Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75077.t1 | XP_003620925.1 | 90.4 | 303 | 29 | 0 | 1 | 303 | 1 | 303 | 3.60E-159 | 570.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75077.t1 | F4K933 | 43.3 | 298 | 154 | 6 | 1 | 288 | 15 | 307 | 4.0e-58 | 226.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75077.t1 | G7KJT8 | 90.4 | 303 | 29 | 0 | 1 | 303 | 1 | 303 | 2.6e-159 | 570.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene75077.t1 | TF | HRT |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75077.t1 | MTR_6g092520 | 90.429 | 303 | 29 | 0 | 1 | 303 | 1 | 303 | 0.0 | 574 |
| MS.gene75077.t1 | MTR_7g090060 | 74.074 | 297 | 76 | 1 | 2 | 297 | 6 | 302 | 2.75e-158 | 446 |
| MS.gene75077.t1 | MTR_6g092500 | 60.360 | 111 | 39 | 1 | 1 | 111 | 48 | 153 | 5.09e-38 | 132 |
| MS.gene75077.t1 | MTR_6g092480 | 45.833 | 120 | 50 | 2 | 121 | 226 | 9 | 127 | 3.04e-26 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75077.t1 | AT5G56780 | 43.289 | 298 | 154 | 6 | 1 | 288 | 15 | 307 | 4.84e-70 | 225 |
| MS.gene75077.t1 | AT5G56770 | 34.728 | 239 | 114 | 7 | 1 | 238 | 54 | 251 | 5.38e-33 | 122 |
Find 64 sgRNAs with CRISPR-Local
Find 109 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCAACATACTTGATTTAAT+TGG | 0.224850 | 6.3:+83926847 | None:intergenic |
| TAAAATTTGTGGAGTGAATT+TGG | 0.231337 | 6.3:-83926695 | MS.gene75077:CDS |
| ATCTGTGTTGACTAGCAGTT+TGG | 0.320195 | 6.3:-83927749 | MS.gene75077:CDS |
| CCATAACCTACCAGAAAATT+CGG | 0.327726 | 6.3:-83927797 | MS.gene75077:CDS |
| TGTACAGCCCTCCTTTCCTT+TGG | 0.332930 | 6.3:+83927831 | None:intergenic |
| TGGTAGAAATGAAGCTCATT+TGG | 0.337116 | 6.3:-83927632 | MS.gene75077:CDS |
| ATAATTCTAGCTTCGTTCAT+TGG | 0.343263 | 6.3:-83928540 | MS.gene75077:CDS |
| GTTGTATCTTGAACTATCTT+AGG | 0.344160 | 6.3:+83926742 | None:intergenic |
| AGTGAAGGGTAGAAGTGATT+TGG | 0.349328 | 6.3:+83926888 | None:intergenic |
| TTCTTATTGGTCCTTCTGAT+TGG | 0.353606 | 6.3:-83927864 | MS.gene75077:CDS |
| TCGGATTTGTTATCTTTCAT+AGG | 0.354876 | 6.3:+83926826 | None:intergenic |
| GAAACAATGACCGTCCCTTT+TGG | 0.364941 | 6.3:+83927578 | None:intergenic |
| TGAATTTGAACATGCGAGAT+AGG | 0.378945 | 6.3:+83926776 | None:intergenic |
| ATTTGAATCTTCTCACCAAA+AGG | 0.382515 | 6.3:-83927593 | MS.gene75077:CDS |
| GGTAGAAATGAAGCTCATTT+GGG | 0.398202 | 6.3:-83927631 | MS.gene75077:CDS |
| TTTCATGAGATCTTTCTTCA+AGG | 0.405599 | 6.3:-83927559 | MS.gene75077:CDS |
| CGAGTAGTTGTGGTTTATCT+AGG | 0.411149 | 6.3:-83927691 | MS.gene75077:CDS |
| TCTGTGTTGACTAGCAGTTT+GGG | 0.416124 | 6.3:-83927748 | MS.gene75077:CDS |
| AATGAAGCTCATTTGGGAAA+TGG | 0.430887 | 6.3:-83927625 | MS.gene75077:CDS |
| TCTTATTGGTCCTTCTGATT+GGG | 0.433564 | 6.3:-83927863 | MS.gene75077:CDS |
| TGTTTGCAAGGCATCTCCCT+TGG | 0.436980 | 6.3:+83927038 | None:intergenic |
| GAGAAGAGTGGTAAAATTTG+TGG | 0.450994 | 6.3:-83926706 | MS.gene75077:CDS |
| GCTGCCATTGTCTGCTTCAT+CGG | 0.453379 | 6.3:+83926807 | None:intergenic |
| GGAGCCCATCTATAAACAAT+TGG | 0.460709 | 6.3:+83927532 | None:intergenic |
| TAGGAAAAGCTGATAATGTA+AGG | 0.463358 | 6.3:-83927672 | MS.gene75077:CDS |
| GTTAGGTGTCATGAACATAA+AGG | 0.469142 | 6.3:-83926631 | MS.gene75077:CDS |
| AGGACAAGACTCCAATGTTA+TGG | 0.472021 | 6.3:-83927652 | MS.gene75077:CDS |
| TGAGTACATTTGATTATGCT+TGG | 0.472258 | 6.3:-83927002 | MS.gene75077:CDS |
| TTCTAGCTTCGTTCATTGGA+AGG | 0.483093 | 6.3:-83928536 | MS.gene75077:intron |
| CTTCATTTCTACCATAACAT+TGG | 0.487845 | 6.3:+83927641 | None:intergenic |
| GCTTGGAACACAATTAATAA+CGG | 0.491690 | 6.3:-83926985 | MS.gene75077:CDS |
| CTCGCATGTTCAAATTCAAC+CGG | 0.497027 | 6.3:-83926771 | MS.gene75077:CDS |
| ATCTGAAAATGTTCTTGTGC+CGG | 0.498102 | 6.3:+83926915 | None:intergenic |
| CAGTTGAGATTCTGTTTGCA+AGG | 0.499330 | 6.3:+83927026 | None:intergenic |
| CCTACCAGAAAATTCGGGTC+CGG | 0.500097 | 6.3:-83927791 | MS.gene75077:CDS |
| CCTTCACTCAAAAGAAAGTA+GGG | 0.503569 | 6.3:-83926873 | MS.gene75077:CDS |
| TTTGAATCTTCTCACCAAAA+GGG | 0.504759 | 6.3:-83927592 | MS.gene75077:CDS |
| ATGCTCAACAAAATATCTTC+CGG | 0.505608 | 6.3:-83926934 | MS.gene75077:CDS |
| CATAACCTACCAGAAAATTC+GGG | 0.505850 | 6.3:-83927796 | MS.gene75077:CDS |
| CCCTTCACTCAAAAGAAAGT+AGG | 0.510670 | 6.3:-83926874 | MS.gene75077:CDS |
| TTGACTAGCAGTTTGGGGCG+CGG | 0.514412 | 6.3:-83927742 | MS.gene75077:CDS |
| GAGCATTTCAAGAATATCAC+CGG | 0.525607 | 6.3:+83926951 | None:intergenic |
| CTACCAGAAAATTCGGGTCC+GGG | 0.529284 | 6.3:-83927790 | MS.gene75077:CDS |
| GATTGGGAAGATTATTCCAA+AGG | 0.533673 | 6.3:-83927847 | MS.gene75077:CDS |
| GGAAGATTATTCCAAAGGAA+AGG | 0.537391 | 6.3:-83927842 | MS.gene75077:CDS |
| GAACTATCTTAGGACGCGAC+CGG | 0.567906 | 6.3:+83926752 | None:intergenic |
| GAATAATCTTCCCAATCAGA+AGG | 0.571601 | 6.3:+83927853 | None:intergenic |
| AATAACGGTCCACGGCGTCC+CGG | 0.572061 | 6.3:-83926970 | MS.gene75077:CDS |
| CACAACTACTCGACACGAGT+CGG | 0.572516 | 6.3:+83927702 | None:intergenic |
| CGACTCGTGTCGAGTAGTTG+TGG | 0.573045 | 6.3:-83927701 | MS.gene75077:CDS |
| CTGTGTTGACTAGCAGTTTG+GGG | 0.603432 | 6.3:-83927747 | MS.gene75077:CDS |
| ACTCCGAGTTCATAGACTCC+CGG | 0.608999 | 6.3:+83927772 | None:intergenic |
| AGATTATTCCAAAGGAAAGG+AGG | 0.610993 | 6.3:-83927839 | MS.gene75077:CDS |
| AATCTTCTCACCAAAAGGGA+CGG | 0.621847 | 6.3:-83927588 | MS.gene75077:CDS |
| TTCTATTTGTACAAAGACGC+CGG | 0.623541 | 6.3:-83926665 | MS.gene75077:CDS |
| GGTCCGGGAGTCTATGAACT+CGG | 0.623764 | 6.3:-83927775 | MS.gene75077:CDS |
| AGAATATCACCGGGACGCCG+TGG | 0.625598 | 6.3:+83926961 | None:intergenic |
| GATTATTCCAAAGGAAAGGA+GGG | 0.633478 | 6.3:-83927838 | MS.gene75077:CDS |
| GTTGAACAGATGCAAACCAA+GGG | 0.638402 | 6.3:-83927054 | MS.gene75077:intron |
| ACACAATTAATAACGGTCCA+CGG | 0.642408 | 6.3:-83926978 | MS.gene75077:CDS |
| TGTTGAACAGATGCAAACCA+AGG | 0.647561 | 6.3:-83927055 | MS.gene75077:intron |
| AACTACTCGACACGAGTCGG+TGG | 0.649363 | 6.3:+83927705 | None:intergenic |
| AGCATTTCAAGAATATCACC+GGG | 0.651967 | 6.3:+83926952 | None:intergenic |
| AAATCCGATGAAGCAGACAA+TGG | 0.675612 | 6.3:-83926811 | MS.gene75077:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAAATTAATAGATTAG+AGG | + | chr6.3:83926654-83926673 | None:intergenic | 10.0% |
| !! | CAAAATAAACATATACAATA+TGG | + | chr6.3:83927753-83927772 | None:intergenic | 15.0% |
| !! | CTGAAAAATATTGAATTAAA+TGG | - | chr6.3:83926956-83926975 | MS.gene75077:CDS | 15.0% |
| !!! | GCATTTATATTTAATCTTTT+GGG | + | chr6.3:83928010-83928029 | None:intergenic | 15.0% |
| !!! | TGCATTTATATTTAATCTTT+TGG | + | chr6.3:83928011-83928030 | None:intergenic | 15.0% |
| !! | AAAAATCAACTTATAGTTGT+TGG | + | chr6.3:83926886-83926905 | None:intergenic | 20.0% |
| !! | AAAATCAACTTATAGTTGTT+GGG | + | chr6.3:83926885-83926904 | None:intergenic | 20.0% |
| !! | ATAATATGTATCTCAAATCA+TGG | + | chr6.3:83927782-83927801 | None:intergenic | 20.0% |
| !! | TTAATTAAGAGCTAAGTTAT+AGG | - | chr6.3:83927832-83927851 | MS.gene75077:CDS | 20.0% |
| !!! | GGTTTTTAGATCTAAAAATA+CGG | - | chr6.3:83927069-83927088 | MS.gene75077:intron | 20.0% |
| !!! | TATTGTTTTCAGATTCTTAT+TGG | - | chr6.3:83927270-83927289 | MS.gene75077:intron | 20.0% |
| !!! | TGTTAATGCTTAACATTTTT+AGG | - | chr6.3:83926715-83926734 | MS.gene75077:CDS | 20.0% |
| !!! | TTTCACTGTAGATTTTTATT+TGG | - | chr6.3:83927048-83927067 | MS.gene75077:CDS | 20.0% |
| !!! | TTTCAGCTAAGTAATATTTT+GGG | - | chr6.3:83926817-83926836 | MS.gene75077:CDS | 20.0% |
| !!! | TTTTCCAATTGTTTATAGAT+GGG | - | chr6.3:83927611-83927630 | MS.gene75077:CDS | 20.0% |
| ! | AAACATATACAATATGGTCA+AGG | + | chr6.3:83927747-83927766 | None:intergenic | 25.0% |
| ! | TAAAATTTGTGGAGTGAATT+TGG | - | chr6.3:83928452-83928471 | MS.gene75077:intron | 25.0% |
| ! | TCAACTTATTAAGATCAAGA+TGG | - | chr6.3:83927673-83927692 | MS.gene75077:CDS | 25.0% |
| ! | TGTGAAGAATGTAAAATTGT+CGG | + | chr6.3:83926993-83927012 | None:intergenic | 25.0% |
| !! | ACAATTTTACATTCTTCACA+AGG | - | chr6.3:83926993-83927012 | MS.gene75077:CDS | 25.0% |
| !! | GTTTCAGCTAAGTAATATTT+TGG | - | chr6.3:83926816-83926835 | MS.gene75077:CDS | 25.0% |
| !! | GTTTTCCAATTGTTTATAGA+TGG | - | chr6.3:83927610-83927629 | MS.gene75077:CDS | 25.0% |
| !! | TATGAAGTAAGTATTTTCTC+TGG | - | chr6.3:83927887-83927906 | MS.gene75077:intron | 25.0% |
| !! | TTCAGCTAAGTAATATTTTG+GGG | - | chr6.3:83926818-83926837 | MS.gene75077:CDS | 25.0% |
| AATGCATAGAATGTACTTAC+AGG | + | chr6.3:83927639-83927658 | None:intergenic | 30.0% | |
| ATGCTCAACAAAATATCTTC+CGG | - | chr6.3:83928213-83928232 | MS.gene75077:intron | 30.0% | |
| ATTTGAATCTTCTCACCAAA+AGG | - | chr6.3:83927554-83927573 | MS.gene75077:CDS | 30.0% | |
| CACATTTGCATCTTACATAA+AGG | - | chr6.3:83928029-83928048 | MS.gene75077:intron | 30.0% | |
| CATGCATGTATGTATGTATT+CGG | + | chr6.3:83927154-83927173 | None:intergenic | 30.0% | |
| CTTCATTTCTACCATAACAT+TGG | + | chr6.3:83927509-83927528 | None:intergenic | 30.0% | |
| GCTTGGAACACAATTAATAA+CGG | - | chr6.3:83928162-83928181 | MS.gene75077:intron | 30.0% | |
| GGCAACATACTTGATTTAAT+TGG | + | chr6.3:83928303-83928322 | None:intergenic | 30.0% | |
| GTTGTATCTTGAACTATCTT+AGG | + | chr6.3:83928408-83928427 | None:intergenic | 30.0% | |
| TAAGAGCTAAGTTATAGGTT+TGG | - | chr6.3:83927837-83927856 | MS.gene75077:CDS | 30.0% | |
| TGAGTACATTTGATTATGCT+TGG | - | chr6.3:83928145-83928164 | MS.gene75077:intron | 30.0% | |
| TTTCATGAGATCTTTCTTCA+AGG | - | chr6.3:83927588-83927607 | MS.gene75077:CDS | 30.0% | |
| TTTGAATCTTCTCACCAAAA+GGG | - | chr6.3:83927555-83927574 | MS.gene75077:CDS | 30.0% | |
| ! | AATTTTACCACTCTTCTCAA+CGG | + | chr6.3:83928439-83928458 | None:intergenic | 30.0% |
| ! | TAGGAAAAGCTGATAATGTA+AGG | - | chr6.3:83927475-83927494 | MS.gene75077:intron | 30.0% |
| !! | ATAATTCTAGCTTCGTTCAT+TGG | - | chr6.3:83926607-83926626 | MS.gene75077:CDS | 30.0% |
| !! | TCGGATTTGTTATCTTTCAT+AGG | + | chr6.3:83928324-83928343 | None:intergenic | 30.0% |
| AATGAAGCTCATTTGGGAAA+TGG | - | chr6.3:83927522-83927541 | MS.gene75077:intron | 35.0% | |
| ACACAATTAATAACGGTCCA+CGG | - | chr6.3:83928169-83928188 | MS.gene75077:intron | 35.0% | |
| AGATTATTCCAAAGGAAAGG+AGG | - | chr6.3:83927308-83927327 | MS.gene75077:intron | 35.0% | |
| AGCATTTCAAGAATATCACC+GGG | + | chr6.3:83928198-83928217 | None:intergenic | 35.0% | |
| AGTTATAGGTTTGGAAGTCT+AGG | - | chr6.3:83927846-83927865 | MS.gene75077:CDS | 35.0% | |
| ATACAATATGGTCAAGGCAA+TGG | + | chr6.3:83927741-83927760 | None:intergenic | 35.0% | |
| ATCTGAAAATGTTCTTGTGC+CGG | + | chr6.3:83928235-83928254 | None:intergenic | 35.0% | |
| CAAAAAGAGGAAATGCTTGT+CGG | - | chr6.3:83928568-83928587 | MS.gene75077:CDS | 35.0% | |
| CATAACCTACCAGAAAATTC+GGG | - | chr6.3:83927351-83927370 | MS.gene75077:intron | 35.0% | |
| CCATAACCTACCAGAAAATT+CGG | - | chr6.3:83927350-83927369 | MS.gene75077:intron | 35.0% | |
| CCTTCACTCAAAAGAAAGTA+GGG | - | chr6.3:83928274-83928293 | MS.gene75077:intron | 35.0% | |
| GAATAATCTTCCCAATCAGA+AGG | + | chr6.3:83927297-83927316 | None:intergenic | 35.0% | |
| GAGAAGAGTGGTAAAATTTG+TGG | - | chr6.3:83928441-83928460 | MS.gene75077:intron | 35.0% | |
| GAGCATTTCAAGAATATCAC+CGG | + | chr6.3:83928199-83928218 | None:intergenic | 35.0% | |
| GATTATTCCAAAGGAAAGGA+GGG | - | chr6.3:83927309-83927328 | MS.gene75077:intron | 35.0% | |
| GATTGGGAAGATTATTCCAA+AGG | - | chr6.3:83927300-83927319 | MS.gene75077:intron | 35.0% | |
| GGAAGATTATTCCAAAGGAA+AGG | - | chr6.3:83927305-83927324 | MS.gene75077:intron | 35.0% | |
| GGTAGAAATGAAGCTCATTT+GGG | - | chr6.3:83927516-83927535 | MS.gene75077:intron | 35.0% | |
| TCCAAGTCAGAATCAAAAAG+AGG | - | chr6.3:83928555-83928574 | MS.gene75077:CDS | 35.0% | |
| TCTTATTGGTCCTTCTGATT+GGG | - | chr6.3:83927284-83927303 | MS.gene75077:intron | 35.0% | |
| TGAATTTGAACATGCGAGAT+AGG | + | chr6.3:83928374-83928393 | None:intergenic | 35.0% | |
| TGGTAGAAATGAAGCTCATT+TGG | - | chr6.3:83927515-83927534 | MS.gene75077:intron | 35.0% | |
| TTCTATTTGTACAAAGACGC+CGG | - | chr6.3:83928482-83928501 | MS.gene75077:intron | 35.0% | |
| TTCTTATTGGTCCTTCTGAT+TGG | - | chr6.3:83927283-83927302 | MS.gene75077:intron | 35.0% | |
| ! | GTTAGGTGTCATGAACATAA+AGG | - | chr6.3:83928516-83928535 | MS.gene75077:intron | 35.0% |
| !! | CCTACTTTCTTTTGAGTGAA+GGG | + | chr6.3:83928276-83928295 | None:intergenic | 35.0% |
| !! | CGAATTTTCTGGTAGGTTAT+GGG | + | chr6.3:83927352-83927371 | None:intergenic | 35.0% |
| !! | TCCTCTTTTTGATTCTGACT+TGG | + | chr6.3:83928559-83928578 | None:intergenic | 35.0% |
| AAATCCGATGAAGCAGACAA+TGG | - | chr6.3:83928336-83928355 | MS.gene75077:intron | 40.0% | |
| AATCTTCTCACCAAAAGGGA+CGG | - | chr6.3:83927559-83927578 | MS.gene75077:CDS | 40.0% | |
| AGGACAAGACTCCAATGTTA+TGG | - | chr6.3:83927495-83927514 | MS.gene75077:intron | 40.0% | |
| AGTGAAGGGTAGAAGTGATT+TGG | + | chr6.3:83928262-83928281 | None:intergenic | 40.0% | |
| CAGTTGAGATTCTGTTTGCA+AGG | + | chr6.3:83928124-83928143 | None:intergenic | 40.0% | |
| CCCTTCACTCAAAAGAAAGT+AGG | - | chr6.3:83928273-83928292 | MS.gene75077:intron | 40.0% | |
| CGAGTAGTTGTGGTTTATCT+AGG | - | chr6.3:83927456-83927475 | MS.gene75077:intron | 40.0% | |
| CTCGCATGTTCAAATTCAAC+CGG | - | chr6.3:83928376-83928395 | MS.gene75077:intron | 40.0% | |
| GGAGCCCATCTATAAACAAT+TGG | + | chr6.3:83927618-83927637 | None:intergenic | 40.0% | |
| GTTGAACAGATGCAAACCAA+GGG | - | chr6.3:83928093-83928112 | MS.gene75077:intron | 40.0% | |
| TCACAAGGTCAAGACATCAT+TGG | - | chr6.3:83927008-83927027 | MS.gene75077:CDS | 40.0% | |
| TGTTGAACAGATGCAAACCA+AGG | - | chr6.3:83928092-83928111 | MS.gene75077:intron | 40.0% | |
| ! | GATTTTTCCGTTGAGAAGAG+TGG | - | chr6.3:83928429-83928448 | MS.gene75077:intron | 40.0% |
| !! | ATCTGTGTTGACTAGCAGTT+TGG | - | chr6.3:83927398-83927417 | MS.gene75077:intron | 40.0% |
| !! | CCCTACTTTCTTTTGAGTGA+AGG | + | chr6.3:83928277-83928296 | None:intergenic | 40.0% |
| !! | CCGAATTTTCTGGTAGGTTA+TGG | + | chr6.3:83927353-83927372 | None:intergenic | 40.0% |
| !! | TCTGTGTTGACTAGCAGTTT+GGG | - | chr6.3:83927399-83927418 | MS.gene75077:intron | 40.0% |
| !! | TTCTAGCTTCGTTCATTGGA+AGG | - | chr6.3:83926611-83926630 | MS.gene75077:CDS | 40.0% |
| !!! | CACCTAACTCTTTTTTCGAC+CGG | + | chr6.3:83928504-83928523 | None:intergenic | 40.0% |
| TTGATTGCGTGTGATTGCGT+GGG | - | chr6.3:83927109-83927128 | MS.gene75077:intron | 45.0% | |
| ! | GAAACAATGACCGTCCCTTT+TGG | + | chr6.3:83927572-83927591 | None:intergenic | 45.0% |
| !! | CTGTGTTGACTAGCAGTTTG+GGG | - | chr6.3:83927400-83927419 | MS.gene75077:intron | 45.0% |
| ACTCCGAGTTCATAGACTCC+CGG | + | chr6.3:83927378-83927397 | None:intergenic | 50.0% | |
| CACAACTACTCGACACGAGT+CGG | + | chr6.3:83927448-83927467 | None:intergenic | 50.0% | |
| CCTACCAGAAAATTCGGGTC+CGG | - | chr6.3:83927356-83927375 | MS.gene75077:intron | 50.0% | |
| CGCCGGTCGAAAAAAGAGTT+AGG | - | chr6.3:83928499-83928518 | MS.gene75077:intron | 50.0% | |
| CTACCAGAAAATTCGGGTCC+GGG | - | chr6.3:83927357-83927376 | MS.gene75077:intron | 50.0% | |
| GAACTATCTTAGGACGCGAC+CGG | + | chr6.3:83928398-83928417 | None:intergenic | 50.0% | |
| GCTGCCATTGTCTGCTTCAT+CGG | + | chr6.3:83928343-83928362 | None:intergenic | 50.0% | |
| GTTGATTGCGTGTGATTGCG+TGG | - | chr6.3:83927108-83927127 | MS.gene75077:intron | 50.0% | |
| TGTACAGCCCTCCTTTCCTT+TGG | + | chr6.3:83927319-83927338 | None:intergenic | 50.0% | |
| ! | TGTTTGCAAGGCATCTCCCT+TGG | + | chr6.3:83928112-83928131 | None:intergenic | 50.0% |
| AACTACTCGACACGAGTCGG+TGG | + | chr6.3:83927445-83927464 | None:intergenic | 55.0% | |
| CGACTCGTGTCGAGTAGTTG+TGG | - | chr6.3:83927446-83927465 | MS.gene75077:intron | 55.0% | |
| GGTCCGGGAGTCTATGAACT+CGG | - | chr6.3:83927372-83927391 | MS.gene75077:intron | 55.0% | |
| ! | ACTCCCGGACCCGAATTTTC+TGG | + | chr6.3:83927363-83927382 | None:intergenic | 55.0% |
| ! | TTGACTAGCAGTTTGGGGCG+CGG | - | chr6.3:83927405-83927424 | MS.gene75077:intron | 55.0% |
| !! | CCGGACCCGAATTTTCTGGT+AGG | + | chr6.3:83927359-83927378 | None:intergenic | 55.0% |
| AATAACGGTCCACGGCGTCC+CGG | - | chr6.3:83928177-83928196 | MS.gene75077:intron | 60.0% | |
| AGAATATCACCGGGACGCCG+TGG | + | chr6.3:83928189-83928208 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 83926573 | 83928596 | 83926573 | ID=MS.gene75077 |
| chr6.3 | mRNA | 83926573 | 83928596 | 83926573 | ID=MS.gene75077.t1;Parent=MS.gene75077 |
| chr6.3 | exon | 83928537 | 83928596 | 83928537 | ID=MS.gene75077.t1.exon1;Parent=MS.gene75077.t1 |
| chr6.3 | CDS | 83928537 | 83928596 | 83928537 | ID=cds.MS.gene75077.t1;Parent=MS.gene75077.t1 |
| chr6.3 | exon | 83927531 | 83927887 | 83927531 | ID=MS.gene75077.t1.exon2;Parent=MS.gene75077.t1 |
| chr6.3 | CDS | 83927531 | 83927887 | 83927531 | ID=cds.MS.gene75077.t1;Parent=MS.gene75077.t1 |
| chr6.3 | exon | 83926573 | 83927067 | 83926573 | ID=MS.gene75077.t1.exon3;Parent=MS.gene75077.t1 |
| chr6.3 | CDS | 83926573 | 83927067 | 83926573 | ID=cds.MS.gene75077.t1;Parent=MS.gene75077.t1 |
| Gene Sequence |
| Protein sequence |
