
| GTCAAGTGTTGGCTCATATG+TGG | 0.608811 | 5.2:+10600971 | MS.gene74489:CDS |
| GGTCAAATGGATATGATCAA+GGG | 0.611026 | 5.2:-10601229 | None:intergenic |
| TGCACTCTCTCTATCAGAGG+AGG | 0.611907 | 5.2:+10597302 | MS.gene74489:CDS |
| ACTGGTTCTCCTCCTCGACA+TGG | 0.617399 | 5.2:+10597841 | MS.gene74489:CDS |
| TTCTTCGATGATGCAGAACA+CGG | 0.620817 | 5.2:-10601072 | None:intergenic |
| TATAATTACCTGAATCCTGG+TGG | 0.627643 | 5.2:-10597901 | None:intergenic |
| AATCCTGGTGGAAAGAGGTG+GGG | 0.630175 | 5.2:-10597889 | None:intergenic |
| TAGCTTTCAAACTTTCAACA+TGG | 0.634802 | 5.2:-10601261 | None:intergenic |
| AGAGAATCTTTGCCATGTCG+AGG | 0.635073 | 5.2:-10597853 | None:intergenic |
| GATGAGCTCTATACTCAATG+AGG | 0.636611 | 5.2:-10599887 | None:intergenic |
| ATTTCAGGAGGGCAATACAA+TGG | 0.636955 | 5.2:+10597065 | MS.gene74489:CDS |
| TTACCATAAATCCTGCTACA+GGG | 0.641135 | 5.2:+10598892 | MS.gene74489:CDS |
| GGATAATCATCATAGTTCAG+TGG | 0.641892 | 5.2:+10597112 | MS.gene74489:CDS |
| GCATGGCATTGGAAGCATTG+TGG | 0.647853 | 5.2:-10598648 | None:intergenic |
| GATGAAGACGAAGACGAAGG+CGG | 0.650656 | 5.2:-10601036 | None:intergenic |
| CACCATTTACCTGAAACTAG+AGG | 0.653687 | 5.2:+10600416 | MS.gene74489:CDS |
| AATTGCACTCTCTCTATCAG+AGG | 0.658444 | 5.2:+10597299 | MS.gene74489:CDS |
| TGTTCTGCATCATCGAAGAA+GGG | 0.659899 | 5.2:+10601075 | MS.gene74489:CDS |
| TCTAATCATAGAATTTCAGG+AGG | 0.660809 | 5.2:+10597053 | MS.gene74489:CDS |
| GAATCTTTGCCATGTCGAGG+AGG | 0.671664 | 5.2:-10597850 | None:intergenic |
| TTGTAGCTGCGAAAGAATGG+AGG | 0.672189 | 5.2:+10599965 | MS.gene74489:CDS |
| GATGATGAAGACGAAGACGA+AGG | 0.677210 | 5.2:-10601039 | None:intergenic |
| CCGTGCCAAAGATCAACTTG+AGG | 0.706058 | 5.2:+10597777 | MS.gene74489:CDS |
| ACAACTTTGTAAAATTGACG+AGG | 0.708039 | 5.2:+10597678 | MS.gene74489:CDS |
| CTAATCATAGAATTTCAGGA+GGG | 0.718623 | 5.2:+10597054 | MS.gene74489:CDS |
| CTTTCGCAGCTACAACAACG+AGG | 0.721804 | 5.2:-10599957 | None:intergenic |
| TTCGATGATGCAGAACACGG+CGG | 0.732822 | 5.2:-10601069 | None:intergenic |
| ATTCAGATCGGGTTACCAGG+CGG | 0.751020 | 5.2:+10601182 | MS.gene74489:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTACTTAATAAGTTAT+AGG | - | chr5.2:10599566-10599585 | None:intergenic | 10.0% |
| !!! | AAGTAAATAATTCAATTTTT+AGG | - | chr5.2:10598458-10598477 | None:intergenic | 10.0% |
| !!! | TTTGAATCATTTTATATAAT+CGG | + | chr5.2:10598199-10598218 | MS.gene74489:intron | 10.0% |
| !!! | TTTTTTTTTATACTAACATA+TGG | + | chr5.2:10598405-10598424 | MS.gene74489:intron | 10.0% |
| !! | AAGATTTGTGAATTATATAA+CGG | + | chr5.2:10600529-10600548 | MS.gene74489:intron | 15.0% |
| !! | ACAATTATTAGATTTCAAAT+AGG | - | chr5.2:10599434-10599453 | None:intergenic | 15.0% |
| !! | TTAATGTGTATAAGAAATAT+GGG | + | chr5.2:10597423-10597442 | MS.gene74489:intron | 15.0% |
| !! | TTATGAAGATTATATCTATA+TGG | - | chr5.2:10598364-10598383 | None:intergenic | 15.0% |
| !! | TTTCAATTTCTTATTAATGA+AGG | - | chr5.2:10597151-10597170 | None:intergenic | 15.0% |
| !!! | GATTTTCATAAAAAAGTATT+TGG | - | chr5.2:10597959-10597978 | None:intergenic | 15.0% |
| !!! | TACTTAGATTTTATTAACTA+AGG | - | chr5.2:10598313-10598332 | None:intergenic | 15.0% |
| !!! | TATTAAGTATTTCTGAATTA+TGG | + | chr5.2:10598074-10598093 | MS.gene74489:intron | 15.0% |
| !!! | TTGAATCATTTTATATAATC+GGG | + | chr5.2:10598200-10598219 | MS.gene74489:intron | 15.0% |
| !! | AAAAAAATCGTGAGATATAA+CGG | - | chr5.2:10598392-10598411 | None:intergenic | 20.0% |
| !! | ATAGTTTGAATATGTAATTG+TGG | + | chr5.2:10597221-10597240 | MS.gene74489:intron | 20.0% |
| !! | CATAAAATTCTAGTATTTCA+TGG | - | chr5.2:10600190-10600209 | None:intergenic | 20.0% |
| !! | CATAAATTAGAATAGATACT+AGG | - | chr5.2:10600046-10600065 | None:intergenic | 20.0% |
| !! | CTAGTATCTATTCTAATTTA+TGG | + | chr5.2:10600044-10600063 | MS.gene74489:intron | 20.0% |
| !! | GTTAATGTGTATAAGAAATA+TGG | + | chr5.2:10597422-10597441 | MS.gene74489:intron | 20.0% |
| !! | GTTGTTCATTTGTTTAAATA+TGG | - | chr5.2:10598529-10598548 | None:intergenic | 20.0% |
| !! | TAATGTGTATAAGAAATATG+GGG | + | chr5.2:10597424-10597443 | MS.gene74489:intron | 20.0% |
| !! | TCAATACGATATGAATAATA+CGG | + | chr5.2:10598824-10598843 | MS.gene74489:intron | 20.0% |
| !! | TTAAAACATTAATAGCAACT+GGG | + | chr5.2:10599721-10599740 | MS.gene74489:intron | 20.0% |
| !!! | AAAAGATATTTTGAATCCTT+TGG | - | chr5.2:10600089-10600108 | None:intergenic | 20.0% |
| !!! | AAATATCTTTTTCTTGATGA+TGG | + | chr5.2:10600098-10600117 | MS.gene74489:CDS | 20.0% |
| !!! | ATTTTAAGAAAACCAAGTAT+AGG | + | chr5.2:10600577-10600596 | MS.gene74489:CDS | 20.0% |
| !!! | GAAATACTAGAATTTTATGA+AGG | + | chr5.2:10600191-10600210 | MS.gene74489:CDS | 20.0% |
| !!! | TTTTAAGAAAACCAAGTATA+GGG | + | chr5.2:10600578-10600597 | MS.gene74489:CDS | 20.0% |
| !!! | TTTTACTTATACTTTGGTAT+GGG | - | chr5.2:10597598-10597617 | None:intergenic | 20.0% |
| ! | AAAGTAACAACTCTTAAGTT+AGG | - | chr5.2:10600371-10600390 | None:intergenic | 25.0% |
| ! | ATAACTATGACTGAAATTTG+AGG | - | chr5.2:10599503-10599522 | None:intergenic | 25.0% |
| ! | ATATATAATTACCTGAATCC+TGG | - | chr5.2:10597907-10597926 | None:intergenic | 25.0% |
| ! | ATCCATGAACATATGAAAAT+AGG | - | chr5.2:10598498-10598517 | None:intergenic | 25.0% |
| ! | ATTATGAGATAAAGAACATG+AGG | - | chr5.2:10597623-10597642 | None:intergenic | 25.0% |
| ! | CATACCAAAGTATAAGTAAA+AGG | + | chr5.2:10597597-10597616 | MS.gene74489:intron | 25.0% |
| ! | CTTTCACTGTATATAATTCA+AGG | + | chr5.2:10600741-10600760 | MS.gene74489:intron | 25.0% |
| ! | GTTAAAACATTAATAGCAAC+TGG | + | chr5.2:10599720-10599739 | MS.gene74489:intron | 25.0% |
| ! | GTTTATCATGTTTCATATCA+TGG | - | chr5.2:10598256-10598275 | None:intergenic | 25.0% |
| ! | GTTTCATAACATATTCTGTT+TGG | - | chr5.2:10598048-10598067 | None:intergenic | 25.0% |
| ! | TAAAACATTAATAGCAACTG+GGG | + | chr5.2:10599722-10599741 | MS.gene74489:intron | 25.0% |
| ! | TAGTTGTTCATTTCAATAAC+TGG | + | chr5.2:10599337-10599356 | MS.gene74489:intron | 25.0% |
| ! | TATCATATGCTTGAAATATG+AGG | + | chr5.2:10599526-10599545 | MS.gene74489:intron | 25.0% |
| ! | TATGTTTATAGATTGTTGAC+AGG | + | chr5.2:10600768-10600787 | MS.gene74489:intron | 25.0% |
| ! | TCAGAAATACTTAATAACTG+AGG | - | chr5.2:10598070-10598089 | None:intergenic | 25.0% |
| ! | TGAAGGTTTAAATATGAAAG+TGG | + | chr5.2:10600208-10600227 | MS.gene74489:CDS | 25.0% |
| ! | TGTTTCCTAATTAGTAACAA+CGG | - | chr5.2:10600010-10600029 | None:intergenic | 25.0% |
| ! | TTTAAGAAAACCAAGTATAG+GGG | + | chr5.2:10600579-10600598 | MS.gene74489:CDS | 25.0% |
| !! | AAAAAGTGTAAAGGAAAACA+AGG | - | chr5.2:10598155-10598174 | None:intergenic | 25.0% |
| !! | AAAAGTGTAAAGGAAAACAA+GGG | - | chr5.2:10598154-10598173 | None:intergenic | 25.0% |
| !! | ATCCTATTTTCATATGTTCA+TGG | + | chr5.2:10598493-10598512 | MS.gene74489:intron | 25.0% |
| !! | CTTTTACTTATACTTTGGTA+TGG | - | chr5.2:10597599-10597618 | None:intergenic | 25.0% |
| !! | TAAGAAATATGGGGATATTT+TGG | + | chr5.2:10597433-10597452 | MS.gene74489:intron | 25.0% |
| !!! | TACAATTTTTCTGAGACTTA+AGG | + | chr5.2:10597194-10597213 | MS.gene74489:intron | 25.0% |
| !!! | TACTTGGTTTTCTTAAAATC+TGG | - | chr5.2:10600576-10600595 | None:intergenic | 25.0% |
| !!! | TTCTGTTTGGCAATATTTTT+TGG | - | chr5.2:10598035-10598054 | None:intergenic | 25.0% |
| AAACAAATGAACAACATACC+TGG | + | chr5.2:10598534-10598553 | MS.gene74489:intron | 30.0% | |
| AAAGTGTAAAGGAAAACAAG+GGG | - | chr5.2:10598153-10598172 | None:intergenic | 30.0% | |
| AACTATATCCAACTCATGAA+GGG | - | chr5.2:10599322-10599341 | None:intergenic | 30.0% | |
| AATGACTGCTTCATATATTC+TGG | + | chr5.2:10599282-10599301 | MS.gene74489:intron | 30.0% | |
| ACAACTTTGTAAAATTGACG+AGG | + | chr5.2:10597678-10597697 | MS.gene74489:CDS | 30.0% | |
| ACTCAGCAATTCATTAGTTA+GGG | + | chr5.2:10598767-10598786 | MS.gene74489:intron | 30.0% | |
| AGTTTGAAAAGAGTCGAATT+TGG | - | chr5.2:10600493-10600512 | None:intergenic | 30.0% | |
| ATCAAAGTAGTCTCTTATCA+TGG | + | chr5.2:10599013-10599032 | MS.gene74489:intron | 30.0% | |
| ATTCAATTAAGTTTGAGCAC+TGG | + | chr5.2:10597823-10597842 | MS.gene74489:CDS | 30.0% | |
| ATTTACTTTGTCACGAAACA+TGG | + | chr5.2:10598470-10598489 | MS.gene74489:intron | 30.0% | |
| ATTTCTTGCATGATGTTATC+AGG | - | chr5.2:10600856-10600875 | None:intergenic | 30.0% | |
| CTAATCATAGAATTTCAGGA+GGG | + | chr5.2:10597054-10597073 | MS.gene74489:CDS | 30.0% | |
| GAAAACTGTAAAGGAACAAA+TGG | - | chr5.2:10598854-10598873 | None:intergenic | 30.0% | |
| GTTTCCTAATTAGTAACAAC+GGG | - | chr5.2:10600009-10600028 | None:intergenic | 30.0% | |
| TACTCAGCAATTCATTAGTT+AGG | + | chr5.2:10598766-10598785 | MS.gene74489:intron | 30.0% | |
| TCAGAGATTTAGTACATATG+CGG | + | chr5.2:10598107-10598126 | MS.gene74489:intron | 30.0% | |
| TCTAATCATAGAATTTCAGG+AGG | + | chr5.2:10597053-10597072 | MS.gene74489:CDS | 30.0% | |
| TGCAACTTAAAAATCTTCCA+TGG | - | chr5.2:10598611-10598630 | None:intergenic | 30.0% | |
| TGGTTTACAAAGTTTCTCAA+TGG | + | chr5.2:10597029-10597048 | MS.gene74489:CDS | 30.0% | |
| TTGCTTCACTATTGAATGTA+GGG | + | chr5.2:10600389-10600408 | MS.gene74489:intron | 30.0% | |
| TTGTGAAAGCAGATGTTATA+TGG | - | chr5.2:10600703-10600722 | None:intergenic | 30.0% | |
| TTTATCTCATAATGTCTCAG+AGG | + | chr5.2:10597630-10597649 | MS.gene74489:intron | 30.0% | |
| TTTCTTGCATGATGTTATCA+GGG | - | chr5.2:10600855-10600874 | None:intergenic | 30.0% | |
| TTTGCTTCACTATTGAATGT+AGG | + | chr5.2:10600388-10600407 | MS.gene74489:intron | 30.0% | |
| ! | AACATGGTGATGATAGAATT+TGG | + | chr5.2:10597090-10597109 | MS.gene74489:CDS | 30.0% |
| ! | AAGAGGACAAAAAAGTGTAA+AGG | - | chr5.2:10598164-10598183 | None:intergenic | 30.0% |
| ! | ACATGGTGATGATAGAATTT+GGG | + | chr5.2:10597091-10597110 | MS.gene74489:CDS | 30.0% |
| ! | ACTGAAATTTGAGGTTAATC+AGG | - | chr5.2:10599494-10599513 | None:intergenic | 30.0% |
| ! | TCATGTTAGTTTCTCTTTAC+AGG | - | chr5.2:10599457-10599476 | None:intergenic | 30.0% |
| ! | TGATAGACATGTCATTGTTT+TGG | - | chr5.2:10599778-10599797 | None:intergenic | 30.0% |
| ! | TGGGTAACATATGTTTCTAA+TGG | + | chr5.2:10597493-10597512 | MS.gene74489:intron | 30.0% |
| !! | CAGTATTTTTGTATCCAGAA+AGG | - | chr5.2:10599912-10599931 | None:intergenic | 30.0% |
| !! | CTGATTTTGAGAAGAAACTT+GGG | + | chr5.2:10601106-10601125 | MS.gene74489:CDS | 30.0% |
| !! | TCTGATTTTGAGAAGAAACT+TGG | + | chr5.2:10601105-10601124 | MS.gene74489:CDS | 30.0% |
| !! | TGATTTTGAGAAGAAACTTG+GGG | + | chr5.2:10601107-10601126 | MS.gene74489:CDS | 30.0% |
| !! | TTGGATTTGCTAATCAGATA+AGG | - | chr5.2:10597940-10597959 | None:intergenic | 30.0% |
| !!! | GGAAGATTTTTAAGTTGCAT+GGG | + | chr5.2:10598612-10598631 | MS.gene74489:CDS | 30.0% |
| !!! | TGGAAGATTTTTAAGTTGCA+TGG | + | chr5.2:10598611-10598630 | MS.gene74489:CDS | 30.0% |
| AACAGTATTGCCATTGTGAA+AGG | + | chr5.2:10598273-10598292 | MS.gene74489:intron | 35.0% | |
| AAGGCCATACAAAACAAGAA+TGG | - | chr5.2:10600671-10600690 | None:intergenic | 35.0% | |
| AAGTGTAAAGGAAAACAAGG+GGG | - | chr5.2:10598152-10598171 | None:intergenic | 35.0% | |
| ACAGTATTGCCATTGTGAAA+GGG | + | chr5.2:10598274-10598293 | MS.gene74489:intron | 35.0% | |
| ACCTAATAAAGTGGACGATA+AGG | + | chr5.2:10597998-10598017 | MS.gene74489:intron | 35.0% | |
| AGCTTCTTAAACATTGAGGT+TGG | - | chr5.2:10599200-10599219 | None:intergenic | 35.0% | |
| AGTTAAGTTCCAACTCAAAG+TGG | + | chr5.2:10597473-10597492 | MS.gene74489:intron | 35.0% | |
| ATAACAGAAAGACAGAAGGA+GGG | - | chr5.2:10600348-10600367 | None:intergenic | 35.0% | |
| ATATGTTACCCACTTTGAGT+TGG | - | chr5.2:10597485-10597504 | None:intergenic | 35.0% | |
| CAACTATATCCAACTCATGA+AGG | - | chr5.2:10599323-10599342 | None:intergenic | 35.0% | |
| CAGATGTTATATGGTTACCT+AGG | - | chr5.2:10600694-10600713 | None:intergenic | 35.0% | |
| CAGATTCCTTCTTCAATTTC+TGG | - | chr5.2:10600952-10600971 | None:intergenic | 35.0% | |
| CTAACCTCATAATCAGTGAT+TGG | - | chr5.2:10598684-10598703 | None:intergenic | 35.0% | |
| CTAATGGTTAGAGATCATTG+AGG | + | chr5.2:10597509-10597528 | MS.gene74489:intron | 35.0% | |
| CTAGACATGGAAAACTGTAA+AGG | - | chr5.2:10598863-10598882 | None:intergenic | 35.0% | |
| CTTGATCATATCCATTTGAC+CGG | + | chr5.2:10601231-10601250 | MS.gene74489:CDS | 35.0% | |
| GAACAGCTTCTTAAACATTG+AGG | - | chr5.2:10599204-10599223 | None:intergenic | 35.0% | |
| GCTTCATATATTCTGGTAAC+CGG | + | chr5.2:10599289-10599308 | MS.gene74489:intron | 35.0% | |
| GCTTCTTAAACATTGAGGTT+GGG | - | chr5.2:10599199-10599218 | None:intergenic | 35.0% | |
| GGATAATCATCATAGTTCAG+TGG | + | chr5.2:10597112-10597131 | MS.gene74489:CDS | 35.0% | |
| GGTCAAATGGATATGATCAA+GGG | - | chr5.2:10601232-10601251 | None:intergenic | 35.0% | |
| GTTAAGTTCCAACTCAAAGT+GGG | + | chr5.2:10597474-10597493 | MS.gene74489:intron | 35.0% | |
| GTTCATTTCAATAACTGGTC+TGG | + | chr5.2:10599342-10599361 | MS.gene74489:intron | 35.0% | |
| TAGGATAACAGAAAGACAGA+AGG | - | chr5.2:10600352-10600371 | None:intergenic | 35.0% | |
| TATAATTACCTGAATCCTGG+TGG | - | chr5.2:10597904-10597923 | None:intergenic | 35.0% | |
| TATTCTTCCATTACAGATCC+CGG | + | chr5.2:10599851-10599870 | MS.gene74489:intron | 35.0% | |
| TCTAGTATTTCATGGTAGAG+AGG | - | chr5.2:10600182-10600201 | None:intergenic | 35.0% | |
| TCTCACTTCTCAAAAATGTG+AGG | + | chr5.2:10599222-10599241 | MS.gene74489:intron | 35.0% | |
| TCTTGCAAACATCACATCTT+GGG | - | chr5.2:10598928-10598947 | None:intergenic | 35.0% | |
| TGTTATATGGTTACCTAGGA+AGG | - | chr5.2:10600690-10600709 | None:intergenic | 35.0% | |
| TTACCATAAATCCTGCTACA+GGG | + | chr5.2:10598892-10598911 | MS.gene74489:CDS | 35.0% | |
| TTAGAATCAGAGCTCTATTC+TGG | + | chr5.2:10600994-10601013 | MS.gene74489:CDS | 35.0% | |
| TTATAGGTTATCCCAACTTG+AGG | + | chr5.2:10600926-10600945 | MS.gene74489:intron | 35.0% | |
| TTCTTGCAAACATCACATCT+TGG | - | chr5.2:10598929-10598948 | None:intergenic | 35.0% | |
| TTTGGTATGGGATAGATGAT+CGG | - | chr5.2:10597586-10597605 | None:intergenic | 35.0% | |
| ! | ATGAACAACATACCTGGTTT+TGG | + | chr5.2:10598540-10598559 | MS.gene74489:intron | 35.0% |
| ! | CAGAGAAATTTTCCAAAACC+AGG | - | chr5.2:10598555-10598574 | None:intergenic | 35.0% |
| ! | GAGGCCTTTTACTTATACTT+TGG | - | chr5.2:10597604-10597623 | None:intergenic | 35.0% |
| ! | GGCTCTAATCATAGAATTTC+AGG | + | chr5.2:10597050-10597069 | MS.gene74489:CDS | 35.0% |
| !!! | ACAGCCATTCTTGTTTTGTA+TGG | + | chr5.2:10600664-10600683 | MS.gene74489:CDS | 35.0% |
| !!! | AGATTTTTAAGTTGCATGGG+AGG | + | chr5.2:10598615-10598634 | MS.gene74489:CDS | 35.0% |
| !!! | ATGTCTTCTTTTTCGACATC+CGG | - | chr5.2:10597270-10597289 | None:intergenic | 35.0% |
| !!! | ATTTTTAAGTTGCATGGGAG+GGG | + | chr5.2:10598617-10598636 | MS.gene74489:CDS | 35.0% |
| !!! | CATGTCATTGTTTTGGTAAG+AGG | - | chr5.2:10599771-10599790 | None:intergenic | 35.0% |
| !!! | CTTTTTTGTCCTCTTTCTCA+TGG | + | chr5.2:10598169-10598188 | MS.gene74489:intron | 35.0% |
| !!! | GATTTTTAAGTTGCATGGGA+GGG | + | chr5.2:10598616-10598635 | MS.gene74489:CDS | 35.0% |
| !!! | TGAAGGCATTGAATTTTGGA+AGG | - | chr5.2:10599648-10599667 | None:intergenic | 35.0% |
| !!! | TGGTTGAAGGCATTGAATTT+TGG | - | chr5.2:10599652-10599671 | None:intergenic | 35.0% |
| AAATGTCGTCCATGAGAAAG+AGG | - | chr5.2:10598181-10598200 | None:intergenic | 40.0% | |
| AAGAGTCGAATTTGGAAGCA+AGG | - | chr5.2:10600485-10600504 | None:intergenic | 40.0% | |
| AATACTCGAGTATGTTCTGC+TGG | + | chr5.2:10599253-10599272 | MS.gene74489:intron | 40.0% | |
| AATTCAATGCCTTCAACCAC+AGG | + | chr5.2:10599653-10599672 | MS.gene74489:intron | 40.0% | |
| AATTGCACTCTCTCTATCAG+AGG | + | chr5.2:10597299-10597318 | MS.gene74489:CDS | 40.0% | |
| ACACAAAACCCCTTTCACAA+TGG | - | chr5.2:10598286-10598305 | None:intergenic | 40.0% | |
| AGAAGGAATCTGTCAAGTGT+TGG | + | chr5.2:10600960-10600979 | MS.gene74489:CDS | 40.0% | |
| AGCAGGATTTATGGTAAGGA+CGG | - | chr5.2:10598889-10598908 | None:intergenic | 40.0% | |
| AGTATAGAGCTCATCCTTTC+TGG | + | chr5.2:10599895-10599914 | MS.gene74489:CDS | 40.0% | |
| AGTGTAAAGGAAAACAAGGG+GGG | - | chr5.2:10598151-10598170 | None:intergenic | 40.0% | |
| ATACTCGAGTATGTTCTGCT+GGG | + | chr5.2:10599254-10599273 | MS.gene74489:intron | 40.0% | |
| ATCTCATAATGTCTCAGAGG+AGG | + | chr5.2:10597633-10597652 | MS.gene74489:intron | 40.0% | |
| ATGGAAAAGTTCCGGTCAAA+TGG | - | chr5.2:10601245-10601264 | None:intergenic | 40.0% | |
| ATTCAATGCCTTCAACCACA+GGG | + | chr5.2:10599654-10599673 | MS.gene74489:intron | 40.0% | |
| ATTTCAGGAGGGCAATACAA+TGG | + | chr5.2:10597065-10597084 | MS.gene74489:CDS | 40.0% | |
| CACCATTTACCTGAAACTAG+AGG | + | chr5.2:10600416-10600435 | MS.gene74489:CDS | 40.0% | |
| CAGTATTGCCATTGTGAAAG+GGG | + | chr5.2:10598275-10598294 | MS.gene74489:intron | 40.0% | |
| CATAATCAGTGATTGGCAGA+TGG | - | chr5.2:10598677-10598696 | None:intergenic | 40.0% | |
| CATGCATTATCTCATGAGCT+AGG | - | chr5.2:10600800-10600819 | None:intergenic | 40.0% | |
| CCATCCCGTTGTTACTAATT+AGG | + | chr5.2:10600002-10600021 | MS.gene74489:intron | 40.0% | |
| CCTAATTAGTAACAACGGGA+TGG | - | chr5.2:10600005-10600024 | None:intergenic | 40.0% | |
| CGGTCAAATGGATATGATCA+AGG | - | chr5.2:10601233-10601252 | None:intergenic | 40.0% | |
| CTCATGAGATAATGCATGCA+TGG | + | chr5.2:10600802-10600821 | MS.gene74489:CDS | 40.0% | |
| CTGAAAGGGAAGAAAGTTGT+TGG | + | chr5.2:10597327-10597346 | MS.gene74489:CDS | 40.0% | |
| CTGTAGCAGGATTTATGGTA+AGG | - | chr5.2:10598893-10598912 | None:intergenic | 40.0% | |
| CTTACCATAAATCCTGCTAC+AGG | + | chr5.2:10598891-10598910 | MS.gene74489:CDS | 40.0% | |
| GATAACAGAAAGACAGAAGG+AGG | - | chr5.2:10600349-10600368 | None:intergenic | 40.0% | |
| GATGAGCTCTATACTCAATG+AGG | - | chr5.2:10599890-10599909 | None:intergenic | 40.0% | |
| GCCTTATCGTCCACTTTATT+AGG | - | chr5.2:10598002-10598021 | None:intergenic | 40.0% | |
| GCTAGTTGCACCTAATAAAG+TGG | + | chr5.2:10597989-10598008 | MS.gene74489:intron | 40.0% | |
| GGAAAGACAAGCACTAAATG+AGG | + | chr5.2:10600256-10600275 | MS.gene74489:CDS | 40.0% | |
| GTATTTCATGGTAGAGAGGT+TGG | - | chr5.2:10600178-10600197 | None:intergenic | 40.0% | |
| GTCCCACATTGGATAACAAA+TGG | + | chr5.2:10599106-10599125 | MS.gene74489:intron | 40.0% | |
| GTGTCTAGACTCAGCAATTA+TGG | + | chr5.2:10600139-10600158 | MS.gene74489:CDS | 40.0% | |
| TATCAGAGGAGGATCTGAAA+GGG | + | chr5.2:10597313-10597332 | MS.gene74489:CDS | 40.0% | |
| TGCATGATGTTATCAGGGAA+CGG | - | chr5.2:10600850-10600869 | None:intergenic | 40.0% | |
| TGGTTATCATGTCTGTGACT+CGG | - | chr5.2:10600612-10600631 | None:intergenic | 40.0% | |
| TGTGTAAAAGAGTCCCACAT+TGG | + | chr5.2:10599095-10599114 | MS.gene74489:intron | 40.0% | |
| TGTTCTGCATCATCGAAGAA+GGG | + | chr5.2:10601075-10601094 | MS.gene74489:CDS | 40.0% | |
| TTCTTCGATGATGCAGAACA+CGG | - | chr5.2:10601075-10601094 | None:intergenic | 40.0% | |
| TTGAGGCCAGAAATTGAAGA+AGG | + | chr5.2:10600943-10600962 | MS.gene74489:CDS | 40.0% | |
| TTGGAAGCAAGGAATTCCTA+CGG | - | chr5.2:10600474-10600493 | None:intergenic | 40.0% | |
| TTGTTGTAGCTGCGAAAGAA+TGG | + | chr5.2:10599962-10599981 | MS.gene74489:CDS | 40.0% | |
| TTTCTAATCTGTGCAGCCAA+AGG | + | chr5.2:10600070-10600089 | MS.gene74489:intron | 40.0% | |
| ! | CACATTCTTTTCTCCCTCAA+TGG | - | chr5.2:10600282-10600301 | None:intergenic | 40.0% |
| ! | CCTGAACATGTGTTTAGAGT+GGG | + | chr5.2:10599129-10599148 | MS.gene74489:intron | 40.0% |
| ! | CCTTCTAGCTAAAATTCAGC+AGG | + | chr5.2:10597741-10597760 | MS.gene74489:CDS | 40.0% |
| ! | CTATGGAGATGGATTCAGAT+CGG | + | chr5.2:10601170-10601189 | MS.gene74489:CDS | 40.0% |
| ! | CTGAACATGTGTTTAGAGTG+GGG | + | chr5.2:10599130-10599149 | MS.gene74489:intron | 40.0% |
| ! | GTCCTCTAGTTTCAGGTAAA+TGG | - | chr5.2:10600421-10600440 | None:intergenic | 40.0% |
| ! | TATGGAGATGGATTCAGATC+GGG | + | chr5.2:10601171-10601190 | MS.gene74489:CDS | 40.0% |
| ! | TCTGCCAATCACTGATTATG+AGG | + | chr5.2:10598677-10598696 | MS.gene74489:CDS | 40.0% |
| ! | TGAACATGTGTTTAGAGTGG+GGG | + | chr5.2:10599131-10599150 | MS.gene74489:intron | 40.0% |
| ! | TGTCTTTCCACCAAAAGCAT+AGG | - | chr5.2:10600245-10600264 | None:intergenic | 40.0% |
| !! | AGGCCATTTGTTATCCAATG+TGG | - | chr5.2:10599112-10599131 | None:intergenic | 40.0% |
| !! | GGCATTGAATTTTGGAAGGA+AGG | - | chr5.2:10599644-10599663 | None:intergenic | 40.0% |
| !! | GGCCATTTGTTATCCAATGT+GGG | - | chr5.2:10599111-10599130 | None:intergenic | 40.0% |
| !! | GTCTTCCTCAAGTTGATCTT+TGG | - | chr5.2:10597785-10597804 | None:intergenic | 40.0% |
| !! | TCAATTTCTGGCCTCAAGTT+GGG | - | chr5.2:10600940-10600959 | None:intergenic | 40.0% |
| !! | TTCAATTTCTGGCCTCAAGT+TGG | - | chr5.2:10600941-10600960 | None:intergenic | 40.0% |
| !! | TTGTTTTGTATGGCCTTCCT+AGG | + | chr5.2:10600674-10600693 | MS.gene74489:CDS | 40.0% |
| !!! | CCTGCTGAATTTTAGCTAGA+AGG | - | chr5.2:10597744-10597763 | None:intergenic | 40.0% |
| AATTGTGGTGAACTGAGTGC+AGG | + | chr5.2:10597236-10597255 | MS.gene74489:intron | 45.0% | |
| ACCAGGCGGTACTTAAGTAT+GGG | + | chr5.2:10601196-10601215 | MS.gene74489:CDS | 45.0% | |
| AGAAAACCAAGTATAGGGGC+AGG | + | chr5.2:10600583-10600602 | MS.gene74489:CDS | 45.0% | |
| AGAGAATCTTTGCCATGTCG+AGG | - | chr5.2:10597856-10597875 | None:intergenic | 45.0% | |
| AGATAATGCATGCATGGCTC+AGG | + | chr5.2:10600808-10600827 | MS.gene74489:CDS | 45.0% | |
| AGCACTAAATGAGGCCATTG+AGG | + | chr5.2:10600265-10600284 | MS.gene74489:CDS | 45.0% | |
| ATATATTCTGGTAACCGGCC+TGG | + | chr5.2:10599294-10599313 | MS.gene74489:intron | 45.0% | |
| CCCACTCTAAACACATGTTC+AGG | - | chr5.2:10599132-10599151 | None:intergenic | 45.0% | |
| CGATCTGAATCCATCTCCAT+AGG | - | chr5.2:10601172-10601191 | None:intergenic | 45.0% | |
| CTAACACAACCCCACAAAAC+CGG | - | chr5.2:10599175-10599194 | None:intergenic | 45.0% | |
| CTATCAGAGGAGGATCTGAA+AGG | + | chr5.2:10597312-10597331 | MS.gene74489:CDS | 45.0% | |
| GAATTAGCCGGGATCTGTAA+TGG | - | chr5.2:10599861-10599880 | None:intergenic | 45.0% | |
| GACGAGGAAGATGAGAATGT+TGG | + | chr5.2:10597694-10597713 | MS.gene74489:CDS | 45.0% | |
| GATGATGAAGACGAAGACGA+AGG | - | chr5.2:10601042-10601061 | None:intergenic | 45.0% | |
| GCACTAAATGAGGCCATTGA+GGG | + | chr5.2:10600266-10600285 | MS.gene74489:CDS | 45.0% | |
| GCCTGAACATGTGTTTAGAG+TGG | + | chr5.2:10599128-10599147 | MS.gene74489:intron | 45.0% | |
| GCTGCAATGTACATATGCTC+TGG | + | chr5.2:10599054-10599073 | MS.gene74489:intron | 45.0% | |
| GGGCAATACAATGGCAAACA+TGG | + | chr5.2:10597074-10597093 | MS.gene74489:CDS | 45.0% | |
| GTGTTCTGCATCATCGAAGA+AGG | + | chr5.2:10601074-10601093 | MS.gene74489:CDS | 45.0% | |
| TACCAGGCGGTACTTAAGTA+TGG | + | chr5.2:10601195-10601214 | MS.gene74489:CDS | 45.0% | |
| TCTCCCTGTAGCAGGATTTA+TGG | - | chr5.2:10598898-10598917 | None:intergenic | 45.0% | |
| TGCTTTCACAATCTAGCGCT+TGG | + | chr5.2:10600712-10600731 | MS.gene74489:intron | 45.0% | |
| TGGTACTGTGGAACAGATCA+TGG | + | chr5.2:10599362-10599381 | MS.gene74489:intron | 45.0% | |
| TGTTGCATTCATACTCCCTG+TGG | - | chr5.2:10599672-10599691 | None:intergenic | 45.0% | |
| TTCATACTCCCTGTGGTTGA+AGG | - | chr5.2:10599665-10599684 | None:intergenic | 45.0% | |
| TTGTAGCTGCGAAAGAATGG+AGG | + | chr5.2:10599965-10599984 | MS.gene74489:CDS | 45.0% | |
| TTTCTCTGCAGAATCTGTGC+TGG | + | chr5.2:10598567-10598586 | MS.gene74489:intron | 45.0% | |
| ! | AAGCAGAGTCCTCTAGTTTC+AGG | - | chr5.2:10600428-10600447 | None:intergenic | 45.0% |
| ! | CAATAACTGGTCTGGTACTG+TGG | + | chr5.2:10599350-10599369 | MS.gene74489:intron | 45.0% |
| ! | GCAAGTTCCTATGCTTTTGG+TGG | + | chr5.2:10600235-10600254 | MS.gene74489:CDS | 45.0% |
| ! | GCAGCAAGTTCCTATGCTTT+TGG | + | chr5.2:10600232-10600251 | MS.gene74489:CDS | 45.0% |
| ! | GTGAGGTATCTGACTCAATC+TGG | - | chr5.2:10601146-10601165 | None:intergenic | 45.0% |
| ! | TGCAAGCAACAAGTGTTGTG+TGG | + | chr5.2:10599814-10599833 | MS.gene74489:intron | 45.0% |
| !! | CCTCAAGTTGATCTTTGGCA+CGG | - | chr5.2:10597780-10597799 | None:intergenic | 45.0% |
| !! | GTCAAGTGTTGGCTCATATG+TGG | + | chr5.2:10600971-10600990 | MS.gene74489:CDS | 45.0% |
| !!! | ATATATGTTTTTTTTTTTAT+AGG | + | chr5.2:10600910-10600929 | MS.gene74489:intron | 5.0% |
| AATCCTGGTGGAAAGAGGTG+GGG | - | chr5.2:10597892-10597911 | None:intergenic | 50.0% | |
| ACCTCTTTCCACCAGGATTC+AGG | + | chr5.2:10597893-10597912 | MS.gene74489:CDS | 50.0% | |
| ACCTGAATCCTGGTGGAAAG+AGG | - | chr5.2:10597897-10597916 | None:intergenic | 50.0% | |
| ACGGGTCAGTCTATAAGGCT+TGG | - | chr5.2:10600632-10600651 | None:intergenic | 50.0% | |
| AGGAAGACGAGCAACTTGCA+AGG | + | chr5.2:10597797-10597816 | MS.gene74489:CDS | 50.0% | |
| AGGAATTCCTACGGTGGTGA+CGG | - | chr5.2:10600465-10600484 | None:intergenic | 50.0% | |
| ATGAGGCCAGCTGAATTAGC+CGG | - | chr5.2:10599873-10599892 | None:intergenic | 50.0% | |
| ATTCAGATCGGGTTACCAGG+CGG | + | chr5.2:10601182-10601201 | MS.gene74489:CDS | 50.0% | |
| CATCGACGGGTCAGTCTATA+AGG | - | chr5.2:10600637-10600656 | None:intergenic | 50.0% | |
| CATGCATGGCTCAGGCTTAA+AGG | + | chr5.2:10600816-10600835 | MS.gene74489:CDS | 50.0% | |
| CCGTGCCAAAGATCAACTTG+AGG | + | chr5.2:10597777-10597796 | MS.gene74489:CDS | 50.0% | |
| CTGAATCCATCTCCATAGGC+TGG | - | chr5.2:10601168-10601187 | None:intergenic | 50.0% | |
| CTTTCGCAGCTACAACAACG+AGG | - | chr5.2:10599960-10599979 | None:intergenic | 50.0% | |
| GAAGCAAGGAATTCCTACGG+TGG | - | chr5.2:10600471-10600490 | None:intergenic | 50.0% | |
| GAATCCTGGTGGAAAGAGGT+GGG | - | chr5.2:10597893-10597912 | None:intergenic | 50.0% | |
| GAATCTTTGCCATGTCGAGG+AGG | - | chr5.2:10597853-10597872 | None:intergenic | 50.0% | |
| GATGAAGACGAAGACGAAGG+CGG | - | chr5.2:10601039-10601058 | None:intergenic | 50.0% | |
| GCTGGATGCAATGCTGAGAT+TGG | + | chr5.2:10598585-10598604 | MS.gene74489:CDS | 50.0% | |
| GGAAGACGAGCAACTTGCAA+GGG | + | chr5.2:10597798-10597817 | MS.gene74489:CDS | 50.0% | |
| GTAAGGACGGTTGCTAGACA+TGG | - | chr5.2:10598876-10598895 | None:intergenic | 50.0% | |
| TCAGATACCTCACCAGCCTA+TGG | + | chr5.2:10601153-10601172 | MS.gene74489:CDS | 50.0% | |
| TCCAACTCATGAAGGGATCC+AGG | - | chr5.2:10599315-10599334 | None:intergenic | 50.0% | |
| TGAATCCTGGTGGAAAGAGG+TGG | - | chr5.2:10597894-10597913 | None:intergenic | 50.0% | |
| TGATTGGCAGATGGCAAGCA+TGG | - | chr5.2:10598668-10598687 | None:intergenic | 50.0% | |
| TGCACTCTCTCTATCAGAGG+AGG | + | chr5.2:10597302-10597321 | MS.gene74489:CDS | 50.0% | |
| TGGATTCAGATCGGGTTACC+AGG | + | chr5.2:10601179-10601198 | MS.gene74489:CDS | 50.0% | |
| TTCGATGATGCAGAACACGG+CGG | - | chr5.2:10601072-10601091 | None:intergenic | 50.0% | |
| ! | CTGAGTGCAGGATGATTTGC+CGG | + | chr5.2:10597248-10597267 | MS.gene74489:intron | 50.0% |
| ! | TGCAATGCTGAGATTGGCCA+TGG | + | chr5.2:10598591-10598610 | MS.gene74489:CDS | 50.0% |
| !! | ACCTCACAAGCCGGTTTTGT+GGG | + | chr5.2:10599162-10599181 | MS.gene74489:intron | 50.0% |
| !! | CGGTTTTGTGGGGTTGTGTT+AGG | + | chr5.2:10599173-10599192 | MS.gene74489:intron | 50.0% |
| !! | GCATGGCATTGGAAGCATTG+TGG | - | chr5.2:10598651-10598670 | None:intergenic | 50.0% |
| ACCTCACCAGCCTATGGAGA+TGG | + | chr5.2:10601159-10601178 | MS.gene74489:CDS | 55.0% | |
| ACTCATGAAGGGATCCAGGC+CGG | - | chr5.2:10599311-10599330 | None:intergenic | 55.0% | |
| CAGATCCCGGCTAATTCAGC+TGG | + | chr5.2:10599864-10599883 | MS.gene74489:intron | 55.0% | |
| GAACAAACCGTCACCACCGT+AGG | + | chr5.2:10600455-10600474 | MS.gene74489:intron | 55.0% | |
| GCAATCCTCACCTCACAAGC+CGG | + | chr5.2:10599153-10599172 | MS.gene74489:intron | 55.0% | |
| GCAGATGGCAAGCATGGCAT+TGG | - | chr5.2:10598662-10598681 | None:intergenic | 55.0% | |
| GCCTGGATCCCTTCATGAGT+TGG | + | chr5.2:10599311-10599330 | MS.gene74489:intron | 55.0% | |
| GTGATGCTTCTCCCTGTAGC+AGG | - | chr5.2:10598906-10598925 | None:intergenic | 55.0% | |
| TAAGTTGCATGGGAGGGGTC+TGG | + | chr5.2:10598622-10598641 | MS.gene74489:CDS | 55.0% | |
| TCCATCTCCATAGGCTGGTG+AGG | - | chr5.2:10601163-10601182 | None:intergenic | 55.0% | |
| TGAGGCCAGCTGAATTAGCC+GGG | - | chr5.2:10599872-10599891 | None:intergenic | 55.0% | |
| TGCTGTCGAGCTCATGCGTT+GGG | - | chr5.2:10599935-10599954 | None:intergenic | 55.0% | |
| ! | ACTGGTTCTCCTCCTCGACA+TGG | + | chr5.2:10597841-10597860 | MS.gene74489:CDS | 55.0% |
| ! | GCCCATACTTAAGTACCGCC+TGG | - | chr5.2:10601200-10601219 | None:intergenic | 55.0% |
| ! | TGGCTGTCACTTCGCATCGA+CGG | - | chr5.2:10600651-10600670 | None:intergenic | 55.0% |
| !! | CAAAACCGGCTTGTGAGGTG+AGG | - | chr5.2:10599161-10599180 | None:intergenic | 55.0% |
| !! | CACCTCACAAGCCGGTTTTG+TGG | + | chr5.2:10599161-10599180 | MS.gene74489:intron | 55.0% |
| !! | CCTCACAAGCCGGTTTTGTG+GGG | + | chr5.2:10599163-10599182 | MS.gene74489:intron | 55.0% |
| CGGTGTCCTGCCCCTATACT+TGG | - | chr5.2:10600592-10600611 | None:intergenic | 60.0% | |
| GGTGGAAAGAGGTGGGGAGA+AGG | - | chr5.2:10597886-10597905 | None:intergenic | 60.0% | |
| GTGCTGTCGAGCTCATGCGT+TGG | - | chr5.2:10599936-10599955 | None:intergenic | 60.0% | |
| TCTCCCCACCTCTTTCCACC+AGG | + | chr5.2:10597886-10597905 | MS.gene74489:CDS | 60.0% | |
| ! | GGCTGTCACTTCGCATCGAC+GGG | - | chr5.2:10600650-10600669 | None:intergenic | 60.0% |
| !! | CCCCACAAAACCGGCTTGTG+AGG | - | chr5.2:10599166-10599185 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 10597023 | 10601269 | 10597023 | ID=MS.gene74489 |
| chr5.2 | mRNA | 10597023 | 10601269 | 10597023 | ID=MS.gene74489.t1;Parent=MS.gene74489 |
| chr5.2 | exon | 10597023 | 10597133 | 10597023 | ID=MS.gene74489.t1.exon1;Parent=MS.gene74489.t1 |
| chr5.2 | CDS | 10597023 | 10597133 | 10597023 | ID=cds.MS.gene74489.t1;Parent=MS.gene74489.t1 |
| chr5.2 | exon | 10597258 | 10597348 | 10597258 | ID=MS.gene74489.t1.exon2;Parent=MS.gene74489.t1 |
| chr5.2 | CDS | 10597258 | 10597348 | 10597258 | ID=cds.MS.gene74489.t1;Parent=MS.gene74489.t1 |
| chr5.2 | exon | 10597650 | 10597914 | 10597650 | ID=MS.gene74489.t1.exon3;Parent=MS.gene74489.t1 |
| chr5.2 | CDS | 10597650 | 10597914 | 10597650 | ID=cds.MS.gene74489.t1;Parent=MS.gene74489.t1 |
| chr5.2 | exon | 10598578 | 10598698 | 10598578 | ID=MS.gene74489.t1.exon4;Parent=MS.gene74489.t1 |
| chr5.2 | CDS | 10598578 | 10598698 | 10598578 | ID=cds.MS.gene74489.t1;Parent=MS.gene74489.t1 |
| chr5.2 | exon | 10598869 | 10598952 | 10598869 | ID=MS.gene74489.t1.exon5;Parent=MS.gene74489.t1 |
| chr5.2 | CDS | 10598869 | 10598952 | 10598869 | ID=cds.MS.gene74489.t1;Parent=MS.gene74489.t1 |
| chr5.2 | exon | 10599867 | 10599986 | 10599867 | ID=MS.gene74489.t1.exon6;Parent=MS.gene74489.t1 |
| chr5.2 | CDS | 10599867 | 10599986 | 10599867 | ID=cds.MS.gene74489.t1;Parent=MS.gene74489.t1 |
| chr5.2 | exon | 10600086 | 10600298 | 10600086 | ID=MS.gene74489.t1.exon7;Parent=MS.gene74489.t1 |
| chr5.2 | CDS | 10600086 | 10600298 | 10600086 | ID=cds.MS.gene74489.t1;Parent=MS.gene74489.t1 |
| chr5.2 | exon | 10600410 | 10600472 | 10600410 | ID=MS.gene74489.t1.exon8;Parent=MS.gene74489.t1 |
| chr5.2 | CDS | 10600410 | 10600472 | 10600410 | ID=cds.MS.gene74489.t1;Parent=MS.gene74489.t1 |
| chr5.2 | exon | 10600577 | 10600695 | 10600577 | ID=MS.gene74489.t1.exon9;Parent=MS.gene74489.t1 |
| chr5.2 | CDS | 10600577 | 10600695 | 10600577 | ID=cds.MS.gene74489.t1;Parent=MS.gene74489.t1 |
| chr5.2 | exon | 10600779 | 10600837 | 10600779 | ID=MS.gene74489.t1.exon10;Parent=MS.gene74489.t1 |
| chr5.2 | CDS | 10600779 | 10600837 | 10600779 | ID=cds.MS.gene74489.t1;Parent=MS.gene74489.t1 |
| chr5.2 | exon | 10600932 | 10601269 | 10600932 | ID=MS.gene74489.t1.exon11;Parent=MS.gene74489.t1 |
| chr5.2 | CDS | 10600932 | 10601269 | 10600932 | ID=cds.MS.gene74489.t1;Parent=MS.gene74489.t1 |
| Gene Sequence |
| Protein sequence |
