AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene75411

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75411.t1 MTR_5g049190 95.455 242 11 0 1 242 1 242 8.80e-173 475
MS.gene75411.t1 MTR_3g077650 57.292 288 72 8 1 242 148 430 2.40e-105 312
MS.gene75411.t1 MTR_4g105660 51.971 279 84 8 2 236 148 420 5.57e-82 251
MS.gene75411.t1 MTR_3g463400 48.325 209 80 4 17 204 131 332 4.49e-55 183
MS.gene75411.t1 MTR_7g037260 44.298 228 111 5 16 240 142 356 6.15e-55 180
MS.gene75411.t1 MTR_5g070020 44.878 205 99 2 17 216 120 315 1.40e-54 179
MS.gene75411.t1 MTR_4g088015 60.140 143 54 1 16 155 218 360 1.95e-53 178
MS.gene75411.t1 MTR_7g451170 64.516 124 41 1 16 136 188 311 2.92e-50 169
MS.gene75411.t1 MTR_7g037130 42.291 227 115 5 16 239 142 355 2.73e-47 160
MS.gene75411.t1 MTR_1g057980 53.521 142 59 2 16 150 77 218 5.77e-43 147
MS.gene75411.t1 MTR_7g450950 53.237 139 60 1 15 148 153 291 6.68e-43 148
MS.gene75411.t1 MTR_7g035350 53.906 128 55 1 16 139 222 349 3.06e-42 149
MS.gene75411.t1 MTR_7g061330 61.165 103 40 0 17 119 111 213 5.88e-39 142
MS.gene75411.t1 MTR_7g461410 61.165 103 40 0 17 119 111 213 5.88e-39 142
MS.gene75411.t1 MTR_7g061330 61.165 103 40 0 17 119 75 177 1.18e-38 140
MS.gene75411.t1 MTR_1g026870 56.311 103 45 0 17 119 83 185 1.11e-37 140
MS.gene75411.t1 MTR_3g110028 53.922 102 47 0 17 118 83 184 5.78e-37 138
MS.gene75411.t1 MTR_4g019370 52.475 101 48 0 18 118 37 137 3.03e-33 123
MS.gene75411.t1 MTR_5g010650 56.701 97 42 0 16 112 107 203 3.07e-33 125
MS.gene75411.t1 MTR_4g094982 49.038 104 53 0 18 121 4 107 4.22e-33 121
MS.gene75411.t1 MTR_3g101290 47.170 106 56 0 13 118 31 136 6.53e-32 117
MS.gene75411.t1 MTR_5g016510 47.115 104 55 0 18 121 4 107 2.18e-31 117
MS.gene75411.t1 MTR_1g112760 34.518 197 119 4 14 208 10 198 3.87e-30 112
MS.gene75411.t1 MTR_0008s0390 47.664 107 53 2 14 118 10 115 3.75e-29 110
MS.gene75411.t1 MTR_7g115650 45.000 120 57 2 4 122 7 118 7.36e-29 108
MS.gene75411.t1 MTR_4g082040 49.515 103 52 0 18 120 104 206 9.77e-29 112
MS.gene75411.t1 MTR_5g041570 49.057 106 54 0 15 120 130 235 1.00e-28 112
MS.gene75411.t1 MTR_2g089450 47.368 114 57 2 13 124 8 120 1.08e-28 109
MS.gene75411.t1 MTR_5g082910 46.939 98 52 0 18 115 18 115 1.51e-28 109
MS.gene75411.t1 MTR_6g027340 33.173 208 117 5 9 202 1 200 1.66e-28 107
MS.gene75411.t1 MTR_3g052450 47.222 108 55 2 14 119 37 144 1.71e-28 112
MS.gene75411.t1 MTR_5g079670 45.946 111 59 1 13 122 7 117 1.91e-28 107
MS.gene75411.t1 MTR_0251s0050 46.903 113 55 3 14 122 10 121 2.08e-28 108
MS.gene75411.t1 MTR_0008s0470 46.226 106 54 2 15 118 11 115 3.69e-28 108
MS.gene75411.t1 MTR_1g043050 34.177 237 122 8 14 241 9 220 4.20e-28 107
MS.gene75411.t1 MTR_7g096930 31.092 238 139 6 4 227 7 233 4.73e-28 108
MS.gene75411.t1 MTR_6g015455 43.269 104 59 0 18 121 4 107 5.09e-28 112
MS.gene75411.t1 MTR_6g074860 30.769 234 146 5 19 241 4 232 5.41e-28 107
MS.gene75411.t1 MTR_3g052430 49.074 108 51 3 15 119 39 145 5.86e-28 111
MS.gene75411.t1 MTR_4g478180 51.485 101 46 2 14 112 10 109 6.65e-28 109
MS.gene75411.t1 MTR_5g078140 47.107 121 53 3 4 122 7 118 7.68e-28 108
MS.gene75411.t1 MTR_2g089420 46.226 106 54 2 19 122 13 117 9.23e-28 110
MS.gene75411.t1 MTR_2g089620 49.057 106 53 1 14 118 9 114 1.05e-27 108
MS.gene75411.t1 MTR_3g089045 52.336 107 48 1 19 122 16 122 1.16e-27 107
MS.gene75411.t1 MTR_6g009430 43.636 110 61 1 14 122 9 118 1.29e-27 108
MS.gene75411.t1 MTR_8g017440 31.282 195 121 5 13 196 8 200 1.52e-27 108
MS.gene75411.t1 MTR_6g027360 45.045 111 59 1 8 118 69 177 2.02e-27 107
MS.gene75411.t1 MTR_4g073420 38.690 168 99 3 14 178 9 175 2.37e-27 106
MS.gene75411.t1 MTR_3g077110 43.750 112 60 2 14 123 9 119 2.99e-27 107
MS.gene75411.t1 MTR_3g065440 44.118 136 64 4 4 136 7 133 3.25e-27 106
MS.gene75411.t1 MTR_3g461490 34.783 184 90 4 14 196 9 163 3.49e-27 107
MS.gene75411.t1 MTR_5g029840 45.794 107 57 1 17 122 12 118 4.33e-27 106
MS.gene75411.t1 MTR_4g029540 47.321 112 55 3 17 126 10 119 6.42e-27 105
MS.gene75411.t1 MTR_6g006030 42.017 119 66 2 17 133 14 131 7.86e-27 103
MS.gene75411.t1 MTR_8g042410 38.509 161 89 6 19 170 39 198 1.13e-26 107
MS.gene75411.t1 MTR_1g045610 51.042 96 44 2 19 112 23 117 1.35e-26 103
MS.gene75411.t1 MTR_2g099740 44.954 109 57 2 13 119 8 115 1.45e-26 106
MS.gene75411.t1 MTR_5g007370 47.573 103 51 2 12 112 7 108 1.53e-26 104
MS.gene75411.t1 MTR_4g065017 44.737 114 61 2 7 118 6 119 1.65e-26 105
MS.gene75411.t1 MTR_6g027370 46.667 105 53 1 18 119 98 202 1.69e-26 105
MS.gene75411.t1 MTR_1g110460 27.799 259 149 6 17 237 26 284 1.78e-26 104
MS.gene75411.t1 MTR_1g043080 47.573 103 51 2 14 114 9 110 1.99e-26 103
MS.gene75411.t1 MTR_1g076150 45.133 113 51 3 4 114 7 110 2.11e-26 103
MS.gene75411.t1 MTR_3g028740 47.664 107 55 1 13 118 18 124 2.19e-26 105
MS.gene75411.t1 MTR_4g105130 33.673 196 121 5 14 206 9 198 2.23e-26 105
MS.gene75411.t1 MTR_2g097910 47.525 101 52 1 19 118 22 122 2.26e-26 104
MS.gene75411.t1 MTR_5g010020 45.545 101 54 1 13 112 8 108 2.33e-26 104
MS.gene75411.t1 MTR_7g076740 41.912 136 59 4 13 145 8 126 2.37e-26 104
MS.gene75411.t1 MTR_2g011660 48.515 101 51 1 19 118 15 115 2.37e-26 105
MS.gene75411.t1 MTR_3g074520 50.000 102 48 2 13 112 8 108 2.38e-26 105
MS.gene75411.t1 MTR_4g102380 46.429 112 57 2 13 122 8 118 2.57e-26 103
MS.gene75411.t1 MTR_8g031360 48.544 103 51 1 12 112 8 110 2.72e-26 103
MS.gene75411.t1 MTR_7g017260 30.350 257 150 8 5 239 13 262 2.84e-26 103
MS.gene75411.t1 MTR_8g095390 43.966 116 63 2 14 127 9 124 3.58e-26 103
MS.gene75411.t1 MTR_7g035075 45.918 98 52 1 16 112 13 110 3.63e-26 101
MS.gene75411.t1 MTR_3g011610 44.737 114 59 3 8 118 28 140 4.46e-26 106
MS.gene75411.t1 MTR_8g017540 40.909 132 74 3 13 141 54 184 4.49e-26 105
MS.gene75411.t1 MTR_3g097450 47.414 116 57 3 14 126 9 123 5.34e-26 103
MS.gene75411.t1 MTR_1g073170 50.000 96 45 2 19 112 22 116 5.96e-26 102
MS.gene75411.t1 MTR_1g085040 47.525 101 50 2 14 112 9 108 7.67e-26 103
MS.gene75411.t1 MTR_7g110830 35.329 167 103 3 14 178 9 172 7.79e-26 103
MS.gene75411.t1 MTR_8g006470 43.636 110 60 2 11 118 4 113 9.34e-26 102
MS.gene75411.t1 MTR_8g017500 43.443 122 65 3 13 131 8 128 9.38e-26 103
MS.gene75411.t1 MTR_1g062940 49.000 100 48 2 15 112 4 102 9.58e-26 100
MS.gene75411.t1 MTR_4g485530 40.984 122 71 1 19 139 14 135 9.92e-26 100
MS.gene75411.t1 MTR_7g111290 48.515 101 49 2 14 112 9 108 1.63e-25 103
MS.gene75411.t1 MTR_4g091490 47.525 101 52 1 19 118 15 115 2.13e-25 102
MS.gene75411.t1 MTR_7g011170 38.854 157 79 5 4 151 7 155 2.26e-25 101
MS.gene75411.t1 MTR_4g100720 47.000 100 52 1 14 112 10 109 2.41e-25 98.6
MS.gene75411.t1 MTR_5g079290 31.250 192 124 3 9 196 13 200 2.84e-25 100
MS.gene75411.t1 MTR_5g079220 40.833 120 70 1 5 123 9 128 3.41e-25 100
MS.gene75411.t1 MTR_7g086960 40.000 150 83 2 19 162 89 237 3.60e-25 102
MS.gene75411.t1 MTR_0001s0360 33.129 163 108 1 17 178 7 169 3.61e-25 100
MS.gene75411.t1 MTR_2g064160 42.623 122 66 3 14 132 8 128 4.35e-25 100
MS.gene75411.t1 MTR_4g063100 44.444 108 57 2 19 124 9 115 4.55e-25 99.8
MS.gene75411.t1 MTR_1g085640 46.000 100 53 1 14 112 9 108 4.67e-25 102
MS.gene75411.t1 MTR_6g055910 42.975 121 68 1 14 133 11 131 6.25e-25 100
MS.gene75411.t1 MTR_8g027345 44.545 110 52 2 4 112 7 108 7.63e-25 100
MS.gene75411.t1 MTR_5g062790 44.737 114 57 3 9 118 1 112 8.15e-25 100
MS.gene75411.t1 MTR_2g034790 43.966 116 56 2 4 118 7 114 8.65e-25 100
MS.gene75411.t1 MTR_8g098860 43.564 101 56 1 13 112 8 108 9.27e-25 100
MS.gene75411.t1 MTR_0063s0090 43.269 104 56 2 13 114 8 110 9.37e-25 98.2
MS.gene75411.t1 MTR_4g121460 41.379 116 59 2 4 118 7 114 9.95e-25 100
MS.gene75411.t1 MTR_1g100653 43.220 118 61 4 14 126 9 125 1.19e-24 99.4
MS.gene75411.t1 MTR_5g078910 44.118 102 56 1 19 119 9 110 1.39e-24 99.4
MS.gene75411.t1 MTR_4g125520 45.000 100 54 1 14 112 9 108 1.84e-24 99.4
MS.gene75411.t1 MTR_8g017390 40.625 128 73 2 13 137 8 135 1.86e-24 101
MS.gene75411.t1 MTR_1g021230 47.917 96 47 2 19 112 59 153 3.21e-24 100
MS.gene75411.t1 MTR_1g086510 40.000 110 65 1 4 112 8 117 3.38e-24 97.8
MS.gene75411.t1 MTR_4g082290 40.833 120 62 2 4 122 7 118 5.35e-24 99.4
MS.gene75411.t1 MTR_8g020490 47.619 105 53 2 9 112 1 104 5.67e-24 96.7
MS.gene75411.t1 MTR_5g042030 49.474 95 47 1 19 112 9 103 6.43e-24 97.4
MS.gene75411.t1 MTR_1g100667 43.810 105 58 1 19 122 15 119 7.46e-24 97.1
MS.gene75411.t1 MTR_5g078950 41.121 107 62 1 12 117 2 108 8.87e-24 96.7
MS.gene75411.t1 MTR_2g067420 46.535 101 53 1 13 112 10 110 1.05e-23 97.4
MS.gene75411.t1 MTR_8g017340 44.444 108 58 1 14 119 9 116 1.43e-23 99.0
MS.gene75411.t1 MTR_4g082230 47.525 101 50 2 14 112 9 108 2.00e-23 97.8
MS.gene75411.t1 MTR_7g117730 41.818 110 55 2 4 112 7 108 2.28e-23 95.1
MS.gene75411.t1 MTR_8g060940 43.269 104 58 1 13 115 3 106 2.52e-23 94.7
MS.gene75411.t1 MTR_1g086530 44.898 98 51 2 17 112 33 129 2.81e-23 95.5
MS.gene75411.t1 MTR_5g088640 46.602 103 51 3 19 118 14 115 2.87e-23 95.5
MS.gene75411.t1 MTR_0008s0280 41.748 103 59 1 13 114 8 110 2.89e-23 94.4
MS.gene75411.t1 MTR_5g088080 46.602 103 51 3 19 118 14 115 3.01e-23 95.1
MS.gene75411.t1 MTR_5g088150 46.602 103 51 3 19 118 14 115 3.01e-23 95.1
MS.gene75411.t1 MTR_5g488210 46.602 103 51 3 19 118 14 115 3.01e-23 95.1
MS.gene75411.t1 MTR_5g088610 41.964 112 63 2 9 118 1 112 3.50e-23 96.7
MS.gene75411.t1 MTR_1g083630 37.143 140 83 3 9 144 1 139 3.58e-23 98.2
MS.gene75411.t1 MTR_2g096380 40.909 110 62 2 17 124 6 114 3.86e-23 94.4
MS.gene75411.t1 MTR_0197s0010 50.538 93 43 2 22 112 6 97 3.99e-23 94.0
MS.gene75411.t1 MTR_7g010210 30.612 196 115 5 13 188 8 202 4.31e-23 94.7
MS.gene75411.t1 MTR_8g017350 44.444 108 56 3 14 118 9 115 4.68e-23 97.8
MS.gene75411.t1 MTR_5g078800 41.509 106 61 1 19 123 9 114 4.96e-23 94.7
MS.gene75411.t1 MTR_7g010210 30.612 196 115 5 13 188 8 202 5.34e-23 95.5
MS.gene75411.t1 MTR_5g488170 46.602 103 51 3 19 118 14 115 6.37e-23 94.0
MS.gene75411.t1 MTR_5g078860 42.453 106 60 1 19 123 9 114 6.93e-23 95.1
MS.gene75411.t1 MTR_1g017140 45.545 101 53 2 14 112 9 109 9.30e-23 95.1
MS.gene75411.t1 MTR_5g014990 46.535 101 52 2 14 112 9 109 9.46e-23 94.7
MS.gene75411.t1 MTR_2g095520 44.554 101 54 2 14 112 9 109 1.29e-22 94.4
MS.gene75411.t1 MTR_3g083540 40.541 111 55 3 4 112 36 137 1.72e-22 94.0
MS.gene75411.t1 MTR_4g097570 43.137 102 55 2 14 112 9 110 2.06e-22 93.6
MS.gene75411.t1 MTR_0247s0040 42.574 101 57 1 13 112 3 103 2.28e-22 90.9
MS.gene75411.t1 MTR_5g079120 41.026 117 67 2 5 119 48 164 2.76e-22 93.2
MS.gene75411.t1 MTR_2g088170 48.598 107 52 2 14 118 26 131 3.98e-22 94.7
MS.gene75411.t1 MTR_0140s0030 38.333 120 65 2 4 122 8 119 5.73e-22 92.8
MS.gene75411.t1 MTR_0489s0020 38.333 120 65 2 4 122 8 119 5.73e-22 92.8
MS.gene75411.t1 MTR_6g012690 39.167 120 64 2 4 122 7 118 9.20e-22 92.8
MS.gene75411.t1 MTR_3g103570 43.137 102 56 2 13 112 8 109 1.14e-21 92.4
MS.gene75411.t1 MTR_6g090405 36.364 121 75 2 13 131 8 128 1.16e-21 90.5
MS.gene75411.t1 MTR_4g097570 42.574 101 56 2 14 112 9 109 2.03e-21 90.9
MS.gene75411.t1 MTR_5g078930 37.226 137 84 2 19 153 11 147 2.15e-21 89.4
MS.gene75411.t1 MTR_4g057635 36.752 117 72 2 13 127 8 124 2.69e-21 90.9
MS.gene75411.t1 MTR_3g039990 36.667 120 67 2 4 122 8 119 3.21e-21 90.5
MS.gene75411.t1 MTR_1g017000 34.146 164 99 6 13 174 8 164 3.36e-21 89.4
MS.gene75411.t1 MTR_6g012180 40.594 101 59 1 13 112 8 108 3.48e-21 90.5
MS.gene75411.t1 MTR_7g087130 37.405 131 70 3 4 130 7 129 3.66e-21 90.9
MS.gene75411.t1 MTR_4g128670 44.554 101 54 2 14 112 9 109 3.78e-21 90.9
MS.gene75411.t1 MTR_2g033170 41.509 106 60 2 19 123 26 130 4.94e-21 90.1
MS.gene75411.t1 MTR_0193s0090 39.252 107 64 1 13 118 3 109 9.97e-21 87.0
MS.gene75411.t1 MTR_7g102110 41.176 102 58 2 13 112 8 109 2.51e-20 87.4
MS.gene75411.t1 MTR_6g055910 47.561 82 43 0 52 133 21 102 8.11e-20 85.9
MS.gene75411.t1 MTR_4g123040 38.793 116 60 2 8 112 5 120 8.96e-20 86.7
MS.gene75411.t1 MTR_1g008970 56.522 69 29 1 42 109 113 181 9.21e-20 85.5
MS.gene75411.t1 MTR_7g035300 41.818 110 52 3 15 124 72 169 1.85e-19 84.3
MS.gene75411.t1 MTR_7g111290 57.377 61 26 0 52 112 6 66 4.68e-19 85.1
MS.gene75411.t1 MTR_7g109320 43.443 122 59 3 4 123 7 120 4.76e-19 85.1
MS.gene75411.t1 MTR_4g063100 45.205 73 40 0 52 124 14 86 5.94e-19 82.8
MS.gene75411.t1 MTR_4g128190 43.689 103 45 3 17 118 11 101 6.53e-19 82.8
MS.gene75411.t1 MTR_5g038910 40.594 101 58 1 22 120 29 129 3.46e-18 83.2
MS.gene75411.t1 MTR_5g038910 40.594 101 58 1 22 120 29 129 4.80e-18 82.4
MS.gene75411.t1 MTR_7g061550 41.176 102 57 2 21 119 9 110 1.38e-17 80.9
MS.gene75411.t1 MTR_5g007300 42.683 82 46 1 12 92 59 140 5.38e-17 75.5
MS.gene75411.t1 MTR_8g468380 38.462 91 56 0 22 112 25 115 1.00e-16 79.0
MS.gene75411.t1 MTR_2g096380 41.096 73 43 0 52 124 23 95 3.72e-16 75.1
MS.gene75411.t1 MTR_3g045430 33.945 109 71 1 15 122 11 119 9.87e-16 75.1
MS.gene75411.t1 MTR_1g085880 36.585 123 74 3 22 140 17 139 6.74e-15 71.2
MS.gene75411.t1 MTR_1g085770 41.000 100 57 2 22 119 17 116 2.89e-14 71.2
MS.gene75411.t1 MTR_6g080360 38.542 96 58 1 17 112 528 622 4.27e-13 68.9
MS.gene75411.t1 MTR_6g080360 33.333 102 67 1 11 112 471 571 3.35e-11 63.2
MS.gene75411.t1 MTR_6g080360 33.884 121 70 2 17 137 308 418 7.27e-13 68.2
MS.gene75411.t1 MTR_6g080360 33.333 102 67 1 11 112 251 351 7.61e-11 62.0
MS.gene75411.t1 MTR_0023s0210 38.272 81 49 1 13 92 3 83 9.02e-11 57.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75411.t1 AT4G18770 54.930 213 77 5 14 216 212 415 4.07e-70 221
MS.gene75411.t1 AT5G58850 50.000 208 71 6 16 205 102 294 2.50e-54 180
MS.gene75411.t1 AT3G27785 57.047 149 53 2 5 142 171 319 8.54e-53 176
MS.gene75411.t1 AT5G11050 70.909 110 32 0 16 125 102 211 1.06e-50 171
MS.gene75411.t1 AT5G40360 54.198 131 55 1 17 142 156 286 1.49e-44 153
MS.gene75411.t1 AT3G09370 60.748 107 40 1 16 120 127 233 4.94e-41 147
MS.gene75411.t1 AT3G09370 60.748 107 40 1 16 120 132 238 5.98e-41 147
MS.gene75411.t1 AT3G09370 60.748 107 40 1 16 120 140 246 9.22e-41 146
MS.gene75411.t1 AT2G25230 51.515 132 61 1 14 142 21 152 5.16e-40 138
MS.gene75411.t1 AT5G11510 38.860 193 96 4 17 199 79 259 1.18e-39 145
MS.gene75411.t1 AT5G11510 38.860 193 96 4 17 199 79 259 1.38e-39 145
MS.gene75411.t1 AT5G11510 38.860 193 96 4 17 199 79 259 1.49e-39 145
MS.gene75411.t1 AT5G11510 38.860 193 96 4 17 199 79 259 1.49e-39 145
MS.gene75411.t1 AT5G11510 38.860 193 96 4 17 199 79 259 1.49e-39 145
MS.gene75411.t1 AT5G02320 60.606 99 39 0 17 115 125 223 6.51e-38 139
MS.gene75411.t1 AT5G02320 60.606 99 39 0 17 115 125 223 6.51e-38 139
MS.gene75411.t1 AT5G02320 60.606 99 39 0 17 115 65 163 7.69e-38 138
MS.gene75411.t1 AT4G32730 56.863 102 44 0 17 118 85 186 1.31e-37 140
MS.gene75411.t1 AT4G32730 56.863 102 44 0 17 118 85 186 1.31e-37 140
MS.gene75411.t1 AT4G32730 56.863 102 44 0 17 118 85 186 1.31e-37 140
MS.gene75411.t1 AT4G32730 56.863 102 44 0 17 118 85 186 1.31e-37 140
MS.gene75411.t1 AT4G32730 41.758 182 92 2 17 196 85 254 1.76e-37 139
MS.gene75411.t1 AT5G40430 46.269 134 64 3 14 142 49 179 2.99e-34 124
MS.gene75411.t1 AT3G55730 51.923 104 50 0 18 121 55 158 3.47e-32 121
MS.gene75411.t1 AT3G09230 46.491 114 61 0 7 120 43 156 9.38e-32 120
MS.gene75411.t1 AT5G67300 46.847 111 56 1 18 125 5 115 5.79e-31 116
MS.gene75411.t1 AT4G37260 47.321 112 58 1 10 121 5 115 1.01e-30 116
MS.gene75411.t1 AT4G00540 51.304 115 51 2 16 127 100 212 1.50e-30 117
MS.gene75411.t1 AT4G00540 37.500 120 62 4 3 113 34 149 5.10e-15 73.9
MS.gene75411.t1 AT3G50060 47.115 104 55 0 18 121 5 108 2.25e-30 114
MS.gene75411.t1 AT1G69560 47.273 110 58 0 11 120 99 208 2.74e-30 115
MS.gene75411.t1 AT1G69560 47.273 110 58 0 11 120 115 224 3.00e-30 115
MS.gene75411.t1 AT4G00540 51.304 115 51 2 16 127 98 210 3.38e-30 116
MS.gene75411.t1 AT4G00540 39.048 105 55 3 18 113 43 147 1.09e-14 73.2
MS.gene75411.t1 AT2G39880 43.478 138 72 3 18 149 49 186 5.55e-30 115
MS.gene75411.t1 AT2G23290 47.115 104 55 0 18 121 12 115 8.84e-30 113
MS.gene75411.t1 AT1G17950 48.673 113 54 2 19 128 5 116 3.88e-29 110
MS.gene75411.t1 AT4G33450 49.550 111 53 1 12 119 12 122 4.36e-29 110
MS.gene75411.t1 AT1G26780 50.980 102 50 0 19 120 98 199 7.26e-29 110
MS.gene75411.t1 AT1G26780 50.980 102 50 0 19 120 98 199 1.29e-28 111
MS.gene75411.t1 AT4G22680 36.310 168 87 4 13 178 8 157 1.36e-28 109
MS.gene75411.t1 AT3G29020 47.525 101 53 0 19 119 65 165 3.04e-28 107
MS.gene75411.t1 AT5G59780 43.860 114 61 2 19 130 10 122 3.32e-28 107
MS.gene75411.t1 AT3G11440 44.643 112 60 2 10 119 34 145 3.99e-28 111
MS.gene75411.t1 AT1G22640 43.307 127 70 2 14 138 9 135 4.55e-28 107
MS.gene75411.t1 AT3G46130 44.737 114 60 2 19 130 11 123 5.61e-28 107
MS.gene75411.t1 AT3G11440 44.643 112 60 2 10 119 34 145 7.17e-28 111
MS.gene75411.t1 AT3G11440 44.643 112 60 2 10 119 34 145 7.17e-28 111
MS.gene75411.t1 AT3G11440 44.643 112 60 2 10 119 34 145 7.17e-28 111
MS.gene75411.t1 AT3G29020 47.525 101 53 0 19 119 67 167 8.90e-28 108
MS.gene75411.t1 AT2G31180 42.636 129 63 3 4 130 7 126 9.08e-28 106
MS.gene75411.t1 AT3G12720 30.364 247 129 8 14 227 19 255 1.08e-27 107
MS.gene75411.t1 AT4G12350 43.939 132 70 3 17 145 12 142 1.77e-27 107
MS.gene75411.t1 AT5G26660 39.726 146 82 4 14 154 9 153 1.96e-27 108
MS.gene75411.t1 AT4G26930 43.119 109 60 2 19 126 21 128 2.00e-27 108
MS.gene75411.t1 AT4G28110 46.729 107 56 1 13 118 8 114 2.09e-27 106
MS.gene75411.t1 AT5G16600 46.281 121 54 3 4 122 7 118 2.42e-27 107
MS.gene75411.t1 AT3G27810 47.000 100 52 1 14 112 17 116 2.85e-27 104
MS.gene75411.t1 AT3G28470 47.000 100 52 1 14 112 9 108 3.01e-27 107
MS.gene75411.t1 AT1G73410 50.467 107 50 1 19 122 6 112 3.23e-27 105
MS.gene75411.t1 AT1G63910 41.270 126 67 2 13 131 8 133 3.58e-27 107
MS.gene75411.t1 AT1G66230 46.281 121 54 3 4 122 7 118 3.64e-27 105
MS.gene75411.t1 AT2G26960 37.931 174 93 5 14 174 17 188 4.10e-27 108
MS.gene75411.t1 AT4G38620 45.161 124 64 3 14 134 9 131 5.88e-27 105
MS.gene75411.t1 AT3G01530 39.041 146 81 3 17 160 25 164 6.20e-27 103
MS.gene75411.t1 AT1G57560 37.662 154 82 3 14 165 9 150 6.81e-27 105
MS.gene75411.t1 AT1G09540 38.217 157 93 3 14 167 9 164 7.38e-27 106
MS.gene75411.t1 AT1G57560 44.643 112 59 2 14 123 9 119 7.65e-27 105
MS.gene75411.t1 AT1G73410 50.467 107 50 1 19 122 6 112 7.76e-27 103
MS.gene75411.t1 AT4G13480 44.697 132 64 4 19 148 8 132 8.60e-27 104
MS.gene75411.t1 AT3G60460 47.664 107 54 2 14 118 8 114 1.07e-26 105
MS.gene75411.t1 AT5G14340 36.471 170 81 4 4 171 19 163 1.21e-26 104
MS.gene75411.t1 AT3G24310 46.957 115 53 4 19 130 20 129 1.27e-26 104
MS.gene75411.t1 AT5G56110 41.912 136 73 2 14 143 9 144 1.35e-26 105
MS.gene75411.t1 AT2G47190 38.931 131 79 1 10 139 13 143 1.39e-26 104
MS.gene75411.t1 AT3G13890 42.593 108 61 1 13 119 8 115 1.43e-26 105
MS.gene75411.t1 AT1G74430 43.396 106 59 1 19 123 14 119 1.72e-26 103
MS.gene75411.t1 AT4G25560 47.619 105 54 1 19 122 12 116 2.58e-26 103
MS.gene75411.t1 AT5G07690 51.579 95 45 1 19 112 14 108 2.72e-26 104
MS.gene75411.t1 AT4G21440 45.794 107 57 1 14 119 9 115 2.93e-26 104
MS.gene75411.t1 AT5G14750 47.368 95 49 1 19 112 18 112 3.04e-26 101
MS.gene75411.t1 AT5G40350 46.667 105 54 2 17 120 17 120 3.09e-26 102
MS.gene75411.t1 AT5G10280 50.000 100 47 2 15 112 10 108 3.38e-26 104
MS.gene75411.t1 AT1G35515 44.144 111 61 1 14 123 9 119 3.42e-26 101
MS.gene75411.t1 AT1G06180 43.902 123 56 4 4 122 7 120 3.48e-26 102
MS.gene75411.t1 AT2G26950 45.794 107 55 2 14 118 13 118 3.77e-26 105
MS.gene75411.t1 AT5G40330 44.340 106 57 2 9 112 3 108 5.94e-26 101
MS.gene75411.t1 AT5G17800 43.966 116 62 1 19 131 93 208 7.00e-26 103
MS.gene75411.t1 AT5G06100 40.625 128 68 3 19 138 34 161 7.72e-26 105
MS.gene75411.t1 AT5G65230 49.020 102 49 2 13 112 8 108 8.23e-26 102
MS.gene75411.t1 AT3G02940 45.370 108 58 1 13 119 8 115 8.32e-26 102
MS.gene75411.t1 AT2G32460 48.039 102 50 2 19 118 20 120 8.46e-26 105
MS.gene75411.t1 AT2G32460 48.039 102 50 2 19 118 8 108 9.13e-26 105
MS.gene75411.t1 AT5G06100 40.625 128 68 3 19 138 34 161 1.27e-25 104
MS.gene75411.t1 AT5G06100 40.625 128 68 3 19 138 34 161 1.27e-25 104
MS.gene75411.t1 AT5G06100 40.625 128 68 3 19 138 34 161 1.27e-25 104
MS.gene75411.t1 AT5G06100 40.625 128 68 3 19 138 34 161 1.27e-25 104
MS.gene75411.t1 AT4G05100 46.226 106 56 1 14 118 10 115 1.29e-25 102
MS.gene75411.t1 AT3G02940 45.370 108 58 1 13 119 8 115 1.33e-25 102
MS.gene75411.t1 AT3G02940 45.370 108 58 1 13 119 8 115 1.33e-25 102
MS.gene75411.t1 AT5G61420 50.526 95 46 1 19 112 14 108 1.37e-25 103
MS.gene75411.t1 AT1G79180 46.154 104 53 2 13 114 10 112 1.44e-25 102
MS.gene75411.t1 AT3G08500 47.222 108 56 1 12 118 25 132 1.48e-25 102
MS.gene75411.t1 AT4G09460 46.296 108 55 2 14 119 9 115 1.64e-25 100
MS.gene75411.t1 AT3G13890 40.171 117 60 2 13 119 8 124 2.00e-25 102
MS.gene75411.t1 AT3G27920 46.316 95 50 1 19 112 16 110 2.19e-25 100
MS.gene75411.t1 AT4G01680 36.913 149 91 3 14 160 9 156 2.30e-25 100
MS.gene75411.t1 AT5G16770 47.059 102 53 1 19 119 14 115 2.54e-25 102
MS.gene75411.t1 AT5G16770 47.059 102 53 1 19 119 14 115 2.54e-25 102
MS.gene75411.t1 AT1G25340 41.463 123 69 2 19 139 20 141 2.55e-25 101
MS.gene75411.t1 AT3G48920 44.444 108 59 1 19 125 20 127 2.69e-25 100
MS.gene75411.t1 AT5G16770 47.059 102 53 1 19 119 14 115 3.90e-25 101
MS.gene75411.t1 AT5G16770 47.059 102 53 1 19 119 14 115 3.90e-25 101
MS.gene75411.t1 AT5G55020 47.917 96 47 2 19 112 28 122 4.06e-25 103
MS.gene75411.t1 AT5G12870 45.714 105 56 1 19 122 20 124 4.54e-25 100
MS.gene75411.t1 AT1G16490 42.727 110 62 1 13 121 10 119 4.76e-25 100
MS.gene75411.t1 AT5G07700 49.474 95 47 1 19 112 14 108 4.82e-25 101
MS.gene75411.t1 AT5G07700 49.474 95 47 1 19 112 14 108 4.82e-25 101
MS.gene75411.t1 AT3G61250 40.000 135 62 3 13 145 8 125 4.94e-25 100
MS.gene75411.t1 AT3G30210 47.222 108 50 3 19 124 29 131 5.83e-25 100
MS.gene75411.t1 AT1G56160 47.059 102 51 2 13 112 10 110 6.34e-25 100
MS.gene75411.t1 AT1G25340 39.669 121 69 1 19 139 20 136 7.14e-25 99.8
MS.gene75411.t1 AT3G23250 32.609 184 90 5 4 186 7 157 7.30e-25 99.8
MS.gene75411.t1 AT4G01680 36.913 149 91 3 14 160 9 156 8.75e-25 100
MS.gene75411.t1 AT1G68320 35.811 148 89 3 19 164 21 164 1.14e-24 99.4
MS.gene75411.t1 AT1G25340 39.669 121 69 1 19 139 20 136 1.33e-24 99.8
MS.gene75411.t1 AT3G13540 27.727 220 130 6 4 216 18 215 2.15e-24 97.8
MS.gene75411.t1 AT2G16720 42.276 123 69 2 14 134 9 131 3.09e-24 97.8
MS.gene75411.t1 AT3G53200 40.310 129 66 3 17 135 9 136 3.81e-24 97.1
MS.gene75411.t1 AT5G52600 44.545 110 56 2 4 112 3 108 5.74e-24 95.5
MS.gene75411.t1 AT5G35550 44.762 105 57 1 19 122 16 120 5.90e-24 97.1
MS.gene75411.t1 AT2G47460 36.424 151 86 3 4 152 7 149 6.20e-24 99.0
MS.gene75411.t1 AT4G34990 45.794 107 57 1 14 119 9 115 6.58e-24 97.1
MS.gene75411.t1 AT5G54230 47.423 97 50 1 17 112 12 108 9.05e-24 97.8
MS.gene75411.t1 AT1G48000 35.915 142 86 2 17 157 32 169 1.25e-23 95.9
MS.gene75411.t1 AT4G17785 45.714 105 54 2 17 119 13 116 1.78e-23 97.4
MS.gene75411.t1 AT4G01680 35.404 161 89 4 14 160 9 168 1.91e-23 97.1
MS.gene75411.t1 AT3G01140 45.000 100 54 1 14 112 9 108 1.96e-23 97.1
MS.gene75411.t1 AT1G18570 43.396 106 59 1 19 123 15 120 2.05e-23 97.1
MS.gene75411.t1 AT4G17785 45.714 105 54 2 17 119 13 116 2.14e-23 97.4
MS.gene75411.t1 AT3G01140 44.554 101 55 1 13 112 51 151 2.58e-23 97.4
MS.gene75411.t1 AT1G74080 48.421 95 48 1 19 112 14 108 3.18e-23 96.3
MS.gene75411.t1 AT3G62610 43.103 116 57 2 4 118 7 114 3.48e-23 96.3
MS.gene75411.t1 AT5G15310 44.554 101 55 1 13 112 8 108 4.49e-23 95.9
MS.gene75411.t1 AT5G15310 44.554 101 55 1 13 112 8 108 5.02e-23 95.5
MS.gene75411.t1 AT5G57620 45.545 101 53 2 14 112 9 109 6.76e-23 95.5
MS.gene75411.t1 AT5G15310 45.000 100 54 1 14 112 9 108 7.09e-23 94.0
MS.gene75411.t1 AT1G34670 48.485 99 42 2 19 112 14 108 7.68e-23 95.9
MS.gene75411.t1 AT5G60890 48.454 97 49 1 17 112 12 108 8.01e-23 94.7
MS.gene75411.t1 AT5G62320 44.545 110 51 3 19 119 15 123 8.83e-23 93.6
MS.gene75411.t1 AT5G62470 39.450 109 58 1 4 112 7 107 1.17e-22 95.1
MS.gene75411.t1 AT5G39700 44.444 99 55 0 20 118 57 155 1.29e-22 91.7
MS.gene75411.t1 AT5G49330 39.683 126 67 2 4 128 7 124 1.31e-22 94.7
MS.gene75411.t1 AT3G49690 46.535 101 52 2 14 112 9 109 2.94e-22 93.2
MS.gene75411.t1 AT1G74650 38.793 116 70 1 14 128 9 124 7.21e-22 92.8
MS.gene75411.t1 AT5G52260 47.170 106 53 2 19 122 14 118 8.65e-22 91.3
MS.gene75411.t1 AT5G65790 45.545 101 53 2 14 112 9 109 1.00e-21 92.8
MS.gene75411.t1 AT3G47600 38.739 111 67 1 13 122 8 118 1.66e-21 91.7
MS.gene75411.t1 AT5G26660 37.500 128 66 3 30 154 6 122 1.77e-21 91.3
MS.gene75411.t1 AT5G23000 41.667 108 61 2 14 119 9 116 2.52e-21 91.3
MS.gene75411.t1 AT3G12820 41.593 113 63 2 13 123 10 121 3.27e-21 89.4
MS.gene75411.t1 AT3G28910 38.739 111 67 1 13 122 8 118 3.77e-21 90.5
MS.gene75411.t1 AT5G62470 39.091 110 58 2 4 112 7 108 4.33e-21 90.9
MS.gene75411.t1 AT5G49620 37.600 125 77 1 16 139 25 149 5.92e-21 89.7
MS.gene75411.t1 AT1G79180 33.333 144 62 2 13 122 10 153 5.93e-21 90.1
MS.gene75411.t1 AT1G66370 40.909 110 56 2 19 123 10 115 6.64e-21 88.6
MS.gene75411.t1 AT1G18710 36.792 106 66 1 19 123 14 119 7.61e-21 89.0
MS.gene75411.t1 AT3G18100 41.379 116 59 1 19 134 546 652 1.16e-20 90.9
MS.gene75411.t1 AT3G18100 39.806 103 60 2 11 112 487 588 3.33e-15 75.1
MS.gene75411.t1 AT3G18100 41.379 116 59 1 19 134 385 491 1.70e-20 90.5
MS.gene75411.t1 AT3G18100 39.806 103 60 2 11 112 326 427 6.31e-15 74.3
MS.gene75411.t1 AT3G18100 41.379 116 59 1 19 134 498 604 1.74e-20 90.5
MS.gene75411.t1 AT3G18100 39.806 103 60 2 11 112 439 540 4.78e-15 74.7
MS.gene75411.t1 AT4G37780 40.594 101 58 2 14 112 9 109 1.78e-20 88.6
MS.gene75411.t1 AT3G18100 41.379 116 59 1 19 134 333 439 2.17e-20 90.1
MS.gene75411.t1 AT3G18100 39.806 103 60 2 11 112 274 375 7.57e-15 73.9
MS.gene75411.t1 AT1G08810 36.667 120 67 2 4 122 7 118 4.51e-20 87.0
MS.gene75411.t1 AT3G53200 44.565 92 43 1 52 135 12 103 1.44e-19 84.0
MS.gene75411.t1 AT3G27810 55.738 61 27 0 52 112 7 67 2.40e-19 82.8
MS.gene75411.t1 AT3G06490 42.857 98 53 2 17 112 19 115 2.65e-19 85.5
MS.gene75411.t1 AT5G35550 52.113 71 34 0 52 122 53 123 3.83e-19 84.0
MS.gene75411.t1 AT5G59780 43.038 79 45 0 52 130 23 101 5.77e-19 82.8
MS.gene75411.t1 AT3G46130 43.038 79 45 0 52 130 13 91 9.36e-19 82.4
MS.gene75411.t1 AT3G46130 43.038 79 45 0 52 130 23 101 1.14e-18 82.4
MS.gene75411.t1 AT1G66380 46.316 95 50 1 19 112 10 104 1.21e-18 79.7
MS.gene75411.t1 AT5G40350 52.174 69 32 1 52 120 8 75 2.09e-18 80.1
MS.gene75411.t1 AT5G14750 50.000 66 31 1 49 112 13 78 2.47e-18 79.7
MS.gene75411.t1 AT2G36890 40.594 101 58 2 14 112 9 109 3.17e-18 82.0
MS.gene75411.t1 AT1G56650 44.444 108 49 3 19 119 10 113 4.21e-18 80.9
MS.gene75411.t1 AT2G36890 40.196 102 59 2 13 112 49 150 4.54e-18 82.4
MS.gene75411.t1 AT1G66390 44.444 108 49 3 19 119 10 113 8.05e-18 80.1
MS.gene75411.t1 AT5G49620 33.813 139 77 2 16 139 25 163 1.42e-17 80.5
MS.gene75411.t1 AT1G14350 39.560 91 55 0 22 112 28 118 3.02e-17 80.5
MS.gene75411.t1 AT1G14350 39.560 91 55 0 22 112 28 118 3.02e-17 80.5
MS.gene75411.t1 AT3G12820 48.611 72 37 0 52 123 2 73 5.32e-17 76.6
MS.gene75411.t1 AT2G02820 39.560 91 55 0 22 112 33 123 6.59e-17 79.0
MS.gene75411.t1 AT2G02820 39.560 91 55 0 22 112 33 123 1.02e-16 79.0
MS.gene75411.t1 AT2G02820 39.560 91 55 0 22 112 33 123 1.07e-16 79.0
MS.gene75411.t1 AT2G37630 38.318 107 63 2 21 124 6 112 6.42e-16 76.3
MS.gene75411.t1 AT1G22640 46.154 78 41 1 62 138 1 78 1.36e-15 73.2
MS.gene75411.t1 AT3G47600 42.500 80 46 0 52 131 42 121 3.19e-15 73.9
MS.gene75411.t1 AT1G71030 42.647 68 39 0 55 122 5 72 1.01e-13 67.8
MS.gene75411.t1 AT1G71030 42.647 68 39 0 55 122 19 86 1.29e-13 67.8
MS.gene75411.t1 AT3G23250 32.800 125 59 3 62 186 1 100 1.67e-12 65.1
MS.gene75411.t1 AT5G14750 47.059 51 27 0 62 112 1 51 2.17e-12 63.2
MS.gene75411.t1 AT5G14750 47.059 51 27 0 62 112 1 51 2.17e-12 63.2
MS.gene75411.t1 AT1G66380 50.820 61 30 0 52 112 11 71 4.15e-12 61.6

Find 42 sgRNAs with CRISPR-Local

Find 102 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGTTGGACTTATTGTTTC+TGG 0.208598 5.4:+39599114 None:intergenic
AAACAGGTTGTTGATAAATT+TGG 0.222494 5.4:-39598963 MS.gene75411:intron
AACAATATGGATTGAGAAAA+TGG 0.259457 5.4:-39598937 MS.gene75411:CDS
ATAAATTTGGTTGAACAATA+TGG 0.264742 5.4:-39598950 MS.gene75411:CDS
TCATCTAAGGCCAGATATTA+AGG 0.302440 5.4:-39598852 MS.gene75411:intron
AATAAGTCCAACATTGTAAA+AGG 0.302515 5.4:-39599106 MS.gene75411:CDS
TAAATATGCACCTTAATATC+TGG 0.361547 5.4:+39598842 None:intergenic
AGTTCTCCCAGGTAACCTTT+TGG 0.388296 5.4:+39597859 None:intergenic
TATCATCGAAACAAATATCT+AGG 0.397614 5.4:+39597570 None:intergenic
AGCGATGGATTAATCATCTA+AGG 0.404504 5.4:-39598865 MS.gene75411:CDS
CAGAAATTGCCTGGTAGAAT+GGG 0.415190 5.4:-39598902 MS.gene75411:CDS
TTCTCTTTGTTGCATACCAA+TGG 0.423307 5.4:+39597819 None:intergenic
TCAGAAATTGCCTGGTAGAA+TGG 0.424216 5.4:-39598903 MS.gene75411:CDS
ACTGAGCTGATATTGTGCTT+TGG 0.426869 5.4:+39597651 None:intergenic
ATGAAAGCTCATGGAGAGTT+GGG 0.459209 5.4:-39597902 MS.gene75411:CDS
GATGATAATTTGTTTCAAGA+TGG 0.462758 5.4:-39597554 MS.gene75411:CDS
GCTTATTGCAGAAGGACATA+TGG 0.469322 5.4:-39597949 MS.gene75411:intron
ATGATAATTTGTTTCAAGAT+GGG 0.473555 5.4:-39597553 MS.gene75411:CDS
ATGGAGAGTTGGGAAACAAA+TGG 0.474382 5.4:-39597892 MS.gene75411:CDS
GATATTGTGCTTTGGTTGGT+TGG 0.479357 5.4:+39597659 None:intergenic
AGCTGATATTGTGCTTTGGT+TGG 0.481219 5.4:+39597655 None:intergenic
ATTGTTGAAGATACTATGCT+TGG 0.483599 5.4:-39597497 MS.gene75411:CDS
TGGCAAACACTCGCTGTCAC+TGG 0.483623 5.4:+39597679 None:intergenic
TGGAGAGTTGGGAAACAAAT+GGG 0.485266 5.4:-39597891 MS.gene75411:CDS
GATGAAAGCTCATGGAGAGT+TGG 0.489934 5.4:-39597903 MS.gene75411:CDS
AATGGACACTAGAAGAAGAT+AGG 0.491531 5.4:-39599081 MS.gene75411:intron
AAGATTGCCAAAAGGTTACC+TGG 0.505167 5.4:-39597866 MS.gene75411:CDS
GATATTGCTCAGAAATTGCC+TGG 0.518276 5.4:-39598911 MS.gene75411:CDS
AATGAGTTATTGCAAAAGAG+TGG 0.518576 5.4:-39599143 MS.gene75411:CDS
AAAATATTGATGAAAGCTCA+TGG 0.523945 5.4:-39597911 MS.gene75411:CDS
AGTTGATGTTAAGAAAGAGC+TGG 0.524954 5.4:-39597474 MS.gene75411:CDS
TAGCAAACACTCACTGTCAC+TGG 0.528697 5.4:+39597619 None:intergenic
AAAACTCAATTAAGAACCAT+TGG 0.528712 5.4:-39597835 MS.gene75411:CDS
TGTAGAAGAGTACTTCCACT+AGG 0.556277 5.4:+39597773 None:intergenic
ATGAGTTATTGCAAAAGAGT+GGG 0.560302 5.4:-39599142 MS.gene75411:CDS
AATGGGTAAAGATTGCCAAA+AGG 0.578915 5.4:-39597874 MS.gene75411:CDS
GTAGAAGAGTACTTCCACTA+GGG 0.594021 5.4:+39597774 None:intergenic
CCAACATTGTAAAAGGACAA+TGG 0.619413 5.4:-39599099 MS.gene75411:CDS
AGATTGCCAAAAGGTTACCT+GGG 0.630842 5.4:-39597865 MS.gene75411:CDS
GAAAACAGTGTAGAGAGCGA+TGG 0.636133 5.4:-39598880 MS.gene75411:CDS
GCAGAAGGACATATGGAGTG+AGG 0.656245 5.4:-39597942 MS.gene75411:intron
AGTGAGTGTTTGCTATCAAG+TGG 0.700440 5.4:-39597611 MS.gene75411:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATATAACTTTTTTTTATAA+AGG + chr5.4:39597852-39597871 None:intergenic 10.0%
!!! TTTTATATTTTTTACCAATT+TGG - chr5.4:39597562-39597581 MS.gene75411:CDS 10.0%
!! AAAATTCAATAAAAAGAATC+AGG + chr5.4:39597824-39597843 None:intergenic 15.0%
!! AAATACTAAAAAAAGAATCA+GGG + chr5.4:39597774-39597793 None:intergenic 15.0%
!! ACTTACTATTAAAAGTTATT+AGG + chr5.4:39598083-39598102 None:intergenic 15.0%
!! ATTGAAAAATAAATTTGTGT+TGG - chr5.4:39598177-39598196 MS.gene75411:intron 15.0%
!! AAAAATACCATCCTTAAAAT+TGG - chr5.4:39597949-39597968 MS.gene75411:intron 20.0%
!! AATACTAAAAAAAGAATCAG+GGG + chr5.4:39597773-39597792 None:intergenic 20.0%
!! ATAAATTTGGTTGAACAATA+TGG - chr5.4:39597634-39597653 MS.gene75411:CDS 20.0%
!! CCTATAAAAATCTAGATTAA+AGG + chr5.4:39598007-39598026 None:intergenic 20.0%
!! GAAATACTAAAAAAAGAATC+AGG + chr5.4:39597775-39597794 None:intergenic 20.0%
!!! AAATTTTTTAAAATGCTAGC+TGG + chr5.4:39598571-39598590 None:intergenic 20.0%
!!! ATGATAATTTGTTTCAAGAT+GGG - chr5.4:39599031-39599050 MS.gene75411:intron 20.0%
!!! ATTTTCTTGTATACTCTTTT+GGG + chr5.4:39598873-39598892 None:intergenic 20.0%
!!! CCTTTAATCTAGATTTTTAT+AGG - chr5.4:39598004-39598023 MS.gene75411:intron 20.0%
!!! TATATTGATGATCTGATAAA+AGG - chr5.4:39598345-39598364 MS.gene75411:intron 20.0%
! AAAACTCAATTAAGAACCAT+TGG - chr5.4:39598749-39598768 MS.gene75411:intron 25.0%
! AAAATATTGATGAAAGCTCA+TGG - chr5.4:39598673-39598692 MS.gene75411:intron 25.0%
! AATAAGTCCAACATTGTAAA+AGG - chr5.4:39597478-39597497 MS.gene75411:CDS 25.0%
! AATGAATGTAGTGATATTTG+GGG - chr5.4:39598397-39598416 MS.gene75411:intron 25.0%
! CTAACTCAACAATAGTATTT+GGG + chr5.4:39598426-39598445 None:intergenic 25.0%
! GAAAAATAAATTTGTGTTGG+TGG - chr5.4:39598180-39598199 MS.gene75411:intron 25.0%
! GAATGAATGTAGTGATATTT+GGG - chr5.4:39598396-39598415 MS.gene75411:intron 25.0%
! GTATTACCTAGAAAAATGTT+TGG - chr5.4:39598270-39598289 MS.gene75411:intron 25.0%
! TAAATATGCACCTTAATATC+TGG + chr5.4:39597745-39597764 None:intergenic 25.0%
! TATCATCGAAACAAATATCT+AGG + chr5.4:39599017-39599036 None:intergenic 25.0%
! TCTAACTCAACAATAGTATT+TGG + chr5.4:39598427-39598446 None:intergenic 25.0%
! TGAATGAATGTAGTGATATT+TGG - chr5.4:39598395-39598414 MS.gene75411:intron 25.0%
!! AAACAGGTTGTTGATAAATT+TGG - chr5.4:39597621-39597640 MS.gene75411:CDS 25.0%
!! AACAATATGGATTGAGAAAA+TGG - chr5.4:39597647-39597666 MS.gene75411:CDS 25.0%
!! GATTTTCTTGTATACTCTTT+TGG + chr5.4:39598874-39598893 None:intergenic 25.0%
!! TTTTCTTGTATACTCTTTTG+GGG + chr5.4:39598872-39598891 None:intergenic 25.0%
!!! GATGATAATTTGTTTCAAGA+TGG - chr5.4:39599030-39599049 MS.gene75411:intron 25.0%
!!! TTGATCGATTTTTTTTACTC+AGG - chr5.4:39599135-39599154 MS.gene75411:CDS 25.0%
AATACCATCCTTAAAATTGG+TGG - chr5.4:39597952-39597971 MS.gene75411:intron 30.0%
AATGTTGGACTTATTGTTTC+TGG + chr5.4:39597473-39597492 None:intergenic 30.0%
ACTATGTGTGTATATTTGCA+TGG + chr5.4:39598252-39598271 None:intergenic 30.0%
AGAATTTCAAGATTGAACCT+AGG + chr5.4:39597907-39597926 None:intergenic 30.0%
ATGAGTTATTGCAAAAGAGT+GGG - chr5.4:39597442-39597461 MS.gene75411:CDS 30.0%
ATGTCTCTGTATGTAAAAAC+AGG - chr5.4:39597605-39597624 MS.gene75411:CDS 30.0%
ATTGTTGAAGATACTATGCT+TGG - chr5.4:39599087-39599106 MS.gene75411:CDS 30.0%
CATCTATTCAACCTTCATTT+AGG + chr5.4:39598110-39598129 None:intergenic 30.0%
CTTGGATCAAAATTCCAAAT+TGG + chr5.4:39597579-39597598 None:intergenic 30.0%
TCAATAAAAAGAATCAGGAG+AGG + chr5.4:39597819-39597838 None:intergenic 30.0%
TCTATGCAATTAGACAAAGA+CGG - chr5.4:39598057-39598076 MS.gene75411:intron 30.0%
! AGTCTACCAAACATTTTTCT+AGG + chr5.4:39598279-39598298 None:intergenic 30.0%
! AGTGAAAACCACCAATTTTA+AGG + chr5.4:39597963-39597982 None:intergenic 30.0%
!! AAAACCACCAATTTTAAGGA+TGG + chr5.4:39597959-39597978 None:intergenic 30.0%
!! TTTGGAATTTTGATCCAAGT+AGG - chr5.4:39597580-39597599 MS.gene75411:CDS 30.0%
!!! TATACTCTTTTGGGGTTTTT+TGG + chr5.4:39598864-39598883 None:intergenic 30.0%
AATGGACACTAGAAGAAGAT+AGG - chr5.4:39597503-39597522 MS.gene75411:CDS 35.0%
AATGGGTAAAGATTGCCAAA+AGG - chr5.4:39598710-39598729 MS.gene75411:intron 35.0%
ACTAAAAAAAGAATCAGGGG+TGG + chr5.4:39597770-39597789 None:intergenic 35.0%
AGTAAGTGAGACCTAAATGA+AGG - chr5.4:39598096-39598115 MS.gene75411:intron 35.0%
ATACAGAGACATAACCTACT+TGG + chr5.4:39597597-39597616 None:intergenic 35.0%
ATGTTTGGTAGACTTGTCAA+TGG - chr5.4:39598285-39598304 MS.gene75411:intron 35.0%
CCAACATTGTAAAAGGACAA+TGG - chr5.4:39597485-39597504 MS.gene75411:CDS 35.0%
GTCACTAGCTAATGTACAAT+CGG + chr5.4:39597885-39597904 None:intergenic 35.0%
TTCTCTTTGTTGCATACCAA+TGG + chr5.4:39598768-39598787 None:intergenic 35.0%
! AGTTGATGTTAAGAAAGAGC+TGG - chr5.4:39599110-39599129 MS.gene75411:CDS 35.0%
! CCATTGTCCTTTTACAATGT+TGG + chr5.4:39597488-39597507 None:intergenic 35.0%
! TCATCTAAGGCCAGATATTA+AGG - chr5.4:39597732-39597751 MS.gene75411:CDS 35.0%
!! AGCGATGGATTAATCATCTA+AGG - chr5.4:39597719-39597738 MS.gene75411:CDS 35.0%
!! ATCTAAAGTGAGGGTTTTAG+TGG - chr5.4:39598203-39598222 MS.gene75411:intron 35.0%
!! TCAAAAAGAAAGTACCCTAG+TGG - chr5.4:39598796-39598815 MS.gene75411:intron 35.0%
AAGATTGCCAAAAGGTTACC+TGG - chr5.4:39598718-39598737 MS.gene75411:intron 40.0%
ACTGAGCTGATATTGTGCTT+TGG + chr5.4:39598936-39598955 None:intergenic 40.0%
AGATTGCCAAAAGGTTACCT+GGG - chr5.4:39598719-39598738 MS.gene75411:intron 40.0%
AGCTGATATTGTGCTTTGGT+TGG + chr5.4:39598932-39598951 None:intergenic 40.0%
AGTGGCATTATCCTTACCTT+TGG - chr5.4:39598221-39598240 MS.gene75411:intron 40.0%
ATGAAAGCTCATGGAGAGTT+GGG - chr5.4:39598682-39598701 MS.gene75411:intron 40.0%
ATGGAGAGTTGGGAAACAAA+TGG - chr5.4:39598692-39598711 MS.gene75411:intron 40.0%
CAGAAATTGCCTGGTAGAAT+GGG - chr5.4:39597682-39597701 MS.gene75411:CDS 40.0%
GATATTGCTCAGAAATTGCC+TGG - chr5.4:39597673-39597692 MS.gene75411:CDS 40.0%
GATATTGTGCTTTGGTTGGT+TGG + chr5.4:39598928-39598947 None:intergenic 40.0%
GCTTATTGCAGAAGGACATA+TGG - chr5.4:39598635-39598654 MS.gene75411:intron 40.0%
GTGGCATTATCCTTACCTTT+GGG - chr5.4:39598222-39598241 MS.gene75411:intron 40.0%
TATTTGCATGGCAAACCCAA+AGG + chr5.4:39598240-39598259 None:intergenic 40.0%
TCAGAAATTGCCTGGTAGAA+TGG - chr5.4:39597681-39597700 MS.gene75411:CDS 40.0%
TGCAATAAGCCACAACAAGA+GGG + chr5.4:39598625-39598644 None:intergenic 40.0%
TGGAGAGTTGGGAAACAAAT+GGG - chr5.4:39598693-39598712 MS.gene75411:intron 40.0%
TGTACATTAGCTAGTGACCT+AGG - chr5.4:39597887-39597906 MS.gene75411:CDS 40.0%
TTGTTGTGGCTTATTGCAGA+AGG - chr5.4:39598627-39598646 MS.gene75411:intron 40.0%
! ATTGAGTTTTCAGTTCTCCC+AGG + chr5.4:39598739-39598758 None:intergenic 40.0%
! TGGTTTTCACTAACCTAGCA+TGG - chr5.4:39597972-39597991 MS.gene75411:intron 40.0%
! TGTTGGTGGATCTAAAGTGA+GGG - chr5.4:39598194-39598213 MS.gene75411:intron 40.0%
!! AGTGAGTGTTTGCTATCAAG+TGG - chr5.4:39598973-39598992 MS.gene75411:intron 40.0%
!! CTAAAAGTACCCTCTTGTTG+TGG - chr5.4:39598613-39598632 MS.gene75411:intron 40.0%
!! GTAGAAGAGTACTTCCACTA+GGG + chr5.4:39598813-39598832 None:intergenic 40.0%
!! TGTAGAAGAGTACTTCCACT+AGG + chr5.4:39598814-39598833 None:intergenic 40.0%
AAGGAGACATACACCATGCT+AGG + chr5.4:39597988-39598007 None:intergenic 45.0%
CTGCAATAAGCCACAACAAG+AGG + chr5.4:39598626-39598645 None:intergenic 45.0%
GAAAACAGTGTAGAGAGCGA+TGG - chr5.4:39597704-39597723 MS.gene75411:CDS 45.0%
GATGAAAGCTCATGGAGAGT+TGG - chr5.4:39598681-39598700 MS.gene75411:intron 45.0%
GCTCTCTTATCTCTCTCAAG+AGG + chr5.4:39598316-39598335 None:intergenic 45.0%
TAGCAAACACTCACTGTCAC+TGG + chr5.4:39598968-39598987 None:intergenic 45.0%
! AGTTCTCCCAGGTAACCTTT+TGG + chr5.4:39598728-39598747 None:intergenic 45.0%
! CACTGTTTTCCCATTCTACC+AGG + chr5.4:39597694-39597713 None:intergenic 45.0%
! GTGTTGGTGGATCTAAAGTG+AGG - chr5.4:39598193-39598212 MS.gene75411:intron 45.0%
GCAGAAGGACATATGGAGTG+AGG - chr5.4:39598642-39598661 MS.gene75411:intron 50.0%
GCATGGCAAACCCAAAGGTA+AGG + chr5.4:39598235-39598254 None:intergenic 50.0%
TGGCAAACACTCGCTGTCAC+TGG + chr5.4:39598908-39598927 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 39597442 39599164 39597442 ID=MS.gene75411
chr5.4 mRNA 39597442 39599164 39597442 ID=MS.gene75411.t1;Parent=MS.gene75411
chr5.4 exon 39599082 39599164 39599082 ID=MS.gene75411.t1.exon1;Parent=MS.gene75411.t1
chr5.4 CDS 39599082 39599164 39599082 ID=cds.MS.gene75411.t1;Parent=MS.gene75411.t1
chr5.4 exon 39598853 39598979 39598853 ID=MS.gene75411.t1.exon2;Parent=MS.gene75411.t1
chr5.4 CDS 39598853 39598979 39598853 ID=cds.MS.gene75411.t1;Parent=MS.gene75411.t1
chr5.4 exon 39597442 39597960 39597442 ID=MS.gene75411.t1.exon3;Parent=MS.gene75411.t1
chr5.4 CDS 39597442 39597960 39597442 ID=cds.MS.gene75411.t1;Parent=MS.gene75411.t1
Gene Sequence

>MS.gene75411

ATGAGTTATTGCAAAAGAGTGGGCATGACCAGAAACAATAAGTCCAACATTGTAAAAGGACAATGGACACTAGAAGAAGATAGGTACACATAAAAATATCATTTACTTTTTCTGTCGCTGTTTTATATTTTTTACCAATTTGGAATTTTGATCCAAGTAGGTTATGTCTCTGTATGTAAAAACAGGTTGTTGATAAATTTGGTTGAACAATATGGATTGAGAAAATGGACTGATATTGCTCAGAAATTGCCTGGTAGAATGGGAAAACAGTGTAGAGAGCGATGGATTAATCATCTAAGGCCAGATATTAAGGTGCATATTTAGACCACCCCTGATTCTTTTTTTAGTATTTCTCATGTGTACTTGTGTTCAGACCTCTCCTGATTCTTTTTATTGAATTTTTTAGACCTTTATAAAAAAAAGTTATATGATTAGATTTTCCGATTGTACATTAGCTAGTGACCTAGGTTCAATCTTGAAATTCTTGTACGCTATAATAAAATGTATAAAAATACCATCCTTAAAATTGGTGGTTTTCACTAACCTAGCATGGTGTATGTCTCCTTTAATCTAGATTTTTATAGGTATAAAAAATACAAATAATGATGTAGAATTTCTATGCAATTAGACAAAGACGGCCTAATAACTTTTAATAGTAAGTGAGACCTAAATGAAGGTTGAATAGATGTGATTTTTTTATTAGAATAAATATTACGTCTTTTTCTTGTAAAATTTATTGAAAAATAAATTTGTGTTGGTGGATCTAAAGTGAGGGTTTTAGTGGCATTATCCTTACCTTTGGGTTTGCCATGCAAATATACACACATAGTATTACCTAGAAAAATGTTTGGTAGACTTGTCAATGGTGTAACCTCTTGAGAGAGATAAGAGAGCGTGATGTGATATATTGATGATCTGATAAAAGGAAAAAAGATCGAGAGAAAATGAAGTGTTGAATGAATGTAGTGATATTTGGGGTGTCCCAAATACTATTGTTGAGTTAGATATCTCGCATACATTTATTTCACATGTTATATGTTTTCATTTTCACTTCAACTAATAAATATTAGAGAATATAATTTAATTTTTCTAACTATTTTCTTTTATAATGTTTTTTAAAACAGATCCAGCTAGCATTTTAAAAAATTTACAAAATGTCAAAACACTGTTTCTAAAAGTACCCTCTTGTTGTGGCTTATTGCAGAAGGACATATGGAGTGAGGAAGAAGAAAAAATATTGATGAAAGCTCATGGAGAGTTGGGAAACAAATGGGTAAAGATTGCCAAAAGGTTACCTGGGAGAACTGAAAACTCAATTAAGAACCATTGGTATGCAACAAAGAGAAGAGAATATTCAAAAAGAAAGTACCCTAGTGGAAGTACTCTTCTACAAGAATATATCAAGAGCTTGAACTTAGACCAAAAAACCCCAAAAGAGTATACAAGAAAATCTTCAACTAAAGCCAGTGACAGCGAGTGTTTGCCAACCAACCAAAGCACAATATCAGCTCAGTCTCAGAAAGCCAGTGACAGTGAGTGTTTGCTATCAAGTGGTGATTTTGATGATGATATCCTAGATATTTGTTTCGATGATAATTTGTTTCAAGATGGGTGTAGTATTGATTCTCTGTTAGATGATATGCAAATTGTTGAAGATACTATGCTTGGAGTTGATGTTAAGAAAGAGCTGGATTTGATCGATTTTTTTTACTCAGGTCAATGA
Protein sequence

>MS.gene75411.t1

MSYCKRVGMTRNNKSNIVKGQWTLEEDRLLINLVEQYGLRKWTDIAQKLPGRMGKQCRERWINHLRPDIKKDIWSEEEEKILMKAHGELGNKWVKIAKRLPGRTENSIKNHWYATKRREYSKRKYPSGSTLLQEYIKSLNLDQKTPKEYTRKSSTKASDSECLPTNQSTISAQSQKASDSECLLSSGDFDDDILDICFDDNLFQDGCSIDSLLDDMQIVEDTMLGVDVKKELDLIDFFYSGQ