AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene75427

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75427.t1 MTR_3g088110 97.222 288 6 1 1 286 1 288 0.0 587
MS.gene75427.t1 MTR_8g094580 61.000 300 86 5 1 284 1 285 1.39e-118 342
MS.gene75427.t1 MTR_3g096920 59.283 307 89 6 1 286 1 292 4.80e-113 328
MS.gene75427.t1 MTR_3g096920 52.907 344 89 7 1 286 1 329 3.71e-105 309
MS.gene75427.t1 MTR_8g094580 57.317 246 74 5 55 284 1 231 6.11e-84 251
MS.gene75427.t1 MTR_2g080010 62.189 201 52 5 6 195 14 201 9.03e-81 248
MS.gene75427.t1 MTR_8g059170 70.552 163 46 2 3 164 10 171 3.73e-78 240
MS.gene75427.t1 MTR_7g085220 62.032 187 59 3 4 178 5 191 4.77e-78 240
MS.gene75427.t1 MTR_2g079990 65.698 172 55 2 3 173 12 180 7.71e-78 240
MS.gene75427.t1 MTR_2157s0010 66.871 163 44 2 7 159 8 170 4.70e-76 233
MS.gene75427.t1 MTR_4g089135 66.480 179 35 3 6 160 14 191 1.01e-75 234
MS.gene75427.t1 MTR_2g079990 57.868 197 57 2 3 173 12 208 5.75e-74 231
MS.gene75427.t1 MTR_5g041940 57.592 191 69 4 5 187 1 187 1.57e-72 224
MS.gene75427.t1 MTR_2g093810 61.538 169 61 2 3 167 10 178 4.09e-72 224
MS.gene75427.t1 MTR_7g100990 64.198 162 54 2 3 160 7 168 1.03e-71 224
MS.gene75427.t1 MTR_4g081870 62.893 159 57 2 2 158 4 162 2.59e-70 218
MS.gene75427.t1 MTR_5g040420 39.841 251 126 6 7 241 14 255 1.95e-58 191
MS.gene75427.t1 MTR_6g012670 52.071 169 79 2 4 171 17 184 5.87e-58 188
MS.gene75427.t1 MTR_6g084430 55.901 161 65 2 4 163 2 157 1.01e-57 188
MS.gene75427.t1 MTR_3g109340 48.276 203 93 3 2 199 17 212 3.61e-57 187
MS.gene75427.t1 MTR_3g109340 48.039 204 93 3 2 199 17 213 5.28e-57 187
MS.gene75427.t1 MTR_4g108760 51.786 168 79 2 4 170 14 180 3.07e-56 185
MS.gene75427.t1 MTR_2g064090 51.872 187 77 6 5 188 4 180 4.96e-56 184
MS.gene75427.t1 MTR_8g467490 46.040 202 78 5 9 192 16 204 6.96e-56 185
MS.gene75427.t1 MTR_6g011860 52.147 163 70 2 7 161 15 177 1.12e-55 184
MS.gene75427.t1 MTR_5g076850 57.500 160 62 4 5 161 4 160 1.65e-55 189
MS.gene75427.t1 MTR_3g435150 49.718 177 87 2 4 179 13 188 2.79e-55 181
MS.gene75427.t1 MTR_3g064580 53.409 176 77 3 5 177 4 177 6.97e-55 188
MS.gene75427.t1 MTR_3g070030 50.000 162 80 1 4 164 16 177 1.36e-54 181
MS.gene75427.t1 MTR_7g005280 55.294 170 65 3 4 170 12 173 2.61e-54 177
MS.gene75427.t1 MTR_1g008740 52.941 170 66 4 4 166 24 186 2.78e-54 180
MS.gene75427.t1 MTR_1g008740 52.941 170 66 4 4 166 10 172 2.93e-54 179
MS.gene75427.t1 MTR_2g062730 51.220 164 70 3 2 160 5 163 4.42e-54 179
MS.gene75427.t1 MTR_7g085260 52.326 172 75 3 5 170 15 185 5.12e-54 180
MS.gene75427.t1 MTR_4g134460 55.000 160 64 3 9 166 56 209 9.50e-54 181
MS.gene75427.t1 MTR_2g078700 54.658 161 67 3 4 160 20 178 1.70e-53 178
MS.gene75427.t1 MTR_6g477900 46.429 196 91 5 3 187 2 194 2.95e-53 174
MS.gene75427.t1 MTR_5g090970 52.201 159 66 3 9 157 20 178 2.28e-51 171
MS.gene75427.t1 MTR_5g012080 50.955 157 68 3 7 158 7 159 3.71e-51 171
MS.gene75427.t1 MTR_4g035590 47.701 174 81 3 7 176 8 175 5.14e-51 171
MS.gene75427.t1 MTR_4g101680 49.390 164 74 3 1 160 1 159 7.21e-51 171
MS.gene75427.t1 MTR_4g036030 48.171 164 76 3 1 160 1 159 2.41e-50 169
MS.gene75427.t1 MTR_6g032770 44.762 210 105 5 5 210 16 218 2.95e-50 170
MS.gene75427.t1 MTR_8g076110 49.375 160 72 3 7 162 6 160 4.82e-50 167
MS.gene75427.t1 MTR_5g090970 52.201 159 65 4 9 157 20 177 8.55e-50 167
MS.gene75427.t1 MTR_1g069805 50.955 157 67 2 7 160 10 159 2.01e-49 165
MS.gene75427.t1 MTR_5g021710 50.633 158 69 3 7 160 8 160 2.27e-49 167
MS.gene75427.t1 MTR_2g068880 39.544 263 129 8 9 245 24 282 7.73e-49 164
MS.gene75427.t1 MTR_2g064470 40.476 252 116 7 4 253 8 227 1.13e-48 164
MS.gene75427.t1 MTR_3g096140 48.148 162 78 3 1 159 1 159 2.22e-48 162
MS.gene75427.t1 MTR_7g011120 45.562 169 81 3 4 163 5 171 3.05e-48 163
MS.gene75427.t1 MTR_5g014300 52.174 161 61 5 7 157 6 160 5.40e-48 163
MS.gene75427.t1 MTR_8g024480 44.751 181 90 3 6 176 14 194 5.40e-48 166
MS.gene75427.t1 MTR_7g011130 44.571 175 80 3 4 163 16 188 1.23e-47 162
MS.gene75427.t1 MTR_2g068920 50.588 170 70 4 9 164 23 192 1.39e-47 160
MS.gene75427.t1 MTR_1g096430 48.447 161 74 3 1 157 1 156 1.66e-47 162
MS.gene75427.t1 MTR_3g096140 48.148 162 78 3 1 159 1 159 1.77e-47 162
MS.gene75427.t1 MTR_7g097090 50.980 153 65 2 7 156 10 155 2.37e-47 160
MS.gene75427.t1 MTR_3g116070 51.634 153 63 3 3 144 19 171 1.52e-46 160
MS.gene75427.t1 MTR_4g075980 46.386 166 77 3 1 162 9 166 3.76e-46 157
MS.gene75427.t1 MTR_8g099750 48.734 158 74 3 6 158 13 168 4.70e-46 155
MS.gene75427.t1 MTR_5g069030 38.346 266 141 7 6 264 24 273 4.70e-46 164
MS.gene75427.t1 MTR_3g098810 48.128 187 79 6 6 178 13 195 5.88e-46 155
MS.gene75427.t1 MTR_1g090720 50.955 157 71 3 7 157 42 198 2.56e-45 159
MS.gene75427.t1 MTR_4g098630 45.714 175 86 3 6 174 5 176 3.82e-45 155
MS.gene75427.t1 MTR_1g090723 48.780 164 74 6 9 168 10 167 4.08e-45 161
MS.gene75427.t1 MTR_8g063550 47.134 157 77 3 6 159 5 158 5.63e-45 155
MS.gene75427.t1 MTR_1g090723 48.780 164 73 6 9 168 10 166 1.58e-44 159
MS.gene75427.t1 MTR_8g063550 47.134 157 77 3 6 159 5 158 1.64e-44 156
MS.gene75427.t1 MTR_8g063550 47.134 157 77 3 6 159 5 158 1.83e-44 156
MS.gene75427.t1 MTR_1g097300 50.323 155 69 4 9 159 21 171 2.35e-44 158
MS.gene75427.t1 MTR_1g090723 48.780 164 73 6 9 168 10 166 2.52e-44 159
MS.gene75427.t1 MTR_0036s0150 49.405 168 74 6 5 168 3 163 2.66e-44 157
MS.gene75427.t1 MTR_3g093050 45.699 186 91 4 7 187 22 202 6.40e-44 157
MS.gene75427.t1 MTR_3g093050 46.196 184 89 4 7 185 22 200 7.54e-44 157
MS.gene75427.t1 MTR_3g093040 46.250 160 76 4 3 157 104 258 2.10e-42 148
MS.gene75427.t1 MTR_2g086880 48.649 148 64 4 9 154 20 157 1.87e-41 150
MS.gene75427.t1 MTR_2g086880 48.649 148 64 4 9 154 20 157 2.28e-41 149
MS.gene75427.t1 MTR_8g093580 36.929 241 140 8 6 241 5 238 2.81e-41 149
MS.gene75427.t1 MTR_3g098810 53.285 137 57 2 6 137 13 147 3.73e-41 140
MS.gene75427.t1 MTR_3g070040 43.636 165 84 4 4 164 5 164 2.89e-40 143
MS.gene75427.t1 MTR_8g023840 47.403 154 66 5 7 154 11 155 1.86e-37 137
MS.gene75427.t1 MTR_3g096140 45.390 141 71 3 22 159 1 138 4.79e-37 134
MS.gene75427.t1 MTR_4g052620 35.294 221 120 5 7 204 5 225 8.25e-35 126
MS.gene75427.t1 MTR_4g094302 42.675 157 76 3 7 157 11 159 2.27e-34 123
MS.gene75427.t1 MTR_4g094302 46.094 128 58 2 7 131 11 130 7.65e-33 118
MS.gene75427.t1 MTR_2g086690 43.030 165 80 6 8 161 5 166 1.01e-32 120
MS.gene75427.t1 MTR_8g023860 41.935 155 75 5 6 154 11 156 4.18e-32 123
MS.gene75427.t1 MTR_7g105170 36.747 166 93 6 7 161 4 168 3.99e-30 114
MS.gene75427.t1 MTR_8g023930 42.038 157 76 5 7 157 24 171 6.04e-30 117
MS.gene75427.t1 MTR_8g023900 39.412 170 89 7 7 170 12 173 9.68e-30 117
MS.gene75427.t1 MTR_8g023900 42.038 157 70 6 10 157 196 340 2.48e-29 116
MS.gene75427.t1 MTR_8g093790 39.264 163 75 6 3 164 6 145 1.44e-27 105
MS.gene75427.t1 MTR_8g023880 36.413 184 81 8 1 164 1 168 4.90e-26 103
MS.gene75427.t1 MTR_7g070140 52.273 88 39 1 60 144 17 104 7.21e-23 92.0
MS.gene75427.t1 MTR_7g083360 33.088 136 84 4 3 134 6 138 9.68e-21 86.7
MS.gene75427.t1 MTR_3g096400 32.121 165 96 4 1 155 1 159 1.54e-20 87.8
MS.gene75427.t1 MTR_7g083330 32.836 134 83 4 5 134 16 146 1.38e-18 82.0
MS.gene75427.t1 MTR_7g083370 30.534 131 84 4 7 133 10 137 2.27e-16 74.7
MS.gene75427.t1 MTR_8g102240 32.237 152 78 6 5 132 45 195 2.66e-12 67.0
MS.gene75427.t1 MTR_8g102240 32.237 152 78 6 5 132 45 195 2.66e-12 67.0
MS.gene75427.t1 MTR_4g078875 28.713 202 102 8 7 173 48 242 3.26e-12 65.9
MS.gene75427.t1 MTR_7g116460 31.515 165 95 8 13 167 11 167 6.20e-12 63.9
MS.gene75427.t1 MTR_1g087190 60.417 48 18 1 9 55 7 54 1.19e-11 59.3
MS.gene75427.t1 MTR_7g070150 47.222 72 31 3 103 174 9 73 1.83e-11 59.7
MS.gene75427.t1 MTR_8g069160 31.034 145 78 6 7 132 68 209 1.88e-11 63.5
MS.gene75427.t1 MTR_4g088245 31.034 145 78 6 7 132 68 209 3.39e-11 63.2
MS.gene75427.t1 MTR_1g093680 34.028 144 74 7 7 132 58 198 4.85e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75427.t1 AT1G01720 70.333 300 64 8 1 286 1 289 2.44e-145 409
MS.gene75427.t1 AT1G77450 62.030 266 53 5 2 264 5 225 3.18e-109 317
MS.gene75427.t1 AT5G08790 64.751 261 55 7 1 253 1 232 2.32e-107 313
MS.gene75427.t1 AT5G63790 55.290 293 78 6 1 286 44 290 1.87e-101 299
MS.gene75427.t1 AT5G63790 55.290 293 78 6 1 286 54 300 3.20e-101 299
MS.gene75427.t1 AT3G04070 61.307 199 63 5 7 194 10 205 1.37e-77 239
MS.gene75427.t1 AT3G15500 64.571 175 58 2 3 176 10 181 1.59e-77 238
MS.gene75427.t1 AT1G52890 50.575 261 94 7 3 231 10 267 1.96e-77 238
MS.gene75427.t1 AT4G27410 54.077 233 89 4 3 220 10 239 2.81e-77 237
MS.gene75427.t1 AT3G04070 57.477 214 63 5 7 194 10 221 3.58e-77 239
MS.gene75427.t1 AT1G61110 69.880 166 39 2 6 160 15 180 1.10e-76 236
MS.gene75427.t1 AT4G27410 50.800 250 88 5 3 220 10 256 5.46e-74 229
MS.gene75427.t1 AT3G15510 69.811 159 35 3 11 157 21 178 9.95e-72 225
MS.gene75427.t1 AT1G69490 63.580 162 57 2 1 160 3 164 7.92e-71 219
MS.gene75427.t1 AT1G52880 67.683 164 43 2 11 164 21 184 2.23e-67 213
MS.gene75427.t1 AT3G18400 55.280 161 67 2 4 163 2 158 1.76e-58 189
MS.gene75427.t1 AT5G61430 52.976 168 77 2 4 170 13 179 2.09e-57 187
MS.gene75427.t1 AT2G33480 59.355 155 54 3 5 158 13 159 7.15e-57 184
MS.gene75427.t1 AT5G07680 52.976 168 77 2 4 170 14 180 4.29e-56 184
MS.gene75427.t1 AT1G26870 48.691 191 81 3 7 188 16 198 5.46e-56 186
MS.gene75427.t1 AT2G02450 55.625 160 63 3 9 166 53 206 5.61e-56 185
MS.gene75427.t1 AT2G02450 55.625 160 63 3 9 166 53 206 7.54e-56 186
MS.gene75427.t1 AT5G07680 53.293 167 76 2 5 170 1 166 7.58e-56 182
MS.gene75427.t1 AT2G33480 58.065 155 58 3 5 158 13 161 1.01e-55 181
MS.gene75427.t1 AT5G39610 55.556 162 70 2 5 165 18 178 2.96e-55 180
MS.gene75427.t1 AT5G39820 48.603 179 71 3 9 166 22 200 3.70e-55 182
MS.gene75427.t1 AT1G65910 52.222 180 77 5 5 178 4 180 4.86e-55 188
MS.gene75427.t1 AT2G43000 53.614 166 73 3 9 173 20 182 7.63e-55 179
MS.gene75427.t1 AT5G53950 55.625 160 55 3 7 157 17 169 1.27e-54 181
MS.gene75427.t1 AT3G15170 51.220 164 76 2 4 164 17 179 4.51e-54 178
MS.gene75427.t1 AT5G13180 53.143 175 72 3 5 176 12 179 6.70e-54 176
MS.gene75427.t1 AT3G04060 56.129 155 65 2 5 157 18 171 9.55e-54 178
MS.gene75427.t1 AT2G24430 53.012 166 65 3 4 163 13 171 1.24e-53 177
MS.gene75427.t1 AT2G24430 53.012 166 65 3 4 163 13 171 1.24e-53 177
MS.gene75427.t1 AT3G03200 53.939 165 68 5 5 165 4 164 1.27e-53 181
MS.gene75427.t1 AT1G76420 53.750 160 67 3 3 159 18 173 1.31e-53 177
MS.gene75427.t1 AT5G18270 56.129 155 65 2 5 157 19 172 4.18e-53 176
MS.gene75427.t1 AT5G17260 53.333 165 69 5 5 165 4 164 4.19e-53 180
MS.gene75427.t1 AT5G18270 56.129 155 65 2 5 157 19 172 7.37e-53 176
MS.gene75427.t1 AT3G17730 50.000 180 79 5 7 178 6 182 1.38e-52 172
MS.gene75427.t1 AT3G29035 62.595 131 48 1 2 131 19 149 4.35e-52 173
MS.gene75427.t1 AT1G79580 50.000 162 70 3 2 158 12 167 9.85e-52 174
MS.gene75427.t1 AT1G79580 50.000 162 70 3 2 158 12 167 9.85e-52 174
MS.gene75427.t1 AT1G79580 50.000 162 70 3 2 158 12 167 9.85e-52 174
MS.gene75427.t1 AT1G79580 50.000 162 70 3 2 158 12 167 9.85e-52 174
MS.gene75427.t1 AT1G79580 50.000 162 70 3 2 158 12 167 9.85e-52 174
MS.gene75427.t1 AT4G17980 53.205 156 67 3 7 157 6 160 1.85e-51 170
MS.gene75427.t1 AT4G17980 53.205 156 67 3 7 157 6 160 2.76e-51 170
MS.gene75427.t1 AT4G10350 53.205 156 66 3 7 158 9 161 5.92e-51 171
MS.gene75427.t1 AT1G56010 45.361 194 91 4 4 195 16 196 5.52e-50 168
MS.gene75427.t1 AT1G33280 51.923 156 65 3 7 158 8 157 5.82e-50 167
MS.gene75427.t1 AT1G62700 50.000 162 72 3 1 158 1 157 8.22e-50 169
MS.gene75427.t1 AT1G62700 50.000 162 72 3 1 158 1 157 8.22e-50 169
MS.gene75427.t1 AT5G62380 50.000 164 73 3 1 160 1 159 1.04e-49 168
MS.gene75427.t1 AT5G62380 50.000 164 73 3 1 160 1 159 1.04e-49 168
MS.gene75427.t1 AT2G18060 50.000 158 70 3 7 160 9 161 1.31e-49 168
MS.gene75427.t1 AT2G18060 50.000 158 70 3 7 160 9 161 1.31e-49 168
MS.gene75427.t1 AT1G12260 50.307 163 70 4 1 158 1 157 1.33e-49 167
MS.gene75427.t1 AT3G10490 51.948 154 69 3 7 157 27 178 1.45e-49 164
MS.gene75427.t1 AT1G71930 50.323 155 68 3 7 157 9 158 1.81e-49 166
MS.gene75427.t1 AT1G71930 50.323 155 68 3 7 157 9 158 1.81e-49 166
MS.gene75427.t1 AT1G12260 50.307 163 70 4 1 158 1 157 2.28e-49 168
MS.gene75427.t1 AT4G36160 51.282 156 67 3 7 158 10 160 2.58e-49 167
MS.gene75427.t1 AT4G36160 51.282 156 67 3 7 158 10 160 2.58e-49 167
MS.gene75427.t1 AT3G10480 50.943 159 73 3 2 157 22 178 2.66e-49 169
MS.gene75427.t1 AT4G36160 51.282 156 67 3 7 158 14 164 2.85e-49 167
MS.gene75427.t1 AT3G10480 50.314 159 73 3 2 157 22 177 2.87e-49 169
MS.gene75427.t1 AT3G10500 50.588 170 75 4 2 168 4 167 5.64e-49 171
MS.gene75427.t1 AT5G04410 50.588 170 75 4 2 168 4 167 1.05e-48 170
MS.gene75427.t1 AT5G66300 50.314 159 71 3 7 161 12 166 1.16e-48 163
MS.gene75427.t1 AT2G46770 47.904 167 73 4 6 158 15 181 1.27e-48 166
MS.gene75427.t1 AT3G12977 50.323 155 74 3 4 157 15 167 1.46e-48 163
MS.gene75427.t1 AT1G54330 51.534 163 70 3 5 164 4 160 1.50e-48 163
MS.gene75427.t1 AT5G46590 52.903 155 67 4 7 157 6 158 1.51e-48 163
MS.gene75427.t1 AT3G10490 51.948 154 69 3 7 157 27 178 3.07e-48 166
MS.gene75427.t1 AT1G33060 53.205 156 63 4 7 157 24 174 3.60e-48 170
MS.gene75427.t1 AT1G33060 53.205 156 63 4 7 157 24 174 3.72e-48 170
MS.gene75427.t1 AT4G35580 54.487 156 61 4 7 157 9 159 4.01e-48 168
MS.gene75427.t1 AT4G35580 54.487 156 61 4 7 157 9 159 4.07e-48 168
MS.gene75427.t1 AT4G35580 54.487 156 61 4 7 157 9 159 5.01e-48 167
MS.gene75427.t1 AT2G17040 47.590 166 74 4 1 162 1 157 6.85e-48 161
MS.gene75427.t1 AT1G32770 47.273 165 76 3 6 159 15 179 2.72e-47 162
MS.gene75427.t1 AT5G46590 54.286 140 60 2 7 142 6 145 2.74e-47 159
MS.gene75427.t1 AT4G28530 48.538 171 62 3 6 157 9 172 1.14e-46 160
MS.gene75427.t1 AT3G61910 43.956 182 84 5 6 169 10 191 3.19e-46 158
MS.gene75427.t1 AT1G34180 48.466 163 75 5 9 168 18 174 3.86e-46 161
MS.gene75427.t1 AT1G34190 49.080 163 74 5 9 168 18 174 9.27e-46 162
MS.gene75427.t1 AT1G34180 48.466 163 75 5 9 168 18 174 2.44e-45 161
MS.gene75427.t1 AT3G12910 50.000 164 66 5 9 157 23 185 2.59e-45 155
MS.gene75427.t1 AT5G24590 39.608 255 110 9 7 222 13 262 2.80e-45 159
MS.gene75427.t1 AT1G32510 50.000 162 67 4 7 157 6 164 7.30e-45 153
MS.gene75427.t1 AT1G34180 45.143 175 75 5 9 168 18 186 2.45e-44 156
MS.gene75427.t1 AT3G10480 43.229 192 71 4 2 157 22 211 2.92e-44 157
MS.gene75427.t1 AT1G34180 45.143 175 75 5 9 168 18 186 1.37e-43 156
MS.gene75427.t1 AT5G09330 46.497 157 78 3 6 159 5 158 7.14e-43 153
MS.gene75427.t1 AT5G09330 46.497 157 78 3 6 159 5 158 7.14e-43 153
MS.gene75427.t1 AT5G09330 46.497 157 78 3 6 159 5 158 7.14e-43 153
MS.gene75427.t1 AT5G09330 46.497 157 78 3 6 159 5 158 7.14e-43 153
MS.gene75427.t1 AT5G09330 46.497 157 78 3 6 159 5 158 7.14e-43 153
MS.gene75427.t1 AT3G49530 46.541 159 78 3 7 161 13 168 8.66e-43 151
MS.gene75427.t1 AT5G64060 46.154 156 78 4 7 159 6 158 1.22e-42 149
MS.gene75427.t1 AT3G49530 46.541 159 78 3 7 161 13 168 2.19e-42 151
MS.gene75427.t1 AT1G32870 50.303 165 73 5 7 168 10 168 5.27e-39 143
MS.gene75427.t1 AT1G32870 50.303 165 73 5 7 168 10 168 5.83e-39 143
MS.gene75427.t1 AT1G32870 50.303 165 73 5 7 168 46 204 6.90e-39 143
MS.gene75427.t1 AT2G27300 50.400 125 60 2 7 129 14 138 7.87e-39 139
MS.gene75427.t1 AT3G44290 41.718 163 79 4 9 165 16 168 1.65e-37 132
MS.gene75427.t1 AT5G22290 42.073 164 78 5 9 165 23 176 2.67e-37 135
MS.gene75427.t1 AT3G44290 41.718 163 79 4 9 165 16 168 1.09e-36 133
MS.gene75427.t1 AT5G61430 51.220 123 46 3 55 170 1 116 1.77e-34 126
MS.gene75427.t1 AT5G64530 39.884 173 78 4 5 163 1 161 2.55e-34 123
MS.gene75427.t1 AT5G04395 41.558 154 73 3 2 138 23 176 1.14e-33 121
MS.gene75427.t1 AT5G64530 47.727 132 54 3 5 133 1 120 4.62e-33 119
MS.gene75427.t1 AT2G33480 57.000 100 39 2 60 158 8 104 1.55e-32 119
MS.gene75427.t1 AT3G44350 36.000 225 112 10 1 202 1 216 6.46e-32 118
MS.gene75427.t1 AT5G22380 34.962 266 122 14 1 250 1 231 8.17e-32 118
MS.gene75427.t1 AT1G56010 43.836 146 68 3 55 199 1 133 1.16e-31 118
MS.gene75427.t1 AT4G10350 54.286 105 44 2 55 158 13 114 3.40e-31 118
MS.gene75427.t1 AT4G28530 38.095 168 47 2 6 157 9 135 1.28e-30 117
MS.gene75427.t1 AT3G12977 52.427 103 46 3 56 157 14 114 2.79e-29 111
MS.gene75427.t1 AT3G44350 40.845 142 71 5 1 133 1 138 4.25e-29 108
MS.gene75427.t1 AT4G01520 37.356 174 91 6 8 171 5 170 8.79e-27 106
MS.gene75427.t1 AT4G01550 34.848 198 113 5 10 200 7 195 1.06e-26 108
MS.gene75427.t1 AT4G01540 37.791 172 89 6 10 171 7 170 1.07e-25 105
MS.gene75427.t1 AT4G01540 37.791 172 89 6 10 171 7 170 1.50e-25 105
MS.gene75427.t1 AT4G01540 37.791 172 89 6 10 171 7 170 1.70e-25 105
MS.gene75427.t1 AT4G01540 37.791 172 89 6 10 171 7 170 2.37e-25 105
MS.gene75427.t1 AT3G04420 40.000 130 73 3 5 129 1 130 2.93e-25 102
MS.gene75427.t1 AT3G04420 40.000 130 73 3 5 129 1 130 7.41e-25 102
MS.gene75427.t1 AT1G02230 40.000 130 67 5 8 129 4 130 8.29e-24 99.8
MS.gene75427.t1 AT2G43000 48.113 106 51 3 69 173 2 104 1.72e-23 95.5
MS.gene75427.t1 AT5G14000 33.333 180 103 5 5 181 13 178 3.66e-23 94.7
MS.gene75427.t1 AT5G14000 37.241 145 86 3 5 146 13 155 1.15e-22 92.0
MS.gene75427.t1 AT1G02220 38.462 130 72 4 5 129 1 127 1.07e-20 91.3
MS.gene75427.t1 AT1G02250 40.000 130 67 5 8 129 4 130 1.53e-20 90.5
MS.gene75427.t1 AT1G01010 35.185 162 74 7 10 154 6 153 5.36e-20 89.7
MS.gene75427.t1 AT3G10490 50.633 79 36 2 80 157 2 78 5.09e-18 83.2
MS.gene75427.t1 AT3G10490 50.633 79 36 2 80 157 2 78 5.09e-18 83.2
MS.gene75427.t1 AT3G56530 33.333 159 91 6 4 155 49 199 1.80e-17 81.3
MS.gene75427.t1 AT5G50820 35.821 134 69 5 5 131 15 138 2.32e-17 78.6
MS.gene75427.t1 AT3G04430 37.121 132 68 5 13 130 6 136 1.10e-15 74.3
MS.gene75427.t1 AT2G18060 44.156 77 37 2 85 160 2 73 4.47e-15 73.9
MS.gene75427.t1 AT4G29230 33.775 151 74 7 7 132 48 197 4.55e-13 69.3
MS.gene75427.t1 AT4G29230 33.775 151 74 7 7 132 47 196 4.58e-13 69.3
MS.gene75427.t1 AT4G29230 33.775 151 74 7 7 132 48 197 4.62e-13 69.3
MS.gene75427.t1 AT5G22290 41.860 86 34 4 86 165 2 77 2.28e-12 65.9
MS.gene75427.t1 AT5G56620 30.519 154 78 6 7 132 43 195 1.14e-11 65.1
MS.gene75427.t1 AT5G56620 30.519 154 78 6 7 132 43 195 1.27e-11 65.1
MS.gene75427.t1 AT5G56620 30.519 154 78 6 7 132 43 195 1.51e-11 64.7
MS.gene75427.t1 AT5G14490 29.101 189 96 9 7 169 55 231 2.24e-11 63.9
MS.gene75427.t1 AT5G14490 29.101 189 96 9 7 169 58 234 2.44e-11 63.9
MS.gene75427.t1 AT5G14490 29.101 189 96 9 7 169 55 231 2.87e-11 63.2
MS.gene75427.t1 AT5G14490 29.101 189 96 9 7 169 58 234 3.46e-11 63.5

Find 96 sgRNAs with CRISPR-Local

Find 138 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGCAATGGATTAGTATTT+TGG 0.127740 3.3:-73349695 None:intergenic
CGCAAACTACGGCTGGAATT+AGG 0.167335 3.3:+73349484 MS.gene75427:CDS
TTTCAATGCTCAAAAGGTTT+TGG 0.226943 3.3:-73349736 None:intergenic
GCCACCCTGAACACTGGTTT+TGG 0.242265 3.3:+73349669 MS.gene75427:CDS
TTCTTGATTCCAACCGGTTT+AGG 0.266059 3.3:-73348684 None:intergenic
GGGCGGCTGGGTCTGGATAT+TGG 0.274315 3.3:+73348628 MS.gene75427:CDS
TTTATAGGTATGGCTTCTTA+TGG 0.275721 3.3:+73348540 MS.gene75427:intron
TCAAGGCCGAACCGGGCGGC+TGG 0.280890 3.3:+73348615 MS.gene75427:CDS
CCGAACCGGGCGGCTGGGTC+TGG 0.306529 3.3:+73348621 MS.gene75427:CDS
TCTTGATTCCAACCGGTTTA+GGG 0.332888 3.3:-73348683 None:intergenic
GCAAACTACGGCTGGAATTA+GGG 0.333355 3.3:+73349485 MS.gene75427:CDS
CGGTTCGGCCTTGAACCGTT+TGG 0.337242 3.3:-73348606 None:intergenic
TGCCCTTCTTGTTGTAAATA+CGG 0.356578 3.3:-73349344 None:intergenic
GGAAGCCAAAACCAGTGTTC+AGG 0.356962 3.3:-73349674 None:intergenic
GGTTCGGCCTTGAACCGTTT+GGG 0.375212 3.3:-73348605 None:intergenic
ATCTATATAAATATGATCCT+TGG 0.383433 3.3:+73348353 MS.gene75427:CDS
GTGGCATCCACGTAATTATA+AGG 0.393502 3.3:-73349651 None:intergenic
TCTGGATATTGGAAGGCAAC+CGG 0.400133 3.3:+73348639 MS.gene75427:CDS
CTCGAATCGGTGTGCAGCTT+AGG 0.410548 3.3:-73349540 None:intergenic
CGGTTAACAACACCGTTGCT+TGG 0.420254 3.3:-73349381 None:intergenic
ACCGGTTTAGGGTGACCTAT+TGG 0.422320 3.3:-73348672 None:intergenic
CCAGACCCAGCCGCCCGGTT+CGG 0.426418 3.3:-73348621 None:intergenic
CGTAATTATAAGGAAATTCA+AGG 0.432406 3.3:-73349641 None:intergenic
CCAGCCGTAGTTTGCGGCGG+AGG 0.437220 3.3:-73349477 None:intergenic
CAAACGGTTCAAGGCCGAAC+CGG 0.447727 3.3:+73348607 MS.gene75427:CDS
CTGGATATTGGAAGGCAACC+GGG 0.449962 3.3:+73348640 MS.gene75427:CDS
TTAGTCTTTCAATGCTCAAA+AGG 0.450762 3.3:-73349742 None:intergenic
CAAGGCCGAACCGGGCGGCT+GGG 0.451424 3.3:+73348616 MS.gene75427:CDS
TAGGCTGCGACGTGCATTTG+CGG 0.459621 3.3:-73348303 None:intergenic
AAAGCTTTCTTGATTCCAAC+CGG 0.462419 3.3:-73348690 None:intergenic
GATCATGCACGAGTATCGTT+TGG 0.466085 3.3:+73348758 MS.gene75427:CDS
CTAAAGGTGATAAAACCAAT+TGG 0.468401 3.3:+73348736 MS.gene75427:CDS
ACCTATTGGTTTATCCGCCC+CGG 0.468728 3.3:-73348658 None:intergenic
GTAGTTTGCGGCGGAGGATG+TGG 0.472297 3.3:-73349471 None:intergenic
ACCAATAGGTCACCCTAAAC+CGG 0.472837 3.3:+73348671 MS.gene75427:CDS
CTAATTCCAGCCGTAGTTTG+CGG 0.474275 3.3:-73349483 None:intergenic
TATGGCTTCTTATGGAGAAA+AGG 0.474341 3.3:+73348548 MS.gene75427:CDS
TCTATATAAATATGATCCTT+GGG 0.481892 3.3:+73348354 MS.gene75427:CDS
GTGAGCCTAAGTGGAATGAA+TGG 0.482300 3.3:+73349610 MS.gene75427:CDS
GAAGCCAAAACCAGTGTTCA+GGG 0.483454 3.3:-73349673 None:intergenic
GGTTGGAATCAAGAAAGCTT+TGG 0.483861 3.3:+73348692 MS.gene75427:CDS
GAAAGTACCCAAACGGTTCA+AGG 0.487674 3.3:+73348598 MS.gene75427:CDS
AGGTGCAGAGTGAGCCTAAG+TGG 0.496331 3.3:+73349601 MS.gene75427:CDS
CCTCCGCCGCAAACTACGGC+TGG 0.497456 3.3:+73349477 MS.gene75427:CDS
ATACTCGTGCATGATCCAAT+TGG 0.497532 3.3:-73348751 None:intergenic
TTCTCCCATTCATTCCACTT+AGG 0.500482 3.3:-73349615 None:intergenic
TTGCCGTATTTACAACAAGA+AGG 0.503330 3.3:+73349341 MS.gene75427:CDS
CGAGCTCCTCATCCGTTGGA+TGG 0.515341 3.3:-73348264 None:intergenic
GCACACCGATTCGAGCTGTT+CGG 0.523824 3.3:+73349548 MS.gene75427:CDS
CCTCCACGTGTCACGATCTC+CGG 0.524239 3.3:-73349438 None:intergenic
ATCCGAGCTTCAATTACCAC+CGG 0.527594 3.3:+73348231 MS.gene75427:CDS
ACATCCTCCGCCGCAAACTA+CGG 0.532859 3.3:+73349473 MS.gene75427:CDS
TTCGGAGCACGTGGTATCAC+CGG 0.534411 3.3:+73349566 MS.gene75427:CDS
CAGATTCCATCCAACGGATG+AGG 0.542143 3.3:+73348258 MS.gene75427:CDS
AAACGGTTCAAGGCCGAACC+GGG 0.545704 3.3:+73348608 MS.gene75427:CDS
TGAGCCTAAGTGGAATGAAT+GGG 0.547748 3.3:+73349611 MS.gene75427:CDS
ACCGGGGCGGATAAACCAAT+AGG 0.550145 3.3:+73348657 MS.gene75427:CDS
GCGATGATCGGAACGGCGAT+AGG 0.550339 3.3:-73348322 None:intergenic
TGCACCTCACTTGCAAACTC+CGG 0.557338 3.3:-73349585 None:intergenic
TACGCGGGTAAAGCACCTAA+AGG 0.558141 3.3:+73348720 MS.gene75427:CDS
GAGATCGTGACACGTGGAGG+TGG 0.558979 3.3:+73349441 MS.gene75427:CDS
CTTCTTATGGAGAAAAGGAA+TGG 0.562020 3.3:+73348553 MS.gene75427:CDS
TTTGGGTACTTTCTGTCTCG+TGG 0.562928 3.3:-73348588 None:intergenic
GTGCTCCGAACAGCTCGAAT+CGG 0.563123 3.3:-73349553 None:intergenic
TGCCGTATTTACAACAAGAA+GGG 0.564535 3.3:+73349342 MS.gene75427:CDS
ATCACCGGAGTTTGCAAGTG+AGG 0.564595 3.3:+73349581 MS.gene75427:CDS
AACATTCTGAAATCGAAGAC+AGG 0.566257 3.3:+73349412 MS.gene75427:CDS
GTGGATGCCACCCTGAACAC+TGG 0.570340 3.3:+73349663 MS.gene75427:CDS
GATTTACCTGGGAGGTCCCA+AGG 0.574322 3.3:-73348370 None:intergenic
GCCCGGTGGTAATTGAAGCT+CGG 0.575509 3.3:-73348233 None:intergenic
TGAAATCGAAGACAGGAAGC+CGG 0.575677 3.3:+73349419 MS.gene75427:CDS
ATCACGAGCTCCTCATCCGT+TGG 0.576098 3.3:-73348268 None:intergenic
AATATCCAGACCCAGCCGCC+CGG 0.582754 3.3:-73348626 None:intergenic
TATGATCCTTGGGACCTCCC+AGG 0.585959 3.3:+73348364 MS.gene75427:CDS
AGATCAATTTCAGCGATGAT+CGG 0.587191 3.3:-73348334 None:intergenic
CGAGACAGAAAGTACCCAAA+CGG 0.588955 3.3:+73348591 MS.gene75427:CDS
TACATGAACATATCTTGCAA+TGG 0.597049 3.3:-73349708 None:intergenic
GTTGGATGGAATCTGAAGCC+CGG 0.600613 3.3:-73348250 None:intergenic
TGGATATTGGAAGGCAACCG+GGG 0.604916 3.3:+73348641 MS.gene75427:CDS
ATAGGTCACCCTAAACCGGT+TGG 0.608554 3.3:+73348675 MS.gene75427:CDS
GTTTGCGGCGGAGGATGTGG+CGG 0.614306 3.3:-73349468 None:intergenic
TCCGAGCTTCAATTACCACC+GGG 0.623307 3.3:+73348232 MS.gene75427:CDS
TGAATTTCCTTATAATTACG+TGG 0.635048 3.3:+73349644 MS.gene75427:CDS
AAGCCGGAGATCGTGACACG+TGG 0.637296 3.3:+73349435 MS.gene75427:CDS
TTCGAGCTGTTCGGAGCACG+TGG 0.644987 3.3:+73349557 MS.gene75427:CDS
ATTCCAGCCGTAGTTTGCGG+CGG 0.647744 3.3:-73349480 None:intergenic
GGGCTTCAGATTCCATCCAA+CGG 0.653227 3.3:+73348252 MS.gene75427:CDS
CCGGAGATCGTGACACGTGG+AGG 0.654065 3.3:+73349438 MS.gene75427:CDS
GGCTGGGTCTGGATATTGGA+AGG 0.659634 3.3:+73348632 MS.gene75427:CDS
ATTGAGAAACAACCAAGCAA+CGG 0.677131 3.3:+73349369 MS.gene75427:CDS
AATTTCAGCGATGATCGGAA+CGG 0.679262 3.3:-73348329 None:intergenic
CGGTTCAAGGCCGAACCGGG+CGG 0.700064 3.3:+73348611 MS.gene75427:CDS
ATCCATGTGATTTACCTGGG+AGG 0.702963 3.3:-73348378 None:intergenic
ATATTGGAAGGCAACCGGGG+CGG 0.704098 3.3:+73348644 MS.gene75427:CDS
GGATGGAATCTGAAGCCCGG+TGG 0.713450 3.3:-73348247 None:intergenic
GCCAAAACCAGTGTTCAGGG+TGG 0.722298 3.3:-73349670 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGATAAATAAATTCTATAAA+TGG - chr3.3:73349185-73349204 None:intergenic 10.0%
!!! CTTTTATTATGTTAAATATT+TGG + chr3.3:73349248-73349267 MS.gene75427:intron 10.0%
!!! TTGATATTATGTTATTTTAT+AGG + chr3.3:73348525-73348544 MS.gene75427:intron 10.0%
!! AAAACATGAAATTGATTAAA+TGG + chr3.3:73349287-73349306 MS.gene75427:intron 15.0%
!!! ATTATGTTATTTTATAGGTA+TGG + chr3.3:73348530-73348549 MS.gene75427:intron 15.0%
!!! CTTAATTCTAAAAATTAGAA+GGG - chr3.3:73348848-73348867 None:intergenic 15.0%
!!! TCTTAATTCTAAAAATTAGA+AGG - chr3.3:73348849-73348868 None:intergenic 15.0%
!! AATAATACTTAATAAGTGGT+TGG - chr3.3:73349160-73349179 None:intergenic 20.0%
!! ATCTATATAAATATGATCCT+TGG + chr3.3:73348353-73348372 MS.gene75427:CDS 20.0%
!! GGAAAATAATACTTAATAAG+TGG - chr3.3:73349164-73349183 None:intergenic 20.0%
!! TCTATATAAATATGATCCTT+GGG + chr3.3:73348354-73348373 MS.gene75427:CDS 20.0%
!!! AGTTTGACTTGAATTTTATT+AGG + chr3.3:73349211-73349230 MS.gene75427:intron 20.0%
!!! ATCAATTTCATGTTTTTCTA+AGG - chr3.3:73349283-73349302 None:intergenic 20.0%
! CGTAATTATAAGGAAATTCA+AGG - chr3.3:73349644-73349663 None:intergenic 25.0%
! TGAATTTCCTTATAATTACG+TGG + chr3.3:73349644-73349663 MS.gene75427:CDS 25.0%
!! GATGTTACTATTCTTCATTT+TGG - chr3.3:73349093-73349112 None:intergenic 25.0%
!! TTTGTTGAAAACTACCATTT+TGG + chr3.3:73348885-73348904 MS.gene75427:intron 25.0%
!!! TTTCAGAATGTTCTGTTTTT+CGG - chr3.3:73349404-73349423 None:intergenic 25.0%
ATTGGTCCAAATTAAAAGAC+AGG - chr3.3:73348922-73348941 None:intergenic 30.0%
ATTTGGACCAATCAATGATT+TGG + chr3.3:73348930-73348949 MS.gene75427:intron 30.0%
CTAAAGGTGATAAAACCAAT+TGG + chr3.3:73348736-73348755 MS.gene75427:CDS 30.0%
CTCTTGATTGATATACTTTG+TGG + chr3.3:73349024-73349043 MS.gene75427:intron 30.0%
GTGATGTGATGTTAATACTT+AGG - chr3.3:73349063-73349082 None:intergenic 30.0%
TACATGAACATATCTTGCAA+TGG - chr3.3:73349711-73349730 None:intergenic 30.0%
TTGGTCCAAATTAAAAGACA+GGG - chr3.3:73348921-73348940 None:intergenic 30.0%
TTTATAGGTATGGCTTCTTA+TGG + chr3.3:73348540-73348559 MS.gene75427:intron 30.0%
! GATTTTACAGTTGGATGATT+GGG + chr3.3:73349314-73349333 MS.gene75427:intron 30.0%
! TGATTTTACAGTTGGATGAT+TGG + chr3.3:73349313-73349332 MS.gene75427:intron 30.0%
!! TATACTTTGTGGCTGATTTT+CGG + chr3.3:73349035-73349054 MS.gene75427:intron 30.0%
!!! AATGGTTCTGATTTTACAGT+TGG + chr3.3:73349305-73349324 MS.gene75427:intron 30.0%
!!! CAATTGGTTTTATCACCTTT+AGG - chr3.3:73348738-73348757 None:intergenic 30.0%
!!! CTTGCAATGGATTAGTATTT+TGG - chr3.3:73349698-73349717 None:intergenic 30.0%
AAAGCTTTCTTGATTCCAAC+CGG - chr3.3:73348693-73348712 None:intergenic 35.0%
AATGATCCATGTGATTTACC+TGG - chr3.3:73348385-73348404 None:intergenic 35.0%
AGATCAATTTCAGCGATGAT+CGG - chr3.3:73348337-73348356 None:intergenic 35.0%
ATGATCCATGTGATTTACCT+GGG - chr3.3:73348384-73348403 None:intergenic 35.0%
ATTGAGAAACAACCAAGCAA+CGG + chr3.3:73349369-73349388 MS.gene75427:CDS 35.0%
CAAGAGTTATCAACTAGTGA+AGG - chr3.3:73349010-73349029 None:intergenic 35.0%
CTTCTTATGGAGAAAAGGAA+TGG + chr3.3:73348553-73348572 MS.gene75427:CDS 35.0%
GCTTCAACCAAATCATTGAT+TGG - chr3.3:73348940-73348959 None:intergenic 35.0%
TATGGCTTCTTATGGAGAAA+AGG + chr3.3:73348548-73348567 MS.gene75427:CDS 35.0%
TATGTGTGATAACTACACCA+AGG + chr3.3:73348982-73349001 MS.gene75427:intron 35.0%
TCGCAAAAAGAACAGCTTAA+GGG + chr3.3:73348800-73348819 MS.gene75427:CDS 35.0%
TGCCGTATTTACAACAAGAA+GGG + chr3.3:73349342-73349361 MS.gene75427:CDS 35.0%
TGGTCCAAATTAAAAGACAG+GGG - chr3.3:73348920-73348939 None:intergenic 35.0%
TTCGCAAAAAGAACAGCTTA+AGG + chr3.3:73348799-73348818 MS.gene75427:CDS 35.0%
TTGCCGTATTTACAACAAGA+AGG + chr3.3:73349341-73349360 MS.gene75427:CDS 35.0%
! TAAGCTGTTCTTTTTGCGAA+TGG - chr3.3:73348799-73348818 None:intergenic 35.0%
! TGCCCTTCTTGTTGTAAATA+CGG - chr3.3:73349347-73349366 None:intergenic 35.0%
!! AACATTCTGAAATCGAAGAC+AGG + chr3.3:73349412-73349431 MS.gene75427:CDS 35.0%
!! TGATTTGGTTGAAGCAAATG+CGG + chr3.3:73348945-73348964 MS.gene75427:intron 35.0%
AATTTCAGCGATGATCGGAA+CGG - chr3.3:73348332-73348351 None:intergenic 40.0%
ATACTCGTGCATGATCCAAT+TGG - chr3.3:73348754-73348773 None:intergenic 40.0%
ATCAACTAGTGAAGGTTCCT+TGG - chr3.3:73349002-73349021 None:intergenic 40.0%
GGTTGGAATCAAGAAAGCTT+TGG + chr3.3:73348692-73348711 MS.gene75427:CDS 40.0%
GTGGCATCCACGTAATTATA+AGG - chr3.3:73349654-73349673 None:intergenic 40.0%
TGAGCCTAAGTGGAATGAAT+GGG + chr3.3:73349611-73349630 MS.gene75427:CDS 40.0%
TTCTCCCATTCATTCCACTT+AGG - chr3.3:73349618-73349637 None:intergenic 40.0%
! TCTTGATTCCAACCGGTTTA+GGG - chr3.3:73348686-73348705 None:intergenic 40.0%
! TTCTTGATTCCAACCGGTTT+AGG - chr3.3:73348687-73348706 None:intergenic 40.0%
!! AAAACTACCATTTTGGCCCT+TGG + chr3.3:73348892-73348911 MS.gene75427:intron 40.0%
!! AAACTACCATTTTGGCCCTT+GGG + chr3.3:73348893-73348912 MS.gene75427:intron 40.0%
!!! AAAGCTTTGGTGTTTTACGC+GGG + chr3.3:73348705-73348724 MS.gene75427:CDS 40.0%
!!! GAAAGCTTTGGTGTTTTACG+CGG + chr3.3:73348704-73348723 MS.gene75427:CDS 40.0%
ACCAATAGGTCACCCTAAAC+CGG + chr3.3:73348671-73348690 MS.gene75427:CDS 45.0%
ATCCATGTGATTTACCTGGG+AGG - chr3.3:73348381-73348400 None:intergenic 45.0%
ATCCGAGCTTCAATTACCAC+CGG + chr3.3:73348231-73348250 MS.gene75427:CDS 45.0%
ATTAAAAGACAGGGGACCCA+AGG - chr3.3:73348912-73348931 None:intergenic 45.0%
CTAATTCCAGCCGTAGTTTG+CGG - chr3.3:73349486-73349505 None:intergenic 45.0%
GAAGCCAAAACCAGTGTTCA+GGG - chr3.3:73349676-73349695 None:intergenic 45.0%
GCAAACTACGGCTGGAATTA+GGG + chr3.3:73349485-73349504 MS.gene75427:CDS 45.0%
GTGAGCCTAAGTGGAATGAA+TGG + chr3.3:73349610-73349629 MS.gene75427:CDS 45.0%
TCTGGATATTGGAAGGCAAC+CGG + chr3.3:73348639-73348658 MS.gene75427:CDS 45.0%
TGAAATCGAAGACAGGAAGC+CGG + chr3.3:73349419-73349438 MS.gene75427:CDS 45.0%
TTAAAAGACAGGGGACCCAA+GGG - chr3.3:73348911-73348930 None:intergenic 45.0%
TTTGGGTACTTTCTGTCTCG+TGG - chr3.3:73348591-73348610 None:intergenic 45.0%
! GATCATGCACGAGTATCGTT+TGG + chr3.3:73348758-73348777 MS.gene75427:CDS 45.0%
!! CGAGACAGAAAGTACCCAAA+CGG + chr3.3:73348591-73348610 MS.gene75427:CDS 45.0%
!! GAAAGTACCCAAACGGTTCA+AGG + chr3.3:73348598-73348617 MS.gene75427:CDS 45.0%
!! GGGTCCCCTGTCTTTTAATT+TGG + chr3.3:73348913-73348932 MS.gene75427:intron 45.0%
ATAGGTCACCCTAAACCGGT+TGG + chr3.3:73348675-73348694 MS.gene75427:CDS 50.0%
ATCACCGGAGTTTGCAAGTG+AGG + chr3.3:73349581-73349600 MS.gene75427:CDS 50.0%
CAGATTCCATCCAACGGATG+AGG + chr3.3:73348258-73348277 MS.gene75427:CDS 50.0%
CGCAAACTACGGCTGGAATT+AGG + chr3.3:73349484-73349503 MS.gene75427:CDS 50.0%
CGGTTAACAACACCGTTGCT+TGG - chr3.3:73349384-73349403 None:intergenic 50.0%
CTGGATATTGGAAGGCAACC+GGG + chr3.3:73348640-73348659 MS.gene75427:CDS 50.0%
GACCTCCCAGGTAAATCACA+TGG + chr3.3:73348376-73348395 MS.gene75427:intron 50.0%
GGAAGCCAAAACCAGTGTTC+AGG - chr3.3:73349677-73349696 None:intergenic 50.0%
GGGCTTCAGATTCCATCCAA+CGG + chr3.3:73348252-73348271 MS.gene75427:CDS 50.0%
TCCGAGCTTCAATTACCACC+GGG + chr3.3:73348232-73348251 MS.gene75427:CDS 50.0%
TGCACCTCACTTGCAAACTC+CGG - chr3.3:73349588-73349607 None:intergenic 50.0%
TGGATATTGGAAGGCAACCG+GGG + chr3.3:73348641-73348660 MS.gene75427:CDS 50.0%
! ACCGGTTTAGGGTGACCTAT+TGG - chr3.3:73348675-73348694 None:intergenic 50.0%
! GTTGGATGGAATCTGAAGCC+CGG - chr3.3:73348253-73348272 None:intergenic 50.0%
! TACGCGGGTAAAGCACCTAA+AGG + chr3.3:73348720-73348739 MS.gene75427:CDS 50.0%
!! ACCTATTGGTTTATCCGCCC+CGG - chr3.3:73348661-73348680 None:intergenic 50.0%
AAACGGTTCAAGGCCGAACC+GGG + chr3.3:73348608-73348627 MS.gene75427:CDS 55.0%
ACATCCTCCGCCGCAAACTA+CGG + chr3.3:73349473-73349492 MS.gene75427:CDS 55.0%
ACCGGGGCGGATAAACCAAT+AGG + chr3.3:73348657-73348676 MS.gene75427:CDS 55.0%
AGGTGCAGAGTGAGCCTAAG+TGG + chr3.3:73349601-73349620 MS.gene75427:CDS 55.0%
ATATTGGAAGGCAACCGGGG+CGG + chr3.3:73348644-73348663 MS.gene75427:CDS 55.0%
ATCACGAGCTCCTCATCCGT+TGG - chr3.3:73348271-73348290 None:intergenic 55.0%
CAAACGGTTCAAGGCCGAAC+CGG + chr3.3:73348607-73348626 MS.gene75427:CDS 55.0%
CTCGAATCGGTGTGCAGCTT+AGG - chr3.3:73349543-73349562 None:intergenic 55.0%
GATTTACCTGGGAGGTCCCA+AGG - chr3.3:73348373-73348392 None:intergenic 55.0%
GCCAAAACCAGTGTTCAGGG+TGG - chr3.3:73349673-73349692 None:intergenic 55.0%
GCCCGGTGGTAATTGAAGCT+CGG - chr3.3:73348236-73348255 None:intergenic 55.0%
GGCTGGGTCTGGATATTGGA+AGG + chr3.3:73348632-73348651 MS.gene75427:CDS 55.0%
GGTTCGGCCTTGAACCGTTT+GGG - chr3.3:73348608-73348627 None:intergenic 55.0%
GTGCTCCGAACAGCTCGAAT+CGG - chr3.3:73349556-73349575 None:intergenic 55.0%
TAGGCTGCGACGTGCATTTG+CGG - chr3.3:73348306-73348325 None:intergenic 55.0%
TATGATCCTTGGGACCTCCC+AGG + chr3.3:73348364-73348383 MS.gene75427:CDS 55.0%
TTCGGAGCACGTGGTATCAC+CGG + chr3.3:73349566-73349585 MS.gene75427:CDS 55.0%
! ATTCCAGCCGTAGTTTGCGG+CGG - chr3.3:73349483-73349502 None:intergenic 55.0%
!! GCACACCGATTCGAGCTGTT+CGG + chr3.3:73349548-73349567 MS.gene75427:CDS 55.0%
!!! GCCACCCTGAACACTGGTTT+TGG + chr3.3:73349669-73349688 MS.gene75427:CDS 55.0%
AAGCCGGAGATCGTGACACG+TGG + chr3.3:73349435-73349454 MS.gene75427:CDS 60.0%
AATATCCAGACCCAGCCGCC+CGG - chr3.3:73348629-73348648 None:intergenic 60.0%
AGGGGACCCAAGGGCCAAAA+TGG - chr3.3:73348902-73348921 None:intergenic 60.0%
CCTCCACGTGTCACGATCTC+CGG - chr3.3:73349441-73349460 None:intergenic 60.0%
CGAGCTCCTCATCCGTTGGA+TGG - chr3.3:73348267-73348286 None:intergenic 60.0%
GAGATCGTGACACGTGGAGG+TGG + chr3.3:73349441-73349460 MS.gene75427:CDS 60.0%
GCGATGATCGGAACGGCGAT+AGG - chr3.3:73348325-73348344 None:intergenic 60.0%
GTGGATGCCACCCTGAACAC+TGG + chr3.3:73349663-73349682 MS.gene75427:CDS 60.0%
TTCGAGCTGTTCGGAGCACG+TGG + chr3.3:73349557-73349576 MS.gene75427:CDS 60.0%
! CGGTTCGGCCTTGAACCGTT+TGG - chr3.3:73348609-73348628 None:intergenic 60.0%
! GGATGGAATCTGAAGCCCGG+TGG - chr3.3:73348250-73348269 None:intergenic 60.0%
! GTAGTTTGCGGCGGAGGATG+TGG - chr3.3:73349474-73349493 None:intergenic 60.0%
CCGGAGATCGTGACACGTGG+AGG + chr3.3:73349438-73349457 MS.gene75427:CDS 65.0%
GGGCGGCTGGGTCTGGATAT+TGG + chr3.3:73348628-73348647 MS.gene75427:CDS 65.0%
GTTTGCGGCGGAGGATGTGG+CGG - chr3.3:73349471-73349490 None:intergenic 65.0%
CCTCCGCCGCAAACTACGGC+TGG + chr3.3:73349477-73349496 MS.gene75427:CDS 70.0%
CGGTTCAAGGCCGAACCGGG+CGG + chr3.3:73348611-73348630 MS.gene75427:CDS 70.0%
! CCAGCCGTAGTTTGCGGCGG+AGG - chr3.3:73349480-73349499 None:intergenic 70.0%
CAAGGCCGAACCGGGCGGCT+GGG + chr3.3:73348616-73348635 MS.gene75427:CDS 75.0%
CCAGACCCAGCCGCCCGGTT+CGG - chr3.3:73348624-73348643 None:intergenic 75.0%
TCAAGGCCGAACCGGGCGGC+TGG + chr3.3:73348615-73348634 MS.gene75427:CDS 75.0%
! CCGAACCGGGCGGCTGGGTC+TGG + chr3.3:73348621-73348640 MS.gene75427:CDS 80.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 73348226 73349749 73348226 ID=MS.gene75427
chr3.3 mRNA 73348226 73349749 73348226 ID=MS.gene75427.t1;Parent=MS.gene75427
chr3.3 exon 73348226 73348385 73348226 ID=MS.gene75427.t1.exon1;Parent=MS.gene75427.t1
chr3.3 CDS 73348226 73348385 73348226 ID=cds.MS.gene75427.t1;Parent=MS.gene75427.t1
chr3.3 exon 73348547 73348821 73348547 ID=MS.gene75427.t1.exon2;Parent=MS.gene75427.t1
chr3.3 CDS 73348547 73348821 73348547 ID=cds.MS.gene75427.t1;Parent=MS.gene75427.t1
chr3.3 exon 73349324 73349749 73349324 ID=MS.gene75427.t1.exon3;Parent=MS.gene75427.t1
chr3.3 CDS 73349324 73349749 73349324 ID=cds.MS.gene75427.t1;Parent=MS.gene75427.t1
Gene Sequence

>MS.gene75427

ATGGCATCCGAGCTTCAATTACCACCGGGCTTCAGATTCCATCCAACGGATGAGGAGCTCGTGATGCACTATCTCTGCCGCAAATGCACGTCGCAGCCTATCGCCGTTCCGATCATCGCTGAAATTGATCTATATAAATATGATCCTTGGGACCTCCCAGGTAAATCACATGGATCATTGTAATTACTTTTTTGTAGCTTGTAAATTTTATTTTGACATATGTACAGTGATATCAAACAAAAGCTTGATCTTTTTGTATAACTATTGTATTTTCAATTAAATATAAAATTTTAATTTTATTGATATTATGTTATTTTATAGGTATGGCTTCTTATGGAGAAAAGGAATGGTACTTTTTCTCGCCACGAGACAGAAAGTACCCAAACGGTTCAAGGCCGAACCGGGCGGCTGGGTCTGGATATTGGAAGGCAACCGGGGCGGATAAACCAATAGGTCACCCTAAACCGGTTGGAATCAAGAAAGCTTTGGTGTTTTACGCGGGTAAAGCACCTAAAGGTGATAAAACCAATTGGATCATGCACGAGTATCGTTTGGCTGATGTAGATCGCACCATTCGCAAAAAGAACAGCTTAAGGGTATAAATAAATATTCGCATTTACCCTTCTAATTTTTAGAATTAAGATCAAAGTTTTGTGATATTTGTTGAAAACTACCATTTTGGCCCTTGGGTCCCCTGTCTTTTAATTTGGACCAATCAATGATTTGGTTGAAGCAAATGCGGTTACACTTTTTTATTATGTGTGATAACTACACCAAGGAACCTTCACTAGTTGATAACTCTTGATTGATATACTTTGTGGCTGATTTTCGGATCCTAAGTATTAACATCACATCACATTATTTCCAAAATGAAGAATAGTAACATCACATTAAATCAGACAATTAATGAGATAATATTGAAAGTCATCTGCCAACCACTTATTAAGTATTATTTTCCATTTATAGAATTTATTTATCTGTTTGAAGTTTGACTTGAATTTTATTAGGAAATAGTATTTAGTCTTTTATTATGTTAAATATTTGGATTTATTTTCCTTAGAAAAACATGAAATTGATTAAATGGTTCTGATTTTACAGTTGGATGATTGGGTGCTTTGCCGTATTTACAACAAGAAGGGCACAATTGAGAAACAACCAAGCAACGGTGTTGTTAACCGAAAAACAGAACATTCTGAAATCGAAGACAGGAAGCCGGAGATCGTGACACGTGGAGGTGGTCTTCCGCCACATCCTCCGCCGCAAACTACGGCTGGAATTAGGGATTACATGTACTTTGACACATCAGATTCGATTCCTAAGCTGCACACCGATTCGAGCTGTTCGGAGCACGTGGTATCACCGGAGTTTGCAAGTGAGGTGCAGAGTGAGCCTAAGTGGAATGAATGGGAGAAGAACCTTGAATTTCCTTATAATTACGTGGATGCCACCCTGAACACTGGTTTTGGCTTCCAAAATACTAATCCATTGCAAGATATGTTCATGTACTTGCCCAAAACCTTTTGA
Protein sequence

>MS.gene75427.t1

MASELQLPPGFRFHPTDEELVMHYLCRKCTSQPIAVPIIAEIDLYKYDPWDLPGMASYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGHPKPVGIKKALVFYAGKAPKGDKTNWIMHEYRLADVDRTIRKKNSLRLDDWVLCRIYNKKGTIEKQPSNGVVNRKTEHSEIEDRKPEIVTRGGGLPPHPPPQTTAGIRDYMYFDTSDSIPKLHTDSSCSEHVVSPEFASEVQSEPKWNEWEKNLEFPYNYVDATLNTGFGFQNTNPLQDMFMYLPKTF