AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene75752

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75752.t1 MTR_4g035590 98.870 354 3 1 1 353 1 354 0.0 735
MS.gene75752.t1 MTR_2g062730 79.739 153 29 2 8 158 10 162 2.80e-88 269
MS.gene75752.t1 MTR_8g024480 73.494 166 32 1 8 161 15 180 2.07e-87 270
MS.gene75752.t1 MTR_5g021710 72.956 159 42 1 1 158 1 159 2.05e-84 259
MS.gene75752.t1 MTR_8g076110 66.102 177 57 2 8 181 6 182 1.08e-80 249
MS.gene75752.t1 MTR_4g101680 75.497 151 36 1 8 157 7 157 1.51e-80 250
MS.gene75752.t1 MTR_4g036030 73.510 151 39 1 8 157 7 157 1.74e-80 249
MS.gene75752.t1 MTR_5g012080 45.541 314 138 7 8 317 7 291 5.83e-78 243
MS.gene75752.t1 MTR_1g096430 58.883 197 73 4 8 196 7 203 7.10e-74 232
MS.gene75752.t1 MTR_6g477900 57.051 156 63 2 7 159 5 159 8.91e-60 192
MS.gene75752.t1 MTR_2g078700 58.385 161 57 3 5 158 20 177 6.67e-59 195
MS.gene75752.t1 MTR_3g435150 61.688 154 51 3 8 156 16 166 1.17e-58 192
MS.gene75752.t1 MTR_2g064090 55.556 153 63 2 8 156 6 157 1.59e-58 193
MS.gene75752.t1 MTR_6g084430 60.000 150 56 2 8 156 5 151 1.78e-58 192
MS.gene75752.t1 MTR_4g108760 57.143 168 58 3 8 170 17 175 3.19e-58 192
MS.gene75752.t1 MTR_3g109340 57.895 152 58 3 8 156 22 170 4.22e-57 189
MS.gene75752.t1 MTR_5g076850 51.124 178 76 5 7 176 5 179 5.29e-57 196
MS.gene75752.t1 MTR_1g008740 59.740 154 54 4 8 156 13 163 1.03e-56 188
MS.gene75752.t1 MTR_1g008740 59.740 154 54 4 8 156 27 177 1.25e-56 188
MS.gene75752.t1 MTR_3g070030 59.119 159 56 3 9 161 20 175 5.44e-56 186
MS.gene75752.t1 MTR_4g081870 41.877 277 134 10 2 264 3 266 6.04e-56 184
MS.gene75752.t1 MTR_3g064580 49.198 187 86 5 7 187 5 188 7.31e-56 193
MS.gene75752.t1 MTR_3g109340 56.209 153 60 3 8 156 22 171 1.30e-55 186
MS.gene75752.t1 MTR_7g085260 60.127 158 51 4 8 156 17 171 1.37e-55 186
MS.gene75752.t1 MTR_6g012670 57.233 159 60 2 8 161 20 175 1.80e-55 184
MS.gene75752.t1 MTR_7g085220 47.027 185 79 3 1 169 1 182 1.03e-54 183
MS.gene75752.t1 MTR_5g041940 54.037 161 64 2 8 161 3 160 1.15e-54 180
MS.gene75752.t1 MTR_2g079990 55.263 152 62 2 8 156 16 164 3.14e-54 182
MS.gene75752.t1 MTR_1g069805 54.902 153 63 3 6 156 8 156 9.46e-54 178
MS.gene75752.t1 MTR_2g080010 40.800 250 105 7 8 219 15 259 2.93e-53 179
MS.gene75752.t1 MTR_2g064470 40.400 250 125 7 1 244 4 235 3.51e-53 178
MS.gene75752.t1 MTR_7g011130 51.031 194 68 5 11 181 22 211 6.18e-53 178
MS.gene75752.t1 MTR_6g032770 53.459 159 64 4 8 159 18 173 1.22e-52 178
MS.gene75752.t1 MTR_3g116070 49.754 203 85 8 7 200 22 216 1.48e-52 177
MS.gene75752.t1 MTR_7g097090 54.967 151 62 3 6 154 8 154 1.87e-52 175
MS.gene75752.t1 MTR_8g059170 53.896 154 63 2 8 156 14 164 4.54e-52 176
MS.gene75752.t1 MTR_7g005280 56.494 154 56 4 8 157 15 161 6.93e-52 173
MS.gene75752.t1 MTR_5g014300 39.600 250 140 4 6 248 4 249 1.20e-51 174
MS.gene75752.t1 MTR_2157s0010 48.538 171 70 3 1 156 1 168 4.44e-51 171
MS.gene75752.t1 MTR_3g088110 51.553 161 68 3 3 157 2 158 8.01e-51 171
MS.gene75752.t1 MTR_7g011120 55.901 161 56 3 10 158 10 167 9.76e-51 171
MS.gene75752.t1 MTR_3g096920 52.564 156 64 3 8 157 7 158 2.01e-50 170
MS.gene75752.t1 MTR_6g011860 50.617 162 64 4 10 158 17 175 2.02e-49 170
MS.gene75752.t1 MTR_8g467490 45.503 189 81 5 10 183 16 197 2.91e-49 170
MS.gene75752.t1 MTR_8g094580 50.318 157 67 3 8 157 7 159 9.94e-49 166
MS.gene75752.t1 MTR_5g040420 49.390 164 67 3 8 158 14 174 1.21e-48 168
MS.gene75752.t1 MTR_1g090720 52.201 159 66 3 10 159 44 201 1.27e-48 170
MS.gene75752.t1 MTR_4g089135 46.927 179 64 5 8 158 15 190 1.80e-48 167
MS.gene75752.t1 MTR_3g096140 50.331 151 71 2 10 157 9 158 2.31e-48 164
MS.gene75752.t1 MTR_4g098630 51.572 159 66 4 6 156 4 159 2.60e-48 166
MS.gene75752.t1 MTR_2g079990 45.556 180 64 2 8 156 16 192 2.64e-48 167
MS.gene75752.t1 MTR_5g069030 53.548 155 66 3 8 158 25 177 4.09e-48 172
MS.gene75752.t1 MTR_7g100990 50.633 158 66 3 8 156 11 165 9.47e-48 164
MS.gene75752.t1 MTR_3g096140 50.331 151 71 2 10 157 9 158 1.62e-47 164
MS.gene75752.t1 MTR_2g093810 50.000 164 70 3 2 156 8 168 3.14e-47 163
MS.gene75752.t1 MTR_3g093040 50.323 155 71 4 8 158 108 260 4.00e-47 162
MS.gene75752.t1 MTR_8g063550 50.000 154 67 3 10 157 8 157 1.17e-46 162
MS.gene75752.t1 MTR_3g093050 50.641 156 71 3 7 158 21 174 2.08e-46 166
MS.gene75752.t1 MTR_3g093050 50.314 159 73 3 4 158 18 174 2.47e-46 167
MS.gene75752.t1 MTR_8g063550 50.000 154 67 3 10 157 8 157 4.53e-46 163
MS.gene75752.t1 MTR_8g063550 50.000 154 67 3 10 157 8 157 5.44e-46 162
MS.gene75752.t1 MTR_3g096920 57.252 131 52 2 8 138 7 133 9.48e-46 159
MS.gene75752.t1 MTR_0036s0150 50.000 150 71 3 10 156 7 155 1.27e-45 163
MS.gene75752.t1 MTR_2g086880 45.856 181 89 4 1 181 11 182 2.36e-45 162
MS.gene75752.t1 MTR_2g086880 45.856 181 89 4 1 181 11 182 2.75e-45 163
MS.gene75752.t1 MTR_3g070040 51.497 167 64 4 12 170 12 169 3.18e-45 158
MS.gene75752.t1 MTR_1g090723 49.007 151 72 3 10 156 10 159 6.63e-45 163
MS.gene75752.t1 MTR_8g093580 49.351 154 68 3 10 157 8 157 1.00e-44 160
MS.gene75752.t1 MTR_1g090723 49.333 150 72 3 10 156 10 158 1.20e-44 162
MS.gene75752.t1 MTR_1g097300 49.333 150 72 2 10 156 21 169 1.21e-44 161
MS.gene75752.t1 MTR_1g090723 49.007 151 73 3 10 157 10 159 1.45e-44 162
MS.gene75752.t1 MTR_4g134460 46.753 154 77 3 8 159 54 204 3.39e-44 157
MS.gene75752.t1 MTR_5g090970 34.091 264 126 7 8 228 18 276 5.47e-43 151
MS.gene75752.t1 MTR_4g075980 46.471 170 83 4 10 176 17 181 9.08e-43 150
MS.gene75752.t1 MTR_5g090970 33.712 264 126 7 8 228 18 275 1.16e-41 148
MS.gene75752.t1 MTR_2g068880 34.137 249 131 8 8 227 21 265 4.19e-40 144
MS.gene75752.t1 MTR_2g068920 36.283 226 107 8 8 204 20 237 1.55e-39 142
MS.gene75752.t1 MTR_8g099750 44.134 179 82 6 8 176 14 184 5.53e-39 138
MS.gene75752.t1 MTR_3g096140 47.445 137 68 2 24 157 2 137 2.53e-38 140
MS.gene75752.t1 MTR_3g098810 42.945 163 75 4 8 157 14 171 5.52e-36 131
MS.gene75752.t1 MTR_8g023840 47.368 152 73 5 5 153 8 155 2.95e-35 133
MS.gene75752.t1 MTR_3g098810 45.865 133 63 2 8 136 14 141 6.79e-33 120
MS.gene75752.t1 MTR_2g086690 41.071 168 83 6 6 160 2 166 2.34e-32 121
MS.gene75752.t1 MTR_8g023860 46.711 152 68 6 8 153 12 156 4.76e-32 124
MS.gene75752.t1 MTR_8g023900 43.590 156 81 5 8 159 12 164 1.98e-30 120
MS.gene75752.t1 MTR_8g023900 45.395 152 70 6 11 156 196 340 1.07e-28 116
MS.gene75752.t1 MTR_4g052620 38.788 165 86 5 9 161 6 167 5.60e-30 115
MS.gene75752.t1 MTR_8g094580 53.465 101 39 2 64 157 6 105 5.62e-30 115
MS.gene75752.t1 MTR_8g023930 44.737 152 77 5 8 156 24 171 1.08e-29 119
MS.gene75752.t1 MTR_4g094302 36.875 160 79 4 8 156 11 159 2.14e-28 109
MS.gene75752.t1 MTR_4g094302 40.458 131 65 3 8 136 11 130 7.13e-27 104
MS.gene75752.t1 MTR_8g023880 35.354 198 103 7 4 184 3 192 3.85e-25 102
MS.gene75752.t1 MTR_7g105170 34.940 166 96 4 8 161 4 169 1.18e-24 101
MS.gene75752.t1 MTR_7g070140 58.667 75 29 1 64 136 17 91 1.98e-24 97.4
MS.gene75752.t1 MTR_8g093790 35.593 177 92 7 2 178 4 158 7.42e-24 97.4
MS.gene75752.t1 MTR_3g096400 31.953 169 90 6 8 160 7 166 9.32e-18 81.3
MS.gene75752.t1 MTR_7g070150 59.259 54 20 2 104 156 5 57 1.40e-16 74.7
MS.gene75752.t1 MTR_7g083360 31.013 158 102 6 1 155 1 154 1.09e-14 71.2
MS.gene75752.t1 MTR_7g083330 31.884 138 87 6 1 136 11 143 7.77e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75752.t1 AT4G10350 59.840 376 89 13 2 352 3 341 5.92e-143 408
MS.gene75752.t1 AT1G33280 56.389 360 89 11 1 349 1 303 3.94e-127 367
MS.gene75752.t1 AT4G10350 54.769 325 85 13 53 352 7 294 2.83e-103 306
MS.gene75752.t1 AT1G79580 79.355 155 31 1 8 161 17 171 8.14e-89 271
MS.gene75752.t1 AT1G79580 79.355 155 31 1 8 161 17 171 8.14e-89 271
MS.gene75752.t1 AT1G79580 79.355 155 31 1 8 161 17 171 8.14e-89 271
MS.gene75752.t1 AT1G79580 79.355 155 31 1 8 161 17 171 8.14e-89 271
MS.gene75752.t1 AT1G79580 79.355 155 31 1 8 161 17 171 8.14e-89 271
MS.gene75752.t1 AT1G32770 73.810 168 31 2 8 162 16 183 2.12e-87 268
MS.gene75752.t1 AT2G46770 68.824 170 37 1 8 161 16 185 2.11e-84 260
MS.gene75752.t1 AT4G36160 76.159 151 35 1 8 157 10 160 1.76e-82 256
MS.gene75752.t1 AT4G36160 76.159 151 35 1 8 157 10 160 1.76e-82 256
MS.gene75752.t1 AT4G36160 75.658 152 36 1 7 157 13 164 1.92e-82 256
MS.gene75752.t1 AT2G18060 73.684 152 39 1 7 157 8 159 1.38e-81 253
MS.gene75752.t1 AT2G18060 73.684 152 39 1 7 157 8 159 1.38e-81 253
MS.gene75752.t1 AT1G12260 57.021 235 85 7 8 226 7 241 8.99e-81 250
MS.gene75752.t1 AT3G61910 67.647 170 39 2 8 161 11 180 1.83e-80 249
MS.gene75752.t1 AT1G12260 57.082 233 84 7 8 224 7 239 2.10e-79 248
MS.gene75752.t1 AT1G62700 52.713 258 88 7 8 237 7 258 1.58e-78 246
MS.gene75752.t1 AT1G62700 52.713 258 88 7 8 237 7 258 1.58e-78 246
MS.gene75752.t1 AT5G66300 70.130 154 44 2 7 158 11 164 5.44e-77 239
MS.gene75752.t1 AT5G62380 70.199 151 44 1 8 157 7 157 1.14e-75 237
MS.gene75752.t1 AT5G62380 70.199 151 44 1 8 157 7 157 1.14e-75 237
MS.gene75752.t1 AT1G71930 67.105 152 49 1 6 156 7 158 1.69e-74 233
MS.gene75752.t1 AT1G71930 67.105 152 49 1 6 156 7 158 1.69e-74 233
MS.gene75752.t1 AT3G18400 60.256 156 57 2 8 161 5 157 2.47e-62 202
MS.gene75752.t1 AT2G24430 60.377 159 56 3 7 161 15 170 1.07e-61 200
MS.gene75752.t1 AT2G24430 60.377 159 56 3 7 161 15 170 1.07e-61 200
MS.gene75752.t1 AT3G17730 58.333 156 61 3 7 159 5 159 1.10e-61 198
MS.gene75752.t1 AT5G07680 44.765 277 122 9 8 269 3 263 1.18e-61 200
MS.gene75752.t1 AT5G61430 43.972 282 122 10 8 269 16 281 1.79e-61 200
MS.gene75752.t1 AT5G07680 44.765 277 122 9 8 269 17 277 1.81e-61 200
MS.gene75752.t1 AT5G39610 54.255 188 70 5 8 188 20 198 8.97e-59 192
MS.gene75752.t1 AT3G15170 57.500 160 56 4 8 159 20 175 1.33e-56 187
MS.gene75752.t1 AT5G17260 57.143 154 61 3 7 156 5 157 3.11e-56 190
MS.gene75752.t1 AT1G54330 57.237 152 60 2 7 156 5 153 7.47e-56 184
MS.gene75752.t1 AT5G18270 58.599 157 56 4 8 158 21 174 1.08e-55 185
MS.gene75752.t1 AT1G76420 53.977 176 71 4 7 178 21 190 1.10e-55 185
MS.gene75752.t1 AT3G29035 59.868 152 53 2 8 154 24 172 1.51e-55 184
MS.gene75752.t1 AT1G65910 55.484 155 65 2 8 159 6 159 1.55e-55 192
MS.gene75752.t1 AT5G53950 56.098 164 62 3 8 164 17 177 1.88e-55 186
MS.gene75752.t1 AT5G18270 57.962 157 57 4 8 158 21 174 2.03e-55 184
MS.gene75752.t1 AT3G03200 57.143 154 61 3 7 156 5 157 3.28e-55 188
MS.gene75752.t1 AT1G69490 50.000 170 75 2 3 165 4 170 8.93e-55 181
MS.gene75752.t1 AT3G04060 59.615 156 52 5 8 156 20 171 4.68e-54 181
MS.gene75752.t1 AT3G10480 53.704 162 70 2 2 159 21 181 2.47e-53 182
MS.gene75752.t1 AT3G04070 50.000 166 65 3 6 156 8 170 5.98e-53 178
MS.gene75752.t1 AT3G10480 54.037 161 70 2 2 159 21 180 6.64e-53 181
MS.gene75752.t1 AT4G27410 52.597 154 67 2 8 158 14 164 8.91e-53 176
MS.gene75752.t1 AT3G10490 52.469 162 72 2 2 159 21 181 1.06e-52 174
MS.gene75752.t1 AT3G12977 37.329 292 148 10 1 287 11 272 1.11e-52 176
MS.gene75752.t1 AT3G15500 52.288 153 67 2 8 157 14 163 5.32e-52 175
MS.gene75752.t1 AT3G10490 52.469 162 72 2 2 159 21 181 2.02e-51 177
MS.gene75752.t1 AT5G04410 53.947 152 66 2 8 156 9 159 2.55e-51 179
MS.gene75752.t1 AT1G61110 51.515 165 61 3 8 156 16 177 2.79e-51 173
MS.gene75752.t1 AT1G52890 51.948 154 68 2 8 158 14 164 3.81e-51 173
MS.gene75752.t1 AT3G10500 54.605 152 65 3 8 156 9 159 6.95e-51 178
MS.gene75752.t1 AT1G56010 49.693 163 72 3 1 156 12 171 3.17e-50 171
MS.gene75752.t1 AT3G04070 45.604 182 65 3 6 156 8 186 4.72e-50 171
MS.gene75752.t1 AT5G63790 52.532 158 63 4 8 157 60 213 5.64e-50 170
MS.gene75752.t1 AT1G77450 48.795 166 75 3 2 161 4 165 5.76e-50 168
MS.gene75752.t1 AT5G63790 52.532 158 63 4 8 157 50 203 6.04e-50 169
MS.gene75752.t1 AT1G01720 50.955 157 66 3 8 157 7 159 7.92e-50 169
MS.gene75752.t1 AT4G27410 48.810 168 69 4 8 158 14 181 4.50e-49 167
MS.gene75752.t1 AT5G08790 51.899 158 64 4 8 157 7 160 9.06e-49 166
MS.gene75752.t1 AT3G10480 45.361 194 70 2 2 159 21 214 1.12e-48 171
MS.gene75752.t1 AT5G24590 50.000 166 78 3 4 165 9 173 1.66e-48 169
MS.gene75752.t1 AT4G28530 50.595 168 59 5 8 156 10 172 3.73e-48 166
MS.gene75752.t1 AT3G15510 41.667 216 101 5 12 210 21 228 4.91e-48 166
MS.gene75752.t1 AT5G46590 50.955 157 71 3 8 159 6 161 5.28e-48 164
MS.gene75752.t1 AT4G17980 49.686 159 72 3 5 156 3 160 1.14e-47 162
MS.gene75752.t1 AT1G33060 51.299 154 69 3 7 156 23 174 1.30e-47 171
MS.gene75752.t1 AT1G33060 51.299 154 69 3 7 156 23 174 1.44e-47 171
MS.gene75752.t1 AT2G33480 51.656 151 66 2 8 157 15 159 1.48e-47 162
MS.gene75752.t1 AT4G35580 51.634 153 68 3 8 156 9 159 2.92e-47 167
MS.gene75752.t1 AT4G35580 51.634 153 68 3 8 156 9 159 3.37e-47 167
MS.gene75752.t1 AT4G35580 51.634 153 68 3 8 156 9 159 3.46e-47 167
MS.gene75752.t1 AT4G17980 50.641 156 69 3 8 156 6 160 3.66e-47 162
MS.gene75752.t1 AT5G39820 44.944 178 67 4 8 158 20 193 3.93e-47 163
MS.gene75752.t1 AT1G26870 37.050 278 138 8 10 267 18 278 7.75e-47 164
MS.gene75752.t1 AT5G46590 55.970 134 57 2 8 140 6 138 1.11e-46 160
MS.gene75752.t1 AT2G33480 50.327 153 67 2 8 157 15 161 1.17e-46 160
MS.gene75752.t1 AT3G49530 45.810 179 92 4 4 178 9 186 2.53e-46 162
MS.gene75752.t1 AT3G49530 45.810 179 92 4 4 178 9 186 5.48e-46 163
MS.gene75752.t1 AT2G27300 39.303 201 112 4 1 201 7 197 1.37e-45 159
MS.gene75752.t1 AT5G13180 50.000 156 64 4 8 157 14 161 5.32e-45 155
MS.gene75752.t1 AT5G64060 47.097 155 78 2 8 159 6 159 2.35e-44 156
MS.gene75752.t1 AT2G02450 47.682 151 74 3 8 156 51 198 2.95e-44 156
MS.gene75752.t1 AT2G02450 47.682 151 74 3 8 156 51 198 3.81e-44 157
MS.gene75752.t1 AT2G43000 46.358 151 74 3 10 156 20 167 1.09e-43 152
MS.gene75752.t1 AT1G52880 50.307 163 61 4 12 158 21 179 1.83e-43 153
MS.gene75752.t1 AT1G32510 42.347 196 98 5 8 190 6 199 1.03e-42 150
MS.gene75752.t1 AT1G34190 44.667 150 79 2 10 156 18 166 5.07e-42 154
MS.gene75752.t1 AT1G34180 43.333 150 81 2 10 156 18 166 3.46e-41 150
MS.gene75752.t1 AT2G17040 40.625 192 103 5 10 195 8 194 4.08e-41 145
MS.gene75752.t1 AT1G34180 43.333 150 81 2 10 156 18 166 1.08e-40 150
MS.gene75752.t1 AT5G22290 45.333 150 77 2 8 157 21 165 1.22e-40 146
MS.gene75752.t1 AT5G09330 47.368 152 72 3 10 156 8 156 1.27e-40 149
MS.gene75752.t1 AT5G09330 47.368 152 72 3 10 156 8 156 1.27e-40 149
MS.gene75752.t1 AT5G09330 47.368 152 72 3 10 156 8 156 1.27e-40 149
MS.gene75752.t1 AT5G09330 47.368 152 72 3 10 156 8 156 1.27e-40 149
MS.gene75752.t1 AT5G09330 47.368 152 72 3 10 156 8 156 1.27e-40 149
MS.gene75752.t1 AT1G34180 40.994 161 81 3 10 156 18 178 5.59e-40 147
MS.gene75752.t1 AT3G44290 41.566 166 85 4 10 175 16 169 9.54e-40 140
MS.gene75752.t1 AT1G34180 40.994 161 81 3 10 156 18 178 1.60e-39 147
MS.gene75752.t1 AT5G61430 40.708 226 101 9 64 269 6 218 1.85e-39 141
MS.gene75752.t1 AT3G44290 41.566 166 85 4 10 175 16 169 7.32e-39 141
MS.gene75752.t1 AT1G32870 46.626 163 75 4 1 156 3 160 2.75e-38 143
MS.gene75752.t1 AT1G32870 46.626 163 75 4 1 156 3 160 2.90e-38 143
MS.gene75752.t1 AT1G32870 46.626 163 75 4 1 156 39 196 5.04e-38 143
MS.gene75752.t1 AT5G04395 43.275 171 79 4 2 159 22 187 7.15e-38 134
MS.gene75752.t1 AT3G12910 43.713 167 70 5 10 156 23 185 3.03e-37 136
MS.gene75752.t1 AT1G56010 58.763 97 34 1 66 156 8 104 5.09e-35 129
MS.gene75752.t1 AT3G12977 54.630 108 42 3 53 156 10 114 1.56e-34 127
MS.gene75752.t1 AT2G18060 74.286 70 17 1 89 157 2 71 6.31e-30 116
MS.gene75752.t1 AT2G33480 50.000 102 48 1 59 157 3 104 4.26e-28 109
MS.gene75752.t1 AT1G02230 39.196 199 98 8 9 193 4 193 1.57e-26 108
MS.gene75752.t1 AT4G01550 36.158 177 104 5 11 183 7 178 5.03e-26 108
MS.gene75752.t1 AT4G01520 37.654 162 93 5 9 165 5 163 6.50e-26 105
MS.gene75752.t1 AT4G01540 38.125 160 91 5 11 165 7 163 1.14e-24 103
MS.gene75752.t1 AT4G01540 38.125 160 91 5 11 165 7 163 1.36e-24 103
MS.gene75752.t1 AT4G01540 38.125 160 91 5 11 165 7 163 1.80e-24 103
MS.gene75752.t1 AT4G28530 36.145 166 49 5 8 156 10 135 2.04e-24 102
MS.gene75752.t1 AT4G01540 38.125 160 91 5 11 165 7 163 2.25e-24 103
MS.gene75752.t1 AT5G64530 36.310 168 73 6 8 156 3 155 3.49e-24 98.2
MS.gene75752.t1 AT5G64530 42.105 133 60 5 8 138 3 120 1.12e-23 95.9
MS.gene75752.t1 AT1G02250 34.762 210 120 11 9 210 4 204 7.74e-23 98.2
MS.gene75752.t1 AT3G10490 53.750 80 33 1 84 159 2 81 2.31e-22 97.1
MS.gene75752.t1 AT3G10490 53.750 80 33 1 84 159 2 81 2.31e-22 97.1
MS.gene75752.t1 AT3G04420 36.025 161 88 5 9 162 4 156 5.59e-22 94.7
MS.gene75752.t1 AT3G04420 36.025 161 88 5 9 162 4 156 7.95e-22 95.1
MS.gene75752.t1 AT5G22380 35.897 156 91 4 8 154 5 160 8.49e-22 93.2
MS.gene75752.t1 AT3G44350 33.974 156 90 5 11 156 8 160 1.15e-21 92.8
MS.gene75752.t1 AT3G44350 38.931 131 71 5 11 135 8 135 8.96e-21 88.2
MS.gene75752.t1 AT1G01010 34.641 153 85 6 11 153 6 153 3.77e-19 88.6
MS.gene75752.t1 AT2G43000 44.318 88 45 2 73 156 2 89 1.82e-18 82.8
MS.gene75752.t1 AT1G02220 38.519 135 65 5 8 134 3 127 3.23e-18 85.5
MS.gene75752.t1 AT5G50820 36.552 145 67 6 1 136 10 138 5.27e-18 81.6
MS.gene75752.t1 AT3G56530 29.487 156 105 3 2 154 46 199 3.13e-16 79.0
MS.gene75752.t1 AT5G22290 47.059 68 33 1 90 157 2 66 3.90e-15 74.7
MS.gene75752.t1 AT3G55210 28.834 163 94 5 8 154 11 167 4.02e-15 75.1
MS.gene75752.t1 AT5G14000 30.573 157 100 3 5 157 10 161 5.65e-15 73.2
MS.gene75752.t1 AT5G14000 32.353 136 83 3 5 136 10 140 1.07e-13 68.6
MS.gene75752.t1 AT3G04430 35.075 134 70 6 14 134 6 135 3.18e-11 62.4

Find 91 sgRNAs with CRISPR-Local

Find 206 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGAATACTTACAAGAAAAT+TGG 0.239923 4.2:-70102881 MS.gene75752:CDS
ATAAGTTGTTTCACTATAAT+AGG 0.269347 4.2:+70101826 None:intergenic
GAGCAACAAATGCAGGGTTT+TGG 0.295401 4.2:-70102931 MS.gene75752:CDS
AGGTATCAAGTTTCAGAATC+TGG 0.305736 4.2:-70101763 MS.gene75752:CDS
TTCTAATGGCGGTGTGCCAC+CGG 0.345325 4.2:-70104634 MS.gene75752:CDS
AAGATGGATGGGTGGTATGC+AGG 0.347766 4.2:-70102164 MS.gene75752:CDS
CTTCACTCCCAATCTTGAAT+AGG 0.355765 4.2:+70102124 None:intergenic
TTGTGAACCACCTCAAGAAA+TGG 0.360627 4.2:-70101725 MS.gene75752:CDS
TGAAAGCTGATTGATTTGAT+TGG 0.364349 4.2:+70101600 None:intergenic
CAGGAAGAGACAAGTGCATT+AGG 0.383725 4.2:-70102901 MS.gene75752:CDS
TATTAGTCCTTGACCCTGTT+GGG 0.386089 4.2:+70102954 None:intergenic
GTTGAGGCTGGGGTTGGGAG+TGG 0.389288 4.2:+70101902 None:intergenic
TAGAGGTTGAGGCTGGGGTT+GGG 0.397901 4.2:+70101897 None:intergenic
GTAGAGGTTGAGGCTGGGGT+TGG 0.413911 4.2:+70101896 None:intergenic
CTATTAGTCCTTGACCCTGT+TGG 0.415287 4.2:+70102953 None:intergenic
CTCATGGACAAAAGACTGAT+TGG 0.417162 4.2:-70102820 MS.gene75752:CDS
GCCTGTAGAGGTTGAGGCTG+GGG 0.418162 4.2:+70101892 None:intergenic
TCTAATGGCGGTGTGCCACC+GGG 0.432129 4.2:-70104633 MS.gene75752:CDS
GAAAGCTGATTGATTTGATT+GGG 0.434532 4.2:+70101601 None:intergenic
ACTAATAGAGCAACAAATGC+AGG 0.444998 4.2:-70102938 MS.gene75752:CDS
AAGGACAGAAAGTACCCAAC+AGG 0.454734 4.2:-70102968 MS.gene75752:CDS
GAGGAAATATTGTTCATTTG+TGG 0.454849 4.2:+70102078 None:intergenic
TAGAGTATGAGTTCTTCTAA+TGG 0.457341 4.2:-70104648 None:intergenic
TCAGAATCTGGCATTGAAGT+TGG 0.458946 4.2:-70101751 MS.gene75752:CDS
ATGAATGGGGAATGCTTGAT+AGG 0.460214 4.2:-70101675 MS.gene75752:CDS
CTTGAACAAGATGGAACCTT+GGG 0.472651 4.2:-70104511 MS.gene75752:CDS
ACCCCAGCCTCAACCTCTAC+AGG 0.478031 4.2:-70101893 MS.gene75752:CDS
AGATGGATGGGTGGTATGCA+GGG 0.480498 4.2:-70102163 MS.gene75752:CDS
TAGCCTGTAGAGGTTGAGGC+TGG 0.482716 4.2:+70101890 None:intergenic
GTGGTGAAGGAATGAATGAA+TGG 0.483190 4.2:-70101690 MS.gene75752:CDS
ATAGGTTGTTCTGTTTGTAA+AGG 0.487136 4.2:+70101844 None:intergenic
AGCCTGTAGAGGTTGAGGCT+GGG 0.491178 4.2:+70101891 None:intergenic
TGTGAACCACCTCAAGAAAT+GGG 0.493376 4.2:-70101724 MS.gene75752:CDS
AATCAATCAGCTTTCATTGA+GGG 0.497186 4.2:-70101593 MS.gene75752:CDS
TGGTGAAGGAATGAATGAAT+GGG 0.502961 4.2:-70101689 MS.gene75752:CDS
CATGAATACCGTCTTGAAGA+TGG 0.503674 4.2:-70102791 MS.gene75752:CDS
GAAATGTATTTGTAGGAAGA+TGG 0.506020 4.2:-70102180 MS.gene75752:intron
GCTTTCATTGAGGGGAGAGA+TGG 0.506539 4.2:-70101584 MS.gene75752:CDS
TTTCGAGCTCGAAACCGGAT+AGG 0.515112 4.2:+70101980 None:intergenic
CCTACACCCATTTCTTGAGG+TGG 0.516209 4.2:+70101718 None:intergenic
CTTCCTACACCCATTTCTTG+AGG 0.516910 4.2:+70101715 None:intergenic
AAAAGAGGCTACAAGGTTTG+AGG 0.524109 4.2:-70101632 MS.gene75752:CDS
TTGTGGATCTTGATTGTGTG+TGG 0.525676 4.2:+70102095 None:intergenic
CGAAACCGGATAGGTTCCTA+TGG 0.529928 4.2:+70101989 None:intergenic
AAGTTAGCCTGTAGAGGTTG+AGG 0.533705 4.2:+70101886 None:intergenic
GAAGGACCGTTGATTTGTTG+AGG 0.537902 4.2:+70102059 None:intergenic
AAATCAATCAGCTTTCATTG+AGG 0.543711 4.2:-70101594 MS.gene75752:CDS
CTACCACTCTCACAATCTCT+AGG 0.544505 4.2:+70101796 None:intergenic
GAATGATGACTCCACAAAAG+AGG 0.551407 4.2:-70101647 MS.gene75752:CDS
TTCAAGATTGGGAGTGAAGG+TGG 0.552771 4.2:-70102120 MS.gene75752:CDS
TTGATAATGGAGACTAAGCT+CGG 0.553649 4.2:+70101954 None:intergenic
TGTATTTGTAGGAAGATGGA+TGG 0.554275 4.2:-70102176 MS.gene75752:intron
ACTCCACAAAAGAGGCTACA+AGG 0.557185 4.2:-70101639 MS.gene75752:CDS
AAAGAGATACATACATTGGT+AGG 0.559476 4.2:+70102761 None:intergenic
ATCAATCAGCTTTCATTGAG+GGG 0.560562 4.2:-70101592 MS.gene75752:CDS
GGTGTAGGAAGGAGTGGTGA+AGG 0.561219 4.2:-70101703 MS.gene75752:CDS
AACCACCATAGGAACCTATC+CGG 0.566236 4.2:-70101994 MS.gene75752:CDS
TGATATGGATGTTATAAGAG+AGG 0.567950 4.2:-70104538 MS.gene75752:CDS
CTCAAGAAATGGGTGTAGGA+AGG 0.571055 4.2:-70101714 MS.gene75752:CDS
GAAATGGGTGTAGGAAGGAG+TGG 0.573489 4.2:-70101709 MS.gene75752:CDS
AGAGGTGGACTTGAACAAGA+TGG 0.584582 4.2:-70104520 MS.gene75752:CDS
AATCCTAGAGATTGTGAGAG+TGG 0.585606 4.2:-70101799 MS.gene75752:CDS
GATTGTGAGAGTGGTAGTGA+TGG 0.586886 4.2:-70101790 MS.gene75752:CDS
TGAAGTAACTCTTCATCGGT+CGG 0.589383 4.2:+70104597 None:intergenic
GTAATGAAGTAACTCTTCAT+CGG 0.589466 4.2:+70104593 None:intergenic
TACAAAGGCAGAGCTCCTCA+TGG 0.591624 4.2:-70102836 MS.gene75752:CDS
ACTTGAACAAGATGGAACCT+TGG 0.595484 4.2:-70104512 MS.gene75752:CDS
CTATTCAAGATTGGGAGTGA+AGG 0.598153 4.2:-70102123 MS.gene75752:CDS
AACAACATCAAAACCACCAT+AGG 0.601748 4.2:-70102005 MS.gene75752:CDS
TAATCAAAGTTAGCCTGTAG+AGG 0.606992 4.2:+70101880 None:intergenic
AAGACTCTTGTGTTCTACAA+AGG 0.611421 4.2:-70102851 MS.gene75752:CDS
ATGGAACCTTGGGACTTGCA+AGG 0.612104 4.2:-70104501 MS.gene75752:intron
GAAAGTACCCAACAGGGTCA+AGG 0.612193 4.2:-70102961 MS.gene75752:CDS
TGATAATGGAGACTAAGCTC+GGG 0.612739 4.2:+70101955 None:intergenic
CCACCTCAAGAAATGGGTGT+AGG 0.613141 4.2:-70101718 MS.gene75752:CDS
TATGGATGTTATAAGAGAGG+TGG 0.621522 4.2:-70104535 MS.gene75752:CDS
CTAATAGAGCAACAAATGCA+GGG 0.623645 4.2:-70102937 MS.gene75752:CDS
AGAGTGGTAGTGATGGTTTG+AGG 0.624748 4.2:-70101783 MS.gene75752:CDS
AACCGGATAGGTTCCTATGG+TGG 0.626386 4.2:+70101992 None:intergenic
GTATTTGTAGGAAGATGGAT+GGG 0.647842 4.2:-70102175 MS.gene75752:intron
GTCGGATGAAATCGAAACCC+CGG 0.647907 4.2:+70104615 None:intergenic
GATCATTGCCATCTTCAAGA+CGG 0.649154 4.2:+70102783 None:intergenic
ATATTTCCTCAACAAATCAA+CGG 0.660597 4.2:-70102065 MS.gene75752:CDS
GTGGTATTTCTTCAGTCACA+AGG 0.667084 4.2:-70102987 MS.gene75752:CDS
AGTATGAGTTCTTCTAATGG+CGG 0.674587 4.2:-70104645 MS.gene75752:CDS
CTAATGGCGGTGTGCCACCG+GGG 0.679366 4.2:-70104632 MS.gene75752:CDS
TTTGTAGGAAGATGGATGGG+TGG 0.681897 4.2:-70102172 MS.gene75752:intron
GGTGAAGGAATGAATGAATG+GGG 0.696621 4.2:-70101688 MS.gene75752:CDS
GATCGACACCACAAAACGAG+TGG 0.701290 4.2:-70103006 MS.gene75752:CDS
AGGACAGAAAGTACCCAACA+GGG 0.718761 4.2:-70102967 MS.gene75752:CDS
GGATGAAATCGAAACCCCGG+TGG 0.740489 4.2:+70104618 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTCTTTATTTTGAAT+GGG + chr4.2:70103005-70103024 None:intergenic 10.0%
!! CTAAAAAAAAAAAACATGAA+AGG + chr4.2:70102021-70102040 None:intergenic 15.0%
!!! CTAATTTTTGCTTATATTTT+TGG + chr4.2:70103493-70103512 None:intergenic 15.0%
!!! GTTTTTTTCTTTATTTTGAA+TGG + chr4.2:70103006-70103025 None:intergenic 15.0%
!!! TTCATGTTTTTTTTTTTTAG+TGG - chr4.2:70102021-70102040 MS.gene75752:CDS 15.0%
!! AAATATTATCATGAAGAGTT+TGG - chr4.2:70102828-70102847 MS.gene75752:CDS 20.0%
!! AATTGTGGATGAATTTAATA+TGG + chr4.2:70102807-70102826 None:intergenic 20.0%
!! ATGCATAAAATATGTATGTT+TGG + chr4.2:70102061-70102080 None:intergenic 20.0%
!! CAGATAAACACAATAATATA+TGG + chr4.2:70101910-70101929 None:intergenic 20.0%
!! TAAAAAAGGAAATAGATGTA+AGG + chr4.2:70102721-70102740 None:intergenic 20.0%
!! TACACTACATGTATATAAAA+GGG - chr4.2:70101838-70101857 MS.gene75752:CDS 20.0%
!! TATCTGTATCCAAATTTAAT+TGG - chr4.2:70101924-70101943 MS.gene75752:CDS 20.0%
!! TATGAATGAAATGTATTTGT+AGG - chr4.2:70104013-70104032 MS.gene75752:intron 20.0%
!! TCACATTAGATAAAACATTT+AGG + chr4.2:70102646-70102665 None:intergenic 20.0%
!! TCATGATAATATTTCAATTG+TGG + chr4.2:70102822-70102841 None:intergenic 20.0%
!! TCATTACTATTTGAAAAAGA+AGG - chr4.2:70101623-70101642 MS.gene75752:CDS 20.0%
!! TGACAAAAGTTACAATTTAT+GGG + chr4.2:70103765-70103784 None:intergenic 20.0%
!! TGCATAAAATATGTATGTTT+GGG + chr4.2:70102060-70102079 None:intergenic 20.0%
!! TTAAACTAATGTAATCGATT+TGG + chr4.2:70102374-70102393 None:intergenic 20.0%
!! TTACACTACATGTATATAAA+AGG - chr4.2:70101837-70101856 MS.gene75752:CDS 20.0%
!! TTAGTAAACACTACAAATTA+TGG + chr4.2:70103133-70103152 None:intergenic 20.0%
!! TTGACAAAAGTTACAATTTA+TGG + chr4.2:70103766-70103785 None:intergenic 20.0%
!! TTTATCTAATGTGAACAAAA+GGG - chr4.2:70102652-70102671 MS.gene75752:intron 20.0%
!!! ACTCATTTTTGTGTATATTT+TGG - chr4.2:70103571-70103590 MS.gene75752:intron 20.0%
!!! ATAAGTTGTTTCACTATAAT+AGG + chr4.2:70104377-70104396 None:intergenic 20.0%
!!! ATACATTTTGTTTAAGTTTC+TGG - chr4.2:70103107-70103126 MS.gene75752:intron 20.0%
!!! ATCCATATCAAATTTTTGAA+AGG + chr4.2:70101652-70101671 None:intergenic 20.0%
!!! ATTTAAAATTTGTTACAACG+TGG + chr4.2:70103673-70103692 None:intergenic 20.0%
!!! CTCATTTTTGTGTATATTTT+GGG - chr4.2:70103572-70103591 MS.gene75752:intron 20.0%
!!! CTTATTTAACTTTAGTGTTT+GGG - chr4.2:70101737-70101756 MS.gene75752:CDS 20.0%
!!! TCTTATTTAACTTTAGTGTT+TGG - chr4.2:70101736-70101755 MS.gene75752:CDS 20.0%
!!! TTTAAAATTTGTTACAACGT+GGG + chr4.2:70103672-70103691 None:intergenic 20.0%
!!! TTTTATCTAATGTGAACAAA+AGG - chr4.2:70102651-70102670 MS.gene75752:intron 20.0%
!!! TTTTCTTTTTTGACAAAGTT+TGG + chr4.2:70102342-70102361 None:intergenic 20.0%
!!! TTTTTGCTTATATTTTTGGA+CGG + chr4.2:70103489-70103508 None:intergenic 20.0%
! AAGAAAAACCTATTCAAGAT+TGG - chr4.2:70104068-70104087 MS.gene75752:intron 25.0%
! ACAAAAGTTACAATTTATGG+GGG + chr4.2:70103763-70103782 None:intergenic 25.0%
! AGAAAAACCTATTCAAGATT+GGG - chr4.2:70104069-70104088 MS.gene75752:intron 25.0%
! AGGAATACTTACAAGAAAAT+TGG - chr4.2:70103319-70103338 MS.gene75752:intron 25.0%
! ATATTTCCTCAACAAATCAA+CGG - chr4.2:70104135-70104154 MS.gene75752:intron 25.0%
! GACAAAAGTTACAATTTATG+GGG + chr4.2:70103764-70103783 None:intergenic 25.0%
! GCATAAAATATGTATGTTTG+GGG + chr4.2:70102059-70102078 None:intergenic 25.0%
! GTATCCAAATTTAATTGGTT+AGG - chr4.2:70101929-70101948 MS.gene75752:CDS 25.0%
! GTCCTTTCAAAAATTTGATA+TGG - chr4.2:70101647-70101666 MS.gene75752:CDS 25.0%
! TCATCCTAACCAATTAAATT+TGG + chr4.2:70101936-70101955 None:intergenic 25.0%
!! ATTTTTGTATCTCAAAACGT+TGG - chr4.2:70102400-70102419 MS.gene75752:intron 25.0%
!! GATAGATGTTTGACAATTTT+GGG + chr4.2:70103826-70103845 None:intergenic 25.0%
!! GGTGAAGTATTTAACATATA+CGG + chr4.2:70103467-70103486 None:intergenic 25.0%
!! TGATAGATGTTTGACAATTT+TGG + chr4.2:70103827-70103846 None:intergenic 25.0%
!!! TGTTTTTTTTTTTTAGTGGC+CGG - chr4.2:70102025-70102044 MS.gene75752:CDS 25.0%
!!! TTTTAATTGTAAGAGACCTA+AGG + chr4.2:70102169-70102188 None:intergenic 25.0%
!!! TTTTGCTTATATTTTTGGAC+GGG + chr4.2:70103488-70103507 None:intergenic 25.0%
!!! TTTTTGTGTATATTTTGGGA+CGG - chr4.2:70103576-70103595 MS.gene75752:intron 25.0%
AAAGAGATACATACATTGGT+AGG + chr4.2:70103442-70103461 None:intergenic 30.0%
AAATCAATCAGCTTTCATTG+AGG - chr4.2:70104606-70104625 MS.gene75752:CDS 30.0%
AATCAATCAGCTTTCATTGA+GGG - chr4.2:70104607-70104626 MS.gene75752:CDS 30.0%
AGTGTCAAATAGGCAATTAA+CGG + chr4.2:70103893-70103912 None:intergenic 30.0%
ATAGGTTGTTCTGTTTGTAA+AGG + chr4.2:70104359-70104378 None:intergenic 30.0%
ATGGAGGAAATTAACGAATA+GGG + chr4.2:70103854-70103873 None:intergenic 30.0%
CAGTTATTACAAAGCATGAA+AGG + chr4.2:70102119-70102138 None:intergenic 30.0%
CTACGAACTCCTTTATAATT+TGG - chr4.2:70103025-70103044 MS.gene75752:intron 30.0%
GAAATGTATTTGTAGGAAGA+TGG - chr4.2:70104020-70104039 MS.gene75752:intron 30.0%
GAGGAAATATTGTTCATTTG+TGG + chr4.2:70104125-70104144 None:intergenic 30.0%
GATGTAGGACCAAATTATAA+AGG + chr4.2:70103037-70103056 None:intergenic 30.0%
GTAATGAAGTAACTCTTCAT+CGG + chr4.2:70101610-70101629 None:intergenic 30.0%
TATCTTGTCATCTTAACCTT+GGG + chr4.2:70102142-70102161 None:intergenic 30.0%
TGATATGGATGTTATAAGAG+AGG - chr4.2:70101662-70101681 MS.gene75752:CDS 30.0%
TGCACAGAAAAATGTAAGAT+TGG - chr4.2:70103172-70103191 MS.gene75752:intron 30.0%
TTATCTTGTCATCTTAACCT+TGG + chr4.2:70102143-70102162 None:intergenic 30.0%
TTATTTATGCTAGTCGATGT+AGG + chr4.2:70103052-70103071 None:intergenic 30.0%
TTGAAAGTTTGGTAGGAAAA+GGG + chr4.2:70102617-70102636 None:intergenic 30.0%
TTGTTATGACAGTGCATAAA+AGG + chr4.2:70101991-70102010 None:intergenic 30.0%
TTTGAAAGTTTGGTAGGAAA+AGG + chr4.2:70102618-70102637 None:intergenic 30.0%
! ACCTCTGAAAAAGTTTCAAA+AGG + chr4.2:70102784-70102803 None:intergenic 30.0%
! ACTTTTGTATCTCAAAACGT+TGG + chr4.2:70102434-70102453 None:intergenic 30.0%
! TAAGTTTTGCGAAATTCAAC+AGG + chr4.2:70103793-70103812 None:intergenic 30.0%
! TTGATTTTCTCTTTGCATGA+AGG + chr4.2:70104162-70104181 None:intergenic 30.0%
!! GAAAGCTGATTGATTTGATT+GGG + chr4.2:70104602-70104621 None:intergenic 30.0%
!! TGAAAGCTGATTGATTTGAT+TGG + chr4.2:70104603-70104622 None:intergenic 30.0%
!!! ACCTTTTGAAACTTTTTCAG+AGG - chr4.2:70102780-70102799 MS.gene75752:CDS 30.0%
!!! AGTTTTGCAAGTGTTGATAA+TGG + chr4.2:70104262-70104281 None:intergenic 30.0%
!!! GTTTTTTTTTTTTAGTGGCC+GGG - chr4.2:70102026-70102045 MS.gene75752:CDS 30.0%
!!! TTTTTTTTTTTTAGTGGCCG+GGG - chr4.2:70102027-70102046 MS.gene75752:CDS 30.0%
AAAAGTCATGCCACATCATA+GGG - chr4.2:70103926-70103945 MS.gene75752:intron 35.0%
AACAACATCAAAACCACCAT+AGG - chr4.2:70104195-70104214 MS.gene75752:intron 35.0%
AAGACTCTTGTGTTCTACAA+AGG - chr4.2:70103349-70103368 MS.gene75752:intron 35.0%
ACTAATAGAGCAACAAATGC+AGG - chr4.2:70103262-70103281 MS.gene75752:intron 35.0%
AGGTATCAAGTTTCAGAATC+TGG - chr4.2:70104437-70104456 MS.gene75752:intron 35.0%
ATCAATCAGCTTTCATTGAG+GGG - chr4.2:70104608-70104627 MS.gene75752:CDS 35.0%
CTAATAGAGCAACAAATGCA+GGG - chr4.2:70103263-70103282 MS.gene75752:intron 35.0%
GATGACAAGATAATTGCCTT+AGG - chr4.2:70102150-70102169 MS.gene75752:CDS 35.0%
GATGGAGGAAATTAACGAAT+AGG + chr4.2:70103855-70103874 None:intergenic 35.0%
GCAAATTCAAGATGTACGAA+AGG + chr4.2:70102959-70102978 None:intergenic 35.0%
GGAGAAAGAGATACATACAT+TGG + chr4.2:70103446-70103465 None:intergenic 35.0%
GGGGTAATTGACTATTTACT+CGG + chr4.2:70103744-70103763 None:intergenic 35.0%
GTATTTGTAGGAAGATGGAT+GGG - chr4.2:70104025-70104044 MS.gene75752:intron 35.0%
GTCTTGAGCTTTCATAGTTA+GGG - chr4.2:70102880-70102899 MS.gene75752:CDS 35.0%
TATGGATGTTATAAGAGAGG+TGG - chr4.2:70101665-70101684 MS.gene75752:CDS 35.0%
TGGTGAAGGAATGAATGAAT+GGG - chr4.2:70104511-70104530 MS.gene75752:CDS 35.0%
TGTATTTGTAGGAAGATGGA+TGG - chr4.2:70104024-70104043 MS.gene75752:intron 35.0%
TGTCTTGAGCTTTCATAGTT+AGG - chr4.2:70102879-70102898 MS.gene75752:CDS 35.0%
TTAGGCTCTGTTTGAAAGTT+TGG + chr4.2:70102628-70102647 None:intergenic 35.0%
TTATGACAGTGCATAAAAGG+AGG + chr4.2:70101988-70102007 None:intergenic 35.0%
! AAGAAATACCACTCGTTTTG+TGG + chr4.2:70103205-70103224 None:intergenic 35.0%
! TAATCAAAGTTAGCCTGTAG+AGG + chr4.2:70104323-70104342 None:intergenic 35.0%
! TCGTACATCTTGAATTTGCT+TGG - chr4.2:70102960-70102979 MS.gene75752:CDS 35.0%
!! TATCATGAAGAGTTTGGTGT+TGG - chr4.2:70102834-70102853 MS.gene75752:CDS 35.0%
!! TTGATAATGGAGACTAAGCT+CGG + chr4.2:70104249-70104268 None:intergenic 35.0%
AAAAGAGGCTACAAGGTTTG+AGG - chr4.2:70104568-70104587 MS.gene75752:CDS 40.0%
AAAGTCATGCCACATCATAG+GGG - chr4.2:70103927-70103946 MS.gene75752:intron 40.0%
AAAGTTTGGTAGGAAAAGGG+AGG + chr4.2:70102614-70102633 None:intergenic 40.0%
AAGTTTGGTAGGAAAAGGGA+GGG + chr4.2:70102613-70102632 None:intergenic 40.0%
AATCCTAGAGATTGTGAGAG+TGG - chr4.2:70104401-70104420 MS.gene75752:intron 40.0%
ACTTGAACAAGATGGAACCT+TGG - chr4.2:70101688-70101707 MS.gene75752:CDS 40.0%
AGTCAATAACCCCTATGATG+TGG + chr4.2:70103939-70103958 None:intergenic 40.0%
ATGAATGGGGAATGCTTGAT+AGG - chr4.2:70104525-70104544 MS.gene75752:CDS 40.0%
CATGAATACCGTCTTGAAGA+TGG - chr4.2:70103409-70103428 MS.gene75752:intron 40.0%
CTATTCAAGATTGGGAGTGA+AGG - chr4.2:70104077-70104096 MS.gene75752:intron 40.0%
CTCATGGACAAAAGACTGAT+TGG - chr4.2:70103380-70103399 MS.gene75752:intron 40.0%
CTTCACTCCCAATCTTGAAT+AGG + chr4.2:70104079-70104098 None:intergenic 40.0%
CTTGAACAAGATGGAACCTT+GGG - chr4.2:70101689-70101708 MS.gene75752:CDS 40.0%
GAAAAGTCATGCCACATCAT+AGG - chr4.2:70103925-70103944 MS.gene75752:intron 40.0%
GAATGATGACTCCACAAAAG+AGG - chr4.2:70104553-70104572 MS.gene75752:CDS 40.0%
GATCATTGCCATCTTCAAGA+CGG + chr4.2:70103420-70103439 None:intergenic 40.0%
GCAACTCTACAAAATTACGC+AGG + chr4.2:70102911-70102930 None:intergenic 40.0%
GCTCTGTTTGAAAGTTTGGT+AGG + chr4.2:70102624-70102643 None:intergenic 40.0%
GGTGAAGGAATGAATGAATG+GGG - chr4.2:70104512-70104531 MS.gene75752:CDS 40.0%
GTGGTATTTCTTCAGTCACA+AGG - chr4.2:70103213-70103232 MS.gene75752:intron 40.0%
GTGGTGAAGGAATGAATGAA+TGG - chr4.2:70104510-70104529 MS.gene75752:CDS 40.0%
TATTAGTCCTTGACCCTGTT+GGG + chr4.2:70103249-70103268 None:intergenic 40.0%
TGAAGTAACTCTTCATCGGT+CGG + chr4.2:70101606-70101625 None:intergenic 40.0%
TGCTTTGTAATAACTGCCCA+AGG - chr4.2:70102123-70102142 MS.gene75752:CDS 40.0%
TGTGAACCACCTCAAGAAAT+GGG - chr4.2:70104476-70104495 MS.gene75752:intron 40.0%
TTGTGAACCACCTCAAGAAA+TGG - chr4.2:70104475-70104494 MS.gene75752:intron 40.0%
TTGTGGATCTTGATTGTGTG+TGG + chr4.2:70104108-70104127 None:intergenic 40.0%
TTTAGGAGGGATGAGATTAG+AGG + chr4.2:70102585-70102604 None:intergenic 40.0%
! AAACCTTGTAGCCTCTTTTG+TGG + chr4.2:70104567-70104586 None:intergenic 40.0%
! ATTTTACCTTGCAAGTCCCA+AGG + chr4.2:70101708-70101727 None:intergenic 40.0%
! CAATCAGTCTTTTGTCCATG+AGG + chr4.2:70103382-70103401 None:intergenic 40.0%
! TCAGAATCTGGCATTGAAGT+TGG - chr4.2:70104449-70104468 MS.gene75752:intron 40.0%
! TGAGCATAACTCAGTTGGTA+AGG + chr4.2:70102087-70102106 None:intergenic 40.0%
!! TGATAATGGAGACTAAGCTC+GGG + chr4.2:70104248-70104267 None:intergenic 40.0%
!!! AGATGGATTTTTGGGGCTAT+GGG - chr4.2:70104633-70104652 MS.gene75752:CDS 40.0%
AACCACCATAGGAACCTATC+CGG - chr4.2:70104206-70104225 MS.gene75752:intron 45.0%
ACCATGTGGCAGTGTCAAAT+AGG + chr4.2:70103903-70103922 None:intergenic 45.0%
ACTCCACAAAAGAGGCTACA+AGG - chr4.2:70104561-70104580 MS.gene75752:CDS 45.0%
AGTTTGGTAGGAAAAGGGAG+GGG + chr4.2:70102612-70102631 None:intergenic 45.0%
CAGGAAGAGACAAGTGCATT+AGG - chr4.2:70103299-70103318 MS.gene75752:intron 45.0%
CTACCACTCTCACAATCTCT+AGG + chr4.2:70104407-70104426 None:intergenic 45.0%
CTATTAGTCCTTGACCCTGT+TGG + chr4.2:70103250-70103269 None:intergenic 45.0%
CTCAAGAAATGGGTGTAGGA+AGG - chr4.2:70104486-70104505 MS.gene75752:intron 45.0%
CTTCCTACACCCATTTCTTG+AGG + chr4.2:70104488-70104507 None:intergenic 45.0%
TCTCGTGAGCATAACTCAGT+TGG + chr4.2:70102092-70102111 None:intergenic 45.0%
TTCAAGATTGGGAGTGAAGG+TGG - chr4.2:70104080-70104099 MS.gene75752:intron 45.0%
TTTGTAGGAAGATGGATGGG+TGG - chr4.2:70104028-70104047 MS.gene75752:intron 45.0%
! AAGTTAGCCTGTAGAGGTTG+AGG + chr4.2:70104317-70104336 None:intergenic 45.0%
! AGAGGTGGACTTGAACAAGA+TGG - chr4.2:70101680-70101699 MS.gene75752:CDS 45.0%
! AGAGTGGTAGTGATGGTTTG+AGG - chr4.2:70104417-70104436 MS.gene75752:intron 45.0%
! GAGCAACAAATGCAGGGTTT+TGG - chr4.2:70103269-70103288 MS.gene75752:intron 45.0%
! GATTGTGAGAGTGGTAGTGA+TGG - chr4.2:70104410-70104429 MS.gene75752:intron 45.0%
! GCATGACTTTTCTGACCATG+TGG + chr4.2:70103917-70103936 None:intergenic 45.0%
! TATGTTTGGGGTTCAAACCC+CGG + chr4.2:70102047-70102066 None:intergenic 45.0%
!! AAGGACAGAAAGTACCCAAC+AGG - chr4.2:70103232-70103251 MS.gene75752:intron 45.0%
!! AGGACAGAAAGTACCCAACA+GGG - chr4.2:70103233-70103252 MS.gene75752:intron 45.0%
!! AGGGGAGAGATGGATTTTTG+GGG - chr4.2:70104626-70104645 MS.gene75752:CDS 45.0%
!! GAAGGACCGTTGATTTGTTG+AGG + chr4.2:70104144-70104163 None:intergenic 45.0%
!! GAGGGGAGAGATGGATTTTT+GGG - chr4.2:70104625-70104644 MS.gene75752:CDS 45.0%
!! TGAGGGGAGAGATGGATTTT+TGG - chr4.2:70104624-70104643 MS.gene75752:CDS 45.0%
!!! GAGATGGATTTTTGGGGCTA+TGG - chr4.2:70104632-70104651 MS.gene75752:CDS 45.0%
!! TGAATTTATAATAATAAAAA+AGG + chr4.2:70102735-70102754 None:intergenic 5.0%
!!! ATTAAAATATTTATTTTCAT+TGG + chr4.2:70103077-70103096 None:intergenic 5.0%
AACCGGATAGGTTCCTATGG+TGG + chr4.2:70104211-70104230 None:intergenic 50.0%
AAGATGGATGGGTGGTATGC+AGG - chr4.2:70104036-70104055 MS.gene75752:intron 50.0%
AGATGGATGGGTGGTATGCA+GGG - chr4.2:70104037-70104056 MS.gene75752:intron 50.0%
ATGGAACCTTGGGACTTGCA+AGG - chr4.2:70101699-70101718 MS.gene75752:CDS 50.0%
CCACCTCAAGAAATGGGTGT+AGG - chr4.2:70104482-70104501 MS.gene75752:intron 50.0%
CCTACACCCATTTCTTGAGG+TGG + chr4.2:70104485-70104504 None:intergenic 50.0%
CCTCCATCAACATGCTGATG+TGG - chr4.2:70103867-70103886 MS.gene75752:intron 50.0%
CGAAACCGGATAGGTTCCTA+TGG + chr4.2:70104214-70104233 None:intergenic 50.0%
GAAAAGGGAGGGGAGAGTTT+AGG + chr4.2:70102602-70102621 None:intergenic 50.0%
GAAATGGGTGTAGGAAGGAG+TGG - chr4.2:70104491-70104510 MS.gene75752:intron 50.0%
GATCGACACCACAAAACGAG+TGG - chr4.2:70103194-70103213 MS.gene75752:intron 50.0%
GCCTATTTGACACTGCCACA+TGG - chr4.2:70103899-70103918 MS.gene75752:intron 50.0%
GCTTTCATTGAGGGGAGAGA+TGG - chr4.2:70104616-70104635 MS.gene75752:CDS 50.0%
GTCGGATGAAATCGAAACCC+CGG + chr4.2:70101588-70101607 None:intergenic 50.0%
TACAAAGGCAGAGCTCCTCA+TGG - chr4.2:70103364-70103383 MS.gene75752:intron 50.0%
TTTCGAGCTCGAAACCGGAT+AGG + chr4.2:70104223-70104242 None:intergenic 50.0%
! CCACATCAGCATGTTGATGG+AGG + chr4.2:70103870-70103889 None:intergenic 50.0%
!! GAAAGTACCCAACAGGGTCA+AGG - chr4.2:70103239-70103258 MS.gene75752:intron 50.0%
!!! GCAGGGTTTTGGAAAGCTAC+AGG - chr4.2:70103280-70103299 MS.gene75752:intron 50.0%
AAGGGAGGGGAGAGTTTAGG+AGG + chr4.2:70102599-70102618 None:intergenic 55.0%
AGCCTGTAGAGGTTGAGGCT+GGG + chr4.2:70104312-70104331 None:intergenic 55.0%
AGGGAGGGGAGAGTTTAGGA+GGG + chr4.2:70102598-70102617 None:intergenic 55.0%
CGGCCACATCAGCATGTTGA+TGG + chr4.2:70103873-70103892 None:intergenic 55.0%
GGATGAAATCGAAACCCCGG+TGG + chr4.2:70101585-70101604 None:intergenic 55.0%
GGTGTAGGAAGGAGTGGTGA+AGG - chr4.2:70104497-70104516 MS.gene75752:intron 55.0%
TAGAGGTTGAGGCTGGGGTT+GGG + chr4.2:70104306-70104325 None:intergenic 55.0%
TAGCCTGTAGAGGTTGAGGC+TGG + chr4.2:70104313-70104332 None:intergenic 55.0%
TTCTAATGGCGGTGTGCCAC+CGG - chr4.2:70101566-70101585 MS.gene75752:CDS 55.0%
!! GGGCTTTTCGAGCTCGAAAC+CGG + chr4.2:70104228-70104247 None:intergenic 55.0%
ACCCCAGCCTCAACCTCTAC+AGG - chr4.2:70104307-70104326 MS.gene75752:intron 60.0%
GCCTGTAGAGGTTGAGGCTG+GGG + chr4.2:70104311-70104330 None:intergenic 60.0%
GTAGAGGTTGAGGCTGGGGT+TGG + chr4.2:70104307-70104326 None:intergenic 60.0%
TCTAATGGCGGTGTGCCACC+GGG - chr4.2:70101567-70101586 MS.gene75752:CDS 60.0%
CTAATGGCGGTGTGCCACCG+GGG - chr4.2:70101568-70101587 MS.gene75752:CDS 65.0%
GTTGAGGCTGGGGTTGGGAG+TGG + chr4.2:70104301-70104320 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 70101558 70104664 70101558 ID=MS.gene75752
chr4.2 mRNA 70101558 70104664 70101558 ID=MS.gene75752.t1;Parent=MS.gene75752
chr4.2 exon 70104502 70104664 70104502 ID=MS.gene75752.t1.exon1;Parent=MS.gene75752.t1
chr4.2 CDS 70104502 70104664 70104502 ID=cds.MS.gene75752.t1;Parent=MS.gene75752.t1
chr4.2 exon 70102775 70103043 70102775 ID=MS.gene75752.t1.exon2;Parent=MS.gene75752.t1
chr4.2 CDS 70102775 70103043 70102775 ID=cds.MS.gene75752.t1;Parent=MS.gene75752.t1
chr4.2 exon 70101558 70102187 70101558 ID=MS.gene75752.t1.exon3;Parent=MS.gene75752.t1
chr4.2 CDS 70101558 70102187 70101558 ID=cds.MS.gene75752.t1;Parent=MS.gene75752.t1
Gene Sequence

>MS.gene75752

ATGAGTTCTTCTAATGGCGGTGTGCCACCGGGGTTTCGATTTCATCCGACCGATGAAGAGTTACTTCATTACTATTTGAAAAAGAAGGTGTCCTTTCAAAAATTTGATATGGATGTTATAAGAGAGGTGGACTTGAACAAGATGGAACCTTGGGACTTGCAAGGTAAAATAGCAGTTTTCTTATTTAACTTTAGTGTTTGGGCATGTTCTATATATAAGCTTTTTTCATTTTTATACAATCTTCTTTATATATAAGCTTTGAGATTGAGAATATATTAGTTACACTACATGTATATAAAAGGGATCAAAAACTAGTTAATTTTCTTTTTGTTTTGTTATCTTAATTTCTCCATATATTATTGTGTTTATCTGTATCCAAATTTAATTGGTTAGGATGATCATGTTTTCATGATTTTAATATTTACATCCTCCTTTTATGCACTGTCATAACAAAAATCAACCTTTCATGTTTTTTTTTTTTAGTGGCCGGGGTTTGAACCCCAAACATACATATTTTATGCATTGTCCTTACCAACTGAGTTATGCTCACGAGAACAACCTTTCATGCTTTGTAATAACTGCCCAAGGTTAAGATGACAAGATAATTGCCTTAGGTCTCTTACAATTAAAAGAATTTTTTTTGAAGAAAATAAATAAACTTAATGAAAATGTTTCATATTCTATTATTTTCAACTCATATTCTATTATTTTCAACACTAAAATTAATATTATATGAATAAAGATATTAAATCAATTTACTTTATTATCAATTAAAAAAAAACCAAACTTTGTCAAAAAAGAAAATAAATCAAACCAAATCGATTACATTAGTTTAATTAATAATTTTTGTATCTCAAAACGTTGGAAAATTTTCCAACGTTTTGAGATACAAAAGTTATTAATTAAACTAATGTAATTGATTTATTTTGATTTTTTCTAAGTTAAAATACATTAATCATAAGTATTTATTTATCATTATTTACAAAATCACTCTCAAATTTTTTGAAAGATTTATCTGTTTTCTCCTCTAATCTCATCCCTCCTAAACTCTCCCCTCCCTTTTCCTACCAAACTTTCAAACAGAGCCTAAATGTTTTATCTAATGTGAACAAAAGGGTTCAACAACACATTTTAATAATTTTTAGTAAATTTTAATCAAACCTTACATCTATTTCCTTTTTTATTATTATAAATTCATTTTTGATAAAAATTGTGATTGTTTACCTTTTGAAACTTTTTCAGAGGTCCATATTAAATTCATCCACAATTGAAATATTATCATGAAGAGTTTGGTGTTGGTCAACTTGCACGAAAAAGTGTTTGTCTTGAGCTTTCATAGTTAGGGTGTTACCTGCGTAATTTTGTAGAGTTGCTTATTATGCTACATCATGTTATGTACCTTTCGTACATCTTGAATTTGCTTGGTTTTAATAAATCATTTTTGCCCATTCAAAATAAAGAAAAAAACTACGAACTCCTTTATAATTTGGTCCTACATCGACTAGCATAAATAAAACCAATGAAAATAAATATTTTAATTGATAGTGTTATACATTTTGTTTAAGTTTCTGGCCATAATTTGTAGTGTTTACTAACTTTTAAATTTCTTCATGATGCACAGAAAAATGTAAGATTGGATCGACACCACAAAACGAGTGGTATTTCTTCAGTCACAAGGACAGAAAGTACCCAACAGGGTCAAGGACTAATAGAGCAACAAATGCAGGGTTTTGGAAAGCTACAGGAAGAGACAAGTGCATTAGGAATACTTACAAGAAAATTGGAATGAGAAAGACTCTTGTGTTCTACAAAGGCAGAGCTCCTCATGGACAAAAGACTGATTGGATTATGCATGAATACCGTCTTGAAGATGGCAATGATCCTACCAATGTATGTATCTCTTTCTCCGTATATGTTAAATACTTCACCCGTCCAAAAATATAAGCAAAAATTAGTCGACAAAAGTTAATGTATTTAGTTCAAAATTTATACAAAATACATCAACTTATACTGACTCATTTTTGTGTATATTTTGGGACGGAGAAGTATTGAATATCAAGTTTATAATGCACTATTCTAAAGTAAAATCATATGTGTTTAATTTTGATCTACCCACGTTGTAACAAATTTTAAATTGTATTTTAGAAGAAAGAAAAAGAAGTTTTACACTGAACAATTCATAACCGAGTAAATAGTCAATTACCCCCATAAATTGTAACTTTTGTCAAAAAACCTGTTGAATTTCGCAAAACTTAAAAAAAAAAACCCAAAATTGTCAAACATCTATCATATACCCTATTCGTTAATTTCCTCCATCAACATGCTGATGTGGCCGTTAATTGCCTATTTGACACTGCCACATGGTCAGAAAAGTCATGCCACATCATAGGGGTTATTGACTATATTTTTTATAAAAAAAAAATCTGATTTTATAAATGTTGATATGTTGATTATATATGAATGAAATGTATTTGTAGGAAGATGGATGGGTGGTATGCAGGGTGTTCAAGAAGAAAAACCTATTCAAGATTGGGAGTGAAGGTGGATCCACACACAATCAAGATCCACAAATGAACAATATTTCCTCAACAAATCAACGGTCCTTCATGCAAAGAGAAAATCAATACTTACTACATCAACAACATCAAAACCACCATAGGAACCTATCCGGTTTCGAGCTCGAAAAGCCCGAGCTTAGTCTCCATTATCAACACTTGCAAAACTCTCAATACTCAATCTTCCACTCCCAACCCCAGCCTCAACCTCTACAGGCTAACTTTGATTACTCATATGCATCACCTTTACAAACAGAACAACCTATTATAGTGAAACAACTTATGACAAATCCTAGAGATTGTGAGAGTGGTAGTGATGGTTTGAGGTATCAAGTTTCAGAATCTGGCATTGAAGTTGGCTCTTGTGAACCACCTCAAGAAATGGGTGTAGGAAGGAGTGGTGAAGGAATGAATGAATGGGGAATGCTTGATAGGCTTGTGAATGATGACTCCACAAAAGAGGCTACAAGGTTTGAGGATGCAAATCCCAATCAAATCAATCAGCTTTCATTGAGGGGAGAGATGGATTTTTGGGGCTATGGGAAACAATGA
Protein sequence

>MS.gene75752.t1

MSSSNGGVPPGFRFHPTDEELLHYYLKKKVSFQKFDMDVIREVDLNKMEPWDLQEKCKIGSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNTYKKIGMRKTLVFYKGRAPHGQKTDWIMHEYRLEDGNDPTNEDGWVVCRVFKKKNLFKIGSEGGSTHNQDPQMNNISSTNQRSFMQRENQYLLHQQHQNHHRNLSGFELEKPELSLHYQHLQNSQYSIFHSQPQPQPLQANFDYSYASPLQTEQPIIVKQLMTNPRDCESGSDGLRYQVSESGIEVGSCEPPQEMGVGRSGEGMNEWGMLDRLVNDDSTKEATRFEDANPNQINQLSLRGEMDFWGYGKQ