Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74846.t1 | XP_024630916.1 | 94.3 | 737 | 42 | 0 | 1 | 737 | 1 | 737 | 0.00E+00 | 1401.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74846.t1 | Q9SZL8 | 33.9 | 666 | 426 | 8 | 1 | 655 | 38 | 700 | 1.1e-107 | 392.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74846.t1 | A0A3Q7Y261 | 79.1 | 722 | 148 | 1 | 3 | 724 | 5 | 723 | 0.0e+00 | 1184.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene74846.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74846.t1 | MTR_0402s0040 | 58.743 | 366 | 78 | 6 | 394 | 759 | 200 | 492 | 1.81e-123 | 379 |
MS.gene74846.t1 | MTR_0402s0040 | 72.637 | 201 | 54 | 1 | 9 | 209 | 1 | 200 | 2.13e-94 | 303 |
MS.gene74846.t1 | MTR_7g113010 | 80.503 | 159 | 17 | 1 | 1 | 159 | 424 | 568 | 2.82e-79 | 266 |
MS.gene74846.t1 | MTR_1g057920 | 92.683 | 123 | 9 | 0 | 1 | 123 | 1 | 123 | 9.41e-77 | 243 |
MS.gene74846.t1 | MTR_6g017200 | 72.358 | 123 | 34 | 0 | 8 | 130 | 32 | 154 | 4.24e-55 | 186 |
MS.gene74846.t1 | MTR_5g015480 | 57.669 | 163 | 65 | 1 | 1 | 163 | 27 | 185 | 2.37e-50 | 177 |
MS.gene74846.t1 | MTR_2g070590 | 69.231 | 117 | 36 | 0 | 20 | 136 | 3 | 119 | 4.40e-49 | 169 |
MS.gene74846.t1 | MTR_0558s0020 | 32.389 | 247 | 148 | 4 | 48 | 275 | 50 | 296 | 1.74e-39 | 148 |
MS.gene74846.t1 | MTR_1g086270 | 59.130 | 115 | 35 | 1 | 329 | 443 | 1 | 103 | 2.54e-39 | 141 |
MS.gene74846.t1 | MTR_6g051425 | 29.431 | 299 | 189 | 6 | 36 | 315 | 19 | 314 | 1.76e-37 | 144 |
MS.gene74846.t1 | MTR_8g446020 | 34.615 | 208 | 123 | 3 | 80 | 275 | 50 | 256 | 9.67e-37 | 139 |
MS.gene74846.t1 | MTR_6g090505 | 34.597 | 211 | 123 | 3 | 79 | 274 | 20 | 230 | 4.36e-35 | 137 |
MS.gene74846.t1 | MTR_1g050985 | 91.667 | 60 | 5 | 0 | 104 | 163 | 39 | 98 | 2.59e-31 | 118 |
MS.gene74846.t1 | MTR_0137s0040 | 55.769 | 104 | 44 | 1 | 1 | 102 | 1 | 104 | 8.18e-29 | 111 |
MS.gene74846.t1 | MTR_1g070355 | 29.719 | 249 | 161 | 6 | 29 | 269 | 67 | 309 | 3.53e-27 | 117 |
MS.gene74846.t1 | MTR_1g083640 | 28.070 | 228 | 145 | 4 | 38 | 246 | 55 | 282 | 8.66e-26 | 108 |
MS.gene74846.t1 | MTR_0291s0060 | 67.568 | 74 | 24 | 0 | 11 | 84 | 12 | 85 | 1.47e-24 | 98.6 |
MS.gene74846.t1 | MTR_4g035820 | 29.457 | 258 | 170 | 7 | 30 | 279 | 71 | 324 | 1.77e-22 | 103 |
MS.gene74846.t1 | MTR_7g446520 | 29.918 | 244 | 153 | 4 | 38 | 280 | 92 | 318 | 8.28e-22 | 97.8 |
MS.gene74846.t1 | MTR_0337s0040 | 29.944 | 177 | 111 | 3 | 80 | 244 | 51 | 226 | 9.62e-22 | 95.1 |
MS.gene74846.t1 | MTR_7g446480 | 37.576 | 165 | 100 | 2 | 121 | 283 | 151 | 314 | 2.05e-21 | 96.3 |
MS.gene74846.t1 | MTR_7g446510 | 36.970 | 165 | 101 | 2 | 121 | 283 | 166 | 329 | 6.45e-21 | 95.1 |
MS.gene74846.t1 | MTR_7g074790 | 35.465 | 172 | 89 | 4 | 34 | 204 | 10 | 160 | 1.18e-20 | 92.0 |
MS.gene74846.t1 | MTR_5g076070 | 26.695 | 236 | 155 | 7 | 37 | 263 | 56 | 282 | 2.09e-19 | 89.7 |
MS.gene74846.t1 | MTR_5g039760 | 31.980 | 197 | 106 | 5 | 36 | 230 | 12 | 182 | 9.23e-19 | 85.5 |
MS.gene74846.t1 | MTR_1g008290 | 34.043 | 141 | 87 | 3 | 89 | 228 | 6 | 141 | 4.30e-17 | 79.3 |
MS.gene74846.t1 | MTR_4g067290 | 39.048 | 105 | 62 | 2 | 34 | 138 | 56 | 158 | 5.87e-16 | 78.6 |
MS.gene74846.t1 | MTR_4g067290 | 39.048 | 105 | 62 | 2 | 34 | 138 | 56 | 158 | 6.04e-16 | 78.6 |
MS.gene74846.t1 | MTR_4g067290 | 39.048 | 105 | 62 | 2 | 34 | 138 | 76 | 178 | 1.02e-15 | 78.2 |
MS.gene74846.t1 | MTR_4g102720 | 29.586 | 169 | 81 | 4 | 34 | 201 | 7 | 138 | 1.04e-15 | 77.4 |
MS.gene74846.t1 | MTR_4g067290 | 39.048 | 105 | 62 | 2 | 34 | 138 | 76 | 178 | 1.11e-15 | 78.2 |
MS.gene74846.t1 | MTR_4g067290 | 39.048 | 105 | 62 | 2 | 34 | 138 | 74 | 176 | 1.11e-15 | 78.2 |
MS.gene74846.t1 | MTR_4g067290 | 39.048 | 105 | 62 | 2 | 34 | 138 | 116 | 218 | 2.02e-15 | 78.2 |
MS.gene74846.t1 | MTR_2g098920 | 38.095 | 105 | 63 | 2 | 34 | 138 | 80 | 182 | 1.74e-14 | 74.7 |
MS.gene74846.t1 | MTR_6g022070 | 27.219 | 169 | 118 | 1 | 329 | 497 | 1 | 164 | 2.35e-14 | 75.5 |
MS.gene74846.t1 | MTR_5g045210 | 41.573 | 89 | 52 | 0 | 566 | 654 | 20 | 108 | 4.31e-14 | 72.0 |
MS.gene74846.t1 | MTR_2g014100 | 23.039 | 204 | 127 | 4 | 38 | 217 | 48 | 245 | 9.43e-14 | 72.4 |
MS.gene74846.t1 | MTR_0019s0290 | 28.169 | 142 | 90 | 2 | 83 | 213 | 19 | 159 | 1.04e-13 | 70.1 |
MS.gene74846.t1 | MTR_3g006370 | 38.095 | 105 | 63 | 2 | 34 | 137 | 50 | 153 | 1.46e-13 | 71.2 |
MS.gene74846.t1 | MTR_7g061980 | 35.294 | 119 | 73 | 3 | 28 | 145 | 4 | 119 | 2.59e-13 | 67.8 |
MS.gene74846.t1 | MTR_1g019850 | 30.323 | 155 | 99 | 2 | 14 | 167 | 50 | 196 | 2.60e-13 | 70.9 |
MS.gene74846.t1 | MTR_1g055240 | 27.891 | 147 | 94 | 2 | 83 | 218 | 4 | 149 | 4.11e-13 | 68.2 |
MS.gene74846.t1 | MTR_6g022080 | 25.466 | 161 | 113 | 3 | 39 | 195 | 90 | 247 | 1.31e-12 | 68.9 |
MS.gene74846.t1 | MTR_2g098880 | 33.333 | 141 | 83 | 3 | 34 | 172 | 73 | 204 | 1.34e-12 | 69.3 |
MS.gene74846.t1 | MTR_2g098880 | 33.333 | 141 | 83 | 3 | 34 | 172 | 61 | 192 | 1.65e-12 | 68.6 |
MS.gene74846.t1 | MTR_3g450850 | 24.706 | 255 | 168 | 9 | 37 | 274 | 50 | 297 | 2.25e-12 | 69.7 |
MS.gene74846.t1 | MTR_1g091013 | 46.753 | 77 | 30 | 1 | 26 | 102 | 4 | 69 | 3.18e-12 | 62.8 |
MS.gene74846.t1 | MTR_0337s0060 | 26.316 | 190 | 102 | 3 | 403 | 589 | 8 | 162 | 8.08e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74846.t1 | AT4G38180 | 33.934 | 666 | 425 | 9 | 1 | 655 | 39 | 700 | 6.08e-128 | 400 |
MS.gene74846.t1 | AT4G15090 | 29.130 | 690 | 471 | 8 | 34 | 717 | 51 | 728 | 5.88e-98 | 322 |
MS.gene74846.t1 | AT4G15090 | 29.130 | 690 | 471 | 8 | 34 | 717 | 51 | 728 | 5.88e-98 | 322 |
MS.gene74846.t1 | AT4G15090 | 29.130 | 690 | 471 | 8 | 34 | 717 | 51 | 728 | 5.88e-98 | 322 |
MS.gene74846.t1 | AT4G15090 | 29.130 | 690 | 471 | 8 | 34 | 717 | 51 | 728 | 5.88e-98 | 322 |
MS.gene74846.t1 | AT4G15090 | 29.130 | 690 | 471 | 8 | 34 | 717 | 51 | 728 | 5.88e-98 | 322 |
MS.gene74846.t1 | AT1G76320 | 31.240 | 605 | 387 | 13 | 38 | 634 | 1 | 584 | 1.01e-90 | 299 |
MS.gene74846.t1 | AT1G76320 | 28.631 | 723 | 475 | 17 | 38 | 742 | 1 | 700 | 2.39e-90 | 299 |
MS.gene74846.t1 | AT1G76320 | 28.631 | 723 | 475 | 17 | 38 | 742 | 1 | 700 | 2.39e-90 | 299 |
MS.gene74846.t1 | AT1G76320 | 29.126 | 721 | 472 | 18 | 38 | 742 | 1 | 698 | 3.72e-90 | 299 |
MS.gene74846.t1 | AT3G22170 | 29.618 | 628 | 381 | 12 | 31 | 634 | 67 | 657 | 1.20e-89 | 300 |
MS.gene74846.t1 | AT3G22170 | 29.618 | 628 | 381 | 12 | 31 | 634 | 67 | 657 | 1.20e-89 | 300 |
MS.gene74846.t1 | AT2G27110 | 29.734 | 639 | 388 | 18 | 26 | 647 | 41 | 635 | 3.49e-84 | 285 |
MS.gene74846.t1 | AT2G27110 | 29.734 | 639 | 388 | 18 | 26 | 647 | 41 | 635 | 3.49e-84 | 285 |
MS.gene74846.t1 | AT1G10240 | 29.748 | 595 | 393 | 12 | 2 | 586 | 25 | 604 | 1.40e-76 | 261 |
MS.gene74846.t1 | AT1G10240 | 29.748 | 595 | 393 | 12 | 2 | 586 | 25 | 604 | 1.40e-76 | 261 |
MS.gene74846.t1 | AT3G06250 | 28.142 | 565 | 351 | 12 | 34 | 591 | 190 | 706 | 1.55e-74 | 257 |
MS.gene74846.t1 | AT3G06250 | 28.142 | 565 | 351 | 12 | 34 | 591 | 190 | 706 | 1.55e-74 | 257 |
MS.gene74846.t1 | AT3G06250 | 28.142 | 565 | 351 | 12 | 34 | 591 | 190 | 706 | 1.55e-74 | 257 |
MS.gene74846.t1 | AT2G27110 | 32.962 | 449 | 274 | 10 | 213 | 647 | 55 | 490 | 1.68e-73 | 253 |
MS.gene74846.t1 | AT5G18960 | 27.883 | 581 | 360 | 14 | 23 | 591 | 197 | 730 | 3.06e-71 | 249 |
MS.gene74846.t1 | AT5G18960 | 30.252 | 119 | 69 | 2 | 18 | 136 | 27 | 131 | 1.67e-11 | 68.6 |
MS.gene74846.t1 | AT5G18960 | 27.883 | 581 | 360 | 14 | 23 | 591 | 197 | 730 | 3.06e-71 | 249 |
MS.gene74846.t1 | AT5G18960 | 30.252 | 119 | 69 | 2 | 18 | 136 | 27 | 131 | 1.67e-11 | 68.6 |
MS.gene74846.t1 | AT2G32250 | 26.235 | 648 | 418 | 13 | 37 | 676 | 41 | 636 | 9.30e-69 | 241 |
MS.gene74846.t1 | AT2G32250 | 26.235 | 648 | 418 | 13 | 37 | 676 | 41 | 636 | 1.69e-68 | 241 |
MS.gene74846.t1 | AT2G32250 | 26.235 | 648 | 418 | 13 | 37 | 676 | 41 | 636 | 1.69e-68 | 241 |
MS.gene74846.t1 | AT2G32250 | 26.235 | 648 | 418 | 13 | 37 | 676 | 41 | 636 | 1.69e-68 | 241 |
MS.gene74846.t1 | AT2G32250 | 26.235 | 648 | 418 | 13 | 37 | 676 | 41 | 636 | 1.94e-68 | 241 |
MS.gene74846.t1 | AT2G32250 | 26.235 | 648 | 418 | 13 | 37 | 676 | 41 | 636 | 1.94e-68 | 241 |
MS.gene74846.t1 | AT2G32250 | 26.121 | 647 | 418 | 13 | 38 | 676 | 1 | 595 | 7.14e-68 | 239 |
MS.gene74846.t1 | AT2G32250 | 26.121 | 647 | 418 | 13 | 38 | 676 | 1 | 595 | 9.18e-68 | 239 |
MS.gene74846.t1 | AT4G19990 | 27.044 | 636 | 387 | 11 | 37 | 644 | 24 | 610 | 3.35e-61 | 220 |
MS.gene74846.t1 | AT4G19990 | 27.044 | 636 | 387 | 11 | 37 | 644 | 24 | 610 | 3.44e-61 | 220 |
MS.gene74846.t1 | AT4G19990 | 27.044 | 636 | 387 | 11 | 37 | 644 | 24 | 610 | 3.44e-61 | 220 |
MS.gene74846.t1 | AT4G19990 | 27.044 | 636 | 387 | 11 | 37 | 644 | 38 | 624 | 5.21e-61 | 220 |
MS.gene74846.t1 | AT4G19990 | 27.044 | 636 | 387 | 11 | 37 | 644 | 24 | 610 | 5.31e-61 | 220 |
MS.gene74846.t1 | AT4G19990 | 27.044 | 636 | 387 | 11 | 37 | 644 | 24 | 610 | 5.31e-61 | 220 |
MS.gene74846.t1 | AT4G38170 | 29.351 | 385 | 260 | 6 | 213 | 590 | 21 | 400 | 3.68e-60 | 213 |
MS.gene74846.t1 | AT5G28530 | 25.914 | 602 | 405 | 14 | 34 | 609 | 55 | 641 | 1.18e-59 | 214 |
MS.gene74846.t1 | AT5G28530 | 25.748 | 602 | 402 | 14 | 34 | 609 | 55 | 637 | 2.37e-59 | 214 |
MS.gene74846.t1 | AT5G28530 | 25.748 | 602 | 402 | 14 | 34 | 609 | 55 | 637 | 2.37e-59 | 214 |
MS.gene74846.t1 | AT1G52520 | 27.061 | 643 | 403 | 20 | 33 | 644 | 84 | 691 | 1.91e-56 | 206 |
MS.gene74846.t1 | AT4G19990 | 27.000 | 600 | 365 | 12 | 61 | 644 | 11 | 553 | 1.76e-53 | 197 |
MS.gene74846.t1 | AT1G80010 | 25.865 | 607 | 410 | 14 | 19 | 599 | 80 | 672 | 1.68e-52 | 195 |
MS.gene74846.t1 | AT5G28530 | 23.469 | 588 | 374 | 15 | 34 | 609 | 55 | 578 | 4.81e-40 | 157 |
MS.gene74846.t1 | AT5G28530 | 23.459 | 584 | 375 | 14 | 34 | 609 | 55 | 574 | 8.13e-40 | 156 |
MS.gene74846.t1 | AT3G59470 | 39.048 | 105 | 62 | 2 | 34 | 138 | 70 | 172 | 1.94e-16 | 80.5 |
MS.gene74846.t1 | AT3G59470 | 39.048 | 105 | 62 | 2 | 34 | 138 | 70 | 172 | 1.94e-16 | 80.5 |
MS.gene74846.t1 | AT3G59470 | 39.048 | 105 | 62 | 2 | 34 | 138 | 82 | 184 | 3.04e-16 | 80.1 |
MS.gene74846.t1 | AT3G07500 | 37.143 | 105 | 65 | 1 | 34 | 138 | 33 | 136 | 4.17e-15 | 75.5 |
MS.gene74846.t1 | AT2G43280 | 37.391 | 115 | 68 | 3 | 34 | 145 | 22 | 135 | 1.18e-13 | 71.2 |
MS.gene74846.t1 | AT4G12850 | 33.333 | 126 | 77 | 3 | 34 | 159 | 11 | 129 | 2.11e-13 | 68.6 |
MS.gene74846.t1 | AT4G12850 | 35.922 | 103 | 62 | 2 | 34 | 136 | 11 | 109 | 3.46e-12 | 65.1 |
MS.gene74846.t1 | AT4G12850 | 34.951 | 103 | 63 | 2 | 34 | 136 | 11 | 109 | 6.59e-12 | 65.5 |
Find 111 sgRNAs with CRISPR-Local
Find 156 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGCTAATAACAAATATATTT+TGG | 0.088110 | 1.1:-58733426 | MS.gene74846:CDS |
ATGAGATTCTGAAGCTTTAT+TGG | 0.203842 | 1.1:+58732262 | None:intergenic |
TTCCAGATTGTGTCGATAAA+TGG | 0.224458 | 1.1:-58734116 | MS.gene74846:CDS |
TTTGATATTTGTCGAGAATA+TGG | 0.241622 | 1.1:-58733958 | MS.gene74846:CDS |
TTCATCATTCGCAATTGATA+TGG | 0.254192 | 1.1:+58732130 | None:intergenic |
TTTGAAGTCAGATATAAATT+TGG | 0.265489 | 1.1:-58732807 | MS.gene74846:CDS |
ATTTCACTTGATCGAAATAT+AGG | 0.288400 | 1.1:-58733793 | MS.gene74846:CDS |
CTTTAGTGATTGCTTCCTTT+TGG | 0.296517 | 1.1:+58733537 | None:intergenic |
GCACAGATGATTAATGATTA+TGG | 0.297180 | 1.1:-58733397 | MS.gene74846:CDS |
AAGATTCACATGCTTCAAAA+AGG | 0.299081 | 1.1:-58733899 | MS.gene74846:CDS |
AATGATTACAGTAAAAGAAT+TGG | 0.319753 | 1.1:-58733982 | MS.gene74846:CDS |
ATGCGTTGTGCATCCTGTTC+TGG | 0.323008 | 1.1:+58733822 | None:intergenic |
TCGAAATATAGGAAAATATA+TGG | 0.330597 | 1.1:-58733782 | MS.gene74846:CDS |
CATTTCATGGATTGTGCACT+TGG | 0.334162 | 1.1:-58733114 | MS.gene74846:CDS |
TAAGCAAATTCTTAAGGTCT+TGG | 0.340024 | 1.1:+58733563 | None:intergenic |
CATTGTACCGCTTCATGAAA+TGG | 0.342244 | 1.1:+58732312 | None:intergenic |
CACCACTTACAAGACAAATA+AGG | 0.342570 | 1.1:-58733347 | MS.gene74846:CDS |
ACCCATTTATCGACACAATC+TGG | 0.348105 | 1.1:+58734114 | None:intergenic |
CGACCTTTGGGTGTATTTGT+TGG | 0.350273 | 1.1:-58733319 | MS.gene74846:CDS |
ATTGTCTTGGGAGATGAATC+TGG | 0.352705 | 1.1:-58733658 | MS.gene74846:CDS |
GTTGAGTTTCATTGCTTACT+TGG | 0.357841 | 1.1:+58731824 | None:intergenic |
AAATAAGGATTATCGACCTT+TGG | 0.372421 | 1.1:-58733332 | MS.gene74846:CDS |
CTTGGCTTGATTGTGTTGCT+TGG | 0.381074 | 1.1:+58731788 | None:intergenic |
GGAAATAAAAGCATAATAGA+TGG | 0.382034 | 1.1:-58733937 | MS.gene74846:CDS |
CTCTACCCCACCAGCTTGCT+TGG | 0.401329 | 1.1:+58733603 | None:intergenic |
AGCTCAACATAACCACCTTC+TGG | 0.403395 | 1.1:-58733746 | MS.gene74846:CDS |
GCTGGACTCTTCATAAACTT+TGG | 0.408472 | 1.1:+58732220 | None:intergenic |
AATAAGGATTATCGACCTTT+GGG | 0.412280 | 1.1:-58733331 | MS.gene74846:CDS |
ATCCTTATTTGTCTTGTAAG+TGG | 0.412387 | 1.1:+58733345 | None:intergenic |
AAAGAGTTCGAGATTCCGTT+TGG | 0.415306 | 1.1:-58733047 | MS.gene74846:CDS |
TGCCAATAGTGGACCTCACT+TGG | 0.426768 | 1.1:-58734046 | MS.gene74846:CDS |
ATATAAGACAGAATGCTCTT+AGG | 0.429523 | 1.1:-58733090 | MS.gene74846:CDS |
AATTTATATCTGACTTCAAA+TGG | 0.429735 | 1.1:+58732810 | None:intergenic |
ATTAATGATTATGGATACTT+TGG | 0.430083 | 1.1:-58733388 | MS.gene74846:CDS |
AGGTTTAGTACAATCGTTAC+CGG | 0.434065 | 1.1:-58731958 | MS.gene74846:intron |
TCCCAAGTGAGGTCCACTAT+TGG | 0.441740 | 1.1:+58734044 | None:intergenic |
ATTTGGAGTGTAAACATTTG+CGG | 0.445050 | 1.1:+58732658 | None:intergenic |
ATTGTACCGCTTCATGAAAT+GGG | 0.445421 | 1.1:+58732313 | None:intergenic |
TCAAATAACCACTGAAAAGA+AGG | 0.449244 | 1.1:+58733235 | None:intergenic |
GTTTCATTGCTTACTTGGCT+TGG | 0.451828 | 1.1:+58731829 | None:intergenic |
TCCAGATTGTGTCGATAAAT+GGG | 0.451957 | 1.1:-58734115 | MS.gene74846:CDS |
AAAATTACAATGAGTTAACT+TGG | 0.455569 | 1.1:+58731770 | None:intergenic |
TGAAAATCATAAAAGAATGA+TGG | 0.460102 | 1.1:+58733463 | None:intergenic |
GCAAAGGAGAGGATGGTAAT+GGG | 0.464402 | 1.1:-58732539 | MS.gene74846:CDS |
AAAGAAAGTATTGCCAATAG+TGG | 0.465982 | 1.1:-58734057 | MS.gene74846:CDS |
ATGGACAAGAGATGCAAGGC+TGG | 0.468317 | 1.1:-58732384 | MS.gene74846:CDS |
TGCATCTTGATCTGTTAGAA+TGG | 0.469730 | 1.1:+58733174 | None:intergenic |
AGAATTTGCTTAAAACCAAA+AGG | 0.473219 | 1.1:-58733552 | MS.gene74846:CDS |
AACAGGATGCACAACGCATA+TGG | 0.475930 | 1.1:-58733818 | MS.gene74846:CDS |
ATATCAAGATACTTGCATAA+AGG | 0.478662 | 1.1:-58732603 | MS.gene74846:CDS |
AATGGGCATGGGCTTATGTT+CGG | 0.481910 | 1.1:-58732898 | MS.gene74846:CDS |
TGCAAAGGAGAGGATGGTAA+TGG | 0.482903 | 1.1:-58732540 | MS.gene74846:CDS |
TGCATAAAGGAGGTGAAAGA+AGG | 0.483547 | 1.1:-58732590 | MS.gene74846:CDS |
ACAAGCATCACAAATTGTCT+TGG | 0.484770 | 1.1:-58733671 | MS.gene74846:CDS |
TTGTTTGAAATATGTCATCA+AGG | 0.487222 | 1.1:+58733498 | None:intergenic |
ATATATTGATGCAACTCTCT+TGG | 0.487795 | 1.1:+58733628 | None:intergenic |
GACACCGTTGGCAAGGCAAA+AGG | 0.491738 | 1.1:-58732092 | MS.gene74846:CDS |
AAAGGGCTGTCAATGCTAAA+CGG | 0.496120 | 1.1:-58732763 | MS.gene74846:CDS |
GATGGTAATGGGAAATCCTA+TGG | 0.503211 | 1.1:-58732528 | MS.gene74846:CDS |
CAAGCATCACAAATTGTCTT+GGG | 0.505716 | 1.1:-58733670 | MS.gene74846:CDS |
GCCTAAATTGAAAATGAAGA+AGG | 0.516431 | 1.1:-58732699 | MS.gene74846:CDS |
TGATGATGCAAAGGAGAGGA+TGG | 0.522123 | 1.1:-58732546 | MS.gene74846:CDS |
TCTAGAGCAGAAACCAGAAC+AGG | 0.523760 | 1.1:-58733835 | MS.gene74846:CDS |
GAAGTAATCAAGGTTGGAGT+GGG | 0.524671 | 1.1:-58732361 | MS.gene74846:CDS |
AACACTACATACTAAAACGA+TGG | 0.530470 | 1.1:-58732403 | MS.gene74846:CDS |
GCAAGGCTGGGAAGTAATCA+AGG | 0.534455 | 1.1:-58732371 | MS.gene74846:CDS |
GGCTGGGAAGTAATCAAGGT+TGG | 0.541437 | 1.1:-58732367 | MS.gene74846:CDS |
ATCACTAAAGTACGGTGAAG+TGG | 0.545460 | 1.1:-58733524 | MS.gene74846:CDS |
TGCATGCTTCAAAATCCAAA+CGG | 0.549062 | 1.1:+58733032 | None:intergenic |
GCAGTTTGAATCTGAGGCGG+TGG | 0.555318 | 1.1:-58734019 | MS.gene74846:CDS |
GTTCGGAAAACATTCACGGC+AGG | 0.564623 | 1.1:-58732881 | MS.gene74846:CDS |
TCACTAAAGTACGGTGAAGT+GGG | 0.566903 | 1.1:-58733523 | MS.gene74846:CDS |
GGGAATGCAGTTTGAATCTG+AGG | 0.567573 | 1.1:-58734025 | MS.gene74846:CDS |
GTGCCTCAGATATGTGTCGA+TGG | 0.570120 | 1.1:+58733692 | None:intergenic |
GCCAATAGTGGACCTCACTT+GGG | 0.571514 | 1.1:-58734045 | MS.gene74846:CDS |
AACAGATCAAGATGCAGCAA+TGG | 0.573110 | 1.1:-58733167 | MS.gene74846:CDS |
TATATATCCAAGCAAGCTGG+TGG | 0.573855 | 1.1:-58733610 | MS.gene74846:CDS |
CACAAATTATGATGATGCAA+AGG | 0.574477 | 1.1:-58732555 | MS.gene74846:CDS |
TTATGTTCGGAAAACATTCA+CGG | 0.576310 | 1.1:-58732885 | MS.gene74846:CDS |
CAACATAGACACCGTTGGCA+AGG | 0.578457 | 1.1:-58732099 | MS.gene74846:CDS |
TGGACAAGAGATGCAAGGCT+GGG | 0.580811 | 1.1:-58732383 | MS.gene74846:CDS |
GTAATCAAGGTTGGAGTGGG+AGG | 0.581542 | 1.1:-58732358 | MS.gene74846:CDS |
AGGAAGCAATCACTAAAGTA+CGG | 0.581592 | 1.1:-58733532 | MS.gene74846:CDS |
CGAATCATATGAACATACTC+AGG | 0.583230 | 1.1:+58733718 | None:intergenic |
CAATATATATCCAAGCAAGC+TGG | 0.584632 | 1.1:-58733613 | MS.gene74846:CDS |
TATATCCAAGCAAGCTGGTG+GGG | 0.587725 | 1.1:-58733608 | MS.gene74846:CDS |
GGATGGAGAATCAAGTGGAA+TGG | 0.591122 | 1.1:-58732162 | MS.gene74846:CDS |
GGAAGTAATCAAGGTTGGAG+TGG | 0.603856 | 1.1:-58732362 | MS.gene74846:CDS |
TGCCTCAGATATGTGTCGAT+GGG | 0.604423 | 1.1:+58733693 | None:intergenic |
TTGGTCAATTTAAGCAACTG+AGG | 0.614247 | 1.1:+58732281 | None:intergenic |
TCTGCTCTAGACTCCGCCGT+CGG | 0.614843 | 1.1:+58733847 | None:intergenic |
TCAAGATACTTGCATAAAGG+AGG | 0.621392 | 1.1:-58732600 | MS.gene74846:CDS |
AACGATGGACAAGAGATGCA+AGG | 0.621531 | 1.1:-58732388 | MS.gene74846:CDS |
GCTGGTGGGGTAGAGACTGT+CGG | 0.623303 | 1.1:-58733595 | MS.gene74846:CDS |
TGTCATAAATTTGAGACACA+TGG | 0.630370 | 1.1:-58732485 | MS.gene74846:CDS |
ATATATCCAAGCAAGCTGGT+GGG | 0.631572 | 1.1:-58733609 | MS.gene74846:CDS |
AGTCCAACAAATACACCCAA+AGG | 0.632966 | 1.1:+58733316 | None:intergenic |
GGCAAAAGGCATAAAGACGA+AGG | 0.643397 | 1.1:-58732078 | MS.gene74846:CDS |
GACAACAACATAGACACCGT+TGG | 0.650357 | 1.1:-58732104 | MS.gene74846:CDS |
TCAAACTGCATTCCCAAGTG+AGG | 0.657944 | 1.1:+58734033 | None:intergenic |
ATCATATGAACATACTCAGG+TGG | 0.658150 | 1.1:+58733721 | None:intergenic |
CATACTCAGGTGGAACCAGA+AGG | 0.658672 | 1.1:+58733731 | None:intergenic |
TGACAAAAGACGTCAACCGA+CGG | 0.667263 | 1.1:-58733863 | MS.gene74846:CDS |
ATGCATAGATCTACACGAGG+AGG | 0.676939 | 1.1:-58733014 | MS.gene74846:CDS |
ATTATGATGATGCAAAGGAG+AGG | 0.681674 | 1.1:-58732550 | MS.gene74846:CDS |
CTCCCATCGACACATATCTG+AGG | 0.683683 | 1.1:-58733695 | MS.gene74846:CDS |
TATCTGGATGGAGAATCAAG+TGG | 0.685001 | 1.1:-58732167 | MS.gene74846:CDS |
ACTCAGGTGGAACCAGAAGG+TGG | 0.690819 | 1.1:+58733734 | None:intergenic |
CAAAAGACGTCAACCGACGG+CGG | 0.706901 | 1.1:-58733860 | MS.gene74846:CDS |
AATGCAGTTTGAATCTGAGG+CGG | 0.731388 | 1.1:-58734022 | MS.gene74846:CDS |
AGCATGCATAGATCTACACG+AGG | 0.758431 | 1.1:-58733017 | MS.gene74846:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGAAAAGTTAAATAAATGAT+AGG | + | chr1.1:58734015-58734034 | None:intergenic | 15.0% |
!!! | AATTTTTTACTCACTTTAAA+AGG | - | chr1.1:58733125-58733144 | MS.gene74846:CDS | 15.0% |
!!! | AGCTAATAACAAATATATTT+TGG | - | chr1.1:58732480-58732499 | MS.gene74846:CDS | 15.0% |
!!! | ATTCTTTTATGATTTTCAAA+TGG | - | chr1.1:58732448-58732467 | MS.gene74846:CDS | 15.0% |
!!! | ATTTTTTACTCACTTTAAAA+GGG | - | chr1.1:58733126-58733145 | MS.gene74846:CDS | 15.0% |
!!! | GCTAATAACAAATATATTTT+GGG | - | chr1.1:58732481-58732500 | MS.gene74846:CDS | 15.0% |
!!! | TTTTAAATTGAAGGAAAAAT+GGG | - | chr1.1:58732991-58733010 | MS.gene74846:CDS | 15.0% |
!!! | TTTTTAAATTGAAGGAAAAA+TGG | - | chr1.1:58732990-58733009 | MS.gene74846:CDS | 15.0% |
!! | AAAAAGAAAAAATCTCAAGA+AGG | - | chr1.1:58733928-58733947 | MS.gene74846:CDS | 20.0% |
!! | AATGATTACAGTAAAAGAAT+TGG | - | chr1.1:58731924-58731943 | MS.gene74846:intron | 20.0% |
!! | AATTTATATCTGACTTCAAA+TGG | + | chr1.1:58733099-58733118 | None:intergenic | 20.0% |
!! | ATACAAAAAAATATACGTAC+CGG | + | chr1.1:58733970-58733989 | None:intergenic | 20.0% |
!! | ATTAATGATTATGGATACTT+TGG | - | chr1.1:58732518-58732537 | MS.gene74846:CDS | 20.0% |
!! | TCGAAATATAGGAAAATATA+TGG | - | chr1.1:58732124-58732143 | MS.gene74846:CDS | 20.0% |
!! | TGAAAATCATAAAAGAATGA+TGG | + | chr1.1:58732446-58732465 | None:intergenic | 20.0% |
!! | TGAAATTCCTCAAAAAAATT+TGG | + | chr1.1:58733268-58733287 | None:intergenic | 20.0% |
!!! | AAAGTGAATTTTTGAATGAA+TGG | - | chr1.1:58732915-58732934 | MS.gene74846:CDS | 20.0% |
!!! | AATAACAAATATATTTTGGG+TGG | - | chr1.1:58732484-58732503 | MS.gene74846:CDS | 20.0% |
!!! | GCATTCAATTTTTAAATTGA+AGG | - | chr1.1:58732982-58733001 | MS.gene74846:CDS | 20.0% |
!!! | TTTGAAGTCAGATATAAATT+TGG | - | chr1.1:58733099-58733118 | MS.gene74846:CDS | 20.0% |
! | ATATCAAGATACTTGCATAA+AGG | - | chr1.1:58733303-58733322 | MS.gene74846:CDS | 25.0% |
! | ATTTCACTTGATCGAAATAT+AGG | - | chr1.1:58732113-58732132 | MS.gene74846:CDS | 25.0% |
! | GTAAAAAACGTTATATGTCT+TGG | - | chr1.1:58733866-58733885 | MS.gene74846:CDS | 25.0% |
! | TATGTTGTCCAAAAAATATC+TGG | - | chr1.1:58733723-58733742 | MS.gene74846:CDS | 25.0% |
! | TTTGATATTTGTCGAGAATA+TGG | - | chr1.1:58731948-58731967 | MS.gene74846:intron | 25.0% |
!! | AGAATTTGCTTAAAACCAAA+AGG | - | chr1.1:58732354-58732373 | MS.gene74846:CDS | 25.0% |
!! | CATATCATTAACTATTTTGC+TGG | + | chr1.1:58733707-58733726 | None:intergenic | 25.0% |
!! | GGAAATAAAAGCATAATAGA+TGG | - | chr1.1:58731969-58731988 | MS.gene74846:CDS | 25.0% |
!! | TTGTTTGAAATATGTCATCA+AGG | + | chr1.1:58732411-58732430 | None:intergenic | 25.0% |
!!! | ATAATGTTTTGAAAGATTCG+TGG | - | chr1.1:58732957-58732976 | MS.gene74846:CDS | 25.0% |
!!! | TGGTTTTAAGCAAATTCTTA+AGG | + | chr1.1:58732352-58732371 | None:intergenic | 25.0% |
!!! | TTACACTCCAAATTTTTTTG+AGG | - | chr1.1:58733258-58733277 | MS.gene74846:CDS | 25.0% |
!!! | TTTTTTTGAGGAATTTCAAG+AGG | - | chr1.1:58733270-58733289 | MS.gene74846:CDS | 25.0% |
AAATAAGGATTATCGACCTT+TGG | - | chr1.1:58732574-58732593 | MS.gene74846:CDS | 30.0% | |
AACACTACATACTAAAACGA+TGG | - | chr1.1:58733503-58733522 | MS.gene74846:CDS | 30.0% | |
AAGATTCACATGCTTCAAAA+AGG | - | chr1.1:58732007-58732026 | MS.gene74846:CDS | 30.0% | |
AATAAGGATTATCGACCTTT+GGG | - | chr1.1:58732575-58732594 | MS.gene74846:CDS | 30.0% | |
AGATTCACATGCTTCAAAAA+GGG | - | chr1.1:58732008-58732027 | MS.gene74846:CDS | 30.0% | |
ATATAAGACAGAATGCTCTT+AGG | - | chr1.1:58732816-58732835 | MS.gene74846:CDS | 30.0% | |
ATATATTGATGCAACTCTCT+TGG | + | chr1.1:58732281-58732300 | None:intergenic | 30.0% | |
GCACAGATGATTAATGATTA+TGG | - | chr1.1:58732509-58732528 | MS.gene74846:CDS | 30.0% | |
GCCTAAATTGAAAATGAAGA+AGG | - | chr1.1:58733207-58733226 | MS.gene74846:CDS | 30.0% | |
GTTATGCCAAAAACATTTCA+TGG | - | chr1.1:58732779-58732798 | MS.gene74846:CDS | 30.0% | |
TAAGCAAATTCTTAAGGTCT+TGG | + | chr1.1:58732346-58732365 | None:intergenic | 30.0% | |
TCAAATAACCACTGAAAAGA+AGG | + | chr1.1:58732674-58732693 | None:intergenic | 30.0% | |
TTATGTTCGGAAAACATTCA+CGG | - | chr1.1:58733021-58733040 | MS.gene74846:CDS | 30.0% | |
TTCATCATTCGCAATTGATA+TGG | + | chr1.1:58733779-58733798 | None:intergenic | 30.0% | |
TTGTCCAAAAAATATCTGGA+TGG | - | chr1.1:58733727-58733746 | MS.gene74846:CDS | 30.0% | |
! | AAACAATTCCTTCTTTTCAG+TGG | - | chr1.1:58732663-58732682 | MS.gene74846:CDS | 30.0% |
! | ATCCTTATTTGTCTTGTAAG+TGG | + | chr1.1:58732564-58732583 | None:intergenic | 30.0% |
! | ATTTGGAGTGTAAACATTTG+CGG | + | chr1.1:58733251-58733270 | None:intergenic | 30.0% |
! | CAAGAAACTTTTTGTTCCAT+AGG | + | chr1.1:58733397-58733416 | None:intergenic | 30.0% |
! | CACAAATTATGATGATGCAA+AGG | - | chr1.1:58733351-58733370 | MS.gene74846:CDS | 30.0% |
! | CACAATCCATGAAATGTTTT+TGG | + | chr1.1:58732788-58732807 | None:intergenic | 30.0% |
! | GCCTTCTTCATTTTCAATTT+AGG | + | chr1.1:58733211-58733230 | None:intergenic | 30.0% |
! | TCGAACTCTTTTGATATAGA+TGG | + | chr1.1:58732850-58732869 | None:intergenic | 30.0% |
! | TGATCTGTTAGAATGGTTTT+AGG | + | chr1.1:58732728-58732747 | None:intergenic | 30.0% |
! | TGTCATAAATTTGAGACACA+TGG | - | chr1.1:58733421-58733440 | MS.gene74846:CDS | 30.0% |
!! | AAAGAAAGTATTGCCAATAG+TGG | - | chr1.1:58731849-58731868 | MS.gene74846:CDS | 30.0% |
!! | ATGAGATTCTGAAGCTTTAT+TGG | + | chr1.1:58733647-58733666 | None:intergenic | 30.0% |
!! | GAAACTTTTCTGAAAGCAAT+GGG | - | chr1.1:58732692-58732711 | MS.gene74846:CDS | 30.0% |
!! | TCGTTTTAGTATGTAGTGTT+CGG | + | chr1.1:58733503-58733522 | None:intergenic | 30.0% |
!! | TGAAACTTTTCTGAAAGCAA+TGG | - | chr1.1:58732691-58732710 | MS.gene74846:CDS | 30.0% |
!!! | TAACGTTTTTTACTCTTACG+TGG | + | chr1.1:58733859-58733878 | None:intergenic | 30.0% |
!!! | TTCTCCATCCAGATATTTTT+TGG | + | chr1.1:58733734-58733753 | None:intergenic | 30.0% |
AAAAAGCCCATTTCATGAAG+CGG | - | chr1.1:58733587-58733606 | MS.gene74846:CDS | 35.0% | |
AATTGAAGGAAAAATGGGCA+TGG | - | chr1.1:58732996-58733015 | MS.gene74846:CDS | 35.0% | |
ACAAGCATCACAAATTGTCT+TGG | - | chr1.1:58732235-58732254 | MS.gene74846:CDS | 35.0% | |
AGGAAGCAATCACTAAAGTA+CGG | - | chr1.1:58732374-58732393 | MS.gene74846:CDS | 35.0% | |
AGGTTTAGTACAATCGTTAC+CGG | - | chr1.1:58733948-58733967 | MS.gene74846:CDS | 35.0% | |
ATCATATGAACATACTCAGG+TGG | + | chr1.1:58732188-58732207 | None:intergenic | 35.0% | |
ATTGAAGGAAAAATGGGCAT+GGG | - | chr1.1:58732997-58733016 | MS.gene74846:CDS | 35.0% | |
ATTGTACCGCTTCATGAAAT+GGG | + | chr1.1:58733596-58733615 | None:intergenic | 35.0% | |
CAAGCATCACAAATTGTCTT+GGG | - | chr1.1:58732236-58732255 | MS.gene74846:CDS | 35.0% | |
CAATATATATCCAAGCAAGC+TGG | - | chr1.1:58732293-58732312 | MS.gene74846:CDS | 35.0% | |
CACCACTTACAAGACAAATA+AGG | - | chr1.1:58732559-58732578 | MS.gene74846:CDS | 35.0% | |
CGAATCATATGAACATACTC+AGG | + | chr1.1:58732191-58732210 | None:intergenic | 35.0% | |
GTTGAGTTTCATTGCTTACT+TGG | + | chr1.1:58734085-58734104 | None:intergenic | 35.0% | |
TCAAGATACTTGCATAAAGG+AGG | - | chr1.1:58733306-58733325 | MS.gene74846:CDS | 35.0% | |
TGCATCTTGATCTGTTAGAA+TGG | + | chr1.1:58732735-58732754 | None:intergenic | 35.0% | |
TGCATGCTTCAAAATCCAAA+CGG | + | chr1.1:58732877-58732896 | None:intergenic | 35.0% | |
TTGGTCAATTTAAGCAACTG+AGG | + | chr1.1:58733628-58733647 | None:intergenic | 35.0% | |
! | ATTATGATGATGCAAAGGAG+AGG | - | chr1.1:58733356-58733375 | MS.gene74846:CDS | 35.0% |
! | CGTGATGAACATTTTGTTCA+TGG | + | chr1.1:58731827-58731846 | None:intergenic | 35.0% |
! | CTTTAGTGATTGCTTCCTTT+TGG | + | chr1.1:58732372-58732391 | None:intergenic | 35.0% |
! | TCCAGATTGTGTCGATAAAT+GGG | - | chr1.1:58731791-58731810 | MS.gene74846:CDS | 35.0% |
! | TTCCAGATTGTGTCGATAAA+TGG | - | chr1.1:58731790-58731809 | MS.gene74846:CDS | 35.0% |
!! | CGTTTTAGTATGTAGTGTTC+GGG | + | chr1.1:58733502-58733521 | None:intergenic | 35.0% |
!!! | ACAGACAAACCGTCATTTTT+GGG | - | chr1.1:58732621-58732640 | MS.gene74846:CDS | 35.0% |
AAAGAGTTCGAGATTCCGTT+TGG | - | chr1.1:58732859-58732878 | MS.gene74846:CDS | 40.0% | |
AAAGGGCTGTCAATGCTAAA+CGG | - | chr1.1:58733143-58733162 | MS.gene74846:CDS | 40.0% | |
AACAGATCAAGATGCAGCAA+TGG | - | chr1.1:58732739-58732758 | MS.gene74846:CDS | 40.0% | |
AATGCAGTTTGAATCTGAGG+CGG | - | chr1.1:58731884-58731903 | MS.gene74846:intron | 40.0% | |
ACCCATTTATCGACACAATC+TGG | + | chr1.1:58731795-58731814 | None:intergenic | 40.0% | |
AGTCCAACAAATACACCCAA+AGG | + | chr1.1:58732593-58732612 | None:intergenic | 40.0% | |
ATATATCCAAGCAAGCTGGT+GGG | - | chr1.1:58732297-58732316 | MS.gene74846:CDS | 40.0% | |
ATCACTAAAGTACGGTGAAG+TGG | - | chr1.1:58732382-58732401 | MS.gene74846:CDS | 40.0% | |
ATTGTCTTGGGAGATGAATC+TGG | - | chr1.1:58732248-58732267 | MS.gene74846:CDS | 40.0% | |
CAATGTTGCCCCAAAAATGA+CGG | + | chr1.1:58732633-58732652 | None:intergenic | 40.0% | |
CATTGTACCGCTTCATGAAA+TGG | + | chr1.1:58733597-58733616 | None:intergenic | 40.0% | |
GAAGTAATCAAGGTTGGAGT+GGG | - | chr1.1:58733545-58733564 | MS.gene74846:CDS | 40.0% | |
GCTGGACTCTTCATAAACTT+TGG | + | chr1.1:58733689-58733708 | None:intergenic | 40.0% | |
GTTTCATTGCTTACTTGGCT+TGG | + | chr1.1:58734080-58734099 | None:intergenic | 40.0% | |
TATATATCCAAGCAAGCTGG+TGG | - | chr1.1:58732296-58732315 | MS.gene74846:CDS | 40.0% | |
TATCTGGATGGAGAATCAAG+TGG | - | chr1.1:58733739-58733758 | MS.gene74846:CDS | 40.0% | |
TCACTAAAGTACGGTGAAGT+GGG | - | chr1.1:58732383-58732402 | MS.gene74846:CDS | 40.0% | |
TGCATAAAGGAGGTGAAAGA+AGG | - | chr1.1:58733316-58733335 | MS.gene74846:CDS | 40.0% | |
! | CATTTCATGGATTGTGCACT+TGG | - | chr1.1:58732792-58732811 | MS.gene74846:CDS | 40.0% |
!! | ACTTTTCTGAAAGCAATGGG+TGG | - | chr1.1:58732695-58732714 | MS.gene74846:CDS | 40.0% |
!! | CACAGACAAACCGTCATTTT+TGG | - | chr1.1:58732620-58732639 | MS.gene74846:CDS | 40.0% |
!! | GATGGTAATGGGAAATCCTA+TGG | - | chr1.1:58733378-58733397 | MS.gene74846:CDS | 40.0% |
!! | GCTTCATGAAATGGGCTTTT+TGG | + | chr1.1:58733588-58733607 | None:intergenic | 40.0% |
!!! | CAGACAAACCGTCATTTTTG+GGG | - | chr1.1:58732622-58732641 | MS.gene74846:CDS | 40.0% |
AACAGGATGCACAACGCATA+TGG | - | chr1.1:58732088-58732107 | MS.gene74846:CDS | 45.0% | |
AACGATGGACAAGAGATGCA+AGG | - | chr1.1:58733518-58733537 | MS.gene74846:CDS | 45.0% | |
AATGGGCATGGGCTTATGTT+CGG | - | chr1.1:58733008-58733027 | MS.gene74846:CDS | 45.0% | |
AGCATGCATAGATCTACACG+AGG | - | chr1.1:58732889-58732908 | MS.gene74846:CDS | 45.0% | |
AGCTCAACATAACCACCTTC+TGG | - | chr1.1:58732160-58732179 | MS.gene74846:CDS | 45.0% | |
ATGCATAGATCTACACGAGG+AGG | - | chr1.1:58732892-58732911 | MS.gene74846:CDS | 45.0% | |
CGACCTTTGGGTGTATTTGT+TGG | - | chr1.1:58732587-58732606 | MS.gene74846:CDS | 45.0% | |
GACAACAACATAGACACCGT+TGG | - | chr1.1:58733802-58733821 | MS.gene74846:CDS | 45.0% | |
GCAAAGGAGAGGATGGTAAT+GGG | - | chr1.1:58733367-58733386 | MS.gene74846:CDS | 45.0% | |
GGAAGTAATCAAGGTTGGAG+TGG | - | chr1.1:58733544-58733563 | MS.gene74846:CDS | 45.0% | |
GGATGGAGAATCAAGTGGAA+TGG | - | chr1.1:58733744-58733763 | MS.gene74846:CDS | 45.0% | |
GGGAATGCAGTTTGAATCTG+AGG | - | chr1.1:58731881-58731900 | MS.gene74846:intron | 45.0% | |
TATATCCAAGCAAGCTGGTG+GGG | - | chr1.1:58732298-58732317 | MS.gene74846:CDS | 45.0% | |
TCAAACTGCATTCCCAAGTG+AGG | + | chr1.1:58731876-58731895 | None:intergenic | 45.0% | |
TGACAAAAGACGTCAACCGA+CGG | - | chr1.1:58732043-58732062 | MS.gene74846:CDS | 45.0% | |
TGCAAAGGAGAGGATGGTAA+TGG | - | chr1.1:58733366-58733385 | MS.gene74846:CDS | 45.0% | |
! | CTTGGCTTGATTGTGTTGCT+TGG | + | chr1.1:58734121-58734140 | None:intergenic | 45.0% |
! | GGCAAAAGGCATAAAGACGA+AGG | - | chr1.1:58733828-58733847 | MS.gene74846:CDS | 45.0% |
! | TATGCCTTTTGCCTTGCCAA+CGG | + | chr1.1:58733821-58733840 | None:intergenic | 45.0% |
! | TCTAGAGCAGAAACCAGAAC+AGG | - | chr1.1:58732071-58732090 | MS.gene74846:CDS | 45.0% |
! | TGATGATGCAAAGGAGAGGA+TGG | - | chr1.1:58733360-58733379 | MS.gene74846:CDS | 45.0% |
! | TGCCTCAGATATGTGTCGAT+GGG | + | chr1.1:58732216-58732235 | None:intergenic | 45.0% |
ATGCGTTGTGCATCCTGTTC+TGG | + | chr1.1:58732087-58732106 | None:intergenic | 50.0% | |
ATGGACAAGAGATGCAAGGC+TGG | - | chr1.1:58733522-58733541 | MS.gene74846:CDS | 50.0% | |
CAACATAGACACCGTTGGCA+AGG | - | chr1.1:58733807-58733826 | MS.gene74846:CDS | 50.0% | |
CATACTCAGGTGGAACCAGA+AGG | + | chr1.1:58732178-58732197 | None:intergenic | 50.0% | |
CTCCCATCGACACATATCTG+AGG | - | chr1.1:58732211-58732230 | MS.gene74846:CDS | 50.0% | |
GCAAGGCTGGGAAGTAATCA+AGG | - | chr1.1:58733535-58733554 | MS.gene74846:CDS | 50.0% | |
GGCTGGGAAGTAATCAAGGT+TGG | - | chr1.1:58733539-58733558 | MS.gene74846:CDS | 50.0% | |
GTAATCAAGGTTGGAGTGGG+AGG | - | chr1.1:58733548-58733567 | MS.gene74846:CDS | 50.0% | |
GTGCCTCAGATATGTGTCGA+TGG | + | chr1.1:58732217-58732236 | None:intergenic | 50.0% | |
GTTCGGAAAACATTCACGGC+AGG | - | chr1.1:58733025-58733044 | MS.gene74846:CDS | 50.0% | |
TCCCAAGTGAGGTCCACTAT+TGG | + | chr1.1:58731865-58731884 | None:intergenic | 50.0% | |
TGGACAAGAGATGCAAGGCT+GGG | - | chr1.1:58733523-58733542 | MS.gene74846:CDS | 50.0% | |
!! | GCCAATAGTGGACCTCACTT+GGG | - | chr1.1:58731861-58731880 | MS.gene74846:CDS | 50.0% |
!! | TGCCAATAGTGGACCTCACT+TGG | - | chr1.1:58731860-58731879 | MS.gene74846:CDS | 50.0% |
ACTCAGGTGGAACCAGAAGG+TGG | + | chr1.1:58732175-58732194 | None:intergenic | 55.0% | |
CAAAAGACGTCAACCGACGG+CGG | - | chr1.1:58732046-58732065 | MS.gene74846:CDS | 55.0% | |
GACACCGTTGGCAAGGCAAA+AGG | - | chr1.1:58733814-58733833 | MS.gene74846:CDS | 55.0% | |
! | GCAGTTTGAATCTGAGGCGG+TGG | - | chr1.1:58731887-58731906 | MS.gene74846:intron | 55.0% |
GCTGGTGGGGTAGAGACTGT+CGG | - | chr1.1:58732311-58732330 | MS.gene74846:CDS | 60.0% | |
! | CTCTACCCCACCAGCTTGCT+TGG | + | chr1.1:58732306-58732325 | None:intergenic | 60.0% |
! | TCTGCTCTAGACTCCGCCGT+CGG | + | chr1.1:58732062-58732081 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 58731774 | 58734154 | 58731774 | ID=MS.gene74846 |
chr1.1 | mRNA | 58731774 | 58734154 | 58731774 | ID=MS.gene74846.t1;Parent=MS.gene74846 |
chr1.1 | exon | 58731959 | 58734154 | 58731959 | ID=MS.gene74846.t1.exon1;Parent=MS.gene74846.t1 |
chr1.1 | CDS | 58731959 | 58734154 | 58731959 | ID=cds.MS.gene74846.t1;Parent=MS.gene74846.t1 |
chr1.1 | exon | 58731774 | 58731881 | 58731774 | ID=MS.gene74846.t1.exon2;Parent=MS.gene74846.t1 |
chr1.1 | CDS | 58731774 | 58731881 | 58731774 | ID=cds.MS.gene74846.t1;Parent=MS.gene74846.t1 |
Gene Sequence |
Protein sequence |