Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74848.t1 | XP_004495541.1 | 88.3 | 795 | 88 | 3 | 1 | 791 | 1 | 794 | 0.00E+00 | 1287.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74848.t1 | Q55GS2 | 36.7 | 610 | 351 | 13 | 9 | 607 | 7 | 592 | 1.2e-104 | 382.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74848.t1 | A0A1S2XWA4 | 88.3 | 795 | 88 | 3 | 1 | 791 | 1 | 794 | 0.0e+00 | 1287.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74848.t1 | MTR_6g086565 | 86.826 | 797 | 97 | 4 | 1 | 790 | 1 | 796 | 0.0 | 1353 |
MS.gene74848.t1 | MTR_6g086565 | 90.953 | 619 | 55 | 1 | 1 | 618 | 1 | 619 | 0.0 | 1121 |
MS.gene74848.t1 | MTR_1g078330 | 95.789 | 190 | 8 | 0 | 1 | 190 | 1 | 190 | 2.22e-130 | 386 |
MS.gene74848.t1 | MTR_1g078370 | 88.835 | 206 | 22 | 1 | 586 | 791 | 1 | 205 | 2.27e-111 | 337 |
MS.gene74848.t1 | MTR_4g030910 | 22.500 | 560 | 367 | 13 | 58 | 576 | 96 | 629 | 5.19e-24 | 108 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74848.t1 | AT2G40730 | 74.125 | 800 | 196 | 7 | 1 | 791 | 1 | 798 | 0.0 | 1125 |
MS.gene74848.t1 | AT1G71410 | 21.154 | 468 | 308 | 10 | 58 | 483 | 96 | 544 | 1.92e-16 | 84.7 |
MS.gene74848.t1 | AT1G71410 | 21.154 | 468 | 308 | 10 | 58 | 483 | 96 | 544 | 1.92e-16 | 84.7 |
MS.gene74848.t1 | AT1G22870 | 20.321 | 561 | 378 | 12 | 58 | 576 | 96 | 629 | 2.19e-16 | 84.3 |
MS.gene74848.t1 | AT1G22870 | 20.321 | 561 | 378 | 12 | 58 | 576 | 96 | 629 | 3.19e-16 | 84.0 |
MS.gene74848.t1 | AT1G22870 | 20.638 | 470 | 333 | 9 | 133 | 576 | 9 | 464 | 5.83e-15 | 79.7 |
Find 200 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCGACATCTGCCAGCTAATA+AGG | 0.143427 | 1.1:-58769562 | None:intergenic |
CTCCATGGGCCATTGATTCT+TGG | 0.161710 | 1.1:+58761315 | MS.gene74848:CDS |
ATCCGCTGAGCACCTAATTT+TGG | 0.180093 | 1.1:-58769603 | None:intergenic |
TTAGCTTCTTCCCTTGAATT+TGG | 0.192208 | 1.1:+58764048 | MS.gene74848:CDS |
GCTCAACTTTGGTGTAGTTT+TGG | 0.206962 | 1.1:-58769391 | None:intergenic |
GGAAGCTGCTCTGCTGAATT+TGG | 0.212704 | 1.1:-58763902 | None:intergenic |
GATCAGCAGGTTTGCCCTTC+AGG | 0.243603 | 1.1:-58767956 | None:intergenic |
AAACCTGCTGCTCCAAAATT+AGG | 0.271088 | 1.1:+58769591 | MS.gene74848:CDS |
CTGATGATGCTGCTGCTGCC+CGG | 0.276113 | 1.1:+58769499 | MS.gene74848:CDS |
CCTTGTCTGTGTCATTATTA+AGG | 0.278895 | 1.1:+58765821 | MS.gene74848:CDS |
ATCTTGATTGTCAGGCATTA+TGG | 0.280054 | 1.1:+58766494 | MS.gene74848:intron |
TCCATGGGCCATTGATTCTT+GGG | 0.284461 | 1.1:+58761316 | MS.gene74848:CDS |
CCAAGTAAACTTGCATTTGC+TGG | 0.285117 | 1.1:-58767611 | None:intergenic |
TTATCAGACAATGGCATTAC+AGG | 0.290598 | 1.1:-58759765 | None:intergenic |
TCTTAAGTCCATGTTAGTTC+TGG | 0.291164 | 1.1:+58764533 | MS.gene74848:CDS |
CCAGCAAATGCAAGTTTACT+TGG | 0.294717 | 1.1:+58767611 | MS.gene74848:CDS |
CTTTGTTTGTTGCAGATTCA+TGG | 0.297338 | 1.1:+58760633 | MS.gene74848:intron |
GCCATTGTCTGATAAGATTA+AGG | 0.305932 | 1.1:+58759773 | MS.gene74848:CDS |
CTCCAACATATTGATCAATA+TGG | 0.316335 | 1.1:+58764294 | MS.gene74848:CDS |
ACTCTTCCGCTTGGGGCTCT+TGG | 0.338646 | 1.1:+58759195 | MS.gene74848:CDS |
CTTCTACATCGACCGGTGAC+TGG | 0.339923 | 1.1:+58768707 | MS.gene74848:CDS |
TGATGATGCTGCTGCTGCCC+GGG | 0.340046 | 1.1:+58769500 | MS.gene74848:CDS |
TTCAGCAACCACTGGTAATC+TGG | 0.340908 | 1.1:-58762943 | None:intergenic |
AAACAGTGATGTTCGATCTA+AGG | 0.351656 | 1.1:+58766728 | MS.gene74848:intron |
ATACCGTTTGTCTGTGAAAC+AGG | 0.352541 | 1.1:-58768868 | None:intergenic |
TTGGCCCTTGTAGTGGGTGC+AGG | 0.364858 | 1.1:-58769537 | None:intergenic |
TCTGATAAGATTAAGGAGTT+AGG | 0.377819 | 1.1:+58759780 | MS.gene74848:CDS |
GTTTACCCTCATGTTGCTAC+TGG | 0.382745 | 1.1:+58764474 | MS.gene74848:CDS |
CGGATAATCCGGACACCATC+CGG | 0.385981 | 1.1:+58769621 | MS.gene74848:CDS |
GGTAGACACAATACATTTCA+TGG | 0.388081 | 1.1:+58763826 | MS.gene74848:CDS |
CAGGAGCTGCACTGGCAGCC+CGG | 0.389163 | 1.1:-58769518 | None:intergenic |
TCTTCATCCTTGCTCAACTT+TGG | 0.389388 | 1.1:-58769402 | None:intergenic |
CGAACCTCACTCTTCCGCTT+GGG | 0.393834 | 1.1:+58759187 | MS.gene74848:CDS |
TTCTACATCGACCGGTGACT+GGG | 0.396030 | 1.1:+58768708 | MS.gene74848:CDS |
GCCATTGATTCTTGGGGCAT+GGG | 0.396534 | 1.1:+58761323 | MS.gene74848:CDS |
GGCCATTGATTCTTGGGGCA+TGG | 0.398121 | 1.1:+58761322 | MS.gene74848:CDS |
AAGGCATCTATCAACGTTAC+AGG | 0.399522 | 1.1:+58765840 | MS.gene74848:CDS |
ATTGTGAGTACAACAACATT+AGG | 0.400000 | 1.1:-58766573 | None:intergenic |
GCAAAGAGTTTAATTATTGT+TGG | 0.401711 | 1.1:-58764240 | None:intergenic |
TAGGGATGAATATTATGCTT+GGG | 0.402454 | 1.1:+58760484 | MS.gene74848:intron |
TGAGGTTCGCCTATGGTGTA+TGG | 0.408177 | 1.1:-58759173 | None:intergenic |
TGAAGAAACGACAAAATATT+CGG | 0.412071 | 1.1:-58759678 | None:intergenic |
TTTGTAGGTGTATCCGGAAC+TGG | 0.416956 | 1.1:+58759137 | MS.gene74848:CDS |
CTAATCTATGAGCTATTCTC+TGG | 0.420107 | 1.1:+58762739 | MS.gene74848:CDS |
TCAAGGGAAGAAGCTAATAA+AGG | 0.423515 | 1.1:-58764042 | None:intergenic |
CTTATTAGCTGGCAGATGTC+GGG | 0.427658 | 1.1:+58769563 | MS.gene74848:CDS |
CAGCTCCTGCACCCACTACA+AGG | 0.431470 | 1.1:+58769532 | MS.gene74848:CDS |
GTAGTGTTTGTTCTAATAGC+TGG | 0.431616 | 1.1:-58766158 | None:intergenic |
TTGAGCAAAACAGAGGAGTT+AGG | 0.433431 | 1.1:+58762769 | MS.gene74848:CDS |
TTTAACAATGCAGTCAAAGC+GGG | 0.442166 | 1.1:-58764084 | None:intergenic |
TGTGAAACAGGTTGAGAAAC+TGG | 0.443024 | 1.1:-58768856 | None:intergenic |
GTTACACCCCGGATGGTGTC+CGG | 0.443226 | 1.1:-58769629 | None:intergenic |
ATCAGCAGGTTTGCCCTTCA+GGG | 0.448123 | 1.1:-58767955 | None:intergenic |
GAGATCGTTGAGGCCAGTTC+CGG | 0.449992 | 1.1:-58759150 | None:intergenic |
GACACGCACAGCTCGATCAT+TGG | 0.450921 | 1.1:-58764265 | None:intergenic |
CTAGAACTCACAGAAGCAAC+TGG | 0.451326 | 1.1:-58767984 | None:intergenic |
TAGGTGCTCAGCGGATAATC+CGG | 0.458265 | 1.1:+58769610 | MS.gene74848:CDS |
GGCTACTGAGGGTGCAGGCA+TGG | 0.461778 | 1.1:+58767574 | MS.gene74848:CDS |
ATTGCAAGCTACTTAAAAGA+AGG | 0.463678 | 1.1:+58766197 | MS.gene74848:CDS |
GTAGGGATGAATATTATGCT+TGG | 0.463907 | 1.1:+58760483 | MS.gene74848:intron |
AATTTCAGTGATGTCATAGT+TGG | 0.467521 | 1.1:-58766535 | None:intergenic |
CGACATCTGCCAGCTAATAA+GGG | 0.468806 | 1.1:-58769561 | None:intergenic |
ATTAAGGAGTTAGGTCTTGA+AGG | 0.470304 | 1.1:+58759789 | MS.gene74848:CDS |
CTCCATATTGATCAATATGT+TGG | 0.471473 | 1.1:-58764296 | None:intergenic |
CAATAGAAGATGTTGGTGTA+AGG | 0.471614 | 1.1:-58768010 | None:intergenic |
GCATGGTGCTCACTGAAATC+TGG | 0.471654 | 1.1:-58768685 | None:intergenic |
AGGAGCTGCACTGGCAGCCC+GGG | 0.473190 | 1.1:-58769517 | None:intergenic |
AGGTTTGCCCTTCAGGGTAA+AGG | 0.474908 | 1.1:-58767949 | None:intergenic |
TCTGCCAGCTAATAAGGGTT+TGG | 0.475549 | 1.1:-58769556 | None:intergenic |
GATTCATGGTAATGTTTGCT+TGG | 0.482771 | 1.1:+58760647 | MS.gene74848:intron |
GCTTGAATGTTAGTAACAGC+TGG | 0.482855 | 1.1:-58768820 | None:intergenic |
TAAGGGTTTGGCCCTTGTAG+TGG | 0.484440 | 1.1:-58769544 | None:intergenic |
TAAGTAATAAATCACCTGTC+AGG | 0.485470 | 1.1:-58766600 | None:intergenic |
CAGCAGCTGAACCAAATTCA+AGG | 0.487704 | 1.1:-58764059 | None:intergenic |
GCGAACCTCACTCTTCCGCT+TGG | 0.492020 | 1.1:+58759186 | MS.gene74848:CDS |
TGGAGCTGGCAAAATCTGAC+TGG | 0.494202 | 1.1:+58761273 | MS.gene74848:CDS |
TCGTCAGATTGTGTTAAAGA+AGG | 0.495220 | 1.1:+58763925 | MS.gene74848:CDS |
GCAACTGGAGCATGATCAGC+AGG | 0.497875 | 1.1:-58767969 | None:intergenic |
AGTGGGTGCAGGAGCTGCAC+TGG | 0.497903 | 1.1:-58769526 | None:intergenic |
GACAAAGCAACATTATGAAA+AGG | 0.498443 | 1.1:+58766782 | MS.gene74848:CDS |
TTTCCACCTGCTAGAGTAGC+AGG | 0.498602 | 1.1:+58766380 | MS.gene74848:CDS |
ACCCATGCCCCAAGAATCAA+TGG | 0.501604 | 1.1:-58761324 | None:intergenic |
AGTGATGTCATAGTTGGAAC+TGG | 0.502858 | 1.1:-58766529 | None:intergenic |
ACAAACACTACTATCTTGCT+AGG | 0.504745 | 1.1:+58766170 | MS.gene74848:CDS |
ATTTGGAAGCTTGCGGAAGA+AGG | 0.507097 | 1.1:-58763885 | None:intergenic |
CCTTATTAGCTGGCAGATGT+CGG | 0.509391 | 1.1:+58769562 | MS.gene74848:CDS |
GAACTCCTCAGCTGAAAGCC+AGG | 0.510223 | 1.1:-58764115 | None:intergenic |
GTTGGCTTTGTCTCTTCAAG+TGG | 0.516613 | 1.1:-58768796 | None:intergenic |
GCTACTGAGGGTGCAGGCAT+GGG | 0.517132 | 1.1:+58767575 | MS.gene74848:CDS |
CTAATACCTGCTACTCTAGC+AGG | 0.517352 | 1.1:-58766386 | None:intergenic |
TTGCAAGCTACTTAAAAGAA+GGG | 0.519591 | 1.1:+58766198 | MS.gene74848:CDS |
GATGTATTTAATCTATGAGA+AGG | 0.519986 | 1.1:-58762973 | None:intergenic |
GGATAATCCGGACACCATCC+GGG | 0.522099 | 1.1:+58769622 | MS.gene74848:CDS |
GAGAAGTCTGACCTTGGGAA+TGG | 0.525202 | 1.1:-58762803 | None:intergenic |
ATTATCTGGAAGTAATGCTC+AGG | 0.525894 | 1.1:+58759342 | MS.gene74848:CDS |
AAGGGTTTGGCCCTTGTAGT+GGG | 0.526350 | 1.1:-58769543 | None:intergenic |
CTAGAGGCTACTGAGGGTGC+AGG | 0.527656 | 1.1:+58767569 | MS.gene74848:CDS |
TGGTTCCTGGCTTTCAGCTG+AGG | 0.528164 | 1.1:+58764110 | MS.gene74848:CDS |
TACTCACAATTGATCCTGAC+AGG | 0.528935 | 1.1:+58766586 | MS.gene74848:CDS |
ATGATTAAGAATACCTGAGC+TGG | 0.529994 | 1.1:-58768033 | None:intergenic |
GAACCTCACTCTTCCGCTTG+GGG | 0.532557 | 1.1:+58759188 | MS.gene74848:CDS |
CAGGATGGACATTTAGCTGC+GGG | 0.533267 | 1.1:+58759361 | MS.gene74848:CDS |
TTGTCACACAGACTTTAGAC+TGG | 0.533497 | 1.1:+58760679 | MS.gene74848:CDS |
CAGCAAATGCAAGTTTACTT+GGG | 0.535552 | 1.1:+58767612 | MS.gene74848:CDS |
CCATGGGCCATTGATTCTTG+GGG | 0.536282 | 1.1:+58761317 | MS.gene74848:CDS |
CACCATGCTTCTACATCGAC+CGG | 0.536882 | 1.1:+58768700 | MS.gene74848:CDS |
ACCATCAAAAGTTTCAATCT+CGG | 0.537115 | 1.1:-58759706 | None:intergenic |
ATTTCAGGACGATGGTTCAC+CGG | 0.538636 | 1.1:+58759306 | MS.gene74848:intron |
AGGGCCAAACCCTTATTAGC+TGG | 0.539562 | 1.1:+58769552 | MS.gene74848:CDS |
CATTTAGCTGCGGGTCGTAA+CGG | 0.539702 | 1.1:+58759370 | MS.gene74848:CDS |
ATGTTAGTAACAGCTGGAGT+TGG | 0.540275 | 1.1:-58768814 | None:intergenic |
CAACCTGTTTCACAGACAAA+CGG | 0.541648 | 1.1:+58768865 | MS.gene74848:CDS |
AGCTGAGGAGTTCCGTGTCA+AGG | 0.546667 | 1.1:+58764125 | MS.gene74848:CDS |
ACACAGATAGGTGCTGTTGA+AGG | 0.547369 | 1.1:-58768652 | None:intergenic |
CTCTGCTTCCAGATTACCAG+TGG | 0.549015 | 1.1:+58762935 | MS.gene74848:CDS |
CATGTTAGTTCTGGCTCCGA+AGG | 0.549605 | 1.1:+58764542 | MS.gene74848:CDS |
ATGAGTTCCTTTACCCTGAA+GGG | 0.549995 | 1.1:+58767942 | MS.gene74848:CDS |
GAGCCTGAAAACGACAAGGA+TGG | 0.549995 | 1.1:+58768757 | MS.gene74848:CDS |
CATGATTGCAGCTGTCTCAA+AGG | 0.550211 | 1.1:+58765797 | MS.gene74848:intron |
AGCCTGAAAACGACAAGGAT+GGG | 0.550821 | 1.1:+58768758 | MS.gene74848:CDS |
ATTGATTGTTGTTACCTTGG+AGG | 0.552023 | 1.1:-58759234 | None:intergenic |
TGCAACACAGTACCAATCAA+TGG | 0.553589 | 1.1:+58761253 | MS.gene74848:CDS |
GTCATTATTTAAGAAGCTCA+CGG | 0.554446 | 1.1:-58760528 | None:intergenic |
ACCAACATTTGCGTAGAGGA+TGG | 0.555932 | 1.1:-58760750 | None:intergenic |
TGCTACTCTAGCAGGTGGAA+AGG | 0.557308 | 1.1:-58766378 | None:intergenic |
TATGAGTTCCTTTACCCTGA+AGG | 0.558607 | 1.1:+58767941 | MS.gene74848:CDS |
TCATCATCGCGGCACCTCCA+AGG | 0.559670 | 1.1:+58759220 | MS.gene74848:CDS |
ACATCTTCTATTGCCAGCTC+AGG | 0.562271 | 1.1:+58768020 | MS.gene74848:CDS |
TTATTAAGAAGTCTCCTCCA+TGG | 0.565283 | 1.1:+58761300 | MS.gene74848:CDS |
ATTGATCAATATGTTGGAGA+AGG | 0.569945 | 1.1:-58764290 | None:intergenic |
GGAAGAGTGAGGTTCGCCTA+TGG | 0.570015 | 1.1:-58759180 | None:intergenic |
CTTCGGAGCCAGAACTAACA+TGG | 0.570370 | 1.1:-58764541 | None:intergenic |
TGGAATTATTTACCTTGACA+CGG | 0.575289 | 1.1:-58764137 | None:intergenic |
GAGGTTCGCCTATGGTGTAT+GGG | 0.576260 | 1.1:-58759172 | None:intergenic |
AATAGAAGATGTTGGTGTAA+GGG | 0.578476 | 1.1:-58768009 | None:intergenic |
ATTTAATCTATGAGAAGGCA+TGG | 0.578932 | 1.1:-58762968 | None:intergenic |
CTAACATTCAAGCAGATCAA+AGG | 0.580404 | 1.1:+58768830 | MS.gene74848:CDS |
GCCATCCTCTACGCAAATGT+TGG | 0.582787 | 1.1:+58760749 | MS.gene74848:CDS |
TCCTTAATCTTATCAGACAA+TGG | 0.583323 | 1.1:-58759774 | None:intergenic |
CAATTTGGTTACACCCCGGA+TGG | 0.583507 | 1.1:-58769636 | None:intergenic |
TCTACATCGACCGGTGACTG+GGG | 0.587475 | 1.1:+58768709 | MS.gene74848:CDS |
CCCCAAGAATCAATGGCCCA+TGG | 0.591835 | 1.1:-58761317 | None:intergenic |
TCACGTTAATTTCAGGACGA+TGG | 0.592141 | 1.1:+58759298 | MS.gene74848:intron |
AGGGATGAATATTATGCTTG+GGG | 0.600371 | 1.1:+58760485 | MS.gene74848:intron |
CTACATCGACCGGTGACTGG+GGG | 0.601175 | 1.1:+58768710 | MS.gene74848:CDS |
ACAGTACCAATCAATGGAGC+TGG | 0.601544 | 1.1:+58761259 | MS.gene74848:CDS |
CTGCTGAATTTGGAAGCTTG+CGG | 0.602423 | 1.1:-58763892 | None:intergenic |
GACAAATCTAGAGGCTACTG+AGG | 0.602695 | 1.1:+58767562 | MS.gene74848:intron |
TTATTAGCTGGCAGATGTCG+GGG | 0.603167 | 1.1:+58769564 | MS.gene74848:CDS |
GAGCCCCAAGCGGAAGAGTG+AGG | 0.604267 | 1.1:-58759191 | None:intergenic |
TGCAAGCTACTTAAAAGAAG+GGG | 0.604796 | 1.1:+58766199 | MS.gene74848:CDS |
TTTGAAAGATAGTGTCGAGA+AGG | 0.605218 | 1.1:+58763859 | MS.gene74848:CDS |
CTGATAAAACATCAAAAGCG+TGG | 0.606808 | 1.1:-58760707 | None:intergenic |
TCTGGAAGTAATGCTCAGGA+TGG | 0.608159 | 1.1:+58759346 | MS.gene74848:CDS |
TATTAAGAAGTCTCCTCCAT+GGG | 0.608185 | 1.1:+58761301 | MS.gene74848:CDS |
TTAACAATGCAGTCAAAGCG+GGG | 0.608186 | 1.1:-58764083 | None:intergenic |
AGCAGCTGAACCAAATTCAA+GGG | 0.613419 | 1.1:-58764058 | None:intergenic |
CTGAAAACGACAAGGATGGG+TGG | 0.616271 | 1.1:+58768761 | MS.gene74848:CDS |
TTTCCATTCAGCGATATGCA+TGG | 0.619441 | 1.1:+58761225 | MS.gene74848:intron |
GGTGTGGAATTTACACAGAT+AGG | 0.620542 | 1.1:-58768664 | None:intergenic |
GCATGGACTTCAGCAACCAC+TGG | 0.621047 | 1.1:-58762951 | None:intergenic |
TGAAAACGACAAGGATGGGT+GGG | 0.623050 | 1.1:+58768762 | MS.gene74848:CDS |
AATTACCAACATTTGCGTAG+AGG | 0.624880 | 1.1:-58760754 | None:intergenic |
AACTACACCAAAGTTGAGCA+AGG | 0.627445 | 1.1:+58769395 | MS.gene74848:CDS |
GTGCTCACTGAAATCTGGTG+TGG | 0.628815 | 1.1:-58768680 | None:intergenic |
GGAGCTGGCAAAATCTGACT+GGG | 0.629468 | 1.1:+58761274 | MS.gene74848:CDS |
GAGAAACCAGTAGCAACATG+AGG | 0.635595 | 1.1:-58764480 | None:intergenic |
CACCGGTCGATGTAGAAGCA+TGG | 0.636732 | 1.1:-58768702 | None:intergenic |
TTCTTTAACACAATCTGACG+AGG | 0.643601 | 1.1:-58763923 | None:intergenic |
ACGCACAGCTCGATCATTGG+AGG | 0.643851 | 1.1:-58764262 | None:intergenic |
TAGGTCTTGAAGGTGCGCAA+AGG | 0.647311 | 1.1:+58759799 | MS.gene74848:CDS |
AGCTCCTGCACCCACTACAA+GGG | 0.647903 | 1.1:+58769533 | MS.gene74848:CDS |
CGAGGAGCCTGAAAACGACA+AGG | 0.649330 | 1.1:+58768753 | MS.gene74848:CDS |
TCTCTTATAGACAAATCTAG+AGG | 0.654381 | 1.1:+58767553 | MS.gene74848:intron |
AACGATCTCCCATACACCAT+AGG | 0.655019 | 1.1:+58759164 | MS.gene74848:CDS |
CAACACTGCATCCATTCCCA+AGG | 0.656429 | 1.1:+58762792 | MS.gene74848:CDS |
TACATCGACCGGTGACTGGG+GGG | 0.656652 | 1.1:+58768711 | MS.gene74848:CDS |
GATAATCCGGACACCATCCG+GGG | 0.659235 | 1.1:+58769623 | MS.gene74848:CDS |
AGAAACCAGTAGCAACATGA+GGG | 0.659703 | 1.1:-58764479 | None:intergenic |
ACATCACTGAAATTGCCACT+AGG | 0.663088 | 1.1:+58766544 | MS.gene74848:CDS |
CTCCAAAATTAGGTGCTCAG+CGG | 0.663729 | 1.1:+58769601 | MS.gene74848:CDS |
GGCTCTTGGCTTCATCATCG+CGG | 0.665638 | 1.1:+58759209 | MS.gene74848:CDS |
ATACCTGCTACTCTAGCAGG+TGG | 0.672342 | 1.1:-58766383 | None:intergenic |
GATGTCATAGTTGGAACTGG+TGG | 0.673422 | 1.1:-58766526 | None:intergenic |
ACATTCAAGCAGATCAAAGG+CGG | 0.675162 | 1.1:+58768833 | MS.gene74848:CDS |
GTGGCAATTTGGTTACACCC+CGG | 0.676908 | 1.1:-58769640 | None:intergenic |
TCAGGATGGACATTTAGCTG+CGG | 0.676966 | 1.1:+58759360 | MS.gene74848:CDS |
TGGTGTATGGGAGATCGTTG+AGG | 0.677991 | 1.1:-58759160 | None:intergenic |
AACATTAGGAAGAATCCTAG+TGG | 0.678386 | 1.1:-58766559 | None:intergenic |
CCTTAATAATGACACAGACA+AGG | 0.679867 | 1.1:-58765821 | None:intergenic |
TAACAATGCAGTCAAAGCGG+GGG | 0.685519 | 1.1:-58764082 | None:intergenic |
TTTGAAGTTGAGCAAAACAG+AGG | 0.686400 | 1.1:+58762762 | MS.gene74848:CDS |
AGTCTGTGTGACAACAACAC+TGG | 0.687698 | 1.1:-58760670 | None:intergenic |
ACAAATCTAGAGGCTACTGA+GGG | 0.693320 | 1.1:+58767563 | MS.gene74848:CDS |
ACTAGAGAATGGAATTGACG+AGG | 0.706515 | 1.1:+58768735 | MS.gene74848:CDS |
GAGCTGGCAATAGAAGATGT+TGG | 0.718523 | 1.1:-58768017 | None:intergenic |
ATGAAGCCAAGAGCCCCAAG+CGG | 0.722990 | 1.1:-58759201 | None:intergenic |
CAAGAATCAATGGCCCATGG+AGG | 0.724818 | 1.1:-58761314 | None:intergenic |
TCAAAGCTTATAGAGAACAG+TGG | 0.726112 | 1.1:+58762994 | MS.gene74848:CDS |
GATGAAGATGATGATTTGTG+CGG | 0.742354 | 1.1:+58769417 | MS.gene74848:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 58759116 | 58769650 | 58759116 | ID=MS.gene74848 |
chr1.1 | mRNA | 58759116 | 58769650 | 58759116 | ID=MS.gene74848.t1;Parent=MS.gene74848 |
chr1.1 | exon | 58759116 | 58759241 | 58759116 | ID=MS.gene74848.t1.exon1;Parent=MS.gene74848.t1 |
chr1.1 | CDS | 58759116 | 58759241 | 58759116 | ID=cds.MS.gene74848.t1;Parent=MS.gene74848.t1 |
chr1.1 | exon | 58759313 | 58759411 | 58759313 | ID=MS.gene74848.t1.exon2;Parent=MS.gene74848.t1 |
chr1.1 | CDS | 58759313 | 58759411 | 58759313 | ID=cds.MS.gene74848.t1;Parent=MS.gene74848.t1 |
chr1.1 | exon | 58759669 | 58759820 | 58759669 | ID=MS.gene74848.t1.exon3;Parent=MS.gene74848.t1 |
chr1.1 | CDS | 58759669 | 58759820 | 58759669 | ID=cds.MS.gene74848.t1;Parent=MS.gene74848.t1 |
chr1.1 | exon | 58760487 | 58760559 | 58760487 | ID=MS.gene74848.t1.exon4;Parent=MS.gene74848.t1 |
chr1.1 | CDS | 58760487 | 58760559 | 58760487 | ID=cds.MS.gene74848.t1;Parent=MS.gene74848.t1 |
chr1.1 | exon | 58760648 | 58760770 | 58760648 | ID=MS.gene74848.t1.exon5;Parent=MS.gene74848.t1 |
chr1.1 | CDS | 58760648 | 58760770 | 58760648 | ID=cds.MS.gene74848.t1;Parent=MS.gene74848.t1 |
chr1.1 | exon | 58761236 | 58761344 | 58761236 | ID=MS.gene74848.t1.exon6;Parent=MS.gene74848.t1 |
chr1.1 | CDS | 58761236 | 58761344 | 58761236 | ID=cds.MS.gene74848.t1;Parent=MS.gene74848.t1 |
chr1.1 | exon | 58762734 | 58762813 | 58762734 | ID=MS.gene74848.t1.exon7;Parent=MS.gene74848.t1 |
chr1.1 | CDS | 58762734 | 58762813 | 58762734 | ID=cds.MS.gene74848.t1;Parent=MS.gene74848.t1 |
chr1.1 | exon | 58762934 | 58763015 | 58762934 | ID=MS.gene74848.t1.exon8;Parent=MS.gene74848.t1 |
chr1.1 | CDS | 58762934 | 58763015 | 58762934 | ID=cds.MS.gene74848.t1;Parent=MS.gene74848.t1 |
chr1.1 | exon | 58763807 | 58763946 | 58763807 | ID=MS.gene74848.t1.exon9;Parent=MS.gene74848.t1 |
chr1.1 | CDS | 58763807 | 58763946 | 58763807 | ID=cds.MS.gene74848.t1;Parent=MS.gene74848.t1 |
chr1.1 | exon | 58764036 | 58764146 | 58764036 | ID=MS.gene74848.t1.exon10;Parent=MS.gene74848.t1 |
chr1.1 | CDS | 58764036 | 58764146 | 58764036 | ID=cds.MS.gene74848.t1;Parent=MS.gene74848.t1 |
chr1.1 | exon | 58764234 | 58764350 | 58764234 | ID=MS.gene74848.t1.exon11;Parent=MS.gene74848.t1 |
chr1.1 | CDS | 58764234 | 58764350 | 58764234 | ID=cds.MS.gene74848.t1;Parent=MS.gene74848.t1 |
chr1.1 | exon | 58764474 | 58764563 | 58764474 | ID=MS.gene74848.t1.exon12;Parent=MS.gene74848.t1 |
chr1.1 | CDS | 58764474 | 58764563 | 58764474 | ID=cds.MS.gene74848.t1;Parent=MS.gene74848.t1 |
chr1.1 | exon | 58765808 | 58765861 | 58765808 | ID=MS.gene74848.t1.exon13;Parent=MS.gene74848.t1 |
chr1.1 | CDS | 58765808 | 58765861 | 58765808 | ID=cds.MS.gene74848.t1;Parent=MS.gene74848.t1 |
chr1.1 | exon | 58766146 | 58766220 | 58766146 | ID=MS.gene74848.t1.exon14;Parent=MS.gene74848.t1 |
chr1.1 | CDS | 58766146 | 58766220 | 58766146 | ID=cds.MS.gene74848.t1;Parent=MS.gene74848.t1 |
chr1.1 | exon | 58766326 | 58766401 | 58766326 | ID=MS.gene74848.t1.exon15;Parent=MS.gene74848.t1 |
chr1.1 | CDS | 58766326 | 58766401 | 58766326 | ID=cds.MS.gene74848.t1;Parent=MS.gene74848.t1 |
chr1.1 | exon | 58766508 | 58766607 | 58766508 | ID=MS.gene74848.t1.exon16;Parent=MS.gene74848.t1 |
chr1.1 | CDS | 58766508 | 58766607 | 58766508 | ID=cds.MS.gene74848.t1;Parent=MS.gene74848.t1 |
chr1.1 | exon | 58766734 | 58766803 | 58766734 | ID=MS.gene74848.t1.exon17;Parent=MS.gene74848.t1 |
chr1.1 | CDS | 58766734 | 58766803 | 58766734 | ID=cds.MS.gene74848.t1;Parent=MS.gene74848.t1 |
chr1.1 | exon | 58767563 | 58767633 | 58767563 | ID=MS.gene74848.t1.exon18;Parent=MS.gene74848.t1 |
chr1.1 | CDS | 58767563 | 58767633 | 58767563 | ID=cds.MS.gene74848.t1;Parent=MS.gene74848.t1 |
chr1.1 | exon | 58767935 | 58768041 | 58767935 | ID=MS.gene74848.t1.exon19;Parent=MS.gene74848.t1 |
chr1.1 | CDS | 58767935 | 58768041 | 58767935 | ID=cds.MS.gene74848.t1;Parent=MS.gene74848.t1 |
chr1.1 | exon | 58768641 | 58768886 | 58768641 | ID=MS.gene74848.t1.exon20;Parent=MS.gene74848.t1 |
chr1.1 | CDS | 58768641 | 58768886 | 58768641 | ID=cds.MS.gene74848.t1;Parent=MS.gene74848.t1 |
chr1.1 | exon | 58769376 | 58769650 | 58769376 | ID=MS.gene74848.t1.exon21;Parent=MS.gene74848.t1 |
chr1.1 | CDS | 58769376 | 58769650 | 58769376 | ID=cds.MS.gene74848.t1;Parent=MS.gene74848.t1 |
Gene Sequence |
Protein sequence |