AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene74598

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74598.t1 MTR_2g028950 97.963 589 10 1 1 587 1 589 0.0 1179
MS.gene74598.t1 MTR_2g028950 98.008 502 8 1 1 500 1 502 0.0 1008
MS.gene74598.t1 MTR_5g090770 59.206 554 214 4 21 567 23 571 0.0 667
MS.gene74598.t1 MTR_5g090770 60.095 421 159 3 21 434 23 441 1.05e-176 508
MS.gene74598.t1 MTR_2g039880 44.112 569 280 12 9 564 15 558 2.22e-141 422
MS.gene74598.t1 MTR_7g090020 34.545 385 223 10 42 401 6 386 1.42e-46 171
MS.gene74598.t1 MTR_1g051025 32.812 384 230 9 42 401 6 385 2.13e-44 165
MS.gene74598.t1 MTR_3g102610 52.542 118 20 3 187 302 40 123 3.31e-23 95.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74598.t1 AT5G45110 62.039 569 195 7 1 559 1 558 0.0 676
MS.gene74598.t1 AT4G19660 60.406 591 199 11 2 580 3 570 0.0 647
MS.gene74598.t1 AT4G19660 57.767 618 199 12 2 580 3 597 0.0 632
MS.gene74598.t1 AT5G45110 60.762 525 186 7 1 519 1 511 0.0 605
MS.gene74598.t1 AT1G64280 40.602 532 298 7 39 562 42 563 1.35e-125 382
MS.gene74598.t1 AT4G26120 40.700 543 300 10 39 573 45 573 1.42e-123 377
MS.gene74598.t1 AT4G26120 40.700 543 300 10 39 573 44 572 1.49e-123 377
MS.gene74598.t1 AT3G57130 33.858 381 227 8 42 401 8 384 3.11e-50 180
MS.gene74598.t1 AT2G41370 33.756 394 227 10 37 401 3 391 4.81e-47 172
MS.gene74598.t1 AT3G57130 30.769 156 98 3 42 188 8 162 2.06e-16 78.2

Find 135 sgRNAs with CRISPR-Local

Find 308 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTGACTCTTTGCTCTTCT+TGG 0.133695 2.3:-60506831 None:intergenic
TGCAATGTCCATGGCTAATT+TGG 0.171363 2.3:-60506310 None:intergenic
GAACAAGCTGAGTTCTAATT+TGG 0.195265 2.3:+60502933 MS.gene74598:CDS
ATTGATTCTGATTATGATTA+TGG 0.207555 2.3:+60502967 MS.gene74598:CDS
AAAACAAGAGACTTATTTCT+AGG 0.255152 2.3:+60506430 MS.gene74598:CDS
TACCCCTCTTAAATATTTCA+TGG 0.278681 2.3:-60503065 None:intergenic
AAGGTTGTTTCTGAAGTTCT+TGG 0.286176 2.3:+60504511 MS.gene74598:CDS
ATCCGAGTTTGCTGGTCTTT+CGG 0.306284 2.3:+60506347 MS.gene74598:CDS
CTTGACTCTTTGCTCTTCTT+GGG 0.320433 2.3:-60506830 None:intergenic
TCGAGCACTTCCGAGCAATT+AGG 0.321539 2.3:-60506757 None:intergenic
TCTCAAAATAATGGCTAATT+CGG 0.322919 2.3:+60502795 None:intergenic
TTTAAGAGGGGTAAAGATAA+AGG 0.330980 2.3:+60503075 MS.gene74598:CDS
TGAAGTTCTTGGATTGGGTT+TGG 0.339158 2.3:+60504522 MS.gene74598:CDS
AGACGTCTTCTTAACTTTGT+AGG 0.350294 2.3:+60504130 MS.gene74598:CDS
TGTAACATACAGACTCTCTA+AGG 0.352554 2.3:-60506957 None:intergenic
GTTTCTGAAGTTCTTGGATT+GGG 0.355904 2.3:+60504517 MS.gene74598:CDS
AAAATTCATCGGTGCATTCT+AGG 0.360553 2.3:+60503024 MS.gene74598:CDS
CGAGCATGATCGGAGCCATT+AGG 0.362185 2.3:-60502889 None:intergenic
AGGGCATATGTTGTGACTAA+TGG 0.365492 2.3:-60502869 None:intergenic
ATCGGTGCATTCTAGGTTCT+AGG 0.371950 2.3:+60503031 MS.gene74598:CDS
TATCATTGTGGAGGGAATTC+CGG 0.388694 2.3:+60502999 MS.gene74598:CDS
AAAGCTGAGTTTAGTCGCTC+TGG 0.402143 2.3:+60506907 MS.gene74598:CDS
TGTTTCTGAAGTTCTTGGAT+TGG 0.410365 2.3:+60504516 MS.gene74598:CDS
AATTCCCTCCACAATGATAT+CGG 0.420705 2.3:-60502995 None:intergenic
TCCACAGCAAAATTAATTGC+AGG 0.431240 2.3:-60503276 None:intergenic
TTCTCAAGGTAAAACAAATC+AGG 0.437786 2.3:-60506802 None:intergenic
TTGAGCGATTTGTTGCCTTA+TGG 0.438180 2.3:+60503132 MS.gene74598:CDS
AGTCACAACATATGCCCTAA+TGG 0.443721 2.3:+60502874 MS.gene74598:CDS
GCTCCGCCGCGACCTTCATC+AGG 0.443936 2.3:+60504315 MS.gene74598:CDS
ATGGAGGCCCTGATGAAAAC+AGG 0.445853 2.3:+60506453 MS.gene74598:CDS
GCTCTTTCTCAATTGAGATC+TGG 0.446362 2.3:-60504261 None:intergenic
GGAAGTGCTCGACAAGTTCA+TGG 0.446634 2.3:+60506768 MS.gene74598:CDS
TAGTATCGCTTCTTACGAAA+GGG 0.448428 2.3:+60504620 MS.gene74598:CDS
TCATCTTCGCACTTGTCAAA+TGG 0.450698 2.3:+60502844 MS.gene74598:CDS
GTGGTGGGTGTCAGTCGAGA+TGG 0.451143 2.3:+60506720 MS.gene74598:intron
AGAGTGCTGTTAGTATTTGT+AGG 0.451754 2.3:+60504674 MS.gene74598:CDS
GACGTCTTCTTAACTTTGTA+GGG 0.452305 2.3:+60504131 MS.gene74598:CDS
GAGACAACATCCGAGTTTGC+TGG 0.452844 2.3:+60506339 MS.gene74598:CDS
AGAACTTCAGAAACAACCTT+AGG 0.452990 2.3:-60504508 None:intergenic
TCATAACCAACTTTGCCATA+AGG 0.458550 2.3:-60503147 None:intergenic
GCTGGTCTTTCGGCATCAAA+AGG 0.459478 2.3:+60506357 MS.gene74598:CDS
AGAAGCGATACTATAATTGA+AGG 0.460936 2.3:-60504610 None:intergenic
CTCGAGGTTACGAGCATGAT+CGG 0.461902 2.3:-60502899 None:intergenic
GAGCATGATCGGAGCCATTA+GGG 0.467051 2.3:-60502888 None:intergenic
TGGTGGGTGTCAGTCGAGAT+GGG 0.469353 2.3:+60506721 MS.gene74598:intron
GTTTGGCTAATGTCAATCTT+CGG 0.472297 2.3:+60504539 MS.gene74598:CDS
AAAGGATTGTCGAAGAATGA+AGG 0.474320 2.3:+60503093 MS.gene74598:CDS
CTTTGTAGGGAAGGCTCTTG+TGG 0.482823 2.3:+60504144 MS.gene74598:CDS
TGCCACTCTGTCAACACATT+GGG 0.488312 2.3:-60504224 None:intergenic
CAAGAGACTTATTTCTAGGA+TGG 0.490241 2.3:+60506434 MS.gene74598:CDS
CTTCTTGGGTGCCCTTCTCA+AGG 0.494673 2.3:-60506816 None:intergenic
GACATTACTTTAGATGAAGC+TGG 0.496309 2.3:+60504454 MS.gene74598:CDS
AGGTTCAAACGGAAACTTAA+GGG 0.497387 2.3:+60506377 MS.gene74598:CDS
TTTCCATGAAATATTTAAGA+GGG 0.500978 2.3:+60503062 MS.gene74598:CDS
TTGTTGCCTTATGGCAAAGT+TGG 0.501023 2.3:+60503141 MS.gene74598:CDS
AAGGTTCAAACGGAAACTTA+AGG 0.501661 2.3:+60506376 MS.gene74598:CDS
AGGGACAAAGTGTCCACTAC+AGG 0.502128 2.3:-60504355 None:intergenic
AGAAATGCGAAGGAATCCTT+TGG 0.503336 2.3:+60504786 MS.gene74598:CDS
TTCTTGAGCTATGCATATAG+TGG 0.505104 2.3:+60503183 MS.gene74598:CDS
TACGAAAGGGGCTTGTGCAT+CGG 0.506556 2.3:+60504633 MS.gene74598:CDS
CAAGAACATCAATGCATATC+CGG 0.508900 2.3:-60504759 None:intergenic
TCGGCATCAAAAGGTTCAAA+CGG 0.510189 2.3:+60506366 MS.gene74598:CDS
GCATCGGATTTGACTTTCGA+TGG 0.514017 2.3:+60504649 MS.gene74598:CDS
ATAGTATCGCTTCTTACGAA+AGG 0.524638 2.3:+60504619 MS.gene74598:CDS
AAGCTGAGTTTAGTCGCTCT+GGG 0.526051 2.3:+60506908 MS.gene74598:CDS
TGCCGAAAGACCAGCAAACT+CGG 0.526961 2.3:-60506349 None:intergenic
CACTAGAATTCACAAGGCAT+TGG 0.529760 2.3:+60504387 MS.gene74598:CDS
ATGGCTAATTTGGCTTCCAA+AGG 0.534107 2.3:-60506300 None:intergenic
GCGCTACTTTCCTAATTGCT+CGG 0.534492 2.3:+60506747 MS.gene74598:CDS
CTCTGCACGTGCAATGTCCA+TGG 0.539317 2.3:-60506319 None:intergenic
TGGCTAATTTGGCTTCCAAA+GGG 0.539806 2.3:-60506299 None:intergenic
TCACATTGCTGCCATGCGTA+AGG 0.540227 2.3:+60504585 MS.gene74598:CDS
CGAGTTGATTCAATTGACAA+TGG 0.543054 2.3:-60504198 None:intergenic
CACAGTGGGCTACTGCATAG+TGG 0.545838 2.3:-60504483 None:intergenic
TCTTCTTAACTTTGTAGGGA+AGG 0.546009 2.3:+60504135 MS.gene74598:CDS
CATCATCCTGATGAAGGTCG+CGG 0.548121 2.3:-60504321 None:intergenic
ACACATGTAGACACCTCCAT+TGG 0.548193 2.3:-60503222 None:intergenic
AGTAGCCCACTGTGACCCTA+AGG 0.552063 2.3:+60504492 MS.gene74598:CDS
AGATGTCATTTCAATCCTCA+TGG 0.554111 2.3:+60504168 MS.gene74598:CDS
GGAAAGAAACAAATAAAGAC+CGG 0.554242 2.3:+60504740 MS.gene74598:CDS
GAACTTCAGAAACAACCTTA+GGG 0.555444 2.3:-60504507 None:intergenic
GTCAATCTTCGGAATTCTCG+AGG 0.563292 2.3:+60504550 MS.gene74598:CDS
GATGTATTATTGCTCAAAGA+GGG 0.566332 2.3:-60502823 None:intergenic
GTGCCACTCTGTCAACACAT+TGG 0.567094 2.3:-60504225 None:intergenic
GGGTGTCAGTCGAGATGGGG+CGG 0.570433 2.3:+60506725 MS.gene74598:intron
TCACCATACCTCTGTTCTCA+AGG 0.571825 2.3:-60504870 None:intergenic
TAGAGAGTCTGTATGTTACA+AGG 0.574111 2.3:+60506960 MS.gene74598:CDS
AAGGATTGTCGAAGAATGAA+GGG 0.575680 2.3:+60503094 MS.gene74598:CDS
TGTTGACAGAGTGGCACGAT+CGG 0.578105 2.3:+60504231 MS.gene74598:CDS
GTGCTGTTAGTATTTGTAGG+AGG 0.578982 2.3:+60504677 MS.gene74598:CDS
TTTGGAAGCCAAATTAGCCA+TGG 0.582434 2.3:+60506302 MS.gene74598:CDS
TAGGAGGTTGACGAGGCCAA+AGG 0.585498 2.3:+60504693 MS.gene74598:CDS
TTCCATGAAATATTTAAGAG+GGG 0.588302 2.3:+60503063 MS.gene74598:CDS
AAGAAGAGCAAAGAGTCAAG+AGG 0.588632 2.3:+60506833 MS.gene74598:CDS
TAAACTTAAACCCTCTCCAA+TGG 0.595072 2.3:+60503206 MS.gene74598:CDS
TGATGTATTATTGCTCAAAG+AGG 0.595361 2.3:-60502824 None:intergenic
GGTGGGTGTCAGTCGAGATG+GGG 0.597335 2.3:+60506722 MS.gene74598:intron
AGACTCTCTAAGGGATGAAG+AGG 0.598944 2.3:-60506947 None:intergenic
GAGACTTATTTCTAGGATGG+AGG 0.602102 2.3:+60506437 MS.gene74598:CDS
AGTATCGCTTCTTACGAAAG+GGG 0.605200 2.3:+60504621 MS.gene74598:CDS
TGGAAAAGTGATACCAACTC+TGG 0.609116 2.3:-60503330 None:intergenic
GTTTGTGCTCATGATGCTTG+CGG 0.612341 2.3:+60503252 MS.gene74598:CDS
TTCTTGAAAGAGAAATGCGA+AGG 0.612843 2.3:+60504776 MS.gene74598:CDS
GAATTCCGGTGAAAATTCAT+CGG 0.614156 2.3:+60503013 MS.gene74598:CDS
TCTCAATTGAGATCTGGTCA+AGG 0.616130 2.3:-60504255 None:intergenic
CAAGGTACAAAAGCTTCATG+TGG 0.618221 2.3:-60504852 None:intergenic
CTCTGTGTCTTCCCACACAG+TGG 0.626716 2.3:+60504819 MS.gene74598:CDS
CAAGGTAAAACAAATCAGGT+AGG 0.633426 2.3:-60506798 None:intergenic
AATTGAAGGCTCCTTACGCA+TGG 0.634465 2.3:-60504596 None:intergenic
GTAGACACCTCCATTGGAGA+GGG 0.634552 2.3:-60503216 None:intergenic
GTAACATACAGACTCTCTAA+GGG 0.634970 2.3:-60506956 None:intergenic
TGAAAACGATGCTCCTGTAG+TGG 0.635923 2.3:+60504342 MS.gene74598:CDS
ACTTAAACCCTCTCCAATGG+AGG 0.636356 2.3:+60503209 MS.gene74598:CDS
TGTTCAAACTTATAACCTCG+AGG 0.641337 2.3:-60502915 None:intergenic
ACAGAGGGATCTGTAGCCAA+AGG 0.651194 2.3:-60504802 None:intergenic
AACAACCTTAGGGTCACAGT+GGG 0.652928 2.3:-60504497 None:intergenic
TCAATCTTCGGAATTCTCGA+GGG 0.655049 2.3:+60504551 MS.gene74598:CDS
GCTTAAAGATGATGTCAACA+AGG 0.657265 2.3:+60506870 MS.gene74598:CDS
ACGAATCACTAGAATTCACA+AGG 0.672729 2.3:+60504381 MS.gene74598:CDS
GACAATGGAAAGCAACCATG+AGG 0.674409 2.3:-60504183 None:intergenic
CACTGTGTGGGAAGACACAG+AGG 0.675475 2.3:-60504818 None:intergenic
TGTAGACACCTCCATTGGAG+AGG 0.677893 2.3:-60503217 None:intergenic
TGCCCAATGTGTTGACAGAG+TGG 0.682710 2.3:+60504222 MS.gene74598:CDS
TTCAAACGGAAACTTAAGGG+AGG 0.682937 2.3:+60506380 MS.gene74598:CDS
GTATTTGTAGGAGGTTGACG+AGG 0.688711 2.3:+60504686 MS.gene74598:CDS
TGATGCCGATATCATTGTGG+AGG 0.689812 2.3:+60502990 MS.gene74598:CDS
GAGATCATCAGCCACTGTGT+GGG 0.692384 2.3:-60504830 None:intergenic
CGATCATGCTCGTAACCTCG+AGG 0.695662 2.3:+60502900 MS.gene74598:CDS
GGAGATCATCAGCCACTGTG+TGG 0.705139 2.3:-60504831 None:intergenic
TGGTGATGCCGATATCATTG+TGG 0.710168 2.3:+60502987 MS.gene74598:CDS
GATGCCGATATCATTGTGGA+GGG 0.714650 2.3:+60502991 MS.gene74598:CDS
AAACAACCTTAGGGTCACAG+TGG 0.718165 2.3:-60504498 None:intergenic
ACTGTGTGGGAAGACACAGA+GGG 0.734076 2.3:-60504817 None:intergenic
CATCCTGATGAAGGTCGCGG+CGG 0.747920 2.3:-60504318 None:intergenic
AGTGCTCGACAAGTTCATGG+AGG 0.770013 2.3:+60506771 MS.gene74598:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAAAAAAAAAAAAA+AGG - chr2.3:60506093-60506112 None:intergenic 0.0%
!!! CTTTTATTTTTGAAGTATTT+GGG + chr2.3:60503630-60503649 MS.gene74598:intron 15.0%
!!! TATTATTATCAGATACTTTT+TGG + chr2.3:60503550-60503569 MS.gene74598:intron 15.0%
!!! TCTTTTATTTTTGAAGTATT+TGG + chr2.3:60503629-60503648 MS.gene74598:intron 15.0%
!!! TTTTAAACAATATTTTCCTA+AGG - chr2.3:60505621-60505640 None:intergenic 15.0%
!!! TTTTTTAAATTTTCTGTTTC+AGG + chr2.3:60506106-60506125 MS.gene74598:intron 15.0%
!! AAACAAAAAAACTCCAAAAT+GGG - chr2.3:60505080-60505099 None:intergenic 20.0%
!! AAGAACCACTTAAAATTTAT+GGG + chr2.3:60505118-60505137 MS.gene74598:intron 20.0%
!! AGTTCAAAATTACATAAAGT+TGG - chr2.3:60505242-60505261 None:intergenic 20.0%
!! ATAATATAGAGAAAACAGAA+AGG - chr2.3:60503702-60503721 None:intergenic 20.0%
!! ATATAGAAAAATGTTCAAGT+GGG - chr2.3:60503677-60503696 None:intergenic 20.0%
!! GGAATAATTAATTATCTGTT+AGG + chr2.3:60503741-60503760 MS.gene74598:intron 20.0%
!! TATTTAATAGTATCCTCTTA+TGG + chr2.3:60506493-60506512 MS.gene74598:intron 20.0%
!! TTTCCATGAAATATTTAAGA+GGG + chr2.3:60503062-60503081 MS.gene74598:CDS 20.0%
!!! ATGAAATTTAGTTCAAGTTT+AGG + chr2.3:60503720-60503739 MS.gene74598:intron 20.0%
!!! ATTGATTCTGATTATGATTA+TGG + chr2.3:60502967-60502986 MS.gene74598:CDS 20.0%
!!! GTATAGTAAGAAATTTGTTT+TGG - chr2.3:60503879-60503898 None:intergenic 20.0%
!!! TAAGAAATTTGTTTTGGAAA+AGG - chr2.3:60503873-60503892 None:intergenic 20.0%
!!! TTACTTTTGTTGATTTTGAA+GGG + chr2.3:60503927-60503946 MS.gene74598:intron 20.0%
!!! TTTACTTTTGTTGATTTTGA+AGG + chr2.3:60503926-60503945 MS.gene74598:intron 20.0%
!!! TTTTCCATGAAATATTTAAG+AGG + chr2.3:60503061-60503080 MS.gene74598:CDS 20.0%
! AATCATCATACAAAACATCT+TGG - chr2.3:60503785-60503804 None:intergenic 25.0%
! ATTTAGCTACAAATGAAACA+AGG - chr2.3:60505929-60505948 None:intergenic 25.0%
! CAAACAAAAAAACTCCAAAA+TGG - chr2.3:60505081-60505100 None:intergenic 25.0%
! CATATAGAAAAATGTTCAAG+TGG - chr2.3:60503678-60503697 None:intergenic 25.0%
! GAAGAACCACTTAAAATTTA+TGG + chr2.3:60505117-60505136 MS.gene74598:intron 25.0%
! TAGAATTGTACATAGAAACA+TGG - chr2.3:60506674-60506693 None:intergenic 25.0%
! TATAGAAAAATGTTCAAGTG+GGG - chr2.3:60503676-60503695 None:intergenic 25.0%
! TCATAGATATAATGTTTACC+TGG - chr2.3:60503353-60503372 None:intergenic 25.0%
! TTCCATGAAATATTTAAGAG+GGG + chr2.3:60503063-60503082 MS.gene74598:CDS 25.0%
!! AAAACAAAATGACTCAGTTT+TGG - chr2.3:60504996-60505015 None:intergenic 25.0%
!! AAAACAAGAGACTTATTTCT+AGG + chr2.3:60506430-60506449 MS.gene74598:CDS 25.0%
!! AAACAAAATGACTCAGTTTT+GGG - chr2.3:60504995-60505014 None:intergenic 25.0%
!! AAGATGTATTTGAGAAGTAT+TGG + chr2.3:60503498-60503517 MS.gene74598:intron 25.0%
!! AATTCTAGTGATTCGTTTTA+GGG - chr2.3:60504377-60504396 None:intergenic 25.0%
AAATCAATCAGAGAATCAGA+TGG - chr2.3:60506612-60506631 None:intergenic 30.0%
AATATAGCTTAGAGCATGAA+AGG + chr2.3:60505682-60505701 MS.gene74598:intron 30.0%
AGAAGCGATACTATAATTGA+AGG - chr2.3:60504613-60504632 None:intergenic 30.0%
AGTCATATTGTATCTGATCA+AGG + chr2.3:60504067-60504086 MS.gene74598:intron 30.0%
ATAGAAAAATGTTCAAGTGG+GGG - chr2.3:60503675-60503694 None:intergenic 30.0%
ATATAGCTTAGAGCATGAAA+GGG + chr2.3:60505683-60505702 MS.gene74598:intron 30.0%
ATTGTATCTGATCAAGGTTA+AGG + chr2.3:60504073-60504092 MS.gene74598:intron 30.0%
CAACTCTGGTATTTGAAAAA+TGG - chr2.3:60503319-60503338 None:intergenic 30.0%
CAATCTTACCTTGCAATTAA+AGG - chr2.3:60505490-60505509 None:intergenic 30.0%
CAGCAATGCTTATTATTTGA+TGG - chr2.3:60506247-60506266 None:intergenic 30.0%
CATAATTGGCATCTTATGTT+GGG + chr2.3:60504002-60504021 MS.gene74598:intron 30.0%
CCATATATCTTGCTTTCTTT+AGG + chr2.3:60503979-60503998 MS.gene74598:intron 30.0%
CCTAAAGAAAGCAAGATATA+TGG - chr2.3:60503982-60504001 None:intergenic 30.0%
CTAAAGTTTCATCTAGCAAA+AGG + chr2.3:60505347-60505366 MS.gene74598:intron 30.0%
CTGATTTACTATGTTTGTGT+TGG + chr2.3:60506204-60506223 MS.gene74598:intron 30.0%
GATGTATTATTGCTCAAAGA+GGG - chr2.3:60502826-60502845 None:intergenic 30.0%
GGAAAGAAACAAATAAAGAC+CGG + chr2.3:60504740-60504759 MS.gene74598:CDS 30.0%
TAAAACCTTCAGCAGAAAAT+TGG - chr2.3:60505394-60505413 None:intergenic 30.0%
TACCCCTCTTAAATATTTCA+TGG - chr2.3:60503068-60503087 None:intergenic 30.0%
TATCACACAAAAACAGAACA+GGG + chr2.3:60504718-60504737 MS.gene74598:CDS 30.0%
TCAGAGAATTTAGATAGTTC+TGG + chr2.3:60505261-60505280 MS.gene74598:intron 30.0%
TCTATTGTTAGTTAGACGTA+CGG + chr2.3:60503414-60503433 MS.gene74598:intron 30.0%
TGATGTATTATTGCTCAAAG+AGG - chr2.3:60502827-60502846 None:intergenic 30.0%
TGGTATTTGAAAAATGGAAG+AGG - chr2.3:60503313-60503332 None:intergenic 30.0%
TGTATGATGATTCAGAACAT+GGG + chr2.3:60503793-60503812 MS.gene74598:intron 30.0%
TTATCACACAAAAACAGAAC+AGG + chr2.3:60504717-60504736 MS.gene74598:CDS 30.0%
TTCATATGGCTGAAAAATTC+AGG + chr2.3:60506050-60506069 MS.gene74598:intron 30.0%
TTGCTTTCTTTAGGCATAAT+TGG + chr2.3:60503988-60504007 MS.gene74598:intron 30.0%
TTGTATGATGATTCAGAACA+TGG + chr2.3:60503792-60503811 MS.gene74598:intron 30.0%
TTTAAGAGGGGTAAAGATAA+AGG + chr2.3:60503075-60503094 MS.gene74598:CDS 30.0%
TTTGGGAAATTTCCATTCAA+AGG - chr2.3:60504978-60504997 None:intergenic 30.0%
! CGAAACCCATAAATTTTAAG+TGG - chr2.3:60505126-60505145 None:intergenic 30.0%
! GAATTCTAGTGATTCGTTTT+AGG - chr2.3:60504378-60504397 None:intergenic 30.0%
! GTTTTTGTGTGATAATCCTT+TGG - chr2.3:60504712-60504731 None:intergenic 30.0%
!! CATTTTTCAAATACCAGAGT+TGG + chr2.3:60503317-60503336 MS.gene74598:CDS 30.0%
!! TAGATAGTTCTGGAAATGTA+AGG + chr2.3:60505271-60505290 MS.gene74598:intron 30.0%
!! TGAATTTTTCAGCCATATGA+AGG - chr2.3:60506051-60506070 None:intergenic 30.0%
!!! AAGTCTCTTGTTTTGCATTA+TGG - chr2.3:60506424-60506443 None:intergenic 30.0%
!!! AGTCTCTTGTTTTGCATTAT+GGG - chr2.3:60506423-60506442 None:intergenic 30.0%
!!! GATTTGTTTTACCTTGAGAA+GGG + chr2.3:60506805-60506824 MS.gene74598:CDS 30.0%
AAAATTCATCGGTGCATTCT+AGG + chr2.3:60503024-60503043 MS.gene74598:CDS 35.0%
AAAGGATTGTCGAAGAATGA+AGG + chr2.3:60503093-60503112 MS.gene74598:CDS 35.0%
AAGGATTGTCGAAGAATGAA+GGG + chr2.3:60503094-60503113 MS.gene74598:CDS 35.0%
AAGGTTCAAACGGAAACTTA+AGG + chr2.3:60506376-60506395 MS.gene74598:CDS 35.0%
AATAAAGCTGGCAAATCCAA+TGG - chr2.3:60505194-60505213 None:intergenic 35.0%
AATACCAGCATAAACAAGAC+AGG - chr2.3:60506132-60506151 None:intergenic 35.0%
AATTCCCTCCACAATGATAT+CGG - chr2.3:60502998-60503017 None:intergenic 35.0%
ACCGTGAAAATCAATAAAGC+TGG - chr2.3:60505206-60505225 None:intergenic 35.0%
ACGAATCACTAGAATTCACA+AGG + chr2.3:60504381-60504400 MS.gene74598:CDS 35.0%
AGAACTTCAGAAACAACCTT+AGG - chr2.3:60504511-60504530 None:intergenic 35.0%
AGACGTCTTCTTAACTTTGT+AGG + chr2.3:60504130-60504149 MS.gene74598:CDS 35.0%
AGGTTCAAACGGAAACTTAA+GGG + chr2.3:60506377-60506396 MS.gene74598:CDS 35.0%
AGTCAACATGAAAATCTCTC+TGG - chr2.3:60505953-60505972 None:intergenic 35.0%
ATAGTATCCTCTTATGGTCA+CGG + chr2.3:60506499-60506518 MS.gene74598:intron 35.0%
ATAGTATCGCTTCTTACGAA+AGG + chr2.3:60504619-60504638 MS.gene74598:CDS 35.0%
ATCACACAAAAACAGAACAG+GGG + chr2.3:60504719-60504738 MS.gene74598:CDS 35.0%
ATTAGCGTCCTTTAATTGCA+AGG + chr2.3:60505479-60505498 MS.gene74598:intron 35.0%
ATTCACAAGTTACCGCATTA+GGG + chr2.3:60505315-60505334 MS.gene74598:intron 35.0%
CAAGAACATCAATGCATATC+CGG - chr2.3:60504762-60504781 None:intergenic 35.0%
CATCTTATGTTGGGCATATT+TGG + chr2.3:60504011-60504030 MS.gene74598:intron 35.0%
CTGTCTTCAATGTTCTTATG+TGG + chr2.3:60506701-60506720 MS.gene74598:intron 35.0%
CTTCAATGTTCTTATGTGGT+GGG + chr2.3:60506705-60506724 MS.gene74598:intron 35.0%
GAAATTTCCATTCAAAGGCA+TGG - chr2.3:60504973-60504992 None:intergenic 35.0%
GAACATAAGCAAGAAGTTGA+AGG - chr2.3:60504900-60504919 None:intergenic 35.0%
GAACTTCAGAAACAACCTTA+GGG - chr2.3:60504510-60504529 None:intergenic 35.0%
GAAGAAGTCTTAACTGAGTA+AGG + chr2.3:60505711-60505730 MS.gene74598:intron 35.0%
GAATTCCGGTGAAAATTCAT+CGG + chr2.3:60503013-60503032 MS.gene74598:CDS 35.0%
GACATTACTTTAGATGAAGC+TGG + chr2.3:60504454-60504473 MS.gene74598:CDS 35.0%
GACGTCTTCTTAACTTTGTA+GGG + chr2.3:60504131-60504150 MS.gene74598:CDS 35.0%
GCATAATTGGCATCTTATGT+TGG + chr2.3:60504001-60504020 MS.gene74598:intron 35.0%
GCTTAAAGATGATGTCAACA+AGG + chr2.3:60506870-60506889 MS.gene74598:CDS 35.0%
GTAACATACAGACTCTCTAA+GGG - chr2.3:60506959-60506978 None:intergenic 35.0%
GTTTGGCTAATGTCAATCTT+CGG + chr2.3:60504539-60504558 MS.gene74598:CDS 35.0%
TAAACTTAAACCCTCTCCAA+TGG + chr2.3:60503206-60503225 MS.gene74598:CDS 35.0%
TAGAGAGTCTGTATGTTACA+AGG + chr2.3:60506960-60506979 MS.gene74598:CDS 35.0%
TAGTATCGCTTCTTACGAAA+GGG + chr2.3:60504620-60504639 MS.gene74598:CDS 35.0%
TATCAGTATCCGATATGTGT+CGG + chr2.3:60503599-60503618 MS.gene74598:intron 35.0%
TCATAACCAACTTTGCCATA+AGG - chr2.3:60503150-60503169 None:intergenic 35.0%
TCATCTAGCAAAAGGAATTC+AGG + chr2.3:60505355-60505374 MS.gene74598:intron 35.0%
TCCACAGCAAAATTAATTGC+AGG - chr2.3:60503279-60503298 None:intergenic 35.0%
TCTCTATAACGATGTGGATT+CGG + chr2.3:60506557-60506576 MS.gene74598:intron 35.0%
TCTTCAATGTTCTTATGTGG+TGG + chr2.3:60506704-60506723 MS.gene74598:intron 35.0%
TCTTCTTAACTTTGTAGGGA+AGG + chr2.3:60504135-60504154 MS.gene74598:CDS 35.0%
TGATCCACGACAACAATATA+TGG - chr2.3:60504922-60504941 None:intergenic 35.0%
TGTAACATACAGACTCTCTA+AGG - chr2.3:60506960-60506979 None:intergenic 35.0%
TGTTCAAACTTATAACCTCG+AGG - chr2.3:60502918-60502937 None:intergenic 35.0%
TGTTCCATATATTGTTGTCG+TGG + chr2.3:60504915-60504934 MS.gene74598:intron 35.0%
TGTTTGTGAAAAATGCCACT+CGG + chr2.3:60505095-60505114 MS.gene74598:intron 35.0%
TTACTATAAAGCTCCTTCCA+TGG - chr2.3:60505553-60505572 None:intergenic 35.0%
TTCCAAAGGGAAAAATAGTC+TGG - chr2.3:60506289-60506308 None:intergenic 35.0%
TTCTTGAAAGAGAAATGCGA+AGG + chr2.3:60504776-60504795 MS.gene74598:CDS 35.0%
TTCTTGAGCTATGCATATAG+TGG + chr2.3:60503183-60503202 MS.gene74598:CDS 35.0%
! ACCTGCAATTAATTTTGCTG+TGG + chr2.3:60503275-60503294 MS.gene74598:CDS 35.0%
! AGATGTCATTTCAATCCTCA+TGG + chr2.3:60504168-60504187 MS.gene74598:CDS 35.0%
! GAACAAGCTGAGTTCTAATT+TGG + chr2.3:60502933-60502952 MS.gene74598:CDS 35.0%
! GAAGAAGTTCTTGATGCTTT+TGG + chr2.3:60505869-60505888 MS.gene74598:intron 35.0%
! GCAATTACCTGTTTTCATCA+GGG - chr2.3:60506463-60506482 None:intergenic 35.0%
! TGCAATTACCTGTTTTCATC+AGG - chr2.3:60506464-60506483 None:intergenic 35.0%
!! AACTTTTTCTGAGAGCTCAT+GGG - chr2.3:60504290-60504309 None:intergenic 35.0%
!! AAGGTTGTTTCTGAAGTTCT+TGG + chr2.3:60504511-60504530 MS.gene74598:CDS 35.0%
!! AGAGTGCTGTTAGTATTTGT+AGG + chr2.3:60504674-60504693 MS.gene74598:CDS 35.0%
!! ATACTTTTTGGACACGTATC+GGG + chr2.3:60503562-60503581 MS.gene74598:intron 35.0%
!! ATTTTTCAGCCATATGAAGG+TGG - chr2.3:60506048-60506067 None:intergenic 35.0%
!! CAAGAGACTTATTTCTAGGA+TGG + chr2.3:60506434-60506453 MS.gene74598:CDS 35.0%
!! CGAGTTGATTCAATTGACAA+TGG - chr2.3:60504201-60504220 None:intergenic 35.0%
!! GATACTTTTTGGACACGTAT+CGG + chr2.3:60503561-60503580 MS.gene74598:intron 35.0%
!! GTTTCTGAAGTTCTTGGATT+GGG + chr2.3:60504517-60504536 MS.gene74598:CDS 35.0%
!! TAACTTTTTCTGAGAGCTCA+TGG - chr2.3:60504291-60504310 None:intergenic 35.0%
!! TGTTTCTGAAGTTCTTGGAT+TGG + chr2.3:60504516-60504535 MS.gene74598:CDS 35.0%
!!! AGTAACAGGTTGCTGTTTTT+AGG + chr2.3:60505568-60505587 MS.gene74598:intron 35.0%
!!! GCCAGCTTTATTGATTTTCA+CGG + chr2.3:60505202-60505221 MS.gene74598:intron 35.0%
!!! GTAACAGGTTGCTGTTTTTA+GGG + chr2.3:60505569-60505588 MS.gene74598:intron 35.0%
AAACAAGGCAAAATCGATGC+TGG - chr2.3:60505914-60505933 None:intergenic 40.0%
AAACTCCAAAATGGGAAGCA+AGG - chr2.3:60505072-60505091 None:intergenic 40.0%
AAGAAGAGCAAAGAGTCAAG+AGG + chr2.3:60506833-60506852 MS.gene74598:CDS 40.0%
AGAAATGCGAAGGAATCCTT+TGG + chr2.3:60504786-60504805 MS.gene74598:CDS 40.0%
AGCACTCAGTGAAAAGGATT+AGG + chr2.3:60505784-60505803 MS.gene74598:intron 40.0%
AGGAGCAACTGATCTTATAG+AGG + chr2.3:60505847-60505866 MS.gene74598:intron 40.0%
AGGGCATATGTTGTGACTAA+TGG - chr2.3:60502872-60502891 None:intergenic 40.0%
AGTATCGCTTCTTACGAAAG+GGG + chr2.3:60504621-60504640 MS.gene74598:CDS 40.0%
AGTCACAACATATGCCCTAA+TGG + chr2.3:60502874-60502893 MS.gene74598:CDS 40.0%
ATGACAGTTGCGTCTTTAGT+TGG + chr2.3:60503463-60503482 MS.gene74598:intron 40.0%
ATGATTCAGAACATGGGAAG+AGG + chr2.3:60503799-60503818 MS.gene74598:intron 40.0%
CAAATCCTAATCACTCGCAA+GGG - chr2.3:60505420-60505439 None:intergenic 40.0%
CAAGGTACAAAAGCTTCATG+TGG - chr2.3:60504855-60504874 None:intergenic 40.0%
CACTAGAATTCACAAGGCAT+TGG + chr2.3:60504387-60504406 MS.gene74598:CDS 40.0%
CCTTAATCAGTGAAGACAGA+TGG - chr2.3:60505754-60505773 None:intergenic 40.0%
CGGTTAACTCTGGGTTTATA+CGG + chr2.3:60506577-60506596 MS.gene74598:intron 40.0%
CTTGACTCTTTGCTCTTCTT+GGG - chr2.3:60506833-60506852 None:intergenic 40.0%
GATTCACAAGTTACCGCATT+AGG + chr2.3:60505314-60505333 MS.gene74598:intron 40.0%
GCTCTTTCTCAATTGAGATC+TGG - chr2.3:60504264-60504283 None:intergenic 40.0%
GGAAATGTAAGGCTGGAATT+TGG + chr2.3:60505282-60505301 MS.gene74598:intron 40.0%
GTGACTTCTCTATAACGATG+TGG + chr2.3:60506551-60506570 MS.gene74598:intron 40.0%
TAAGGTGAATCCAATGACCA+AGG - chr2.3:60505603-60505622 None:intergenic 40.0%
TAATTCCCTTGCGAGTGATT+AGG + chr2.3:60505412-60505431 MS.gene74598:intron 40.0%
TACGGAACACGTATTGTATC+CGG + chr2.3:60503432-60503451 MS.gene74598:intron 40.0%
TAGAACTCTACACCCTAATG+CGG - chr2.3:60505330-60505349 None:intergenic 40.0%
TATCATTGTGGAGGGAATTC+CGG + chr2.3:60502999-60503018 MS.gene74598:CDS 40.0%
TCAATCTTCGGAATTCTCGA+GGG + chr2.3:60504551-60504570 MS.gene74598:CDS 40.0%
TCATCTTCGCACTTGTCAAA+TGG + chr2.3:60502844-60502863 MS.gene74598:CDS 40.0%
TCGGCATCAAAAGGTTCAAA+CGG + chr2.3:60506366-60506385 MS.gene74598:CDS 40.0%
TCTCAATTGAGATCTGGTCA+AGG - chr2.3:60504258-60504277 None:intergenic 40.0%
TCTTGACTCTTTGCTCTTCT+TGG - chr2.3:60506834-60506853 None:intergenic 40.0%
TCTTTAACTCCTTGTGCAAC+TGG + chr2.3:60505153-60505172 MS.gene74598:intron 40.0%
TGCAATGTCCATGGCTAATT+TGG - chr2.3:60506313-60506332 None:intergenic 40.0%
TGGAAAAGTGATACCAACTC+TGG - chr2.3:60503333-60503352 None:intergenic 40.0%
TTCAAACGGAAACTTAAGGG+AGG + chr2.3:60506380-60506399 MS.gene74598:CDS 40.0%
TTCGTTTCCATGCCTTTGAA+TGG + chr2.3:60504963-60504982 MS.gene74598:intron 40.0%
TTGGTCATTGGATTCACCTT+AGG + chr2.3:60505602-60505621 MS.gene74598:intron 40.0%
TTGTTGCCTTATGGCAAAGT+TGG + chr2.3:60503141-60503160 MS.gene74598:CDS 40.0%
TTTGGAAGCCAAATTAGCCA+TGG + chr2.3:60506302-60506321 MS.gene74598:CDS 40.0%
! ATGGCTAATTTGGCTTCCAA+AGG - chr2.3:60506303-60506322 None:intergenic 40.0%
! ATGTGGATTCGGTTAACTCT+GGG + chr2.3:60506568-60506587 MS.gene74598:intron 40.0%
! CCATCTGTCTTCACTGATTA+AGG + chr2.3:60505751-60505770 MS.gene74598:intron 40.0%
! CGTTTTCATCATCCTGATGA+AGG - chr2.3:60504330-60504349 None:intergenic 40.0%
! CTTTTGTACCTTGAGAACAG+AGG + chr2.3:60504862-60504881 MS.gene74598:CDS 40.0%
! GGAAGGAGCTTTATAGTAAC+AGG + chr2.3:60505554-60505573 MS.gene74598:intron 40.0%
! GTGCTGTTAGTATTTGTAGG+AGG + chr2.3:60504677-60504696 MS.gene74598:CDS 40.0%
! TGAAGTTCTTGGATTGGGTT+TGG + chr2.3:60504522-60504541 MS.gene74598:CDS 40.0%
! TGGCTAATTTGGCTTCCAAA+GGG - chr2.3:60506302-60506321 None:intergenic 40.0%
!! ACTTTTTCTGAGAGCTCATG+GGG - chr2.3:60504289-60504308 None:intergenic 40.0%
!! ATGCACCGATGAATTTTCAC+CGG - chr2.3:60503021-60503040 None:intergenic 40.0%
!! GAGACTTATTTCTAGGATGG+AGG + chr2.3:60506437-60506456 MS.gene74598:CDS 40.0%
!! TAGTTCTGGAAATGTAAGGC+TGG + chr2.3:60505275-60505294 MS.gene74598:intron 40.0%
!! TGCCAGACTATTTTTCCCTT+TGG + chr2.3:60506284-60506303 MS.gene74598:CDS 40.0%
!! TTGAGCGATTTGTTGCCTTA+TGG + chr2.3:60503132-60503151 MS.gene74598:CDS 40.0%
!! TTTGCTGTTGCATTACGAAG+AGG + chr2.3:60505436-60505455 MS.gene74598:intron 40.0%
!! TTTTAAGTGGTTCTTCCGAG+TGG - chr2.3:60505113-60505132 None:intergenic 40.0%
!!! AGAGTTGGTATCACTTTTCC+AGG + chr2.3:60503332-60503351 MS.gene74598:CDS 40.0%
!!! TTTTTAGGGTTCTTGCTCCT+TGG + chr2.3:60505583-60505602 MS.gene74598:intron 40.0%
AAACAACCTTAGGGTCACAG+TGG - chr2.3:60504501-60504520 None:intergenic 45.0%
AAAGCTGAGTTTAGTCGCTC+TGG + chr2.3:60506907-60506926 MS.gene74598:CDS 45.0%
AACAACCTTAGGGTCACAGT+GGG - chr2.3:60504500-60504519 None:intergenic 45.0%
AAGCTGAGTTTAGTCGCTCT+GGG + chr2.3:60506908-60506927 MS.gene74598:CDS 45.0%
AATTGAAGGCTCCTTACGCA+TGG - chr2.3:60504599-60504618 None:intergenic 45.0%
ACACATGTAGACACCTCCAT+TGG - chr2.3:60503225-60503244 None:intergenic 45.0%
ACGGAACACGTATTGTATCC+GGG + chr2.3:60503433-60503452 MS.gene74598:intron 45.0%
ACTTAAACCCTCTCCAATGG+AGG + chr2.3:60503209-60503228 MS.gene74598:CDS 45.0%
AGCTGGAGCAAGAACAAGTA+TGG - chr2.3:60505819-60505838 None:intergenic 45.0%
AGGAATTCAGGCGCAAACAA+AGG + chr2.3:60505367-60505386 MS.gene74598:intron 45.0%
ATCGGTGCATTCTAGGTTCT+AGG + chr2.3:60503031-60503050 MS.gene74598:CDS 45.0%
CTAAAGACGCAACTGTCATC+CGG - chr2.3:60503462-60503481 None:intergenic 45.0%
CTTAGAGCATGAAAGGGAGA+AGG + chr2.3:60505689-60505708 MS.gene74598:intron 45.0%
GACAATGGAAAGCAACCATG+AGG - chr2.3:60504186-60504205 None:intergenic 45.0%
GATGCCGATATCATTGTGGA+GGG + chr2.3:60502991-60503010 MS.gene74598:CDS 45.0%
GCAAATCCTAATCACTCGCA+AGG - chr2.3:60505421-60505440 None:intergenic 45.0%
GGAATTCAGGCGCAAACAAA+GGG + chr2.3:60505368-60505387 MS.gene74598:intron 45.0%
GTAAGGCTGGAATTTGGAAG+TGG + chr2.3:60505288-60505307 MS.gene74598:intron 45.0%
GTACCTTGAGAACAGAGGTA+TGG + chr2.3:60504867-60504886 MS.gene74598:intron 45.0%
GTATTTGTAGGAGGTTGACG+AGG + chr2.3:60504686-60504705 MS.gene74598:CDS 45.0%
GTCAATCTTCGGAATTCTCG+AGG + chr2.3:60504550-60504569 MS.gene74598:CDS 45.0%
GTTTGTGCTCATGATGCTTG+CGG + chr2.3:60503252-60503271 MS.gene74598:CDS 45.0%
TAAAGACGCAACTGTCATCC+GGG - chr2.3:60503461-60503480 None:intergenic 45.0%
TCACCATACCTCTGTTCTCA+AGG - chr2.3:60504873-60504892 None:intergenic 45.0%
TCTTCGTCATGTACCATGGA+AGG + chr2.3:60505537-60505556 MS.gene74598:intron 45.0%
TGAAAACGATGCTCCTGTAG+TGG + chr2.3:60504342-60504361 MS.gene74598:CDS 45.0%
TGAGTGAGCACTCAGTGAAA+AGG + chr2.3:60505778-60505797 MS.gene74598:intron 45.0%
TGATGCCGATATCATTGTGG+AGG + chr2.3:60502990-60503009 MS.gene74598:CDS 45.0%
TGCCACTCTGTCAACACATT+GGG - chr2.3:60504227-60504246 None:intergenic 45.0%
TTCCATGGTACATGACGAAG+AGG - chr2.3:60505538-60505557 None:intergenic 45.0%
! AAGGGCCAATTTTCTGCTGA+AGG + chr2.3:60505386-60505405 MS.gene74598:intron 45.0%
! AGACTCTCTAAGGGATGAAG+AGG - chr2.3:60506950-60506969 None:intergenic 45.0%
! AGTATCCGATATGTGTCGGT+CGG + chr2.3:60503603-60503622 MS.gene74598:intron 45.0%
! GAGGTCACACGTTTGAGTTA+TGG + chr2.3:60505455-60505474 MS.gene74598:intron 45.0%
! GATGTGGATTCGGTTAACTC+TGG + chr2.3:60506567-60506586 MS.gene74598:intron 45.0%
! GCATCGGATTTGACTTTCGA+TGG + chr2.3:60504649-60504668 MS.gene74598:CDS 45.0%
! GCGCTACTTTCCTAATTGCT+CGG + chr2.3:60506747-60506766 MS.gene74598:CDS 45.0%
! GTGATCCTTGCTTCCCATTT+TGG + chr2.3:60505064-60505083 MS.gene74598:intron 45.0%
! TGGTGATGCCGATATCATTG+TGG + chr2.3:60502987-60503006 MS.gene74598:CDS 45.0%
!! ATCCGAGTTTGCTGGTCTTT+CGG + chr2.3:60506347-60506366 MS.gene74598:CDS 45.0%
!!! TATTTTTTTTTAATTAAAAC+TGG - chr2.3:60505993-60506012 None:intergenic 5.0%
ACAGAGGGATCTGTAGCCAA+AGG - chr2.3:60504805-60504824 None:intergenic 50.0%
ACGTATTGTATCCGGGATCC+CGG + chr2.3:60503440-60503459 MS.gene74598:intron 50.0%
ACTGTGTGGGAAGACACAGA+GGG - chr2.3:60504820-60504839 None:intergenic 50.0%
AGTGCTCGACAAGTTCATGG+AGG + chr2.3:60506771-60506790 MS.gene74598:CDS 50.0%
ATCCAATGGTCAGCTTTCCG+AGG - chr2.3:60505180-60505199 None:intergenic 50.0%
ATGGAGGCCCTGATGAAAAC+AGG + chr2.3:60506453-60506472 MS.gene74598:CDS 50.0%
ATGGTCACGGCGATTTCCAA+TGG + chr2.3:60506512-60506531 MS.gene74598:intron 50.0%
CATCATCCTGATGAAGGTCG+CGG - chr2.3:60504324-60504343 None:intergenic 50.0%
CGATTTCCAATGGAATCGCG+GGG + chr2.3:60506522-60506541 MS.gene74598:intron 50.0%
CTCGAGGTTACGAGCATGAT+CGG - chr2.3:60502902-60502921 None:intergenic 50.0%
CTTGCTCCAGCTCTCAGATT+AGG + chr2.3:60505827-60505846 MS.gene74598:intron 50.0%
CTTTGTAGGGAAGGCTCTTG+TGG + chr2.3:60504144-60504163 MS.gene74598:CDS 50.0%
GAAATCGCCGTGACCATAAG+AGG - chr2.3:60506509-60506528 None:intergenic 50.0%
GACCTCTTCGTCATGTACCA+TGG + chr2.3:60505533-60505552 MS.gene74598:intron 50.0%
GAGACAACATCCGAGTTTGC+TGG + chr2.3:60506339-60506358 MS.gene74598:CDS 50.0%
GAGATCATCAGCCACTGTGT+GGG - chr2.3:60504833-60504852 None:intergenic 50.0%
GAGCATGATCGGAGCCATTA+GGG - chr2.3:60502891-60502910 None:intergenic 50.0%
GCGATTTCCAATGGAATCGC+GGG + chr2.3:60506521-60506540 MS.gene74598:intron 50.0%
GGCGATTTCCAATGGAATCG+CGG + chr2.3:60506520-60506539 MS.gene74598:intron 50.0%
GGCTGGAATTTGGAAGTGGT+TGG + chr2.3:60505292-60505311 MS.gene74598:intron 50.0%
GGTTCTTGCTCCTTGGTCAT+TGG + chr2.3:60505590-60505609 MS.gene74598:intron 50.0%
GTACATGACGAAGAGGTCAC+AGG - chr2.3:60505531-60505550 None:intergenic 50.0%
GTAGACACCTCCATTGGAGA+GGG - chr2.3:60503219-60503238 None:intergenic 50.0%
GTGCTGAGACCACCTTCATA+TGG + chr2.3:60506036-60506055 MS.gene74598:intron 50.0%
GTTGCTCCTAATCTGAGAGC+TGG - chr2.3:60505836-60505855 None:intergenic 50.0%
TACGAAAGGGGCTTGTGCAT+CGG + chr2.3:60504633-60504652 MS.gene74598:CDS 50.0%
TCACATTGCTGCCATGCGTA+AGG + chr2.3:60504585-60504604 MS.gene74598:CDS 50.0%
TCGAGCACTTCCGAGCAATT+AGG - chr2.3:60506760-60506779 None:intergenic 50.0%
TGCCGAAAGACCAGCAAACT+CGG - chr2.3:60506352-60506371 None:intergenic 50.0%
TGTAGACACCTCCATTGGAG+AGG - chr2.3:60503220-60503239 None:intergenic 50.0%
TGTTGACAGAGTGGCACGAT+CGG + chr2.3:60504231-60504250 MS.gene74598:CDS 50.0%
TTGTCGTGGATCAAGCTTCG+AGG + chr2.3:60504929-60504948 MS.gene74598:intron 50.0%
! AGGGACAAAGTGTCCACTAC+AGG - chr2.3:60504358-60504377 None:intergenic 50.0%
! GTGCCACTCTGTCAACACAT+TGG - chr2.3:60504228-60504247 None:intergenic 50.0%
! TGCCCAATGTGTTGACAGAG+TGG + chr2.3:60504222-60504241 MS.gene74598:CDS 50.0%
!! CAGGCCTGTCTTGTTTATGC+TGG + chr2.3:60506125-60506144 MS.gene74598:intron 50.0%
!! GCTGGTCTTTCGGCATCAAA+AGG + chr2.3:60506357-60506376 MS.gene74598:CDS 50.0%
!! GGAAGTGCTCGACAAGTTCA+TGG + chr2.3:60506768-60506787 MS.gene74598:CDS 50.0%
AGCATTGCTGTCTGCTGCAG+TGG + chr2.3:60506257-60506276 MS.gene74598:intron 55.0%
AGTAGCCCACTGTGACCCTA+AGG + chr2.3:60504492-60504511 MS.gene74598:CDS 55.0%
CACTGTGTGGGAAGACACAG+AGG - chr2.3:60504821-60504840 None:intergenic 55.0%
CGAGCATGATCGGAGCCATT+AGG - chr2.3:60502892-60502911 None:intergenic 55.0%
CGATCATGCTCGTAACCTCG+AGG + chr2.3:60502900-60502919 MS.gene74598:CDS 55.0%
CTCCTTGTGCAACTGGACCT+CGG + chr2.3:60505160-60505179 MS.gene74598:intron 55.0%
CTCTGCACGTGCAATGTCCA+TGG - chr2.3:60506322-60506341 None:intergenic 55.0%
CTCTGTGTCTTCCCACACAG+TGG + chr2.3:60504819-60504838 MS.gene74598:CDS 55.0%
CTTCTTGGGTGCCCTTCTCA+AGG - chr2.3:60506819-60506838 None:intergenic 55.0%
GACCTCGGAAAGCTGACCAT+TGG + chr2.3:60505175-60505194 MS.gene74598:intron 55.0%
GGAGATCATCAGCCACTGTG+TGG - chr2.3:60504834-60504853 None:intergenic 55.0%
TAGGAGGTTGACGAGGCCAA+AGG + chr2.3:60504693-60504712 MS.gene74598:CDS 55.0%
TTCCGAGGTCCAGTTGCACA+AGG - chr2.3:60505165-60505184 None:intergenic 55.0%
! TGGTGGGTGTCAGTCGAGAT+GGG + chr2.3:60506721-60506740 MS.gene74598:intron 55.0%
!! CACAGTGGGCTACTGCATAG+TGG - chr2.3:60504486-60504505 None:intergenic 55.0%
!! GAGCACCGACCGACACATAT+CGG - chr2.3:60503611-60503630 None:intergenic 55.0%
CATCCTGATGAAGGTCGCGG+CGG - chr2.3:60504321-60504340 None:intergenic 60.0%
GCAACTGTCATCCGGGATCC+CGG - chr2.3:60503454-60503473 None:intergenic 60.0%
GGTGGGTGTCAGTCGAGATG+GGG + chr2.3:60506722-60506741 MS.gene74598:intron 60.0%
!! GTGGTGGGTGTCAGTCGAGA+TGG + chr2.3:60506720-60506739 MS.gene74598:intron 60.0%
CAATGGAATCGCGGGGCAGC+AGG + chr2.3:60506529-60506548 MS.gene74598:intron 65.0%
CTGCTGCCCCGCGATTCCAT+TGG - chr2.3:60506531-60506550 None:intergenic 65.0%
GGGTGTCAGTCGAGATGGGG+CGG + chr2.3:60506725-60506744 MS.gene74598:intron 65.0%
GCTCCGCCGCGACCTTCATC+AGG + chr2.3:60504315-60504334 MS.gene74598:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 60502805 60506996 60502805 ID=MS.gene74598
chr2.3 mRNA 60502805 60506996 60502805 ID=MS.gene74598.t1;Parent=MS.gene74598
chr2.3 exon 60502805 60503353 60502805 ID=MS.gene74598.t1.exon1;Parent=MS.gene74598.t1
chr2.3 CDS 60502805 60503353 60502805 ID=cds.MS.gene74598.t1;Parent=MS.gene74598.t1
chr2.3 exon 60504130 60504883 60504130 ID=MS.gene74598.t1.exon2;Parent=MS.gene74598.t1
chr2.3 CDS 60504130 60504883 60504130 ID=cds.MS.gene74598.t1;Parent=MS.gene74598.t1
chr2.3 exon 60506277 60506474 60506277 ID=MS.gene74598.t1.exon3;Parent=MS.gene74598.t1
chr2.3 CDS 60506277 60506474 60506277 ID=cds.MS.gene74598.t1;Parent=MS.gene74598.t1
chr2.3 exon 60506734 60506996 60506734 ID=MS.gene74598.t1.exon4;Parent=MS.gene74598.t1
chr2.3 CDS 60506734 60506996 60506734 ID=cds.MS.gene74598.t1;Parent=MS.gene74598.t1
Gene Sequence

>MS.gene74598

ATGGCTAATTCGGCTGAACCCTCTTTGAGCAATAATACATCATCTTCGCACTTGTCAAATGGATCCATTAGTCACAACATATGCCCTAATGGCTCCGATCATGCTCGTAACCTCGAGGTTATAAGTTTGAACAAGCTGAGTTCTAATTTGGAGCAGCTTTTGATTGATTCTGATTATGATTATGGTGATGCCGATATCATTGTGGAGGGAATTCCGGTGAAAATTCATCGGTGCATTCTAGGTTCTAGGAGTAAGTTTTTCCATGAAATATTTAAGAGGGGTAAAGATAAAGGATTGTCGAAGAATGAAGGGAAATTGAAGTATTGTTTGAGCGATTTGTTGCCTTATGGCAAAGTTGGTTATGAAGCTTTTCTTATATTCTTGAGCTATGCATATAGTGGTAAACTTAAACCCTCTCCAATGGAGGTGTCTACATGTGTTGATAATGTTTGTGCTCATGATGCTTGCGGACCTGCAATTAATTTTGCTGTGGAGTTAATGTATGCCTCTTCCATTTTTCAAATACCAGAGTTGGTATCACTTTTCCAGGTAAACATTATATCTATGATGATAGTTATGAATCTGTCACAAGAAACATACAATTCAATGTCTATTGTTAGTTAGACGTACGGAACACGTATTGTATCCGGGATCCCGGATGACAGTTGCGTCTTTAGTTGGTAAAAAGCATTGAAGATGTATTTGAGAAGTATTGGTGAAAATACATATTTTTTAAAATAATATATATTATTATCAGATACTTTTTGGACACGTATCGGGAAGTATGAGATGCTTATCAGTATCCGATATGTGTCGGTCGGTGCTCTTTTATTTTTGAAGTATTTGGGCTTCATAGCTGCTACTTGACCCCCACTTGAACATTTTTCTATATGTCCTTTCTGTTTTCTCTATATTATGAAATTTAGTTCAAGTTTAGGAATAATTAATTATCTGTTAGGCTATTGTCATGTTCTATGCCAAGATGTTTTGTATGATGATTCAGAACATGGGAAGAGGTTTCATATATCTAGCAAGTAGTAGTGCGTGCTTCAATATAAATGATTTCCTTTTCCAAAACAAATTTCTTACTATACATGTATTATTGTTGATTGAATACAACTTTTACTTTTGTTGATTTTGAAGGGATTTGAAATTAAACTCTATGATCAATACGCCATATATCTTGCTTTCTTTAGGCATAATTGGCATCTTATGTTGGGCATATTTGGAAAATTGCAAACTAATTTCACATCTGAATTACTAGTCATATTGTATCTGATCAAGGTTAAGGATTGAGAAACTAAGTATTACTTCAAATTTTGCAGAGACGTCTTCTTAACTTTGTAGGGAAGGCTCTTGTGGAAGATGTCATTTCAATCCTCATGGTTGCTTTCCATTGTCAATTGAATCAACTCGTTGCCCAATGTGTTGACAGAGTGGCACGATCGGACCTTGACCAGATCTCAATTGAGAAAGAGCTTCCCCATGAGCTCTCAGAAAAAGTTAAATTGCTCCGCCGCGACCTTCATCAGGATGATGAAAACGATGCTCCTGTAGTGGACACTTTGTCCCTAAAACGAATCACTAGAATTCACAAGGCATTGGACTCAGACGACGTCGAGCTTGTTAAACTTCTTTTAAACGAGTCAGACATTACTTTAGATGAAGCTGGTGCTCTCCACTATGCAGTAGCCCACTGTGACCCTAAGGTTGTTTCTGAAGTTCTTGGATTGGGTTTGGCTAATGTCAATCTTCGGAATTCTCGAGGGTATACAGTGCTTCACATTGCTGCCATGCGTAAGGAGCCTTCAATTATAGTATCGCTTCTTACGAAAGGGGCTTGTGCATCGGATTTGACTTTCGATGGTCAGAGTGCTGTTAGTATTTGTAGGAGGTTGACGAGGCCAAAGGATTATCACACAAAAACAGAACAGGGGAAAGAAACAAATAAAGACCGGATATGCATTGATGTTCTTGAAAGAGAAATGCGAAGGAATCCTTTGGCTACAGATCCCTCTGTGTCTTCCCACACAGTGGCTGATGATCTCCACATGAAGCTTTTGTACCTTGAGAACAGAGGTATGGTGATATTCCTTCAACTTCTTGCTTATGTTCCATATATTGTTGTCGTGGATCAAGCTTCGAGGATTTCAAATGCTTCGTTTCCATGCCTTTGAATGGAAATTTCCCAAAACTGAGTCATTTTGTTTTCATACTTCTTTTTGTGTATATTTCTATTTTACTTTGTATTTGATCAGTGTGATCCTTGCTTCCCATTTTGGAGTTTTTTTGTTTGTGAAAAATGCCACTCGGAAGAACCACTTAAAATTTATGGGTTTCGATTGTGTTCTTTAACTCCTTGTGCAACTGGACCTCGGAAAGCTGACCATTGGATTTGCCAGCTTTATTGATTTTCACGGTAACAGTTTTGACACCAACTTTATGTAATTTTGAACTCAGAGAATTTAGATAGTTCTGGAAATGTAAGGCTGGAATTTGGAAGTGGTTGGATTCACAAGTTACCGCATTAGGGTGTAGAGTTCTAAAGTTTCATCTAGCAAAAGGAATTCAGGCGCAAACAAAGGGCCAATTTTCTGCTGAAGGTTTTAATTCCCTTGCGAGTGATTAGGATTTGCTGTTGCATTACGAAGAGGTCACACGTTTGAGTTATGGTATTAGCGTCCTTTAATTGCAAGGTAAGATTGTTTACACAATAGATCAAACCTGTGACCTCTTCGTCATGTACCATGGAAGGAGCTTTATAGTAACAGGTTGCTGTTTTTAGGGTTCTTGCTCCTTGGTCATTGGATTCACCTTAGGAAAATATTGTTTAAAATAAAAAGTTGAGATGTAGAAAAGTGCAAGCATTTTACTCTGAATATAGCTTAGAGCATGAAAGGGAGAAGGAAGAAGTCTTAACTGAGTAAGGAAGAAGTCAAACTCATACCATCTGTCTTCACTGATTAAGGAGTTTGAGTGAGCACTCAGTGAAAAGGATTAGGAAAGCTCGTCCATACTTGTTCTTGCTCCAGCTCTCAGATTAGGAGCAACTGATCTTATAGAGGAAGAAGTTCTTGATGCTTTTGGACGTCTTTCACAAACGCTACCAGCATCGATTTTGCCTTGTTTCATTTGTAGCTAAATGCCAGAGAGATTTTCATGTTGACTTGAATAATTTCTTAATTCCAGTTTTAATTAAAAAAAAATAAGAAATGATATTTTTTAAAAGAAGTGCTGAGACCACCTTCATATGGCTGAAAAATTCAGGAGCTAGTTTCTATAAAACCTTTTTTTTTTTTTTTTTTTTAAATTTTCTGTTTCAGGCCTGTCTTGTTTATGCTGGTATTTCATTCTCTTAATAAATATGATGTTTGACTTCTTTTTGAATGTTATGTTCAACTGATTTACTATGTTTGTGTTGGTTTTTTATTCTCAAAAACCATCAAATAATAAGCATTGCTGTCTGCTGCAGTGGCATTTGCCAGACTATTTTTCCCTTTGGAAGCCAAATTAGCCATGGACATTGCACGTGCAGAGACAACATCCGAGTTTGCTGGTCTTTCGGCATCAAAAGGTTCAAACGGAAACTTAAGGGAGGTTGATCTCAATGAAACTCCCATAATGCAAAACAAGAGACTTATTTCTAGGATGGAGGCCCTGATGAAAACAGGTAATTGCAATCTTTTGCTATTTAATAGTATCCTCTTATGGTCACGGCGATTTCCAATGGAATCGCGGGGCAGCAGGTGACTTCTCTATAACGATGTGGATTCGGTTAACTCTGGGTTTATACGGTTAGAGAAGCCATCTGATTCTCTGATTGATTTCAACTGTCTTTAGTTTTGATTAGATTTCGCTTTATTTATCCATGTTTCTATGTACAATTCTAAGTCTTACTGTCTTCAATGTTCTTATGTGGTGGGTGTCAGTCGAGATGGGGCGGCGCTACTTTCCTAATTGCTCGGAAGTGCTCGACAAGTTCATGGAGGATGACCTACCTGATTTGTTTTACCTTGAGAAGGGCACCCAAGAAGAGCAAAGAGTCAAGAGGACGAGATTCGTTGAGCTTAAAGATGATGTCAACAAGGCTTTCAGCAAAGACAAAGCTGAGTTTAGTCGCTCTGGGATTTCATCTTCATCATCCTCTTCATCCCTTAGAGAGTCTGTATGTTACAAGGCTAGAAAAATGTGA
Protein sequence

>MS.gene74598.t1

MANSAEPSLSNNTSSSHLSNGSISHNICPNGSDHARNLEVISLNKLSSNLEQLLIDSDYDYGDADIIVEGIPVKIHRCILGSRSKFFHEIFKRGKDKGLSKNEGKLKYCLSDLLPYGKVGYEAFLIFLSYAYSGKLKPSPMEVSTCVDNVCAHDACGPAINFAVELMYASSIFQIPELVSLFQRRLLNFVGKALVEDVISILMVAFHCQLNQLVAQCVDRVARSDLDQISIEKELPHELSEKVKLLRRDLHQDDENDAPVVDTLSLKRITRIHKALDSDDVELVKLLLNESDITLDEAGALHYAVAHCDPKVVSEVLGLGLANVNLRNSRGYTVLHIAAMRKEPSIIVSLLTKGACASDLTFDGQSAVSICRRLTRPKDYHTKTEQGKETNKDRICIDVLEREMRRNPLATDPSVSSHTVADDLHMKLLYLENRVAFARLFFPLEAKLAMDIARAETTSEFAGLSASKGSNGNLREVDLNETPIMQNKRLISRMEALMKTVEMGRRYFPNCSEVLDKFMEDDLPDLFYLEKGTQEEQRVKRTRFVELKDDVNKAFSKDKAEFSRSGISSSSSSSSLRESVCYKARKM