Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74568.t1 | XP_013463003.1 | 93.6 | 683 | 44 | 0 | 1 | 683 | 1 | 683 | 0.00E+00 | 1159.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74568.t1 | A9LNK9 | 64.6 | 689 | 177 | 17 | 1 | 680 | 1 | 631 | 1.8e-191 | 670.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74568.t1 | A0A072V6R5 | 93.6 | 683 | 44 | 0 | 1 | 683 | 1 | 683 | 0.0e+00 | 1159.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene74568.t1 | TF | C3H |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74568.t1 | MTR_2g029540 | 97.218 | 683 | 19 | 0 | 1 | 683 | 1 | 683 | 0.0 | 1375 |
MS.gene74568.t1 | MTR_8g088390 | 26.452 | 155 | 104 | 2 | 246 | 394 | 343 | 493 | 1.92e-12 | 70.9 |
MS.gene74568.t1 | MTR_7g085500 | 29.710 | 138 | 91 | 2 | 259 | 394 | 432 | 565 | 2.69e-12 | 70.5 |
MS.gene74568.t1 | MTR_4g005110 | 26.316 | 152 | 101 | 3 | 259 | 403 | 395 | 542 | 3.60e-12 | 70.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74568.t1 | AT1G30460 | 61.718 | 687 | 200 | 16 | 1 | 680 | 1 | 631 | 0.0 | 669 |
MS.gene74568.t1 | AT1G30460 | 67.464 | 418 | 104 | 8 | 1 | 413 | 1 | 391 | 1.14e-179 | 517 |
MS.gene74568.t1 | AT1G30460 | 57.143 | 266 | 82 | 8 | 1 | 261 | 1 | 239 | 2.65e-75 | 242 |
MS.gene74568.t1 | AT4G11970 | 50.667 | 150 | 70 | 3 | 246 | 394 | 61 | 207 | 5.37e-35 | 137 |
MS.gene74568.t1 | AT4G11970 | 50.667 | 150 | 70 | 3 | 246 | 394 | 61 | 207 | 5.49e-35 | 136 |
MS.gene74568.t1 | AT4G11970 | 50.667 | 150 | 70 | 3 | 246 | 394 | 61 | 207 | 1.65e-34 | 135 |
MS.gene74568.t1 | AT4G11970 | 50.667 | 150 | 70 | 3 | 246 | 394 | 61 | 207 | 3.51e-33 | 133 |
MS.gene74568.t1 | AT4G11970 | 50.667 | 150 | 70 | 3 | 246 | 394 | 61 | 207 | 3.51e-33 | 133 |
MS.gene74568.t1 | AT4G11970 | 52.294 | 109 | 50 | 2 | 287 | 394 | 2 | 109 | 9.87e-23 | 99.4 |
MS.gene74568.t1 | AT4G11970 | 52.294 | 109 | 50 | 2 | 287 | 394 | 2 | 109 | 1.16e-22 | 98.6 |
MS.gene74568.t1 | AT1G27960 | 25.871 | 201 | 128 | 5 | 211 | 403 | 290 | 477 | 2.27e-13 | 73.6 |
MS.gene74568.t1 | AT1G27960 | 25.871 | 201 | 128 | 5 | 211 | 403 | 216 | 403 | 4.03e-13 | 72.8 |
MS.gene74568.t1 | AT1G55500 | 27.742 | 155 | 102 | 2 | 246 | 394 | 401 | 551 | 9.45e-13 | 72.0 |
MS.gene74568.t1 | AT1G55500 | 27.742 | 155 | 102 | 2 | 246 | 394 | 345 | 495 | 9.61e-13 | 71.6 |
MS.gene74568.t1 | AT1G55500 | 27.742 | 155 | 102 | 2 | 246 | 394 | 388 | 538 | 1.01e-12 | 71.6 |
MS.gene74568.t1 | AT1G55500 | 27.742 | 155 | 102 | 2 | 246 | 394 | 401 | 551 | 1.01e-12 | 71.6 |
MS.gene74568.t1 | AT1G55500 | 27.742 | 155 | 102 | 2 | 246 | 394 | 401 | 551 | 1.04e-12 | 71.6 |
MS.gene74568.t1 | AT1G55500 | 27.742 | 155 | 102 | 2 | 246 | 394 | 358 | 508 | 1.05e-12 | 71.6 |
MS.gene74568.t1 | AT3G13460 | 24.638 | 207 | 142 | 3 | 198 | 394 | 376 | 578 | 3.07e-12 | 70.5 |
MS.gene74568.t1 | AT3G13460 | 24.638 | 207 | 142 | 3 | 198 | 394 | 374 | 576 | 3.25e-12 | 70.1 |
MS.gene74568.t1 | AT3G13460 | 24.638 | 207 | 142 | 3 | 198 | 394 | 377 | 579 | 3.26e-12 | 70.1 |
MS.gene74568.t1 | AT5G61020 | 23.301 | 206 | 144 | 4 | 197 | 394 | 197 | 396 | 3.74e-11 | 66.6 |
MS.gene74568.t1 | AT5G61020 | 23.301 | 206 | 144 | 4 | 197 | 394 | 199 | 398 | 4.36e-11 | 66.2 |
Find 224 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTAGGTTCGGTGGTGATTT+TGG | 0.093023 | 2.3:-60012210 | MS.gene74568:CDS |
TCCTGGACGCGGTCCATTTA+TGG | 0.214541 | 2.3:-60012103 | MS.gene74568:CDS |
TCTTCAAATGGGACAATATC+TGG | 0.215787 | 2.3:+60012504 | None:intergenic |
AGAATTGGTGGTTCTGTTGC+TGG | 0.242654 | 2.3:-60015883 | MS.gene74568:CDS |
ATGTTTCCCGGTGGTGGATT+TGG | 0.262536 | 2.3:-60012138 | MS.gene74568:CDS |
TGTTTCCCGGTGGTGGATTT+GGG | 0.276865 | 2.3:-60012137 | MS.gene74568:CDS |
GGCATGGGTCCCCGAGGTTT+TGG | 0.279783 | 2.3:-60012243 | MS.gene74568:CDS |
TGATGTTCGATTGGCTTGAT+TGG | 0.286468 | 2.3:+60018416 | None:intergenic |
TCTTCTTCATTGTCTTCAAA+TGG | 0.286902 | 2.3:+60012492 | None:intergenic |
CGGGGTGGAGACGGCGGCGG+TGG | 0.296415 | 2.3:+60022060 | None:intergenic |
CCTGGTGGACCCGATGGTTT+TGG | 0.305420 | 2.3:-60012282 | MS.gene74568:CDS |
TGTCTGTACAACAAGGAGTA+TGG | 0.310359 | 2.3:-60017344 | MS.gene74568:CDS |
ACCGGTAAGTTCTCATTGTA+TGG | 0.319343 | 2.3:+60014464 | None:intergenic |
TGCTTCTGCAGGTACAAGTT+AGG | 0.323400 | 2.3:-60018765 | MS.gene74568:intron |
GCTCATGGAACGGCACATTA+TGG | 0.324684 | 2.3:-60015844 | MS.gene74568:CDS |
AAGCGAGAATGCCGATTTGC+CGG | 0.329584 | 2.3:-60021853 | MS.gene74568:CDS |
TCGTCGACCGGGAGCATTAC+CGG | 0.337873 | 2.3:+60021961 | None:intergenic |
GGTGGAGACGGCGGCGGTGG+AGG | 0.346062 | 2.3:+60022063 | None:intergenic |
AGCAACAGAACCACCAATTC+TGG | 0.361324 | 2.3:+60015885 | None:intergenic |
CCTGGACGCGGTCCATTTAT+GGG | 0.362680 | 2.3:-60012102 | MS.gene74568:CDS |
TTTCCTGACTCTGTAACTAA+TGG | 0.362682 | 2.3:+60018519 | None:intergenic |
CATTGTATGGATTTCTCAAA+TGG | 0.375064 | 2.3:+60014477 | None:intergenic |
TCAAACCCTGGGATGTTTCC+CGG | 0.378883 | 2.3:-60012150 | MS.gene74568:CDS |
GTTGAACTTGTTGCTGCTGC+TGG | 0.379641 | 2.3:+60018493 | None:intergenic |
GAATTGGTGGTTCTGTTGCT+GGG | 0.384527 | 2.3:-60015882 | MS.gene74568:CDS |
TGAGCCAGATAGTGAACTTA+TGG | 0.387028 | 2.3:-60012950 | MS.gene74568:intron |
TAGATATTCCTTGAGGTAAA+GGG | 0.389373 | 2.3:+60018391 | None:intergenic |
CAACCGTACTCGACATTTCC+AGG | 0.391792 | 2.3:-60017244 | MS.gene74568:intron |
TGTGGTGGAGGTGGAGGTGG+TGG | 0.398389 | 2.3:+60012012 | None:intergenic |
CTACCACCTCTTGGTGCGTT+CGG | 0.404919 | 2.3:+60012060 | None:intergenic |
CTTCTTCATTGTCTTCAAAT+GGG | 0.407303 | 2.3:+60012493 | None:intergenic |
TATCGACAATCAGGCCCATT+AGG | 0.408920 | 2.3:+60018735 | None:intergenic |
CTCCCGGTCGACGAAGCTTC+CGG | 0.409834 | 2.3:-60021952 | MS.gene74568:CDS |
ATGGGCCTGATTGTCGATAT+AGG | 0.411252 | 2.3:-60018731 | MS.gene74568:CDS |
GCAGATAAGTAGAGATTGTC+AGG | 0.416631 | 2.3:-60013019 | MS.gene74568:intron |
CCTCTTGGTGCGTTCGGACC+TGG | 0.418017 | 2.3:+60012066 | None:intergenic |
CAAGGAAGAGGTAGGGGCAG+AGG | 0.419654 | 2.3:-60012408 | MS.gene74568:CDS |
TTGCCGGAAGCTTCGTCGAC+CGG | 0.420756 | 2.3:+60021949 | None:intergenic |
CTAGATATTCCTTGAGGTAA+AGG | 0.426065 | 2.3:+60018390 | None:intergenic |
AAGGGAGTGAATCCAGATAA+TGG | 0.426746 | 2.3:-60012537 | MS.gene74568:CDS |
TGCCAACTGCTCACCGATAG+AGG | 0.426963 | 2.3:+60012987 | None:intergenic |
GCATGCCTATATCGACAATC+AGG | 0.427943 | 2.3:+60018726 | None:intergenic |
TCTTGACTCTTACCCTGATC+TGG | 0.427989 | 2.3:+60011922 | None:intergenic |
GGTCCATATGGTCCTAGGTT+CGG | 0.430942 | 2.3:-60012222 | MS.gene74568:CDS |
CCTGGGATGTTTCCCGGTGG+TGG | 0.433343 | 2.3:-60012144 | MS.gene74568:CDS |
CGGAATGATAGGTATAGTTC+AGG | 0.433860 | 2.3:-60011946 | MS.gene74568:CDS |
GATGAAGAGGAGGAGAGCTT+TGG | 0.434723 | 2.3:-60012453 | MS.gene74568:CDS |
CAAGTGCAAAATCTTGCTAA+TGG | 0.435613 | 2.3:-60018444 | MS.gene74568:CDS |
CTCGGAACATCATGCCAGCT+GGG | 0.436761 | 2.3:+60012181 | None:intergenic |
GATGTTCGATTGGCTTGATT+GGG | 0.437627 | 2.3:+60018417 | None:intergenic |
CATACCATAAGTTCACTATC+TGG | 0.440113 | 2.3:+60012946 | None:intergenic |
TATAGTTAGAACCCCTTTGT+TGG | 0.441127 | 2.3:+60018610 | None:intergenic |
CTACCTCTTCCTTGAACAGC+TGG | 0.443773 | 2.3:+60012417 | None:intergenic |
CCTCGGAACATCATGCCAGC+TGG | 0.447772 | 2.3:+60012180 | None:intergenic |
GCAAAATTTCAATCCTCTGA+TGG | 0.449597 | 2.3:-60012325 | MS.gene74568:CDS |
TTTCTCTGTTAAGTGGTTGA+AGG | 0.452217 | 2.3:-60015815 | MS.gene74568:intron |
AAACCATTAGTTACAGAGTC+AGG | 0.456574 | 2.3:-60018522 | MS.gene74568:CDS |
TGAAGAACCTCTTCAATTGG+AGG | 0.457703 | 2.3:+60018684 | None:intergenic |
GTATAGTTCAGGACCAGATC+AGG | 0.461811 | 2.3:-60011935 | MS.gene74568:CDS |
GACCAAGTGATCGGAATGAT+AGG | 0.463237 | 2.3:-60011957 | MS.gene74568:CDS |
GACGTAATTTCTCTGTTAAG+TGG | 0.464059 | 2.3:-60015822 | MS.gene74568:CDS |
GCTGTAGGGCCAGCTGTTCA+AGG | 0.464279 | 2.3:-60012426 | MS.gene74568:CDS |
CCCATAAATGGACCGCGTCC+AGG | 0.465234 | 2.3:+60012102 | None:intergenic |
TCACAAGTTTAACCAACAAA+GGG | 0.465473 | 2.3:-60018622 | MS.gene74568:CDS |
GATCGGGGTGGAGACGGCGG+CGG | 0.465703 | 2.3:+60022057 | None:intergenic |
CGAGGTCGACCCTCAAACCC+TGG | 0.466597 | 2.3:-60012162 | MS.gene74568:CDS |
CTTTACCTCAAGGAATATCT+AGG | 0.467981 | 2.3:-60018389 | MS.gene74568:intron |
CCACCACCGGGAAACATCCC+AGG | 0.469211 | 2.3:+60012144 | None:intergenic |
CCTCACATGCATCTTGGGCG+TGG | 0.469309 | 2.3:-60012369 | MS.gene74568:CDS |
AAGTAGAGATTGTCAGGAGC+TGG | 0.471206 | 2.3:-60013013 | MS.gene74568:CDS |
AGACAATGAAGAAGAGGAAG+AGG | 0.471242 | 2.3:-60012484 | MS.gene74568:CDS |
TTGACTGGCCTACCACCTCT+TGG | 0.471572 | 2.3:+60012051 | None:intergenic |
CGGTGTGTCGTCACTGGCTA+AGG | 0.473431 | 2.3:-60021925 | MS.gene74568:CDS |
CGAGAAGAAGAGAAAGCAAA+GGG | 0.473546 | 2.3:-60012555 | MS.gene74568:CDS |
AGGAATCGGATTGGACGATC+GGG | 0.476823 | 2.3:+60022041 | None:intergenic |
AATTGTAAGAATATAAATGT+TGG | 0.477942 | 2.3:+60018655 | None:intergenic |
TCAATTGGAGGAGGAGGTCC+AGG | 0.478308 | 2.3:+60018696 | None:intergenic |
AGTGACGACACACCGTTTGC+CGG | 0.482207 | 2.3:+60021933 | None:intergenic |
TCCATACAATGAGAACTTAC+CGG | 0.482376 | 2.3:-60014465 | MS.gene74568:CDS |
ACCTCTTCAATTGGAGGAGG+AGG | 0.484094 | 2.3:+60018690 | None:intergenic |
GGGAAACATCCCAGGGTTTG+AGG | 0.491155 | 2.3:+60012152 | None:intergenic |
TTAGTTACAGAGTCAGGAAA+TGG | 0.494582 | 2.3:-60018516 | MS.gene74568:CDS |
AGTCGCGGTTGCTGCTCCAT+TGG | 0.498337 | 2.3:+60022006 | None:intergenic |
TGATACTGCATGTCATCATC+AGG | 0.498554 | 2.3:+60011877 | None:intergenic |
GGAAACATCCCAGGGTTTGA+GGG | 0.500927 | 2.3:+60012153 | None:intergenic |
TTCGATTGGCTTGATTGGGC+TGG | 0.502203 | 2.3:+60018421 | None:intergenic |
TGCCGGAAGCTTCGTCGACC+GGG | 0.502328 | 2.3:+60021950 | None:intergenic |
GAGTTGCAATCGTGAAAACT+TGG | 0.502415 | 2.3:-60017370 | MS.gene74568:CDS |
TTCAATCCTCTGATGGGCGA+TGG | 0.503316 | 2.3:-60012318 | MS.gene74568:CDS |
GGCAAACGGTGTGTCGTCAC+TGG | 0.503851 | 2.3:-60021931 | MS.gene74568:CDS |
TCGACGAAGCTTCCGGCAAA+CGG | 0.505502 | 2.3:-60021945 | MS.gene74568:CDS |
GGGCCAGCTGTTCAAGGAAG+AGG | 0.506255 | 2.3:-60012420 | MS.gene74568:CDS |
CCACCGAACCTAGGACCATA+TGG | 0.506705 | 2.3:+60012219 | None:intergenic |
GGAGGTGATTGCAGTGGCGG+CGG | 0.507353 | 2.3:+60022081 | None:intergenic |
TTGGACGATCGGGGTGGAGA+CGG | 0.508352 | 2.3:+60022051 | None:intergenic |
AGTCCTCAACTTCGATTTCG+AGG | 0.508501 | 2.3:-60022125 | MS.gene74568:CDS |
GCATACTAATGATGATATCA+AGG | 0.514229 | 2.3:-60021783 | MS.gene74568:CDS |
GAGAGCTTTGGTCAAGCTGT+AGG | 0.516424 | 2.3:-60012441 | MS.gene74568:CDS |
AGAGGAAGAAAGTGATGAAG+AGG | 0.516977 | 2.3:-60012466 | MS.gene74568:CDS |
GGAAGGTGGTAAGTAGGAAT+CGG | 0.518366 | 2.3:+60022027 | None:intergenic |
GGAAGAGGTAGGGGCAGAGG+AGG | 0.518803 | 2.3:-60012405 | MS.gene74568:CDS |
TAAAGGGGTTGATGTTCGAT+TGG | 0.521566 | 2.3:+60018407 | None:intergenic |
ACCATATGGACCAAAACCTC+GGG | 0.523745 | 2.3:+60012233 | None:intergenic |
TATAGGCATGCAAAATCTCC+TGG | 0.524122 | 2.3:-60018714 | MS.gene74568:CDS |
CTCAACTTCGATTTCGAGGG+CGG | 0.524533 | 2.3:-60022121 | MS.gene74568:CDS |
TAGGAATCGGATTGGACGAT+CGG | 0.525623 | 2.3:+60022040 | None:intergenic |
GTGATTGCAGTGGCGGCGGA+AGG | 0.526955 | 2.3:+60022085 | None:intergenic |
GCGGTTGCTGCTCCATTGGA+AGG | 0.529814 | 2.3:+60022010 | None:intergenic |
GGAAAAGATAATACCTTCAC+CGG | 0.531864 | 2.3:+60014446 | None:intergenic |
ATCTGGCATACCAAAACCAT+CGG | 0.531939 | 2.3:+60012272 | None:intergenic |
GCAAAGATGACATCCAGAAT+TGG | 0.534997 | 2.3:-60015898 | MS.gene74568:CDS |
CGTCGACCGGGAGCATTACC+GGG | 0.535042 | 2.3:+60021962 | None:intergenic |
ACGAGAAGAAGAGAAAGCAA+AGG | 0.536291 | 2.3:-60012556 | MS.gene74568:CDS |
CTCACAAGTTTAACCAACAA+AGG | 0.536291 | 2.3:-60018623 | MS.gene74568:CDS |
TCTGTTGCTGAACATACTCC+CGG | 0.537402 | 2.3:-60021980 | MS.gene74568:CDS |
TCTGCAAACCAAGGTGCGGT+TGG | 0.537410 | 2.3:-60018546 | MS.gene74568:CDS |
AATTGGTGGTTCTGTTGCTG+GGG | 0.537847 | 2.3:-60015881 | MS.gene74568:CDS |
CAAAATTTCAATCCTCTGAT+GGG | 0.538738 | 2.3:-60012324 | MS.gene74568:CDS |
GCTGTTCAAGGAAGAGGTAG+GGG | 0.539653 | 2.3:-60012414 | MS.gene74568:CDS |
GTCTGTACAACAAGGAGTAT+GGG | 0.539886 | 2.3:-60017343 | MS.gene74568:CDS |
CCAAAACCATCGGGTCCACC+AGG | 0.541684 | 2.3:+60012282 | None:intergenic |
CAGCTGTTCAAGGAAGAGGT+AGG | 0.542218 | 2.3:-60012416 | MS.gene74568:CDS |
GGAAGAAAGTGATGAAGAGG+AGG | 0.544461 | 2.3:-60012463 | MS.gene74568:CDS |
ATCGAAGTTGAGGACTCCTT+CGG | 0.545071 | 2.3:+60022132 | None:intergenic |
CCAAAATCACCACCGAACCT+AGG | 0.547709 | 2.3:+60012210 | None:intergenic |
ATTTGAAGACAATGAAGAAG+AGG | 0.549441 | 2.3:-60012490 | MS.gene74568:CDS |
TACGGACCTGGTGGACCCGA+TGG | 0.551614 | 2.3:-60012288 | MS.gene74568:CDS |
TCCTACTTACCACCTTCCAA+TGG | 0.551728 | 2.3:-60022022 | MS.gene74568:CDS |
TTTGGGATGATGATGAATCC+TGG | 0.551843 | 2.3:-60012120 | MS.gene74568:CDS |
TCCATTGGAAGGTGGTAAGT+AGG | 0.552621 | 2.3:+60022021 | None:intergenic |
TACCTATCATTCCGATCACT+TGG | 0.553384 | 2.3:+60011955 | None:intergenic |
GTATGGAGAATGTCGTGAGC+AGG | 0.554911 | 2.3:-60021819 | MS.gene74568:CDS |
ACCCTCTATCGGTGAGCAGT+TGG | 0.555558 | 2.3:-60012989 | MS.gene74568:CDS |
TCTCCGTGTCTTGACCGCCT+AGG | 0.556999 | 2.3:+60011790 | None:intergenic |
CATCATCCCAAATCCACCAC+CGG | 0.557200 | 2.3:+60012131 | None:intergenic |
GAAAAGTCTCAGTTTCCTCA+AGG | 0.558709 | 2.3:-60018576 | MS.gene74568:CDS |
AGCTGTTCAAGGAAGAGGTA+GGG | 0.558892 | 2.3:-60012415 | MS.gene74568:CDS |
CACGCCCAAGATGCATGTGA+GGG | 0.559255 | 2.3:+60012370 | None:intergenic |
CAATGAGAACTTACCGGTGA+AGG | 0.559575 | 2.3:-60014459 | MS.gene74568:intron |
AAGACATGCTCAGTCAAAGT+GGG | 0.562941 | 2.3:-60011903 | MS.gene74568:CDS |
GGAAACTGGAAATATGCTCA+TGG | 0.564153 | 2.3:-60015859 | MS.gene74568:CDS |
CAGGAGCTGGAACCCTCTAT+CGG | 0.564912 | 2.3:-60013000 | MS.gene74568:CDS |
CTGGACGCGGTCCATTTATG+GGG | 0.566504 | 2.3:-60012101 | MS.gene74568:CDS |
GTGGTAAGTAGGAATCGGAT+TGG | 0.569036 | 2.3:+60022032 | None:intergenic |
GGTGGAGGTGGTGGAAACAT+CGG | 0.569998 | 2.3:+60012021 | None:intergenic |
CCACAAAATATGAACCGCAC+TGG | 0.571385 | 2.3:-60011994 | MS.gene74568:CDS |
AACATCGGAGGCATATTGAC+TGG | 0.571438 | 2.3:+60012036 | None:intergenic |
GACCATATGGACCAAAACCT+CGG | 0.572478 | 2.3:+60012232 | None:intergenic |
AGAGCTTTGGTCAAGCTGTA+GGG | 0.574219 | 2.3:-60012440 | MS.gene74568:CDS |
AAGGAGTATGGGCAACTCAA+AGG | 0.574768 | 2.3:-60017332 | MS.gene74568:CDS |
CCACGCCCAAGATGCATGTG+AGG | 0.577024 | 2.3:+60012369 | None:intergenic |
GGTGGAGGTGATTGCAGTGG+CGG | 0.577871 | 2.3:+60022078 | None:intergenic |
GTCCTCAACTTCGATTTCGA+GGG | 0.578584 | 2.3:-60022124 | MS.gene74568:CDS |
GAGATCAAAGACCAAGTGAT+CGG | 0.578889 | 2.3:-60011966 | MS.gene74568:CDS |
ATACCTGGAAATGTCGAGTA+CGG | 0.579334 | 2.3:+60017241 | None:intergenic |
AGAACCTCTTCAATTGGAGG+AGG | 0.582530 | 2.3:+60018687 | None:intergenic |
CATACTCCCGGTAATGCTCC+CGG | 0.583758 | 2.3:-60021968 | MS.gene74568:CDS |
TCGGAACATCATGCCAGCTG+GGG | 0.587325 | 2.3:+60012182 | None:intergenic |
TTTGCAGAATTAATTCCTTG+AGG | 0.587634 | 2.3:+60018561 | None:intergenic |
CAAGACATGCTCAGTCAAAG+TGG | 0.589412 | 2.3:-60011904 | MS.gene74568:CDS |
GCACCTAGGCGGTCAAGACA+CGG | 0.591297 | 2.3:-60011793 | MS.gene74568:CDS |
CGTGGAGCAAGACCGATCCA+TGG | 0.593454 | 2.3:-60012351 | MS.gene74568:CDS |
GACGATCGGGGTGGAGACGG+CGG | 0.596912 | 2.3:+60022054 | None:intergenic |
ATGGGCGATGGATTATCCTA+CGG | 0.597859 | 2.3:-60012306 | MS.gene74568:CDS |
TCTGGCATACCAAAACCATC+GGG | 0.598006 | 2.3:+60012273 | None:intergenic |
CTAAGGAGTTTGTGTATGAA+AGG | 0.598009 | 2.3:-60021908 | MS.gene74568:CDS |
TATAGTTCAGGACCAGATCA+GGG | 0.598515 | 2.3:-60011934 | MS.gene74568:CDS |
CGATAGTGAAAGTGAAGATG+AGG | 0.599130 | 2.3:-60011815 | MS.gene74568:CDS |
GAGGTCGACCCTCAAACCCT+GGG | 0.599761 | 2.3:-60012161 | MS.gene74568:CDS |
AGATATTCCTTGAGGTAAAG+GGG | 0.599791 | 2.3:+60018392 | None:intergenic |
CGCCCAAGATGCATGTGAGG+GGG | 0.601403 | 2.3:+60012372 | None:intergenic |
CGCCCTCGAAATCGAAGTTG+AGG | 0.602456 | 2.3:+60022122 | None:intergenic |
GGAGTATGTTCAGCAACAGA+TGG | 0.603973 | 2.3:+60021983 | None:intergenic |
ATCTGGCTCAGTATATAGCA+AGG | 0.604895 | 2.3:+60012963 | None:intergenic |
TTCCAAATGGAGGATTCCGA+AGG | 0.608048 | 2.3:-60022148 | None:intergenic |
ACCTCCTCCTCCAATTGAAG+AGG | 0.608458 | 2.3:-60018691 | MS.gene74568:CDS |
GGATTATCCTACGGACCTGG+TGG | 0.610357 | 2.3:-60012297 | MS.gene74568:CDS |
AAATGAAGCATTCGACTCTG+TGG | 0.611269 | 2.3:-60017292 | MS.gene74568:CDS |
GATAATCCATCGCCCATCAG+AGG | 0.611995 | 2.3:+60012312 | None:intergenic |
CCATATGGTCCTAGGTTCGG+TGG | 0.617418 | 2.3:-60012219 | MS.gene74568:CDS |
ACAAGTCACAGCAAGATGAT+CGG | 0.617719 | 2.3:-60011843 | MS.gene74568:CDS |
CCAGCTGGCATGATGTTCCG+AGG | 0.617820 | 2.3:-60012180 | MS.gene74568:CDS |
ACGCCCAAGATGCATGTGAG+GGG | 0.617863 | 2.3:+60012371 | None:intergenic |
GCCAACTGCTCACCGATAGA+GGG | 0.624592 | 2.3:+60012988 | None:intergenic |
ACATCAACCCCTTTACCTCA+AGG | 0.625692 | 2.3:-60018399 | MS.gene74568:CDS |
GTATGAAAGGTGAAGCGTGT+GGG | 0.626726 | 2.3:-60021895 | MS.gene74568:CDS |
CAGGGTTTGAGGGTCGACCT+CGG | 0.627119 | 2.3:+60012163 | None:intergenic |
CGAACGCACCAAGAGGTGGT+AGG | 0.627845 | 2.3:-60012059 | MS.gene74568:CDS |
ATCATCCCAAATCCACCACC+GGG | 0.628611 | 2.3:+60012132 | None:intergenic |
GGAGGTGGTGGAAACATCGG+AGG | 0.628646 | 2.3:+60012024 | None:intergenic |
AAGATGACATCCAGAATTGG+TGG | 0.629196 | 2.3:-60015895 | MS.gene74568:CDS |
GATGGATTATCCTACGGACC+TGG | 0.631297 | 2.3:-60012300 | MS.gene74568:CDS |
CGGAACATCATGCCAGCTGG+GGG | 0.631408 | 2.3:+60012183 | None:intergenic |
CTGGAAATATGCTCATGGAA+CGG | 0.636269 | 2.3:-60015854 | MS.gene74568:CDS |
AGACATGCTCAGTCAAAGTG+GGG | 0.641645 | 2.3:-60011902 | MS.gene74568:CDS |
ATTGGTGGTTCTGTTGCTGG+GGG | 0.642974 | 2.3:-60015880 | MS.gene74568:CDS |
GGTCCGAACGCACCAAGAGG+TGG | 0.645123 | 2.3:-60012063 | MS.gene74568:CDS |
ATCGGATTGGACGATCGGGG+TGG | 0.646967 | 2.3:+60022045 | None:intergenic |
GGAATTAATTCTGCAAACCA+AGG | 0.649467 | 2.3:-60018555 | MS.gene74568:CDS |
GGCGGTGGAGGTGATTGCAG+TGG | 0.649508 | 2.3:+60022075 | None:intergenic |
GGAATCGGATTGGACGATCG+GGG | 0.649563 | 2.3:+60022042 | None:intergenic |
TAATTCTGCAAACCAAGGTG+CGG | 0.649941 | 2.3:-60018550 | MS.gene74568:CDS |
TAGGCGGTCAAGACACGGAG+AGG | 0.652708 | 2.3:-60011788 | MS.gene74568:CDS |
ATCGGGTCCACCAGGTCCGT+AGG | 0.656280 | 2.3:+60012290 | None:intergenic |
CACAAGTTTAACCAACAAAG+GGG | 0.657204 | 2.3:-60018621 | MS.gene74568:CDS |
CCAGGTCCGAACGCACCAAG+AGG | 0.659891 | 2.3:-60012066 | MS.gene74568:CDS |
TTCAGCAACAGATGGAGTCG+CGG | 0.661796 | 2.3:+60021991 | None:intergenic |
AAAGTGAAGATGAGGCACCT+AGG | 0.663202 | 2.3:-60011807 | MS.gene74568:CDS |
GTTGCTGCTCCATTGGAAGG+TGG | 0.663759 | 2.3:+60022013 | None:intergenic |
TGTATGAAAGGTGAAGCGTG+TGG | 0.667628 | 2.3:-60021896 | MS.gene74568:CDS |
TGGACGCGGTCCATTTATGG+GGG | 0.669773 | 2.3:-60012100 | MS.gene74568:CDS |
GATGACATGCAGTATCAGCA+AGG | 0.670720 | 2.3:-60011871 | MS.gene74568:CDS |
GGGGCAGAGGAGGTATGATG+TGG | 0.674845 | 2.3:-60012395 | MS.gene74568:CDS |
CACCACCGGGAAACATCCCA+GGG | 0.675625 | 2.3:+60012145 | None:intergenic |
AGGCGGTCAAGACACGGAGA+GGG | 0.684082 | 2.3:-60011787 | MS.gene74568:CDS |
TTGGAGTTGTCTGTACAACA+AGG | 0.692074 | 2.3:-60017351 | MS.gene74568:CDS |
AACCCTGGGATGTTTCCCGG+TGG | 0.692839 | 2.3:-60012147 | MS.gene74568:CDS |
GACATGCTCAGTCAAAGTGG+GGG | 0.694693 | 2.3:-60011901 | MS.gene74568:CDS |
GGACGCGGTCCATTTATGGG+GGG | 0.697444 | 2.3:-60012099 | MS.gene74568:CDS |
ATGATGATGAATCCTGGACG+CGG | 0.713076 | 2.3:-60012114 | MS.gene74568:CDS |
ACACACCTAGATATTCCTTG+AGG | 0.718712 | 2.3:+60018384 | None:intergenic |
GGAGTGAATCCAGATAATGG+AGG | 0.727786 | 2.3:-60012534 | MS.gene74568:CDS |
GTGAAGATGAGGCACCTAGG+CGG | 0.740940 | 2.3:-60011804 | MS.gene74568:CDS |
CCATATGGACCAAAACCTCG+GGG | 0.759985 | 2.3:+60012234 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 60011762 | 60022164 | 60011762 | ID=MS.gene74568 |
chr2.3 | mRNA | 60011762 | 60022164 | 60011762 | ID=MS.gene74568.t1;Parent=MS.gene74568 |
chr2.3 | exon | 60021773 | 60022164 | 60021773 | ID=MS.gene74568.t1.exon1;Parent=MS.gene74568.t1 |
chr2.3 | CDS | 60021773 | 60022164 | 60021773 | ID=cds.MS.gene74568.t1;Parent=MS.gene74568.t1 |
chr2.3 | exon | 60018390 | 60018776 | 60018390 | ID=MS.gene74568.t1.exon2;Parent=MS.gene74568.t1 |
chr2.3 | CDS | 60018390 | 60018776 | 60018390 | ID=cds.MS.gene74568.t1;Parent=MS.gene74568.t1 |
chr2.3 | exon | 60017245 | 60017407 | 60017245 | ID=MS.gene74568.t1.exon3;Parent=MS.gene74568.t1 |
chr2.3 | CDS | 60017245 | 60017407 | 60017245 | ID=cds.MS.gene74568.t1;Parent=MS.gene74568.t1 |
chr2.3 | exon | 60015816 | 60015926 | 60015816 | ID=MS.gene74568.t1.exon4;Parent=MS.gene74568.t1 |
chr2.3 | CDS | 60015816 | 60015926 | 60015816 | ID=cds.MS.gene74568.t1;Parent=MS.gene74568.t1 |
chr2.3 | exon | 60014460 | 60014528 | 60014460 | ID=MS.gene74568.t1.exon5;Parent=MS.gene74568.t1 |
chr2.3 | CDS | 60014460 | 60014528 | 60014460 | ID=cds.MS.gene74568.t1;Parent=MS.gene74568.t1 |
chr2.3 | exon | 60012951 | 60013037 | 60012951 | ID=MS.gene74568.t1.exon6;Parent=MS.gene74568.t1 |
chr2.3 | CDS | 60012951 | 60013037 | 60012951 | ID=cds.MS.gene74568.t1;Parent=MS.gene74568.t1 |
chr2.3 | exon | 60011762 | 60012604 | 60011762 | ID=MS.gene74568.t1.exon7;Parent=MS.gene74568.t1 |
chr2.3 | CDS | 60011762 | 60012604 | 60011762 | ID=cds.MS.gene74568.t1;Parent=MS.gene74568.t1 |
Gene Sequence |
Protein sequence |